ID:

der_332

 Coordinate:

scaffold_4644:1250773-1250923 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.2 -7.4 -7.4 -7.4

Flybase annnotation

CDS [Dere\GG12847-cds]; exon [dere_GLEANR_12899:5]; intron [Dere\GG12847-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGCGGCGGTGGAGGCGGTGGTGGTGGCTTCCACCACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATAACCATGCACAGAAATTTATTTAAACGCCATTAATTTCTTTACACGATATTAGCTGCATCTCACAGGTGAAGTGTTCATGCTGCCATTGCCGATTTGCAGCCGATTCCCCAGCCAGCCGCATCCCGTAGGCAATGGCAATTGCCACAGCCCCCACAA
**************************************************************************.......((............((((((((.(((((((...............)))))))...............)))))......)))...))************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 GSM1528801
follicle cells		 V108
head
 M057
embryo
 V040
embryo
 V060
head
......CGGTGGAGGCGTTGGTGGG.................................................................................................................................................................................................................................. 19 2 15 11.87 178 81 81 0 11 0 0 5
......CGGTGGAGGCGTTGGTGG................................................................................................................................................................................................................................... 18 1 7 11.71 82 37 44 0 1 0 0 0
......................................................................................................................................................................................................................ATCCCGTAGGCAATGGCATTTGCCACAGC........ 29 1 1 4.00 4 0 0 4 0 0 0 0
.....TCGGTGGAGGCGTTGGTGG................................................................................................................................................................................................................................... 19 2 10 3.10 31 16 14 0 1 0 0 0
.....TCGGTGGAGGCGTTGGTGGG.................................................................................................................................................................................................................................. 20 3 20 2.40 48 30 18 0 0 0 0 0
..........................................................................CTCAAAAACCGCATCCATATA............................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0
............................................................................................................................................ATATTAGCTGCATCTCACAGGTGAAGT.................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................CACGATATTAGCTGCATCTC............................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................GGTCATGCTGCCATTGCCGATTTGC........................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0
..........................................................AATAGAACAACACGATCTCAAAA.......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................CACAGGTGAAGTGTTCAT.............................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................................................ATTAGCTGCATCTCACAGGTGAAGT.................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................TTAGCTGCATCTCACAGGTGAAGT.................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................TGCATCTCACAGGTGAAGT.................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
.....TCGGTGGAGGCGTTGGTG.................................................................................................................................................................................................................................... 18 2 20 1.00 20 17 3 0 0 0 0 0
.......................................................................................................................................................................GTTCATGCTGCCATTGCCGATTTGC........................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0
.....GCGGTGGAGGCGGTGGTGGTGGCT.............................................................................................................................................................................................................................. 24 0 2 0.50 1 0 0 0 1 0 0 0
......CGGTGGAGGCGTTGGTGGT.................................................................................................................................................................................................................................. 19 1 3 0.33 1 1 0 0 0 0 0 0
....GGCGGTGGAGGCGGTGGT..................................................................................................................................................................................................................................... 18 0 6 0.17 1 1 0 0 0 0 0 0
........GTGGAGGCGTTGGTGGGG................................................................................................................................................................................................................................. 18 2 20 0.15 3 0 3 0 0 0 0 0
........GTGGAGGCGTTGGTGGTA................................................................................................................................................................................................................................. 18 2 20 0.15 3 3 0 0 0 0 0 0
.........TGGAGGCGGTGGTGGTGG................................................................................................................................................................................................................................ 18 0 7 0.14 1 1 0 0 0 0 0 0
......CGTTGGAGGCGGTGGTGG................................................................................................................................................................................................................................... 18 1 15 0.07 1 1 0 0 0 0 0 0
.......GGTGGAGGCGTTGGTGGTA................................................................................................................................................................................................................................. 19 2 16 0.06 1 1 0 0 0 0 0 0
.......GGTGGAGGCGGTGTGGGTGG................................................................................................................................................................................................................................ 20 2 20 0.05 1 0 1 0 0 0 0 0
......CGGTGGAGGCGTTGGTGGA.................................................................................................................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0 0
......CGGTGGAGGCGTTGTTGGG.................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0
......CGGTGGAGGCGTTGCTGG................................................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

GCCGCCGCCACCTCCGCCACCACCACCGAAGGTGGTGTACCGCGTGTCTCCATCTAGTTTATCTTGTTGTGCTAGAGTTTTTGGCGTAGGTATATTGGTACGTGTCTTTAAATAAATTTGCGGTAATTAAAGAAATGTGCTATAATCGACGTAGAGTGTCCACTTCACAAGTACGACGGTAACGGCTAAACGTCGGCTAAGGGGTCGGTCGGCGTAGGGCATCCGTTACCGTTAACGGTGTCGGGGGTGTT
