ID:

der_3

 Coordinate:

scaffold_4820:10463240-10463300 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.0

Flybase annnotation

utr3 [utr3_minus_8371]

No Repeatable elements found

Sense Strand Reads

GCCGCCGCCGCCGATGAACGAAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACCAGCCACACCAGCCACAGCAGCCCAGT

***********************************.(((((((((((..(((((((((.((((((.(((((((.((.......))))))))).)))))).)))))))))..))))))))..))).************************************ 		Read size # Mismatch Hit Count Total Norm Total V108

head

 M055

female body

 V060

head

 V107

male body		 M057

embryo

 V040

embryo
........................................................................................TGTTAACTGTAAGACTGTGTCT................................................... 22 0 1 129674.00 129674 85997 14944 14806 8970 2212 2745
........................................................................................TGTTAACTGTGAGACTGTGTCT................................................... 22 1 1 9366.00 9366 8088 189 729 347 0 13
.........................................................................................GTTAACTGTAAGACTGTGTCT................................................... 21 0 1 2451.00 2451 646 1500 65 224 7 9
.......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................... 23 0 1 2271.00 2271 1777 47 125 284 17 21
........................................................................................TGTTAACTGTAAGACTGTGTC.................................................... 21 0 1 1814.00 1814 1293 89 213 143 58 18
........................................................................................TGTTAACTGTAAGACTGTGTCTT.................................................. 23 1 1 1169.00 1169 880 83 79 110 3 14
........................................................................................TTTTAACTGTAAGACTGTGTCT................................................... 22 1 1 988.00 988 254 91 7 77 550 9
........................................................................................TGTTAACTGTAAGACTGTGT..................................................... 20 0 1 940.00 940 793 11 77 56 0 3
........................................................................................TGTTAACTGTAATACTGTGTCT................................................... 22 1 1 845.00 845 682 32 82 6 0 43
........................................................................................TGTTAACTGTAAGACTGTGTCC................................................... 22 1 1 824.00 824 126 63 25 54 552 4
........................................................................................TGTTAACTGTAGGACTGTGTCT................................................... 22 1 1 782.00 782 634 9 90 44 1 4
........................................................................................TGTTAACTGTAAGACTGTGTCTA.................................................. 23 1 1 504.00 504 343 61 28 61 1 10
........................................................................................TGTTAACTGTGGGACTGTGTCT................................................... 22 2 1 460.00 460 387 12 45 16 0 0
........................................................................................TGTTAACTGTAAGACTGTGTAT................................................... 22 1 1 456.00 456 432 1 16 4 0 3
........................................................................................TGTTAACTGTAAGACTTTGTCT................................................... 22 1 1 439.00 439 310 46 54 4 2 23
........................................................................................TGTTAACTGTAAGACTGTTTCT................................................... 22 1 1 419.00 419 221 84 75 6 2 31
........................................................................................TGTTAAATGTAAGACTGTGTCT................................................... 22 1 1 345.00 345 266 60 15 1 0 3
........................................................................................TGCTAACTGTAAGACTGTGTCT................................................... 22 1 1 337.00 337 164 9 15 7 135 7
........................................................................................TGTTAACTGTAAGAATGTGTCT................................................... 22 1 1 301.00 301 272 0 10 1 14 4
........................................................................................TGTTAACTTTAAGACTGTGTCT................................................... 22 1 1 282.00 282 212 7 38 6 1 18
........................................................................................TGTTAACTGTAAGACTGTCT..................................................... 20 1 1 273.00 273 204 37 9 19 2 2
........................................................................................TGGTAACTGTAAGACTGTGTCT................................................... 22 1 1 266.00 266 97 38 99 17 0 15
..........................................................................................TTAACTGTAAGACTGTGTCT................................................... 20 0 1 230.00 230 109 98 1 21 1 0
........................................................................................TGTTAACTGTAAGACTGCGTCT................................................... 22 1 1 226.00 226 160 25 19 10 1 11
........................................................................................TGTTAACTGTAAGACTGTGCCT................................................... 22 1 1 206.00 206 130 18 26 21 10 1
........................................................................................TGTTGACTGTAAGACTGTGTCT................................................... 22 1 1 187.00 187 119 8 45 8 2 5
.........................................................................................TTTAACTGTAAGACTGTGTCT................................................... 21 1 1 178.00 178 128 25 1 24 0 0
........................................................................................CGTTAACTGTAAGACTGTGTCT................................................... 22 1 1 165.00 165 117 21 15 6 2 4
........................................................................................TGTTAACTGTAAGGCTGTGTCT................................................... 22 1 1 153.00 153 105 14 24 5 0 5
........................................................................................TGATAACTGTAAGACTGTGTCT................................................... 22 1 1 141.00 141 129 0 9 0 1 2
........................................................................................TGTTAACTGCAAGACTGTGTCT................................................... 22 1 1 137.00 137 103 6 16 6 1 5
........................................................................................TTTTAACTGTAAGACTGTGTCC................................................... 22 2 1 135.00 135 0 1 0 0 134 0
........................................................................................TGTTAACTGTAAGACTGTGTCA................................................... 22 1 1 135.00 135 64 30 12 27 1 1
........................................................................................TGTTAACTGTCAGACTGTGTCT................................................... 22 1 1 128.00 128 42 27 23 14 15 7
........................................................................................TGTTAACTGTAAGACTGTCTCT................................................... 22 1 1 125.00 125 93 10 8 9 0 5
........................................................................................TGTTAACTGTAAGACCGTGTCT................................................... 22 1 1 124.00 124 92 13 11 2 2 4
........................................................................................TCTTAACTGTAAGACTGTGTCT................................................... 22 1 1 113.00 113 85 7 6 6 7 2
........................................................................................TGTTAACCGTAAGACTGTGTCT................................................... 22 1 1 108.00 108 84 9 7 5 1 2
........................................................................................TGTTAACTGTAAGACTGGGTCT................................................... 22 1 1 108.00 108 69 12 12 4 5 6
........................................................................................TGTTAACTGTAAGACTGTGTGT................................................... 22 1 1 108.00 108 18 79 7 3 1 0
........................................................................................TGTTAGCTGTAAGACTGTGTCT................................................... 22 1 1 107.00 107 81 2 10 7 4 3
........................................................................................TGTCAACTGTAAGACTGTGTCT................................................... 22 1 1 107.00 107 65 7 19 3 9 4
........................................................................................TGTTAACTATAAGACTGTGTCT................................................... 22 1 1 102.00 102 66 17 12 2 2 3
........................................................................................TGTTAACTGTAAGCCTGTGTCT................................................... 22 1 1 101.00 101 45 0 48 2 0 6
..................................................ACATAGTCATACGGTGAATGTT......................................................................................... 22 0 1 95.00 95 44 13 23 13 2 0
.......................................................................................CTGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 95.00 95 74 5 15 0 1 0
........................................................................................TGTTAACTGTAACACTGTGTCT................................................... 22 1 1 95.00 95 59 19 8 6 0 3
........................................................................................TGTTAACTGTAAGACTGTATCT................................................... 22 1 1 90.00 90 62 6 16 3 0 3
........................................................................................TGTTAACTGTAAGACTGTGTCTC.................................................. 23 0 1 90.00 90 55 9 17 3 6 0
........................................................................................TGTTAACTGTAAGATTGTGTCT................................................... 22 1 1 87.00 87 56 15 13 1 0 2
........................................................................................TGTTAACTGTTAGACTGTGTCT................................................... 22 1 1 87.00 87 82 0 3 0 0 2
........................................................................................TGTTAACTGTAAGACTATGTCT................................................... 22 1 1 84.00 84 56 5 12 3 1 7
........................................................................................TGTTAACTGTAAGACTGTGGCT................................................... 22 1 1 79.00 79 11 52 7 1 1 7
........................................................................................TGTTAACTGTACGACTGTGTCT................................................... 22 1 1 76.00 76 38 3 26 4 1 4
........................................................................................TGTTAACTGTATGACTGTGTCT................................................... 22 1 1 76.00 76 46 23 6 1 0 0
........................................................................................TGTTCACTGTAAGACTGTGTCT................................................... 22 1 1 75.00 75 48 4 11 9 0 3
........................................................................................TGTGAACTGTAAGACTGTGTCT................................................... 22 1 1 72.00 72 51 3 5 0 11 2
........................................................................................TGTTAACTGTAAGACTGTGTTT................................................... 22 1 1 70.00 70 36 8 17 1 0 8
........................................................................................TATTAACTGTAAGACTGTGTCT................................................... 22 1 1 68.00 68 42 6 6 2 12 0
........................................................................................TGTTGACTGTGAGACTGTGTCT................................................... 22 2 1 67.00 67 61 1 3 2 0 0
............................................................................................AACTGTAAGACTGTGTCT................................................... 18 0 1 66.00 66 56 4 3 0 0 3
........................................................................................TGTTAACTGTAAAACTGTGTCT................................................... 22 1 1 64.00 64 36 14 6 2 2 4
........................................................................................TGTTAACTGTAAGACTCTGTCT................................................... 22 1 1 64.00 64 44 1 10 2 0 7
........................................................................................AGTTAACTGTAAGACTGTGTCT................................................... 22 1 1 63.00 63 31 22 1 5 1 3
........................................................................................GGTTAACTGTAAGACTGTGTCT................................................... 22 1 1 61.00 61 27 15 1 15 3 0
........................................................................................TGTTAACTGTGATACTGTGTCT................................................... 22 2 1 59.00 59 57 0 1 1 0 0
........................................................................................TGTAAACTGTAAGACTGTGTCT................................................... 22 1 1 56.00 56 32 7 2 1 9 5
..................................................ACATAGTCATACGGTGAATGTTG........................................................................................ 23 0 1 55.00 55 36 5 6 8 0 0
.......................................................................................ATGTTAACTGTGAGACTGTGTCT................................................... 23 1 1 54.00 54 44 0 3 7 0 0
.......................................................................................ATGTTAACTGTAAGACTGTGT..................................................... 21 0 1 53.00 53 37 1 1 13 0 1