************************************************************************************.......((............((((((((.(((((((...............)))))))...............)))))......)))...))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 V107
male body		 V060
head
 V108
head
.........................................................................................................................................CGCTGTAATCTACGTAGAGTGT............................................................................................ 22 3 1 1.00 1 1 0 0 0
.............................................................................................ATTGGTACGTGTCTTATAA........................................................................................................................................... 19 2 4 0.25 1 0 1 0 0
....................................................................................................................................................................................................CTAAGGGTTCGGTCGGCCTG................................... 20 3 5 0.20 1 0 0 1 0
............................................................................GTGTTGGGCGTAGGTATA............................................................................................................................................................. 18 2 6 0.17 1 0 0 1 0
..........................................................................................................................................TCTATAATCCACGTAGACTG............................................................................................. 20 3 8 0.13 1 1 0 0 0
...........................................................................AGGTTTTGGGGTAGGTATA............................................................................................................................................................. 19 2 10 0.10 1 0 1 0 0
............................................................................GTATTGGGCGTAGGTATA............................................................................................................................................................. 18 2 11 0.09 1 0 0 1 0
....................................................................................................................................................................................................CAAAGGGGTCGGTCGGGCTA................................... 20 3 12 0.08 1 1 0 0 0
.................................................................GTTGGGTTAGAGTTTTTG........................................................................................................................................................................ 18 2 15 0.07 1 0 1 0 0
.........................CCGGAGGTGGTGTAGCGC................................................................................................................................................................................................................ 18 2 18 0.06 1 0 1 0 0
.....................................................................................................................................................CGTAGAGGGTCCAATTCG.................................................................................... 18 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4644:1250723-1250973 + der_332 CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCAATTGCC------A---CAGCCCCC-------ACAA
droYak3 X:1174729-1174979 + dya_1293 CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCACTTGCC------A---CAGCCCCA-------ACAA
droSec2 scaffold_10:1090469-1090718 + CGG------------------------------------CGGCGG------TGGAGGCGGTGGTG-TAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ATCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCATTTGCC------A---TAGCCCCA-------ACAA
droSim2 x:1146100-1146350 + CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ATCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCATTTGCC------A---CAGCCCCA-------ACAA
dm3 chrX:1267031-1267281 + CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCATTTGCC------A---CAGCCCCA-------ACAA
droEug1 scf7180000408973:100087-100335 - TGG------------------------------------CGGCGG------TGGAGGCGGT---GGTGGCTTTCACC---ATATGGCGCACAGAGGTAGATCTAATAGAACGACACGATCTCAAAAACCGCATCCGTATA---ACCATGCCCAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA--ATCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCGGAT----TTGAAGCCGATATG----------------CCAGCCAGCCG---------------CATCGTATAG---TCAATGGCAATTGTC------T---TTGCACCA-------ATAA
droBia1 scf7180000301760:3837338-3837596 + CGG------------------------------------CGGCGGAAACGGAGGCGGTGGCGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATCTAAATACGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCACTCGCC------A---CAGCCCCA-------ACAA
droTak1 scf7180000415289:447000-447274 + CGGAGGCAACAACAACAACAATGGAGGCGGAAACGGCAACGGCGG------CGGCGGTGGTGGTGGCAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GATATACTAGCTGCATCATCTCACAG---GTGAAGTAGTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCCCAA-T------------CA------------------------------------------GCAATTGCC------A--GCAGCAGCA-------ACGA
droEle1 scf7180000490996:87267-87517 + CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCTAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CAACCTATAG---GCAATGGCACTTGCC------A---CAGCTCCA-------GCAA
droRho1 scf7180000778087:77297-77528 + -------------------------------------------------------------GGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCTAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTTC----------------CCAGCCAGCCG---------------CAACCTGTAG---GCAATGGCACTTGCC------A---CAGCCCCA-------ACAA
droFic1 scf7180000454072:1847668-1847902 - ----------------------------------------GGCGG------TGGAGGCGGT---GGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACAGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCTCAG---GTGAA---GTGTTCATTCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CAACCTGTAG---GCAATGGCCG---------------CAA---CC-------AGAA
droKik1 scf7180000302621:207521-207869 + CGG------------------------------------CGGCGG------TGGTGGTGGTGGCGGAGGCTTCCATC---ATATGGCGCACAGAGGTAGATCAAATAGACAGACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--AACAAAAACAAACACACACAACACCAACACACACAAACACATACACGACGATGACGATGACGACGAGGACTATGACGCTCTGATCATAATATTCATTTCTTTACACAAATATATTAGCTGCA---TCTCGCAGGAGGTGAA---GTGTTCATGCTGCCATTGCCGATGAT-TTGCTGCAGCCACC---A------------G-GGGCAGCAGGAGTAACAACAGCAACAACCACA---GAGCAATGGCAA---------------------CA-------ACAA
droAna3 scaffold_13117:1857614-1857879 - CGG------------------------------------TGGCGG------CGGAGGAGCCGGTGGCAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAACAGAAACACACGATCTCAAAAACCGCATCCCTATA---ACCATGCACAGAAATTTATCTAAA--CGC--------------------------------------------------------------------------------------AATTAATCTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCCGAA-TCTGATTCCCAACCAGCCAGCCG---------------CA------AGCGAGCAATGGCAACTGCC------A---GAGCCACAGTC----ACAT
droBip1 scf7180000396425:205736-206001 + CGG------------------------------------TGGCGG------AGGAGGAGCCGGTGGCAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAACAGAAACACACGATCTCAAAAACCGCATCCCTATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------AATTAATCTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCCGAA-TCTGATTCCCAGCCAGCCAGCCG---------------CA------AGCGAGCAATGGCAACTGCC------A---GAGCCACAGTC----ACAT
dp5 XL_group1a:4782960-4783212 - TGT------------------------------------CGGTGT------CGGTGGTGGCGGTGGCGGCTACCAGC---ATATGGCGCATAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACTGCATCCATATAACAATCATGCACAGAAATTTATTTAAA-ACAC-----------------------------ACAAA--------------------------------------------------AAAATTAATTTCTTTACACCAA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGGTCATGCTGCCATTGCCACA----TTGCAGCCACTCCA----------------GCAGGCAGCCG---------------T------------GCAATGGCAGCAGCAAATTCCG---CATCC--------------
droPer2 scaffold_11:1370015-1370267 - TGT------------------------------------CGGTGT------CGGTGGTGGCGGTGGCGGCTACCAGC---ATATGGCGCATAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACTGCATCCATATAACAATCATGCACAGAAATTTATTTAAA-ACAC-----------------------------ACAAA--------------------------------------------------AAAATTAATTTCTTTACACCAA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGGTCATGCTGCCATTGCCACA----TTGCAGCCACTCCA----------------GCAGGCAGCCG---------------T------------GCAATGGCAGCAGCAAATTCCG---CATCC--------------
droWil2 scf2_1100000004963:418124-418353 + -GG------------------------------------TGGCGG------T------------GGAGGCTACCATC---ATATGGCACACAGAGGTAGATCAAATAGACAAACACGATCTCAAAAACCGCATCCATATA---ACAATGCACAGAAATTTATTTAAA-ACGC--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCAAT----TTGCAACCACTCCA----GCTGCTCC-T--ACAGCCAGGAG---------------CA--------------A-------TGCA------A---CCACCACC-------ACAA
droVir3 scaffold_13042:2617871-2618118 - dvi_14419 CGG------------------------------------CGGTGG------CGGGGGCGGCGGCGTCGGCTATCACC---ATATGGCACATAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA-ACAA--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCTATCAGAATATTGCCAATGCC----------------CCGACCACAAG---------------CACTGCAGCG---GCAGCAGCAGCAGCC------G---CAGC---------------
droMoj3 scaffold_6328:978042-978282 + CGG------------------------------------CGGCGT------C------------GGCGGCTATCACCACAATATGGCACACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA-TCAA--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCACACAG---GTGAA---GTGTTCATGCTGCCATTGCCAATCACTATAATGCCAATGCC----------------CCGACCACAAG---------------CAGA---------GCGGCTGCAGCTGCA------G---CAGCGACA-------GCAG
droGri2 scaffold_15203:5439609-5439857 - ----------------------------------------------------------------GGTGGCTATCACCCCAATATGGCCAACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATACTAACAATGTACAGAAATTTATTTAAA-ACAA--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCTATCACAGTAATGCCAATGCC----------------CCGTCCACAAG---------------CAGA---------GCTGCAGCAGCTGCAACTGTTGCAGCAGCGGCAGT-GCCTACTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCAATTGCC------A---CAGCCCCC-------ACAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................CTCAAAAACCGCATCCATATA---......................................................................................................................................................................................................................................................................................................................2111.0010001000
.....................................................................................................................................................................................................................................................................................A--TATTAGCTGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................2711.0010000100
................................................................................................................................................................................................................................................................................CAC-GA--TATTAGCTGCA---TCTC...........................................................................................................................................................2011.0011000000
.......................................................................................................AATAGAACAACACGATCTCAAAA.......................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................................................................................................................................................................................................................................................................................................CACAG---GTGAA---GTGTTCAT....................................................................................................................................1811.0010000010
.........................................................................................................................................................................................................................................................................................ATTAGCTGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................2511.0011000000
..........................................................................................................................................................................................................................................................................................TTAGCTGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................2411.0011000000
...............................................................................................................................................................................................................................................................................................TGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................1911.0010000100
...........................................................................................................................................................................................................................................................................................................................GTTCATGCTGCCATTGCCGAT----TTGC.............................................................................................................2511.0010100000
.........................................GCGG------TGGAGGCGGTGGTGGTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................2420.5010000010
........................................GGCGG------TGGAGGCGGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................1860.1711000000