.........................................................................................GTTAACTGTGAGACTGTGTCT................................................... 21 1 1 52.00 52 27 22 3 0 0 0
........................................................................................TGTTAATTGTAAGACTGTGTCT................................................... 22 1 1 52.00 52 33 1 11 5 0 2
...........................................................................................TAACTGTAAGACTGTGTCT................................................... 19 0 1 51.00 51 32 15 0 2 1 1
.......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................... 22 0 1 51.00 51 35 0 8 7 1 0
........................................................................................TGTTAACTGGAAGACTGTGTCT................................................... 22 1 1 50.00 50 12 11 17 6 0 4
........................................................................................TGTTAACTGTAAGACTGAGTCT................................................... 22 1 1 50.00 50 27 11 8 0 1 3
........................................................................................TGTTAACTCTAAGACTGTGTCT................................................... 22 1 1 48.00 48 25 1 6 6 1 9
........................................................................................TGTTAACTGTAAGTCTGTGTCT................................................... 22 1 1 44.00 44 13 11 15 1 0 4
........................................................................................TGTTAACTGTAAGACTGTGTCTTT................................................. 24 2 1 43.00 43 27 3 2 11 0 0
........................................................................................TGTTAACTGTAAGACTGTGTCTG.................................................. 23 1 1 42.00 42 36 1 4 1 0 0
........................................................................................TGCTAACTGTAAGACTGTGTCC................................................... 22 2 1 39.00 39 0 0 0 0 39 0
........................................................................................TGTTAACTGTGAGACTGTGTAT................................................... 22 2 1 39.00 39 39 0 0 0 0 0
........................................................................................TTCTAACTGTAAGACTGTGTCT................................................... 22 2 1 36.00 36 1 0 0 0 35 0
........................................................................................TGTTAACTGTGAGACTGTGTC.................................................... 21 1 1 35.00 35 31 0 3 0 1 0
........................................................................................TGTTATCTGTAAGACTGTGTCT................................................... 22 1 1 34.00 34 12 12 6 3 0 1
........................................................................................TGTTACCTGTAAGACTGTGTCT................................................... 22 1 1 33.00 33 27 0 4 0 0 2
........................................................................................TTTTAACTGTGAGACTGTGTCT................................................... 22 2 1 31.00 31 27 1 0 3 0 0
..................................................ACATAGTCATACGGTGAATGT.......................................................................................... 21 0 1 31.00 31 23 2 2 3 1 0
........................................................................................TGTTAACTTTGAGACTGTGTCT................................................... 22 2 1 29.00 29 25 0 3 1 0 0
........................................................................................TGTTTACTGTAAGACTGTGTCT................................................... 22 1 1 28.00 28 13 0 6 3 4 2
........................................................................................TGTTAACTGTAAGACTGTGTCTAA................................................. 24 2 1 28.00 28 10 11 0 3 0 4
........................................................................................TGTTAACTGTAATACTTTGTCT................................................... 22 2 1 27.00 27 8 1 9 0 0 9
........................................................................................TTTTAACTGTAAGACTGTGTC.................................................... 21 1 1 27.00 27 3 1 0 2 21 0
........................................................................................TGTTAACTGTAAGACTGTG...................................................... 19 0 1 27.00 27 21 2 3 0 1 0
........................................................................................TGTTAACTGTAAGACTGTGACT................................................... 22 1 1 25.00 25 13 2 4 2 3 1
........................................................................................TGTTAACTGTGAGACTTTGTCT................................................... 22 2 1 25.00 25 24 0 1 0 0 0
.........................................................................................GTTAACTGTAAGACTGTGTCTT.................................................. 22 1 1 23.00 23 11 8 2 1 0 1
.......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................... 23 1 1 23.00 23 20 0 0 0 3 0
........................................................................................TGTTAACTGTGAGAATGTGTCT................................................... 22 2 1 23.00 23 20 0 3 0 0 0
........................................................................................TGTTAACTGAAAGACTGTGTCT................................................... 22 1 1 22.00 22 14 4 3 1 0 0
........................................................................................TGTTAACTGCGAGACTGTGTCT................................................... 22 2 1 22.00 22 19 0 3 0 0 0
........................................................................................TGGTAACTGGAAGACTGTGTCT................................................... 22 2 1 22.00 22 0 0 21 0 0 1
........................................................................................TGTTAACTGTGAGACTGTTTCT................................................... 22 2 1 21.00 21 19 0 2 0 0 0
........................................................................................TGTTAACTGTAATACTGTGTC.................................................... 21 1 1 20.00 20 16 1 0 1 0 2
........................................................................................TGTTAACTGTAAGACAGTGTCT................................................... 22 1 1 20.00 20 9 4 2 4 0 1
........................................................................................TGTTAACTGTAAGACTGTGTCG................................................... 22 1 1 20.00 20 10 3 5 0 0 2
.........................................................................................GTTAACTGTAAGACTGTGTC.................................................... 20 0 1 20.00 20 7 10 1 1 1 0
.........................................................................................TGTAACTGTAAGACTGTGTCT................................................... 21 2 1 20.00 20 16 0 0 3 1 0
........................................................................................TGTTAAGTGTAAGACTGTGTCT................................................... 22 1 1 19.00 19 10 2 1 1 0 5
........................................................................................TGTTAACTGTAGGACTGTGTC.................................................... 21 1 1 18.00 18 15 0 2 1 0 0
.......................................................................................ATGTTAACTGTAAGACTGTGTAT................................................... 23 1 1 18.00 18 18 0 0 0 0 0
.......................................................................................ATGTTAACTGTAATACTGTGTCT................................................... 23 1 1 18.00 18 16 0 0 0 0 2
........................................................................................TGTTAAATGTGAGACTGTGTCT................................................... 22 2 1 18.00 18 18 0 0 0 0 0
........................................................................................TGGTAACTGTGAGACTGTGTCT................................................... 22 2 1 17.00 17 9 1 7 0 0 0
.......................................................................................ATGTTAACTGTAGGACTGTGTCT................................................... 23 1 1 16.00 16 13 0 1 2 0 0
........................................................................................TGTTAACTGTGAGACTGCGTCT................................................... 22 2 1 16.00 16 15 0 1 0 0 0
........................................................................................TGTTAACTGTAAGAGTGTGTCT................................................... 22 1 1 16.00 16 12 3 1 0 0 0
........................................................................................TGTTAACTGTAGGACTGTGT..................................................... 20 1 1 15.00 15 13 0 1 1 0 0
........................................................................................TGCTAACTGTGAGACTGTGTCT................................................... 22 2 1 15.00 15 15 0 0 0 0 0
........................................................................................TGTTAACTGTTGGACTGTGTCT................................................... 22 2 1 14.00 14 13 0 1 0 0 0
........................................................................................TGTTAACTGTGAGACTGTGCCT................................................... 22 2 1 14.00 14 10 0 4 0 0 0
........................................................................................TGTTAACTGTGAGGCTGTGTCT................................................... 22 2 1 14.00 14 9 1 4 0 0 0
........................................................................................TGTTAGCTGTGAGACTGTGTCT................................................... 22 2 1 14.00 14 11 1 1 0 0 1
........................................................................................TGTTAACGGTAAGACTGTGTCT................................................... 22 1 1 14.00 14 4 0 5 2 1 2
.......................................................................................CTGTTAACTGTGAGACTGTGTCT................................................... 23 2 1 14.00 14 13 0 1 0 0 0
........................................................................................TGTTAACTGTAAGACTGTTCT.................................................... 21 3 2 13.50 27 23 3 0 1 0 0
.........................................................................................GTTCACTGTAAGACTGTGTCT................................................... 21 1 1 13.00 13 1 12 0 0 0 0
........................................................................................TGTTAACTGTAGTACTGTGTCT................................................... 22 2 1 12.00 12 11 0 1 0 0 0
........................................................................................TGTTAACTGTGTGACTGTGTCT................................................... 22 2 1 12.00 12 11 1 0 0 0 0
.........................................................................................TTTAACTGTGAGACTGTGTCT................................................... 21 2 1 12.00 12 11 0 0 1 0 0
........................................................................................TGTTAACTGTAATACTGTTTCT................................................... 22 2 1 12.00 12 3 1 7 0 0 1
...............................ATGCCGCTCAATTACCCCG............................................................................................................... 19 0 1 12.00 12 10 2 0 0 0 0
........................................................................................TGTTAACTGTAAGACGGTGTCT................................................... 22 1 1 12.00 12 6 4 1 0 1 0
.......................................................................................ATGTTAACTGTGGGACTGTGTCT................................................... 23 2 1 12.00 12 10 0 0 2 0 0
........................................................................................TGTTAACTGTGAGCCTGTGTCT................................................... 22 2 1 12.00 12 9 0 3 0 0 0
........................................................................................TGTTAACTTTAATACTGTGTCT................................................... 22 2 1 12.00 12 2 0 7 0 0 3
........................................................................................TGTTAACTGTGAGACTGTCT..................................................... 20 2 2 11.50 23 22 0 0 1 0 0
.........................................................................................GTTAACTGTAAGACTGTGTCTC.................................................. 22 0 1 11.00 11 4 4 1 2 0 0
.......................................................................................ATGTTAACTGTAAGACTTTGTCT................................................... 23 1 1 11.00 11 10 1 0 0 0 0
........................................................................................TCTTAACTGTGAGACTGTGTCT................................................... 22 2 1 11.00 11 11 0 0 0 0 0
........................................................................................CGTTAACTGTGAGACTGTGTCT................................................... 22 2 1 11.00 11 10 0 0 1 0 0
........................................................................................TGTTAACTGTAAGACTGTGTA.................................................... 21 1 1 11.00 11 10 0 1 0 0 0
.......................................................................................ATGTTAACTGTAAGACTGTGTCA................................................... 23 1 1 11.00 11 11 0 0 0 0 0
........................................................................................TGTTAACTGTGAGACTGTGT..................................................... 20 1 1 10.00 10 8 0 1 1 0 0
........................................................................................TGTTAACTGTGAGACTGTCTCT................................................... 22 2 1 10.00 10 10 0 0 0 0 0
........................................................................................TGTTGACTGTAGGACTGTGTCT................................................... 22 2 1 10.00 10 8 0 2 0 0 0