...................................................TGGAGGCGGTGGTGGTGG................................................................................................................................................................................................................................................................................................................................................................................................1870.1411000000
droYak3
CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCACTTGCC------A---CAGCCCCA-------ACAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................GTTCATGCTGCCATTGCCGAC----.................................................................................................................2111.00100100000000
...................................................................................TGGCGCACAGAGGTAGATCA..............................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................................................................................................................................TGCCGAT----TTGCAGCCGATTCC----------------...................................................................................2111.00100100000000
..............................................................................................................................................................................................................................................................................................CTGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................2011.00110000000000
.........................................................................CACC---ACATGGCGCACAGAG......................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCCAGCCG---------------CATCCCGTAG---GCAATG......................................2611.00100000010000
.........................................................................................................................................................................................................................................................................................ATTAGCTGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATCCCGTAG---GCAATGGCACTTGC..............................2311.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................ATTCC----------------CCAGCCAGCCG---------------CATC.....................................................2011.00100000010000
droSec2
CGG------------------------------------CGGCGG------TGGAGGCGGTGGTG-TAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ATCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCATTTGCC------A---TAGCCCCA-------ACAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................AGCCG---------------CATCCCGTAG---GCAATGG.....................................2211.0010010
........................................................................................................................................................................................................................................................................................................TCACAG---GTGAA---GTGTTCATGCTGCC..............................................................................................................................2511.0010010
............................................................................................................................................................................................................................................................................................................................................CGAT----TTGCAGCCGATTCC----------------CCAGC..............................................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................GTTCATGCTGCCATTGCCGAT----TTGC.............................................................................................................2511.0010001
droSim2
CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ATCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCATTTGCC------A---CAGCCCCA-------ACAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................TTCTTTACAC-GA--TATTAGCTGCA---TC.............................................................................................................................................................2511.00100000000000010000
.........................................................................................................................................................................................................................................................................TTCTTTACAC-GA--TATTAGCTG....................................................................................................................................................................2111.00110000000000000000
................................................................................................................................................................................................................................................................................CAC-GA--TATTAGCTGCA---TCTCACAG---G...................................................................................................................................................2511.00100000010000000000
...........................................................................................AGAGGTAGATCAAATAGAACAAC...................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
..G------------------------------------CGGCGG------TGGAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................15140.07100000000000010000
dm3
CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCATTTGCC------A---CAGCCCCA-------ACAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................AGAACAACACGATCTCAAAAACCGC..................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGCTGCCATTGCCGAT----TT...............................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AAATAGAACAACACGATCTCAAAAA......................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................ACATGGCGCACAGAGGTAGATC...............................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGAT----TTGCAGCCGAT......................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AATTTCTTTACAC-GA--TATTAGCTGC...................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AACACGATCTCAAAAACCGCATC...............................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AGAACAACACGATCTCAAAAACCGCATCC..............................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGCTGCA---TCTCACAG---GTGAA---GTGTT.......................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................ACATGGCGCACAGAGGTAG..................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGAA---GTGTTCATGCTGCCATTGCCGA......................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000
.......................................................................TCCACC---ACATGGCGCACAGAGGTAGA.................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000