........................................................................................TGTTAACTTTAAGACTGTGTC.................................................... 21 1 1 10.00 10 9 0 1 0 0 0
........................................................................................TGTTAACTATGAGACTGTGTCT................................................... 22 2 1 10.00 10 9 0 1 0 0 0
........................................................................................TGTTAACTGTGAGACCGTGTCT................................................... 22 2 1 10.00 10 9 1 0 0 0 0
.......................................................................................GTGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 10.00 10 1 9 0 0 0 0
........................................................................................TGTTAACCGTGAGACTGTGTCT................................................... 22 2 1 10.00 10 9 1 0 0 0 0
..........................................................................................TTAACTGTGAGACTGTGTCT................................................... 20 1 1 9.00 9 7 2 0 0 0 0
........................................................................................TGTTAACTGTGAGATTGTGTCT................................................... 22 2 1 9.00 9 9 0 0 0 0 0
........................................................................................TTTTAACTGTCAGACTGTGTCT................................................... 22 2 1 9.00 9 0 0 0 0 9 0
........................................................................................TTTGAACTGTAAGACTGTGTCT................................................... 22 2 1 9.00 9 0 0 0 0 9 0
.........................................................................................GTTAACTGTAAGACTGTGTCC................................................... 21 1 1 9.00 9 0 4 0 1 4 0
.........................................................................................GGTAACTGTAAGACTGTGTCT................................................... 21 1 1 9.00 9 0 6 0 3 0 0
.......................................................................................ATGTTAACTGTAAGACTGTGTCG................................................... 23 1 1 9.00 9 9 0 0 0 0 0
........................................................................................TGGTAGCTGTAAGACTGTGTCT................................................... 22 2 1 9.00 9 0 0 9 0 0 0
........................................................................................TGTTAACTGTGGTACTGTGTCT................................................... 22 3 1 9.00 9 5 0 4 0 0 0
.......................................................................................ATGTTAACTGTAAGACTGTTTCT................................................... 23 1 1 9.00 9 7 1 1 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGTCTAAA................................................ 25 3 1 8.00 8 1 7 0 0 0 0
.......................................................................................ATGTTAACTGTAAGCCTGTGTCT................................................... 23 1 1 8.00 8 5 0 3 0 0 0
........................................................................................TGTTAACTGTGCGACTGTGTCT................................................... 22 2 1 8.00 8 7 0 1 0 0 0
........................................................................................TGTTAACTGGGAGACTGTGTCT................................................... 22 2 1 8.00 8 5 0 3 0 0 0
........................................................................................TTCTAACTGTAAGACTGTGTCC................................................... 22 3 1 8.00 8 0 0 0 0 8 0
........................................................................................TGTTAACTGTAAGACTCTCT..................................................... 20 2 1 8.00 8 7 0 0 1 0 0
........................................................................................TGTTAACTGTGAGACTGTATCT................................................... 22 2 1 8.00 8 8 0 0 0 0 0
........................................................................................TGTTAACTGTAAGACTGT....................................................... 18 0 1 8.00 8 5 2 1 0 0 0
.......................................................................................TTGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 7.00 7 1 6 0 0 0 0
........................................................................................TGATAACTGTGAGACTGTGTCT................................................... 22 2 1 7.00 7 7 0 0 0 0 0
........................................................................................TTTCAACTGTAAGACTGTGTCT................................................... 22 2 1 7.00 7 0 0 0 0 7 0
........................................................................................TGTTAACTGTAATACTGTGT..................................................... 20 1 1 7.00 7 7 0 0 0 0 0
........................................................................................TGTTAACAGTAAGACTGTGTCT................................................... 22 1 1 7.00 7 4 2 0 1 0 0
........................................................................................TGTTCACTGTGAGACTGTGTCT................................................... 22 2 1 7.00 7 7 0 0 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGCT.................................................... 21 2 1 7.00 7 6 1 0 0 0 0
........................................................................................ATTTAACTGTAAGACTGTGTCT................................................... 22 2 1 7.00 7 2 0 0 0 5 0
........................................................................................TGGTAACTGTAAGACTGGGTCT................................................... 22 2 1 7.00 7 0 0 7 0 0 0
.........................................................................................GTTAACTGTAAGACTGTGT..................................................... 19 0 1 7.00 7 2 3 0 2 0 0
........................................................................................TATTAACTGTGAGACTGTGTCT................................................... 22 2 1 7.00 7 6 0 0 1 0 0
.........................................................................................TCTAACTGTAAGACTGTGTCT................................................... 21 2 1 7.00 7 4 0 0 3 0 0
........................................................................................TGTTAACTGTAAGACTTTCT..................................................... 20 2 1 7.00 7 6 1 0 0 0 0
........................................................................................TGTTAACTGTAAGAATGTGTC.................................................... 21 1 1 6.00 6 5 0 1 0 0 0
.........................................................................................GTTAACTGTAAGACTGTCT..................................................... 19 1 1 6.00 6 2 3 0 1 0 0
.........................................................................................GTTAACTGTAAGACTGTGTCTA.................................................. 22 1 1 6.00 6 4 2 0 0 0 0
........................................................................................TGCTAACTGTAAGACTGTGTC.................................................... 21 1 1 6.00 6 4 0 0 0 2 0
........................................................................................TGGTAACTGTAGGACTGTGTCT................................................... 22 2 1 6.00 6 0 0 5 1 0 0
........................................................................................TGTCAACTGTGAGACTGTGTCT................................................... 22 2 1 6.00 6 6 0 0 0 0 0
........................................................................................TGTTAACTGTAGGACTGTGTAT................................................... 22 2 1 6.00 6 4 0 2 0 0 0
........................................................................................TGTTAACTGTGGGACTGTGT..................................................... 20 2 1 6.00 6 6 0 0 0 0 0
......................................................................................AATGTTAACTGTAAGACTGTGTCT................................................... 24 0 1 6.00 6 1 1 2 2 0 0
........................................................................................TGTTAACTGAGAGACTGTGTCT................................................... 22 2 1 6.00 6 4 1 0 1 0 0
........................................................................................TGTTAACTGTGAGACTGTGTCC................................................... 22 2 1 6.00 6 4 0 2 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGTCTCT................................................. 24 1 1 6.00 6 5 0 0 1 0 0
........................................................................................TGTTAAATGTAAGACTGTGGCT................................................... 22 2 1 5.00 5 0 1 2 0 0 2
........................................................................................TGTTAACTGTAGGACCGTGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0
........................................................................................TTTTAACTGTAAGAATGTGTCT................................................... 22 2 1 5.00 5 1 0 0 1 3 0
.........................................................................................GCTAACTGTAAGACTGTGTCT................................................... 21 1 1 5.00 5 2 1 0 2 0 0
.......................................................................................ATGTTAACTGTAAGACTGCGTCT................................................... 23 1 1 5.00 5 4 0 0 1 0 0
........................................................................................TGTTAACTGTAAGACTGTGTTCT.................................................. 23 3 1 5.00 5 3 0 0 2 0 0
.......................................................................................ATGTTAACTGTAAGAATGTGTCT................................................... 23 1 1 5.00 5 4 0 1 0 0 0
........................................................................................TGGTAAGTGTAAGACTGTGTCT................................................... 22 2 1 5.00 5 0 0 4 0 0 1
.........................................................................................GTTAACTGTAATACTGTGTCT................................................... 21 1 1 5.00 5 4 1 0 0 0 0
........................................................................................TGGTAACTGTAATACTGTGTCT................................................... 22 2 1 5.00 5 1 1 3 0 0 0
........................................................................................TGTTAACTCTGAGACTGTGTCT................................................... 22 2 1 5.00 5 4 0 1 0 0 0
........................................................................................TGTTAACTGTGAGACTGGGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0
........................................................................................TGTTAACTGTAAGACTTTGCCT................................................... 22 2 1 5.00 5 2 0 3 0 0 0
........................................................................................TGTTAACTGTAAGAATGTGT..................................................... 20 1 1 5.00 5 3 0 2 0 0 0
.........................................................................................GTTAACTGTAAGACTGGGTCT................................................... 21 1 1 5.00 5 0 5 0 0 0 0
........................................................................................TGTTAACTGTAAGACTTTGTC.................................................... 21 1 1 5.00 5 4 1 0 0 0 0
........................................................................................TGTGAACTGTGAGACTGTGTCT................................................... 22 2 1 5.00 5 4 0 1 0 0 0
........................................................................................TGTTAACTGTAAGACTGTTTC.................................................... 21 1 1 5.00 5 2 1 1 0 1 0
........................................................................................TGTTAACTGTGGGACTGTGTC.................................................... 21 2 1 5.00 5 5 0 0 0 0 0
........................................................................................CTTTAACTGTAAGACTGTGTCT................................................... 22 2 1 5.00 5 2 1 0 0 1 1
.......................................................................................ATGTTAACTGTAAGACTGTCT..................................................... 21 1 1 5.00 5 4 0 0 1 0 0
.........................................................................................GTTAACTGTAAGACTGTGTCG................................................... 21 1 1 5.00 5 0 5 0 0 0 0
.......................................................................................ATGTTAACTGTAAGACTGTGCCT................................................... 23 1 1 5.00 5 4 0 0 0 0 1
.......................................................................................ATTTTAACTGTAAGACTGTGTCT................................................... 23 1 1 5.00 5 2 0 0 3 0 0
........................................................................................TGTTAAATGTAAGAATGTGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0
........................................................................................TGTTAACTGTGAGACTGTGTCTT.................................................. 23 2 1 5.00 5 4 0 0 1 0 0
........................................................................................TGTTAACTGTAAGACTGTGCC.................................................... 21 1 1 5.00 5 3 0 2 0 0 0
........................................................................................TGTTAACTGTAGGACTGTGTCC................................................... 22 2 1 5.00 5 4 0 0 0 1 0
............................................................................................AACTGTGAGACTGTGTCT................................................... 18 1 1 5.00 5 5 0 0 0 0 0