.....................................................................CTTCCACC---ACATGGCGCACAGAGGT....................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGCTGCCATTGCCGAT----TTG..............................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................A---TCTCACAG---GTGAA---GTGT........................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000
....................................................................................................TCAAATAGAACAACACGATCTCAAAA.......................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................AGCCG---------------CATCCCGTAG---GCAATGGC....................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................G---GTGAA---GTGTTCATGCTGC...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................CGCACAGAGGTAGATCAAATAGAA.......................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCGAT----TTGCAGCCGATTCC----------------CC.................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CTGCCATTGCCGAT----TTGCAGT..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTCTTTACAC-GA--TATTAGCTGCA---...............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................ACAC-GA--TATTAGCTGCA---TCTCA..........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACAGAGGTAGATCAAATAGAAC......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GAA---GTGTTCATGCTGCCATTGCCGA......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AGATCAAATAGAACAACACGATCT............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................G---GTGAA---GTGTTCATGCTGCC..............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CA.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATGGCGCACAGAGGTAGATCAAATA..........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................CACAG---GTGAA---GTGTTCATGCT.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................C-GA--TATTAGCTGCA---TCTCA..........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CTGCCATTGCCGAT----TTGCAGCCGAT......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................CATGGCGCACAGAGGTAGATCA..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................GAT----TTGCAGCCGATTCC----------------CCAGC..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGGCGG------TGGAGGCGGTGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCCAGCCG---------------CATCCCGTAG---GC..........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ACC---ACATGGCGCACAGAG......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................................................................................................................ACACGATCTCAAAAACCGCA.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TATTAGCTGCA---TCTCACAG---G...................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--T............................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATGGCGCACAGAGGTAGA.................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AAATAGAACAACACGATCTCAAAAACCG...................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCCGTAG---GCAATGGCATTTGCC------A---CA.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TTTACAC-GA--TATTAGCTGCA---T..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.GG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTA.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCACAG---GTGAA---GTGTTCATGC..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................ACAC-GA--TATTAGCTGCA---TCTC...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAG---GCAATGGCATTTGCC------A---...................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCTCACAG---GTGAA---GTGTTCATGC..................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ATTAGCTGCA---TCTCACAG---GT..................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TAGCTGCA---TCTCACAG---GTGAA---GTGT........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................TAGAACAACACGATCTCAAAAACCGCA.................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTCTTTACAC-GA--TATTAGCTGCA---T..............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CC---ACATGGCGCACAGAGGTAGATCAAA............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTAACTTCCACC---ACATGGC..............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................AGAACAACACGATCTCAAAAACC....................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GAA---GTGTTCATGCTGCCATTGCCG.......................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTCCACC---ACATGGCGCACAGAG......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAG---GTGAA---GTGTTCATGCT.................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTCTTTACAC-GA--TATTAGCTGCA---TC.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................A--TATTAGCTGCA---TCTCACCC---....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................TGGCGCACAGAGGTAGATCA..............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................ACAC-GA--TATTAGCTGCA---TCTCACAG---G...................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CAGAGGTAGATCAAATAGAAC......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATGGCGCACAGAGGTAGATC...............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAA........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATCCCGTAG---GCAATGGCATTTGTA------.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTCTTTACAC-GA--TATTAGCTGC...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGG------TGGAGGCGGTGGTGGG..................................................................................................................................................................................................................................................................................................................................................................................................1980.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000010000000000000000000000000000000000000
..........................................CGG------TGGAGGCGGTGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................1840.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000
CGG------------------------------------CGGCGG------TGGAGGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................GG------TGGAGGCGGTGGTGGT..................................................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................G------TGGAGGCGGTGGTGGTAG................................................................................................................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GG------TGGAGGCGGTGGTGGTATA...............................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droEug1
TGG------------------------------------CGGCGG------TGGAGGCGGT---GGTGGCTTTCACC---ATATGGCGCACAGAGGTAGATCTAATAGAACGACACGATCTCAAAAACCGCATCCGTATA---ACCATGCCCAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA--ATCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCGGAT----TTGAAGCCGATATG----------------CCAGCCAGCCG---------------CATCGTATAG---TCAATGGCAATTGTC------T---TTGCACCA-------ATAASizeHit CountTotal NormTotal
No Reads