.........................................................................................GTTAACTGTAAGACTGTTTCT................................................... 21 1 1 5.00 5 0 5 0 0 0 0
........................................................................................TGTTAACTGTAAGAATGTGTCC................................................... 22 2 1 5.00 5 1 0 0 0 4 0
........................................................................................TTTTAACTGTAAGACTTTGTCT................................................... 22 2 1 5.00 5 3 0 0 0 2 0
........................................................................................TGTTAAATGTAAGACTGTGTAT................................................... 22 2 1 5.00 5 4 0 1 0 0 0
........................................................................................TGTTAACTTTAAGACTGTGT..................................................... 20 1 1 4.00 4 3 0 0 1 0 0
........................................................................................TGCTAACTGTAAGACTGTTTCT................................................... 22 2 1 4.00 4 1 0 1 0 1 1
........................................................................................GGTTAACTGTGAGACTGTGTCT................................................... 22 2 1 4.00 4 3 0 0 1 0 0
........................................................................................TGCTAACTCTAAGACTGTGTCT................................................... 22 2 1 4.00 4 0 0 0 0 1 3
........................................................................................TGTTAACTGTAAGACTGCGTC.................................................... 21 1 1 4.00 4 3 0 1 0 0 0
........................................................................................TGTTAACTTTAAGACTGTTTCT................................................... 22 2 1 4.00 4 3 0 1 0 0 0
........................................................................................GTTTAACTGTAAGACTGTGTCT................................................... 22 2 1 4.00 4 1 0 0 0 3 0
.........................................................................................GTTAGCTGTAAGACTGTGTCT................................................... 21 1 1 4.00 4 1 2 0 1 0 0
.........................................................................................GTTAACTGTAGGACTGTGTCT................................................... 21 1 1 4.00 4 1 1 0 2 0 0
........................................................................................TTTAAACTGTAAGACTGTGTCT................................................... 22 2 1 4.00 4 0 0 0 0 4 0
.........................................................................................GTTAACTGTAAGACTTTGTCT................................................... 21 1 1 4.00 4 1 2 1 0 0 0
.........................................................................................GTTAACTGTAAGACTGTGCCT................................................... 21 1 1 4.00 4 1 1 0 2 0 0
.........................................................................................GTTAACTGTAAGACTGTGTCTAAA................................................ 24 3 1 4.00 4 0 4 0 0 0 0
........................................................................................TGTTCACTGTAAGCCTGTGTCT................................................... 22 2 1 4.00 4 0 0 4 0 0 0
.......................................................................................ATGTTAAATGTAAGACTGTGTCT................................................... 23 1 1 4.00 4 4 0 0 0 0 0
........................................................................................TTTTAACTGTAAGACTGTTTCT................................................... 22 2 1 4.00 4 1 2 0 0 1 0
........................................................................................TGTTAACTTTAAGACTCTGTCT................................................... 22 2 1 4.00 4 0 0 3 0 0 1
........................................................................................TGTTAACTGTGACACTGTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
.........................................................................................TGTTACTGTAAGACTGTGTCT................................................... 21 3 2 4.00 8 6 1 1 0 0 0
........................................................................................TGGTAACTGTAAGCCTGTGTCT................................................... 22 2 1 4.00 4 0 0 4 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGTCTAT................................................. 24 2 1 4.00 4 3 0 0 1 0 0
........................................................................................TGTTAACTGTAAGACTGCTTCT................................................... 22 2 1 4.00 4 1 1 0 0 0 2
........................................................................................TGTTAACTGTGAGACTATGTCT................................................... 22 2 1 4.00 4 3 0 1 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGCAT................................................... 22 2 1 4.00 4 3 0 1 0 0 0
........................................................................................TGTAAACTGTGAGACTGTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
........................................................................................TGTTAACTGTGAGACTCTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
........................................................................................TTTTAACTTTAAGACTGTGTCT................................................... 22 2 1 4.00 4 3 0 0 0 0 1
........................................................................................TGTTAACTGTAAGACTGTTTCTT.................................................. 23 2 1 4.00 4 4 0 0 0 0 0
........................................................................................TGTAAACTGTAAGACTGTGTCC................................................... 22 2 1 4.00 4 0 0 0 0 4 0
........................................................................................TGTTAACTGTAAGACTCT....................................................... 18 1 1 4.00 4 4 0 0 0 0 0
........................................................................................TGTTAACTGTAAGACTGTCC..................................................... 20 2 1 4.00 4 1 0 0 0 3 0
........................................................................................TGTTAACTGTAGGAATGTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
.........................................................................................GTTAACTGTACGACTGTGTCT................................................... 21 1 1 4.00 4 0 4 0 0 0 0
.........................................................................................GTTAACTGTAAGACTGTCTCT................................................... 21 1 1 4.00 4 0 3 0 1 0 0
........................................................................................TTTTAACTGTAAGACTGGGTCT................................................... 22 2 1 4.00 4 1 0 0 0 3 0
........................................................................................TGTTAACTGTGAGACTGTGTTT................................................... 22 2 1 4.00 4 3 0 1 0 0 0
........................................................................................TGGTAACTGTAAGGCTGTGTCT................................................... 22 2 1 4.00 4 0 0 3 0 0 1
........................................................................................TGTTAACTGTAATACTGCGTCT................................................... 22 2 1 4.00 4 2 0 1 0 0 1
........................................................................................TGTTAACTGTGAGACTGTGTCTA.................................................. 23 2 1 4.00 4 4 0 0 0 0 0
........................................................................................TGTTAAATGTAGGACTGTGTCT................................................... 22 2 1 4.00 4 3 0 1 0 0 0
........................................................................................TGGTAACTGTAAGACTGTTTCT................................................... 22 2 1 4.00 4 1 2 0 0 0 1
.......................................................................................AGGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 4.00 4 2 0 0 0 2 0
.......................................................................................CTGTTAACTGTAAGACTGTGT..................................................... 21 1 1 4.00 4 4 0 0 0 0 0
........................................................................................TGCTAACTGTAACACTGTGTCT................................................... 22 2 1 3.00 3 0 0 1 0 2 0
........................................................................................TGTTAACTGTAAGACTGTC...................................................... 19 1 1 3.00 3 2 0 1 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGCCTT.................................................. 23 2 1 3.00 3 3 0 0 0 0 0
.........................................................................................GTTAACTGTAAGACTGTATCT................................................... 21 1 1 3.00 3 0 3 0 0 0 0
........................................................................................TGTTAACTGTAAGACTGTGTCAA.................................................. 23 2 1 3.00 3 0 3 0 0 0 0
.......................................................................................ATGCTAACTGTAAGACTGTGTCT................................................... 23 1 1 3.00 3 3 0 0 0 0 0
........................................................................................TGTTAACTGTAATACTGTGTCTT.................................................. 23 2 1 3.00 3 3 0 0 0 0 0
........................................................................................TGTGAACTGTAAGACTGTGTCC................................................... 22 2 1 3.00 3 0 0 0 0 3 0
........................................................................................TGTTAACTGTAGGGCTGTGTCT................................................... 22 2 1 3.00 3 3 0 0 0 0 0
.......................................................................................ATGTTAACTATAAGACTGTGTCT................................................... 23 1 1 3.00 3 2 0 1 0 0 0
.......................................................................................ATGTTAACTTTAAGACTGTGTCT................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................ATGTTAACTGTAAGACCGTGTCT................................................... 23 1 1 3.00 3 2 0 0 1 0 0
........................................................................................TGTCAACTGTAAGACTGTGTCC................................................... 22 2 1 3.00 3 0 0 0 0 3 0
........................................................................................TGTTAACTGTAATACTGGGTCT................................................... 22 2 1 3.00 3 2 0 1 0 0 0
........................................................................................TGTTAACTGTAAGATTGCGTCT................................................... 22 2 1 3.00 3 0 2 1 0 0 0
........................................................................................TGTTAACTGCAAGAATGTGTCT................................................... 22 2 1 3.00 3 2 0 1 0 0 0
........................................................................................TGTCAACTGTAAGACTGTGT..................................................... 20 1 1 3.00 3 3 0 0 0 0 0
........................................................................................TGTTAACTGCAATACTGTGTCT................................................... 22 2 1 3.00 3 2 0 1 0 0 0
........................................................................................CGTTAACTGTAAGACTGTGTCC................................................... 22 2 1 3.00 3 0 0 0 0 3 0
...........................................................................................TAACTGTGAGACTGTGTCT................................................... 19 1 1 3.00 3 3 0 0 0 0 0
.........................................................................................TTTAACTGTAAGACTGTGTCC................................................... 21 2 1 3.00 3 1 0 0 1 1 0
........................................................................................TGTTAGCTGTAAGACTGTGT..................................................... 20 1 1 3.00 3 3 0 0 0 0 0
........................................................................................TGGTAACGGTGAGACTGTGTCT................................................... 22 3 1 3.00 3 0 0 3 0 0 0
........................................................................................TGTTAACTGTAATACTCTGTCT................................................... 22 2 1 3.00 3 1 0 1 0 0 1
........................................................................................TGTTCACTGTAAGACTGTGTC.................................................... 21 1 1 3.00 3 3 0 0 0 0 0
........................................................................................TTTGAACTGTAAGACTGTGTCC................................................... 22 3 2 3.00 6 0 0 0 0 6 0
..........................................................................................TTAACTGTAAGACTGTGTCTCT................................................. 22 1 1 3.00 3 2 0 0 1 0 0
........................................................................................TGTTAACTGTAAGACTGTTT..................................................... 20 1 1 3.00 3 2 1 0 0 0 0
........................................................................................TGTTAACTGTGAGACTGTGTCA................................................... 22 2 1 3.00 3 2 0 1 0 0 0
........................................................................................TGGTAACTGTAAGACTGTGTTT................................................... 22 2 1 3.00 3 0 0 3 0 0 0
........................................................................................TGATAAATGTAAGACTGTGTCT................................................... 22 2 1 3.00 3 1 0 2 0 0 0

Anti-sense strand reads

CGGCGGCGGCGGCTACTTGCTTCTTCTTTCCTACGGCGAGTTAATGGGGCTGTATCAGTATGCCACTTACAACACATAACCTCTGGTTACAATTGACATTCTGACACAGAGCCACCAACGGTCGGGTCGGTGTGGTCGGTGTGGTCGGTGTCGTCGGGTCA

************************************.(((((((((((..(((((((((.((((((.(((((((.((.......))))))))).)))))).)))))))))..))))))))..))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total V040

embryo

 V108

head

 M055

female body
....................................................TCTCAGTATGCCAAGTACAA......................................................................................... 20 3 4 0.25 1 1 0 0
.....................................................................................................................ACGGTCAAGTCGGTGTGGGCG....................... 21 3 4 0.25 1 0 1 0
...................................................GAATCAGAATGCCACCTA............................................................................................ 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4820:10463190-10463350 + der_3 confident GCCGCCGCCG---------------CC---------GAT------------GAACGA---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C---------------------CAGCCACACC----------------------------AGCCACAGCAGCCC----AGT-------------
droYak3 3R:18443906-18444057 - dya_4 confident A---------------------------------------------------AATCG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACAC--CA---G---------------CCACATCAGCCACATCGGCCAC-----AAA---------------------CCAGCTC----AGT-------------
droSec2 scaffold_0:17996307-17996454 - dse_7 confident GCCGCCGCCA---------CTGTAGTC---------GAT------------GAACGG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C--------------------------------------------------------------------AGCCC----AGT-------------
droSim2 3r:17135821-17135962 - dsi-mir-999 Known_mirbase GCCACTGTAG---------------CC---------GAT------------GAACGG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C--------------------------------------------------------------------AGCCC----AGT-------------
dm3 chr3R:17623939-17624083 - dme-mir-999 Known_mirbase GCCGACGCTG---------T---AGCC---------GAT------------GAACGG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C--------------------------------------------------------------------AGCCC----AGT-------------
droEug1 scf7180000409490:921824-921960 - GTCGCCGC------------------C---------CAT------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCTGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACAATA-ACAA-------------------------------------------------------------------------TGT-------------
droBia1 scf7180000302402:6491254-6491383 + GAC------------------------------------------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACA---G--AA------------------------------------------T---------------------CGCAT----CCT-------------
droTak1 scf7180000415711:1522744-1522869 + AC-------------------------------------------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTCAGCAACA---A--------------------------------------------------------------------A--------AGT----ACCA-----
droEle1 scf7180000491212:2051743-2051910 - GCCGCCGCCGACAACTACAA---C----GACAAAACAACGACAAC------GAACGA----T----------AGA----------AGAAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCCCAGCAAT-ACAA-------------------------------------------------------------------------TGT-------------
droRho1 scf7180000767858:1774-1910 + GCCGCCGCCG---------------CC---------GAT------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACA---C--AA------------------------------------------------------------------TC------GT-------------
droFic1 scf7180000454106:760363-760528 - G---------------------------------------------------AACGGAGAATGGAAAAAGTAGAAAGGAGAGAGGAGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCATCAACA---A----------------------------------------------T---------------------GGCCC----AGCATTAGCCAGCGAC
droKik1 scf7180000302388:1458237-1458388 + GCCGCCGCCG---------------CC---------GCTGTC---------GCAG------------------GA----------ATAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACA---T----------------------------------------------G----------------AAGCAAGTGGAGATTGG-------------
droAna3 scaffold_13340:8622479-8622647 - dan_3 confident GTCGTTGTCG---------T---T----GC-----CGTT------GCCA---AAGGA---------------CCA----------AAAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATC-TCACTATCCTGCCAGCC-------------AG----C-------------------------------AAGCC----AG--------------
droBip1 scf7180000396708:224996-225167 + GTCGTTGTCG---------T---T----GC-----CGTTGTCGTTGCCA---AAGGA---------------CCT----------AAAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATC-CCACTATCCTGCCAGCC---------------------------------------------------AG-CC----AGC-------------
dp5 2:6480715-6480794 - dps_134 candidate-rescued -------------------------------------------------------------------------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCA-------------------------------------------------------------------------------------------------
droPer2 scaffold_0:306015-306151 - dpe_7 confident GCAGCCGCCG---------------CCAGG-----AGATGT----------GAAG-G---------------AGC----------CCAA-AGGATG-CCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCA-------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:11672681-11672863 - dwi_2 confident GACAACGAAA---AGGACGA---C----GA-----CGACGACGACGCCAACGAC------------------AGC----------AGCA-AAGATGTCCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCAAACAACA---A----------------------------------------------TAGCTGGAACTCCAATCAAGGAAGTGT----AGT-------------
droVir3 scaffold_12822:3936737-3936840 - dvi-mir-999 Known_mirbase G-------------------------------------------------------------------------------------------------CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCTAATCAACA---G----------------------------------------------C----------------------GAC---------------------
droMoj3 scaffold_6540:17209641-17209744 - dmo_1 confident G-------------------------------------------------------------------------------------------------CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGC-AGCCAAACAACA---G----------------------------------------------C----------------------GACC--------------------
droGri2 scaffold_8129:749-916 - dgr_1 confident GCCCAC------------------------------AAT------GGAT---AAGGA---------------CAA----------GAGA-CAGCAG--TCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCCAAGCAACA---AACGATGAC-------------CACCCAAAACG----GAAGCCAAAAT---------------------CGCTC----AGT-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCCGCCGCCG---------------CC---------GAT------------GAACGA---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C---------------------CAGCCACACC----------------------------AGCCACAGCAGCCC----AGT-------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................221129674.001296741494422121480627458970859970
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2112451.002451150076592246460
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2312271.00227147171252128417770
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2111814.00181489582131814312930
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................2311169.00116983379141108800
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................201940.00940110773567930
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................221824.0082463552254541260
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231504.005046112810613430
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................201230.0023098110211090
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221135.0013530112127640
..................................................................................................................ACATAGTCATACGGTGAATGTT..............................................................................................................................................................22195.009513223013440
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................23190.0090961703550
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18166.006640330560
..................................................................................................................ACATAGTCATACGGTGAATGTTG.............................................................................................................................................................23155.005550608360
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................21153.0053101113370
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19151.0051151012320
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................22151.005101807350
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24143.0043302011270
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23142.004210401360
..................................................................................................................ACATAGTCATACGGTGAATGT...............................................................................................................................................................21131.003121203230
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24128.0028110043100
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19127.002721300210
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22123.002380211110
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................23123.002303000200
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................22120.002030520100
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20120.002010110170
........................................................................................................................................................TGTTAACTGTAAGACTGTTCT.........................................................................................................................21213.502730001230
.............................................................................................ATG--CCGCTCAATTACCCCG....................................................................................................................................................................................19112.001220000100
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTC.......................................................................................................................22111.00114010240
........................................................................................................................................................TGTTAACTGTAAGACTGTGTA.........................................................................................................................21111.001100100100
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCA........................................................................................................................23111.001100000110
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................2119.0094400100
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG........................................................................................................................2319.0090000090
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2518.0087000010
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................1818.0082010050
........................................................................................................................................................TGTTAACTGTAAGACTGTGCT.........................................................................................................................2117.0071000060
.........................................................................................................................................................GTTAACTGTAAGACTGTGT..........................................................................................................................1917.0073000220
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................2216.0062000040
......................................................................................................................................................AATGTTAACTGTAAGACTGTGTCT........................................................................................................................2416.0061020210
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT......................................................................................................................2416.0060000150
........................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT.......................................................................................................................2315.0050000230
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCG........................................................................................................................2115.0055000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2414.0044000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT......................................................................................................................2414.0040000130
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................2014.0040300010
........................................................................................................................................................TGTTAACTGTAAGACTGTC...........................................................................................................................1913.0030010020
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................2313.0033000000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCTCT......................................................................................................................2213.0030000120
droYak3
A---------------------------------------------------AATCG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACAC--CA---G---------------CCACATCAGCCACATCGGCCAC-----AAA---------------------CCAGCTC----AGT-------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................221181089.001810891010937958317571600942421832739802160
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................22124376.00243761442028985751535160000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2312821.00282120763918515113323700000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2112746.0027461554446254110328800100
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................2212439.002439239127514920000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2111160.0011602057794891261460000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................2011011.0010119393814224120000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................231793.00793186573736932761080000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................231362.0036229606600000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................201287.002872831264162270000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231252.0025277245243259310000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................231158.00158355699132430000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................201144.001441400400000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221111.00111222326172750000
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19180.008057101000210000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................22153.0053411202610000
..................................................................................................................ACATAGTCATACGGTGAATGTT..............................................................................................................................................................22153.00530222261440120
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................20152.00523401800000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG........................................................................................................................23149.0049470200000000
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18145.0045352204200000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................21137.00372331100000000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCG........................................................................................................................20130.0030300000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24125.002512223870000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24121.002102292420000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTC.......................................................................................................................22121.0021112610100000
..................................................................................................................ACATAGTCATACGGTGAATGTTG.............................................................................................................................................................23119.001903123550000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23118.001813006800000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................21116.0016000041020000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22116.001636021130000
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19112.001221001800000
..................................................................................................................ACATAGTCATACGGTGAATGT...............................................................................................................................................................21111.001110013600000
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................18111.001160003200000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT......................................................................................................................24110.001050102200000
........................................................................................................................................................TGTTAACTGTAAGACTGTGG..........................................................................................................................2018.00880000000000
droSec2
GCCGCCGCCA---------CTGTAGTC---------GAT------------GAACGG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C--------------------------------------------------------------------AGCCC----AGT-------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................221105273.001052731300212625914770499
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2111750.001750123017651293
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2111578.001578123183861186
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................2311478.001478812591031035
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2311328.00132857164115992
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................2011006.0010062311726840
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231687.006872617042449
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................221412.00412678236227
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................201180.0018090131166
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221104.001041112279
..................................................................................................................ACATAGTCATACGGTGAATGTT..............................................................................................................................................................22166.0066814017
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24158.0058517333
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................21140.004005134
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24138.00380101117
..................................................................................................................ACATAGTCATACGGTGAATGTTG.............................................................................................................................................................23134.0034331117
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................23131.003176513
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................22130.003016122
..................................................................................................................ACATAGTCATACGGTGAATGT...............................................................................................................................................................21127.002705220
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19125.002541020
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20124.002416422
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19123.002314216
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18116.00163247
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................22114.001440010
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................21112.00128400
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................2318.0082105
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................2218.0084112
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................2217.0072104
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCG........................................................................................................................2117.0077000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA.......................................................................................................................2316.0061311
........................................................................................................................................................TGTTAACTGTAAGACTGTGTT.........................................................................................................................2116.0061005
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT......................................................................................................................2416.0060105
.........................................................................................................................................................GTTAACTGTAAGACTGTGT..........................................................................................................................1915.0053101
..........................................................................................................................................................TTAACTGTAAGACTGTGTC.........................................................................................................................1915.0053002
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................1815.0051004
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2514.0040031
........................................................................................................................................................TGTTAACTGTAAGACTGTC...........................................................................................................................1914.0040013
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCA......................................................................................................................2413.0030012
........................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT.......................................................................................................................2323.0064002
........................................................................................................................................................TGTTAACTGTAAGACTGTGA..........................................................................................................................2013.0030003
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCA........................................................................................................................2312.0020002
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT......................................................................................................................2412.0020200
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCTA.......................................................................................................................2412.0020110
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................2012.0021001
.............................................................................................ATG--CCGCTCAATTACCCCG....................................................................................................................................................................................1912.0020002
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................2312.0020101
droSim2
GCCACTGTAG---------------CC---------GAT------------GAACGG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C--------------------------------------------------------------------AGCCC----AGT-------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................221710080.007100805108171993030119347233455586479462154417150111212761868855114