droBia1
CGG------------------------------------CGGCGGAAACGGAGGCGGTGGCGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATCTAAATACGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CATCCCGTAG---GCAATGGCACTCGCC------A---CAGCCCCA-------ACAASizeHit CountTotal NormTotal
No Reads
droTak1
CGGAGGCAACAACAACAACAATGGAGGCGGAAACGGCAACGGCGG------CGGCGGTGGTGGTGGCAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GATATACTAGCTGCATCATCTCACAG---GTGAAGTAGTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCCCAA-T------------CA------------------------------------------GCAATTGCC------A--GCAGCAGCA-------ACGASizeHit CountTotal NormTotal
No Reads
droEle1
CGG------------------------------------CGGCGG------TGGAGGCGGTGGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCTAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CAACCTATAG---GCAATGGCACTTGCC------A---CAGCTCCA-------GCAASizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------------------------------------------GGTGGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCTAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTTC----------------CCAGCCAGCCG---------------CAACCTGTAG---GCAATGGCACTTGCC------A---CAGCCCCA-------ACAASizeHit CountTotal NormTotal
No Reads
droFic1
----------------------------------------GGCGG------TGGAGGCGGT---GGTGGCTTCCACC---ACATGGCGCACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACAGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------CATTAATTTCTTTACAC-GA--TATTAGCTGCA---TCTCTCAG---GTGAA---GTGTTCATTCTGCCATTGCCGAT----TTGCAGCCGATTCC----------------CCAGCCAGCCG---------------CAACCTGTAG---GCAATGGCCG---------------CAA---CC-------AGAASizeHit CountTotal NormTotal
No Reads
droKik1
CGG------------------------------------CGGCGG------TGGTGGTGGTGGCGGAGGCTTCCATC---ATATGGCGCACAGAGGTAGATCAAATAGACAGACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA--AACAAAAACAAACACACACAACACCAACACACACAAACACATACACGACGATGACGATGACGACGAGGACTATGACGCTCTGATCATAATATTCATTTCTTTACACAAATATATTAGCTGCA---TCTCGCAGGAGGTGAA---GTGTTCATGCTGCCATTGCCGATGAT-TTGCTGCAGCCACC---A------------G-GGGCAGCAGGAGTAACAACAGCAACAACCACA---GAGCAATGGCAA---------------------CA-------ACAASizeHit CountTotal NormTotal
No Reads
droAna3
CGG------------------------------------TGGCGG------CGGAGGAGCCGGTGGCAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAACAGAAACACACGATCTCAAAAACCGCATCCCTATA---ACCATGCACAGAAATTTATCTAAA--CGC--------------------------------------------------------------------------------------AATTAATCTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCCGAA-TCTGATTCCCAACCAGCCAGCCG---------------CA------AGCGAGCAATGGCAACTGCC------A---GAGCCACAGTC----ACATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................GGCGCACAGAGGTAGATC...............................................................................................................................................................................................................................................................................................................................................................1811.001000001
....................................................................................................TCAAACAGAAACACACGATCT............................................................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................CGCACAGAGGTAGATCAAACA..........................................................................................................................................................................................................................................................................................................................................................2111.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACTGCC------A---GAGCCACAGTC----....2211.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTGCC------A---GAGCCACAGTC----AC..2311.001010000
.........................................................................................................................................................................................................................................................................................................................GTGTTCATGCTGCCATTGCC........................................................................................................................2011.001001000
.....................................................................................................................................................................................................................................................................................................................................................TGCAGCCGATTCCGAA-TCTGATTCC......................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................A---TCTCACAG---GTGAA---GTGTTCATGC..................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................ATTAGCTGCA---TCTCACAG---GTGAA---GT..........................................................................................................................................2511.001000001
.........................................................................................................................................................................................................................................................................................................................GTGTTCATGCTGCCATTGC.........................................................................................................................1911.001010000
...........................................................................CC---ACATGGCGCACAGAGGTAGATC...............................................................................................................................................................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGAT----TTGCA............................................................................................................2011.001001000
.............................................................................................................................................................................................................................................................................................................................................................................CCCAACCAGCCAGCCG---------------CA------AGCGAGCAA........................................2711.001000001
.......................................................................................................................................................................................................................................................................................................................................................CAGCCGATTCCGAA-TCTGATTCCCA....................................................................................2511.001100000