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................22169628.0069628637871912329018001798614412083333000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................21121010.00210109156361398231917540623307180215177792480000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................22112616.001261610906665103510022112100000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................2318424.0084242944357370026421986186012162394352000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................2014602.0046024126802831800353710102001000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2313656.00365629571222532001011115629101500000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2111965.00196553875803310032933614210315810106
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................2411930.001930205800440302713406341550000
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................2011792.00179233190512747840226823525209000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................2311632.0016325315514210044127811480722105000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2511012.00101200090018713543023213231000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................201554.00554503143700000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221488.0048883611500504614212614212000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................231383.0038335452400000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCG......................................................................................................................241371.0037100002035100000000000
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................191336.0033629031410033886000000
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................221289.00289946281124925201751541246
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................181288.0028823165000658126000000
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................191286.00286303014128423225126012000
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................181282.0028281840917202042000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................231133.001332816309222518200100000
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................201123.001231150700000010000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................211107.001078311810011101000000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCG........................................................................................................................20193.0093854400000000000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................22192.00926204013108121000000
........................................................................................................................................................TGTTAACTGTAAGACT..............................................................................................................................16191.009100000011851849000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG........................................................................................................................23172.0072593900001000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA.......................................................................................................................23156.00560222008319172100000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................23155.00550000003229191100000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20154.005413201021311372000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGG..........................................................................................................................20153.0053493100000000000000
..........................................................................................................................................................TTAACTGTAAGACTGTGTC.........................................................................................................................19148.0048382100041020000000
.............................................................................................................................................................ACTGTAAGACTGTGTCT........................................................................................................................17145.00450000003123027000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGC..........................................................................................................................20140.0040362200000000000000
...........................................................................................................................................................TAACTGTAAGACTGTGTCC........................................................................................................................19139.0039380100000000000000
............................................................................................................................................................AACTGTAAGACTGTGTCC........................................................................................................................18134.0034292200000001000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23126.002650010042851000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24124.0024530100122100000000
........................................................................................................................................................TGTTAACTGTAAGACTGTCG..........................................................................................................................20123.0023182300000000000000
..................................................................................................................ACATAGTCGTACGGTGAATG................................................................................................................................................................20122.0022600021400000000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................21121.002160200025240000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22120.0020510100010111000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAC........................................................................................................................22119.0019162000000001000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTT.........................................................................................................................21119.0019100000051111000000
..................................................................................................................ACATAGTCGTACGGTGAATGTTG.............................................................................................................................................................23118.001800001325212200000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCG........................................................................................................................21118.0018121500000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA......................................................................................................................24116.001600000041920000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT.......................................................................................................................23116.001638000021200000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTGG........................................................................................................................22115.0015130200000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGG............................................................................................................................18115.0015132000000000000000
..................................................................................................................ACATAGTCGTACGGTGAATGT...............................................................................................................................................................21115.001550201510001000000
........................................................................................................................................................TGTTAACTGTAAGACTGC............................................................................................................................18114.0014140000000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT......................................................................................................................24114.001410100011370000000
..............................................................................................................................................................CTGTAAGACTGTGTCT........................................................................................................................16113.001300000017212000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC......................................................................................................................24113.001350100021211000000
..................................................................................................................ACATAGTCGTACGGTGAAT.................................................................................................................................................................19112.001230001601000000100
...............................................................................................................................................................TGTAAGACTGTGTCT........................................................................................................................15111.001100000000029000000
............................................................................................................................................................AACTGTAAGACTGTGTCTA.......................................................................................................................19110.0010000000000010000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.....................................................................................................................25110.001000000021610000000
........................................................................................................................................................TGTTAACTGTAAGACTGTTCT.........................................................................................................................2129.501930000024621010000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTTC........................................................................................................................2219.00990000000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTGC........................................................................................................................2219.00990000000000000000
...........................................................................................................................................................TAACTGTAAGACTGTGTCG........................................................................................................................1919.00970200000000000000
..................................................................................................................ACATAGTCGTACGGTGAA..................................................................................................................................................................1819.00950000300001000000
dm3
GCCGACGCTG---------T---AGCC---------GAT------------GAACGG---------------AGA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---C--------------------------------------------------------------------AGCCC----AGT-------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................2211396801.0013968010000284117237198354961537125606112052642012970111026670016587206067783237947637745627196799122332318240951431368894814544611991781556651661000000000000000000833823665593926231261662131082233405030234144125390240923862748291492941053589155301483534114205633201151237426750013239649511845303434363604174812568206665122268672000195181101029910231296818466834156512342179108617989521278138847663551851918224730285017792710722675330625022389251123529023333757178523008778168110853037046066067381808637839911167953812122764711151883167144237822733495003371005123513529901952235976411111172844219479151911510982445095162495091516392290168001782141523105376509469551385681546312491380332439121526155419861926180661810632584154288520131737331387311432396128971073639525861440029571514126451652020521417676757462261174731333800847659455194774260902008120842122612394320741018861447369771558737961964220817756966097815556130184841613977516336498668971138861754096100771128106352211681580374871274698251066195913870228973531814026
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................23132602.003260200000010000000100100792110570000000038159744184584924654929903938218000000000000000000000002210190001011000204403001080101010313004113450180161593113313150000312000011930320729514112184240719429106608133000000002002529016201828221055151002013084111063211732051146211000008835500300091676732181846174543774432108200059035000109033547712454123747315915720515458484516820656356932834972530516314212572976427211359323307332205394936221973677246531063156241101366685616651967538837719451782849726223160527338410583027566225161391030
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................21126690.00266900000400001000010302020442130434102128271201690149617822347771210720373414419005110000000000000000028421827110002120037043601000076011432001000133190779170117051520473010359164116000014000020385986172527194437173449831852201341332375243317013418104822032292271854721873271541602293735424640015025304821920113501200025311737752592986374110160101451921331357510526210017302541122211192721794383512162091622094181335218398309223141311593976131510156387519918722406994093775310461459621511544721593431001172457125125625135323153648810183466911515856339917141252619917817610316912747889282080
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................23124983.002498300000000000000100400611530423000000001223101511218451413162314454073101401500000000000000000000022550100000100010010000005000100010100001220090212815122944226000003000042766244222730494732674151722901000106700851050633056727651913184120202201682326421000014345340000125270000001924129377346181219111886421884170028594323002328053173416076261272593087195141933383098712393521458212415441843232278935211517961197448342984017223506525895696822950773771582073872123292689023430247338613423132071811239954118341736120215162163141422823411320115515724061969510
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTATC.....................................................................................................................25121859.00218590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140107849000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................22121698.00216980000200000001000002045136009000000001815161820125401161513122476722017010000000000000000000003040223261020163101701455001019011540321200102814080894201442218000004000012416334236250867589233570762911283118856482046666052223237137046148304265014912101137900016114581101040950000002520225586253030511830328335818513925941655364001060223012132491438311146814235246514312227913947696181262161245281149924915422541634105526314319317312620523775495145504469303895841161746714323366309820718526558255391122213259851385135330265692001692922823240
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................21119448.0019448000000000000001000201503021504613188290120911611249115461041015131042600000000000000000000026352531202001310001100120100003816466432100104136632360433417121061513012800000300001123920111426222816222572831022169028192219454472029664763391520781465221001115292320310783002061807170514000000176192731414916291960104583021706044210043172565427518183126102611319613752153111558424363114658925333262212389912683897658674691728976361441402221692229093105741072776291102402871238811929161294993711192432982201091703981911323142989749876811899101569170145961345
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................23115148.001514800003200000000000040100100201699980123547204332510591025420410010000000000000000002815710011000301105111111251141017811001111459331170281879211015100000010000411414071113189141371033650211004001562240151004911761121169026420212101703596000306101819018118150000001115314235131052340921025139116200230001521027113712997012364012031518275135222910111221337265752314417125342412414017643972766885174591412331224911336264215647174258463173236102830334939537758212917192526498223401074911480123511774459927
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................20110714.001071400001000000000500000021905141923286880522912211217523422310340100660000000000000000008101211000000000000005110000110000000000000109122457056139709740156742000000000047171855645816811184105007761107614506347252010233852885308848030720901253012700412326020002400420013191010171038101569913639221222800005304704760201634228425353912546810185925146931894105715131118147891731373281344564521058331148163020291363113814143156667383719113715388931811020986034394759521542914660
..................................................................................................................ACATAGTCATACGGTGAATGTT..............................................................................................................................................................2214914.0049140000800112101101002020020200145477001334110912120751827100008830000000000000000076613953129155171912520421651841217352623212645584130312848026140150641302151200200000002120062018422622610115000007057346201511611801270079245717441014935280076566000106400000200030007941182436411423524158133162005900002616045101197541010311882131161043191741642912915762192828310241319213263530522772241349416881451213920220145941111620232314221113925397373548412951131030
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................2414350.0043500000000000000000000011100000000000034166311612516341442200000000000000000000000000000000010000000000100000000000000000301000011100001000000000029885756172376010402111700000000000002501000300160300002039231215000502150000029670000000002120524891628000001002101000104404100106100000010100000143654874069068198602000231271262621064449363117707110011229333010221011002038921861455004010
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................2213137.00313700001200301110000030010010150000000011412083004005972101000000000000000000000363440000200300800200000010100100000100001330301121201011770000010000110201553387163759010001200210292702203112902402103520060043414590006051000000161700000010044281610256311711447007211300220481101333151100116022114101113111054178281663519420148060227685911224141418123349263823713171112255860742181101232627215272012288018050
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC......................................................................................................................2412123.00212300000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000010000000000001000010000000000000300000000000000000000000000000000000000000001327766000000000100100101000000000000000000010001000000011000000001100000000000000000000000100210005110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2511910.001910000000000000000000000100000000000002110100124105004130200000000000000000000000000101800200000000000000000000000000000000000000000000000000000444292871503911803010000000000000000000000000010000001721720000180000010790000000001021641291735727000000000100000001000000000000000000000000392754017857351714010003110132000421127245201010078513700000000000100718115000000
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................2011234.00123400000000000000000000000000110000000001000010000020200000000000000000000000000012000000010001000000001100100000000000010000000102100000000000100002011000000000020380134712018010844981104004900600000000004000000000000010101015161410558100110001000020001200711103200130100300111157451832011352602736294770562630010232371131111014116637229142336741181837140
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCATC......................................................................................................................2411220.0012200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863357000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................2211075.00107500000000010000000110000100100000000000000000000021201000000000000000000000000000000000004001000000000300000000000000410301018051320000000000000000110000000000000010101226012022160718501062000102011100000005000000000000000001120001200810000000000160210360600011911100000100101224332424282549414213946124301432602534829000100021112002001726311212120
..................................................................................................................ACATAGTCATACGGTGAATGT...............................................................................................................................................................2111035.001035000000000000000000001200002000000000001000100011101110001000000000000000000002220000000100210150010010000300000000002000000000002000000000022200052633100300000000110899081013030145136004017243400001100000022200000222313642230233113131012000030011410004010131062225132307144065540505160553421117492320123215062111225785185142171242864781214101367310033823830
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................2411031.00103100001000000000000000000200100000000000110020102000211000000000000000000000001000000000000001000000000000000000000000000200120003000000000002220113012000000000000000004020032000308200010030410001050000001000000014003011101100110012000010122440314221503418911204602141612101711211207029015191216130120235264227404247129544471140125534813912141027491060
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................231897.008970000100000000000010000110010000000000000022001007120000011100000000000000000010120001000003000011000010001000001000228050148010900000000000041021411040111102000000000710060044190705000000150000000100000000010000001003411951595272000381800330210021041201410306410100011111021024309286464123540220231931101355151181214142710272101031443433120545655320115390
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................181841.0084100000000000000010000010000079119112026000000000000000000000000000000000000000000201010000000000000000000030000500000000061000000013851100000000000000001000000000000000000024011372120197011340000060000000000003000000000001000000002200000010000000001000001000000000000010011111010204061101100025570000000000101010000010100000000500001101010
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................191762.0076200000000000000000000000000133182333500000000000000100000000100000000000000000413000000000000000000000000000000000000020000000002422001000000002100001102004110200100100217058404923446310501011010010000000022012000000000001204144444144104393610000011000001101010400201300042421103011000403050015141728101000110011006014001010010011013020001031230
..................................................................................................................ACATAGTCATACGGTGAATGTTG.............................................................................................................................................................231688.0068800001000000000000000000000000000000020001231001110110000010000000000000000000010000701200013106000001501340030000100120100140000000000000000000312351630020000010200067060011101004070020004000000000100000000000000211573002010311000010000020031521420101220211021102001531100305011011534572319439242310173374101137702014205248252111341537313061311020
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................231613.00613000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000004101021302110000000000002371002130200000000000000440200130109010000000913000000000000000100000000003021010000300000300000040000180100100800000000403010121621101213110000494430612033015345172882201112010200300103109132040019110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA.......................................................................................................................231552.0055200000100000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857211013000020000000030000000000000000000000027030000108000001500000000000002154932200002000000000000000000000000000000020000084510731052103701120521424120131218141612000772528000202400002411721603000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT......................................................................................................................241544.0054400000000000000000000000000000000000000100000000010001000000000000000000000000000000000000001000000000002000000000000000000000000000000000002400000011000300000000006002010000000102000000010210002020000000000000000003022112210200012541430000000000012010000010000000000110000605017230100021641010053244102001022100000000201400012000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................211505.00505000000000000001000000000000000000011000000200000000000000000000000000000000010010000000000000000000000000000000000000100050701012000000000000000000011010000000000300118011021040100140000104000100000000000000000000010011002022110000000001000200001800000002000000001000011171027031200221142445217501160160670119600002020010416933132214020
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................221483.0048300000000000000000000000200100000000000000100001000100000000000000000000000000241000000000000000000000000000000000000310010231911000000000000000000000020100000000000000960300321402150000107101000000200000001000000210212100122022440050000100030001210200000110000100016010105040120406401272425342120310601802811317912320011302035723424101040
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................191300.00300000000000000000000000000000000000000100000000010010000000000000000000000000011200000100000010000000000000000000100004000001101009600000000000000002100100000000020001557160300117122020000601021000000000000000000000000100100101100001000000001001000001001200010010000020001000721011208101058913311041111154020312141020002123420110201020
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC......................................................................................................................241299.00299000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001100000000000000000000000000000000002000000000000000000100000000000000000010000101010000016898000000000000100000000000000000000000040100010000001021000102022000100011000000000000100000000010
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................201279.002790000000000000000000010000120010300000110000000000011000001100000000000000000111000000000000010000000000030000000000001000001319022100000000000000000010100200000002000003301001411030100001030001000001000000000000002020011020121101521000000010213000110003001000210002220110609270023102121330001011020520300921357141324300512410710030
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................181261.00261000000000000000000000000011000000000000000000000000000000000000000000000000032300000000000000000000000000000000000001000000001001000000000010100111000000000000200001321008002101905010000511311000000000000000000000000010020110100100000000000000000000000000000000010202000031426040501601231041428210101012112080010101002010022211000000010
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................221241.002410000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000100000000000000000000000000001000000000000000001000000112002000000000005303000123010500000000100000001000000000000001003021000100000000320000002020020113002136001201000111013417040425201053340000101401111142041112421510100410010329330
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................211238.002380000000000000000000000000010000000000000000000001001000000000000000000000000002100000000000000000000000000000000000000000110010000000000000111000000300030000100052000100002000011300000040100000000000000000000007021000301220030002000000000112000000000002000011000101105285263821310001011050010001426230002528130022302001100000210210
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................231178.001780000000000000000000000000000000000000201010000000000100000000000000000000000010000000000000000000000000000000000000000000000010000000010000050001030200000000000000000000000001000300000001304000000000000030000000000000112002200000000001000000001000000000000000000100003262213290900000101210000312410010001111000000000002001412000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................221166.001660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001112002120000000000000001000001010200000000001000000000000000000000000000000000000000730010000000000002000000000000000000007264170707101002000000000010160001101114020200700000502301001130
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT.......................................................................................................................231155.0015500000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000110300001100000000000000010000000000000000000100010000000000001000000000000001101001100011000000001000100120000000000100402000016120131501011411050010043341112023121200001001011243122108010
droEug1
GTCGCCGC------------------C---------CAT------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCTGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACAATA-ACAA-------------------------------------------------------------------------TGT-------------SizeHit CountTotal NormTotal
No Reads
droBia1
GAC------------------------------------------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACA---G--AA------------------------------------------T---------------------CGCAT----CCT-------------SizeHit CountTotal NormTotal
No Reads
droTak1
AC-------------------------------------------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTCAGCAACA---A--------------------------------------------------------------------A--------AGT----ACCA-----SizeHit CountTotal NormTotal
No Reads
droEle1
GCCGCCGCCGACAACTACAA---C----GACAAAACAACGACAAC------GAACGA----T----------AGA----------AGAAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCCCAGCAAT-ACAA-------------------------------------------------------------------------TGT-------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCCGCCGCCG---------------CC---------GAT------------GAAC------------------GA----------AGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACA---C--AA------------------------------------------------------------------TC------GT-------------SizeHit CountTotal NormTotal
No Reads
droFic1
G---------------------------------------------------AACGGAGAATGGAAAAAGTAGAAAGGAGAGAGGAGAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCATCAACA---A----------------------------------------------T---------------------GGCCC----AGCATTAGCCAGCGACSizeHit CountTotal NormTotal
No Reads
droKik1
GCCGCCGCCG---------------CC---------GCTGTC---------GCAG------------------GA----------ATAA-AGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACA---T----------------------------------------------G----------------AAGCAAGTGGAGATTGG-------------SizeHit CountTotal NormTotal
No Reads
droAna3
GTCGTTGTCG---------T---T----GC-----CGTT------GCCA---AAGGA---------------CCA----------AAAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATC-TCACTATCCTGCCAGCC-------------AG----C-------------------------------AAGCC----AG--------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................22191653.009165336182745461153491072658754
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................2315606.00560610523498127123905
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2111066.00106639944190153586
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................2411060.001060712134183733
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................2211012.001012129111241351
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................211956.0095634614150173372
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231596.0059610241885151272
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................201572.00572103212680351
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................231517.0051781006146392
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................201131.00131321132866
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................22197.00977111401226
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT.....................................................................................................................25154.0054500251311
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22151.005111012334
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24144.00442429126
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19139.00396203820
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................22136.0036862947
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23132.00322008418
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................23125.00251111633
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................22124.00248001213
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTTT......................................................................................................................23122.00221000219
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18118.00182100411
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20114.0014101165
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................18114.0014020309
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC......................................................................................................................24112.0012010155
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19112.0012100533
..................................................................................................................ACATAGTCGTACGGTGAATGT...............................................................................................................................................................21111.0011130115
..................................................................................................................ACATAGTCGTACGGTGAATGTTG.............................................................................................................................................................23111.0011200414
........................................................................................................................................................TGTTAACTGTAAGACTGTGTA.........................................................................................................................2119.009000036
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2519.009017010
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................2118.008250001
.........................................................................................................................................................GTTAACTGTAAGACTGTGT..........................................................................................................................1917.007000142
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT.......................................................................................................................2317.007000313
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA......................................................................................................................2417.007061000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTT.........................................................................................................................2117.007100312
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT......................................................................................................................2416.006100005
........................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT.......................................................................................................................2316.006000015
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................2216.006100113
..........................................................................................................................................................TTAACTGTAAGACTGTGTCTT.......................................................................................................................2115.005200003
........................................................................................................................................................TGTTAACTGTAAGACTGTTCT.........................................................................................................................2154.20211000218
.......................................................................................................................................TGTGTATTGGAAAGCAATGTTAACT......................................................................................................................................2514.004010111
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC......................................................................................................................2414.004003100
droBip1
GTCGTTGTCG---------T---T----GC-----CGTTGTCGTTGCCA---AAGGA---------------CCT----------AAAA-AGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATC-CCACTATCCTGCCAGCC---------------------------------------------------AG-CC----AGC-------------SizeHit CountTotal NormTotal
No Reads
dp5
-------------------------------------------------------------------------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCA-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................22182830.0082830717258473778209623464153493359267813815295
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2118683.008683711991232134813212565266737541700
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................2216526.0065263417510894997164222597220
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................2013474.003474790258734616587246420570
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2112643.002643424617601641277416
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................231450.00450019741229705333448
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................191346.003460750122241017161
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221321.00321015351410191358445
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................231245.00245541995652191512
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231241.002410135023721152380
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................201217.002174181017246003
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................201201.00201018603123006
.........................................................................................................................................................GTTAACTGTAAGACTGTGT..........................................................................................................................19168.006806600100001
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................23155.005508578710163
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24149.0049028001400700
........................................................................................................................................................TGTTAACTGTAAGACTGTGC..........................................................................................................................20145.004501040111010
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................21144.0044126214001000
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19137.003703001311010
........................................................................................................................................................TGTTAACTGTAAGACTGTGTT.........................................................................................................................21136.003608000312193
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................25130.003012010200600
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22124.002402400000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................23123.002300419000000
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18122.002201605100000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................22122.00221321132360
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24122.00220600136150
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCA........................................................................................................................21117.001701600000100
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................18116.00160500011261
........................................................................................................................................................TGTTAACTGTAAGACTGTGTA.........................................................................................................................21115.00150206100042
........................................................................................................................................................TGTTAACTGTAAGACT..............................................................................................................................16112.00120000000507
..........................................................................................................................................................TTAACTGTAAGACTGTGTC.........................................................................................................................19111.00110800001011
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................20111.001101010000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................22111.001101100000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................23111.00110900000110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23111.001101100000000
.........................................................................................................................................................GTTAACTGTAAGACTGTG...........................................................................................................................18110.00100900000001
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................2219.0090403010010
........................................................................................................................................................TGTTAACTGTAAGACTGTGA..........................................................................................................................2018.0080201030011
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................2017.0070115000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................2117.0070001022110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAA........................................................................................................................2216.0060400000200
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA......................................................................................................................2416.0060600000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT.....................................................................................................................2515.0050000000050
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAC........................................................................................................................2215.0050023000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA.......................................................................................................................2315.0050200120000
..........................................................................................................................................................TTAACTGTAAGACTGTGT..........................................................................................................................1814.0040300000001
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.....................................................................................................................2514.0040200000020
........................................................................................................................................................TGTTAACTGTAAGACTGTGTGC........................................................................................................................2214.0040004000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT.......................................................................................................................2314.0040102001000
...................................................................................................................CATAGTCGTACGGTGAATGTT..............................................................................................................................................................2114.0040300010000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCAA.......................................................................................................................2214.0040400000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA......................................................................................................................2414.0040010000021
........................................................................................................................................................TGTTAACTGTAAGACTGTT...........................................................................................................................1913.0030200010000
droPer2
GCAGCCGCCG---------------CCAGG-----AGATGT----------GAAG-G---------------AGC----------CCAA-AGGATG-CCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCA-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................22150473.005047369954956116115536160155810
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2114470.0044703153494512681944549
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................2013077.0030779154115831385935
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................221737.00737520438487345
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................211676.00676124924503484
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................221338.003381417312916015
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................231327.00327624149110785
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................231214.0021438116459024
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................221209.0020918491681
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221152.001522462286212
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231134.0013411472518267
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................201133.00133793601044
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19159.005901208345
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20140.00400290137
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................23134.00340304261
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18134.00342160232
..................................................................................................................ACATAGTCGTACGGTGAATGTTG.............................................................................................................................................................23133.00330008223
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................18127.00271641213
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19123.0023761522
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24123.00230149000
.........................................................................................................................................................GTTAACTGTAAGACTGTGT..........................................................................................................................19123.00230170114
........................................................................................................................................................TGTTAACTGTAAGACTGTGC..........................................................................................................................20115.00152001102
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................25114.0014275000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24111.0011100424
........................................................................................................................................................TGTTAACTGTAAGACTGTGTA.........................................................................................................................21110.0010000451
........................................................................................................................................................TGTTAACTGTAAGACTGTGTT.........................................................................................................................2119.009020151
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................2318.008070010
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................2017.007700000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................2317.007020140