....................................................................................................................................................GCACAGAAATTTATCTAAA--CGC--------------------------------------------------------------------------------------A..................................................................................................................................................................................................2311.001010000
droBip1
CGG------------------------------------TGGCGG------AGGAGGAGCCGGTGGCAACTTCCACC---ACATGGCGCACAGAGGTAGATCAAACAGAAACACACGATCTCAAAAACCGCATCCCTATA---ACCATGCACAGAAATTTATTTAAA--CGC--------------------------------------------------------------------------------------AATTAATCTCTTTACAC-GA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCGAT----TTGCAGCCGATTCCGAA-TCTGATTCCCAGCCAGCCAGCCG---------------CA------AGCGAGCAATGGCAACTGCC------A---GAGCCACAGTC----ACATSizeHit CountTotal NormTotal
No Reads
dp5
TGT------------------------------------CGGTGT------CGGTGGTGGCGGTGGCGGCTACCAGC---ATATGGCGCATAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACTGCATCCATATAACAATCATGCACAGAAATTTATTTAAA-ACAC-----------------------------ACAAA--------------------------------------------------AAAATTAATTTCTTTACACCAA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGGTCATGCTGCCATTGCCACA----TTGCAGCCACTCCA----------------GCAGGCAGCCG---------------T------------GCAATGGCAGCAGCAAATTCCG---CATCC--------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................GCAGCCACTCCA----------------GCAGGCAGCCG---------------.........................................................2312.0020200000000
...........................................................................................AGAGGTAGATCAAATAGAACA.....................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
......................................................................................................................................................................................................................................................................................................................................................GCAGCCACTCCA----------------GCAGGCAGCCG---------------T------------GCAAC.......................................2911.0010001000000
...............................................................................................GTAGATCAAATAGAACAACACGA...............................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................CTCACAG---GTGAA---GTGGTCATG...................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................GCCG---------------T------------GCAATGGCAGCAGCAAA...........................2211.0010000010000
.................................................................................TATGGCGCATAGAGGTAGATCA..............................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.....................................................................................................CAAATAGAACAACACGATCT............................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................AGC---ATATGGCGCATAGAGGTA...................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
droPer2
TGT------------------------------------CGGTGT------CGGTGGTGGCGGTGGCGGCTACCAGC---ATATGGCGCATAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACTGCATCCATATAACAATCATGCACAGAAATTTATTTAAA-ACAC-----------------------------ACAAA--------------------------------------------------AAAATTAATTTCTTTACACCAA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGGTCATGCTGCCATTGCCACA----TTGCAGCCACTCCA----------------GCAGGCAGCCG---------------T------------GCAATGGCAGCAGCAAATTCCG---CATCC--------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.GT------------------------------------CGGTGT------CGGTGGTGGCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................GCATAGAGGTAGATCAAATAGAACA.....................................................................................................................................................................................................................................................................................................................................................2511.001000001
droWil2
-GG------------------------------------TGGCGG------T------------GGAGGCTACCATC---ATATGGCACACAGAGGTAGATCAAATAGACAAACACGATCTCAAAAACCGCATCCATATA---ACAATGCACAGAAATTTATTTAAA-ACGC--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCAAT----TTGCAACCACTCCA----GCTGCTCC-T--ACAGCCAGGAG---------------CA--------------A-------TGCA------A---CCACCACC-------ACAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................TGCAACCACTCCA----GCTGCTCC-T--ACAGCC.............................................................................2811.00101000
.......................................................................................ACACAGAGGTAGATCAAATAGACA......................................................................................................................................................................................................................................................................................................................................................2411.00100100
................................................................................................................................................................................................................................................................................................GCA---TCTCACAG---GTGAA---GTGTTCATG...................................................................................................................................2511.00100010
.....................................................................................................................................................................................................................................................................................................................................................TGCAACCACTCCA----GCTGCTCC-T--ACAGCCA............................................................................2911.00101000
.........................................................................CATC---ATATGGCACACAGAGGTAGATC...............................................................................................................................................................................................................................................................................................................................................................2611.00100010
..............................................................................................................................................................................................................................................................................TACAC-AA--TATTAGCTGCA---TCTCACAG---G...................................................................................................................................................2711.00101000
...............................................................................................GTAGATCAAATAGACAAACACGAT..............................................................................................................................................................................................................................................................................................................................................2411.00100010
..........................................................................................................................................................................................................................................................................................TTAGCTGCA---TCTCACAG---GTG.................................................................................................................................................2011.00100010
..........................................................................................................AGACAAACACGATCTCAAAAACCGCA.................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................................................................ATC---ATATGGCACACAGAGGTAGATC...............................................................................................................................................................................................................................................................................................................................................................2511.00100001
droVir3
CGG------------------------------------CGGTGG------CGGGGGCGGCGGCGTCGGCTATCACC---ATATGGCACATAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA-ACAA--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCTATCAGAATATTGCCAATGCC----------------CCGACCACAAG---------------CACTGCAGCG---GCAGCAGCAGCAGCC------G---CAGC---------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................GTCGGCTATCACC---ATATGGCA.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GCCAATGCC----------------CCGACCACAAG---------------C........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ACCACAAG---------------CACTGCAGCG---GC..........................................2011.001000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................C----------------CCGACCACAAG---------------CACTGCAGCG---GCA.........................................2511.001000000000000000000000000001000000000000000000000000000000000000
................................................................................ATATGGCACATAGAGGTAGA.................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................GTGTTCATGCTGCCATT...........................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................................................................................................................................................................................................................................AATGCC----------------CCGACCACAAG---------------CACTGCAGCG---............................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ATTGCCAATGCC----------------CCGAC..............................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................ACC---ATATGGCACATAGAGGT....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGAA---GTGTTCATGCTGCCAT............................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
................................................................GTCGGCTATCACC---ATATGGCAC............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................ATAGAGGTAGATCAAATAGAACAACAC.................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAG---GTGAA---GTGTTCATGC..................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CGACCACAAG---------------CACTGCAGCG---GCAGC.......................................2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CAAG---------------CACTGCAGCG---GCAGCAGCAGCA................................2611.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................AATAGAACAACACGATCTCAAA........................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................AGAGGTAGATCAAATAGAAC......................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
............................................................................C---ATATGGCACATAGAGGTAG..................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................CTCACAG---GTGAA---GTGTTCAT....................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTCTTTACAC-AA--TATTAGCTGC...................................................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTCACAG---GTGAA---GTGTTCATGCTGCCAT............................................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
droMoj3
CGG------------------------------------CGGCGT------C------------GGCGGCTATCACCACAATATGGCACACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATA---ACCATGCACAGAAATTTATTTAAA-TCAA--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCACACAG---GTGAA---GTGTTCATGCTGCCATTGCCAATCACTATAATGCCAATGCC----------------CCGACCACAAG---------------CAGA---------GCGGCTGCAGCTGCA------G---CAGCGACA-------GCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................GTAGATCAAATAGAACAACACGATC.............................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................ATTTCTTTACAC-AA--TATTAG.......................................................................................................................................................................2011.001100000
.......................................................................................................AATAGAACAACACGATCT............................................................................................................................................................................................................................................................................................................................................1820.501100000
droGri2
----------------------------------------------------------------GGTGGCTATCACCCCAATATGGCCAACAGAGGTAGATCAAATAGAACAACACGATCTCAAAAACCGCATCCATATACTAACAATGTACAGAAATTTATTTAAA-ACAA--------------------------------------------------------------------------------------AATTAATTTCTTTACAC-AA--TATTAGCTGCA---TCTCACAG---GTGAA---GTGTTCATGCTGCCATTGCCTATCACAGTAATGCCAATGCC----------------CCGTCCACAAG---------------CAGA---------GCTGCAGCAGCTGCAACTGTTGCAGCAGCGGCAGT-GCCTACTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................ATGCCAATGCC----------------CCGTCCACAAG---------------CAG......................................................2511.00110
........................................................................................................................................................................................................................................................................................................................................................................................ACAAG---------------CAGA---------GCTGCAGCAGCTGCAACTG.........................2811.00110

Generated: 05/17/2015 at 10:09 PM