........................................................................................................................................................TGTTAACTGTAAGACTGTGA..........................................................................................................................2017.007000421
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGT..........................................................................................................................2116.006000213
..................................................................................................................ACATAGTCGTACGGTGAATGT...............................................................................................................................................................2115.005010130
........................................................................................................................................................TGTTAACTGTAAGACTGTC...........................................................................................................................1915.005210002
..........................................................................................................................................................TTAACTGTAAGACTGTGTC.........................................................................................................................1915.005120011
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................2215.005050000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................2214.004030010
..........................................................................................................................................................TTAACTGTAAGACTGTGT..........................................................................................................................1814.004020002
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA.......................................................................................................................2314.004031000
droWil2
GACAACGAAA---AGGACGA---C----GA-----CGACGACGACGCCAACGAC------------------AGC----------AGCA-AAGATGTCCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCAAACAACA---A----------------------------------------------TAGCTGGAACTCCAATCAAGGAAGTGT----AGT-------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................221482108.00482108354576914074671599494931
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................22131935.003193531701281749140
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................2215759.00575957480236
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2114948.004948396968107179625
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................2013791.003791357272817122
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................2311888.00188841130452371165
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2111631.0016313718831924334
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2311033.00103377591684149
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231848.008481054922345327
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................201509.005095297761310
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................221433.00433188144122105
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................201342.003423420000
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................191321.00321248103258
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................181203.0020314343548
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................221104.0010438101946
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................20188.0088880000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................23180.0080790010
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24177.0077604859
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24167.0067051601
..........................................................................................................................................................TTAACTGTAAGACTGTGTCG........................................................................................................................20166.0066651000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................23137.00371610515
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................25130.0030072210
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................21128.0028271000
...........................................................................................................................................................TAACTGTAAGACTGTGTCC........................................................................................................................19128.0028280000
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................18124.0024184110
..........................................................................................................................................................TTAACTGTAAGACTGTGTC.........................................................................................................................19121.0021190002
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG........................................................................................................................23118.0018180000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22118.001819026
........................................................................................................................................................TGTTAACTGTAAGACTGTCG..........................................................................................................................20118.0018180000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23117.0017420011
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................22117.0017100034
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19116.001661117
............................................................................................................................................................AACTGTAAGACTGTGTCC........................................................................................................................18114.0014131000
..................................................................................................................ACATAGTCGTACGGTGAATGT...............................................................................................................................................................21114.001444222
........................................................................................................................................................TGTTAACTGTAAGACTGTGTGG........................................................................................................................22113.0013130000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAC........................................................................................................................22113.0013130000
........................................................................................................................................................TGTTAACTGTAAGACTGTGG..........................................................................................................................20112.0012110001
..................................................................................................................ACATAGTCGTACGGTGAATGTTG.............................................................................................................................................................23111.001100083
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................2019.00926001
........................................................................................................................................................TGTTAACTGTAAGACTGTC...........................................................................................................................1918.00850111
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT.......................................................................................................................2317.00740201
......................................................................................................................................................AATGTTAACTGTAAGACTGTGTCT........................................................................................................................2416.00660000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT.......................................................................................................................2316.00600015
...........................................................................................................................................................TAACTGTAAGACTGTGTCG........................................................................................................................1916.00660000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTA.........................................................................................................................2116.00610005
........................................................................................................................................................TGTTAACTGTAAGACTGTGTGC........................................................................................................................2215.00550000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAA........................................................................................................................2215.00520210
...........................................................................................................................................................TAACTGTAAGACTGTGTC.........................................................................................................................1815.00550000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT......................................................................................................................2415.00510013
........................................................................................................................................................TGTTAACTGTAAGACTGTGTTC........................................................................................................................2215.00550000
droVir3
G-------------------------------------------------------------------------------------------------CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCTAATCAACA---G----------------------------------------------C----------------------GAC---------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................221507491.0050749114535103173129494499420137670110348373964291907132727141433493107911505254949201177113678072420341691124314475641620907321700164588391240970247511039167535181048821767144290717671371825108584451534830757178304314395412769681206520145122917152231692270515116128282116414697755218848186553740139539
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................22110087.001008712564991220005710287103222010014311463101415121028528179113100000000000110100015229704122318290535432276237354851114146
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................2317866.0078662154416012174323744715587510325201401100318214486225155252212391471115322027819719314100000000000000000191261307053669653280908366717596219242247395463
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2115111.005111248437721792623222138951729281811312013381424391524392756573585362729451926153916742976133141371045320451024664051231537416215615311310415711410610599234233
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................2314027.0040273776428562412118146471141562653924144820119306079565210010930318354212416276478111020201001010011002470211580584723921813211411274799396654655134144
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................2212008.00200857154000000000000100000000000011101000000011410022202004210208200146020673263428173647216214841
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................2411837.0018370080185401424239693101000020046392969286511492154123227799940000000000000000000333201991371254471002553245407476
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2311786.0017861548115370196589131239410164314155136734732213542110011012628832310430107932073756738118115505996831715144443
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2111384.0013847687419105010113166631362313334242247273411041111011010000000021521260233546263932251430211114103035
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................2011340.00134012716323881814903143014421562417738783115511397425141345900000000100000000000416242012154340150200221013103025
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................2211192.001192199115014210005421021113181272295241124015181817193001000010010000000151960153218224856744354348429787
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................2511086.001086001801001008011225000001000183617651922025412875168318930000000000000000000300030891112160011101319214044
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA......................................................................................................................241560.0056000110000000000000000000001100000002010000001211000000000001100002103934017211810971121406787
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................201553.005539378402021001001001000111111000100000000011010000000000000630006300077212204164830223
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................221410.0041026171321217030000024571197581377277623100120016400000011100100211042174091922315241610191812000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................231268.0026810406149105202123001113016114418710223100011324000000000000000000061120131115312312512756
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................241226.00226055010533500322114101232319833337037335100000000000000000001978025584710658231447
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................191148.00148033001030610001102005000001210161226060100090010001020000000013010001142002113200121
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC......................................................................................................................241123.001232221121002001000000070131000103390300000600100000000000000000100003624655101114040
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA.......................................................................................................................231109.00109002010000000000000000002335203001024554000000000000000000001000402613300100133354
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCC......................................................................................................................241109.0010991401910000000000000110020102110211030000390000000000000000000002000010211045400000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23199.009901202050201000000000300711101201102303400000000000000000000090010139100100012478
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.....................................................................................................................25172.007200200000000000000000001002520000703610620000000000000000000000000394101110010230
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19170.0070119110201001001030000000221000000000000100000000000000000010001003031244302000001
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................23166.006625707000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18163.006301370103000000010000000010010000000110100000000000000000010002100055300322420012
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................20161.006115703000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA.......................................................................................................................23157.00570000000010001000000030030110100100233100000000000000000000001000079200000002357
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT......................................................................................................................24155.005500001020000000000000100132100300102152200000000000000000000100000710000000031123
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT.......................................................................................................................23149.00490000000000000000000000000010000000010020000000000000000000001000042158114611424
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTA.....................................................................................................................25144.00440000000010000000000000000110000010231000000000000000000000010000025039205110131
........................................................................................................................................................TGTTAACTGTAAGACTG.............................................................................................................................17144.004400000000000000000000000000000000000000000112120211310033021200000021100000030020
..................................................................................................................ACATAGTCGTACGGTGAATGTTG.............................................................................................................................................................23142.00420011001120000040112301200110101001110100000000000000000000008201010000000010001
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCA......................................................................................................................24136.00360000011000011000000010011011000000043032000000000000000000020000013400010011002
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................18134.00340600001000000100000000101001210000010001000000000000000000003000033401000100012
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.........................................................................................................................22129.002901202000000000001010000000000000000000000000000000000000000005001000012130000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT.....................................................................................................................25124.00240010001000000000010000210114000001010000000000000000000000001000010111200000021
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTATA.....................................................................................................................25122.00220000000000101000000000000100000010000010000000000000000000000000045110011020011
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG........................................................................................................................23120.002001800000000000000000000000000000000000000000000000000000000000000000001010000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCAA.....................................................................................................................25117.00170000000000001000000000000001100020131120000000000000000000010000000000000011001
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................20116.001601302000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................ACATAGTCGTACGGTGAATGT...............................................................................................................................................................21115.00150040001000000000000000000010000000000000000000000000000000110000400020010000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................21114.00141931000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................22114.00140050000010001000000000000000000000000000000000000000000000001000002200000020000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20113.00130061000000000000001000000000000000000000000000000000000000001000001020100000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA......................................................................................................................24213.00260020000000000000000000020000000020007020000000000000000000000000033200000001002
..........................................................................................................................................................TTAACTGTAAGACTGTGTCG........................................................................................................................20112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAA........................................................................................................................22112.00120000000000000000000010000000000100001100000000000000000000000000012300000000011
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCC.....................................................................................................................25110.00104000010000000000000010000000010000000000000000000000000000000100000000002000000
.............................................................................................................................................................ACTGTAAGACTGTGTCT........................................................................................................................17110.00100000000000000000000000000000000000000000000000000000000101000000111200000020001
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTCA.....................................................................................................................25110.00100000000000000000000000000000000100010000000000000000000000000000000020100100220
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC......................................................................................................................24110.00100000001000000000000000000000000000000020000000000000000000000000020120000010010
........................................................................................................................................................TGTTAACTGTAAGACTGTGTT.........................................................................................................................21110.00100000000000000100010000000000000000010000000000000000000000003100010020000000000
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................2219.0090020000000101200000000000000000000000010000000000000000000000001000000000000001
........................................................................................................................................................TGTTAACTGTAAGACTGTGA..........................................................................................................................2019.0090000000101000000000000000000010000000000000000000000000000002000010000000011100
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT......................................................................................................................2419.0090010000000000000000000000000001000000000000010000000000000001000000000010010120
........................................................................................................................................................TGTTAACTGTAAGACTGTGG..........................................................................................................................2019.0090800000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCTA.......................................................................................................................2418.0080000003000000100000000000100000000001000000000000000000000010000000000000000010
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCA.....................................................................................................................2518.0080000010000000000000010010000000000000002000000000000000000000000000020000000100
........................................................................................................................................................TGTTAACTGTAAGACTGTGTA.........................................................................................................................2118.0080002001000000000000000000000101100010000000000000000000000000000010000000000000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCT.....................................................................................................................2518.0081100000000000000000000000000000000000000000000000000000000000000010002001200000
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTCC.....................................................................................................................2517.0070100000000000000000000000000020200000001000000000000000000000000000000001000000
droMoj3
G-------------------------------------------------------------------------------------------------CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGC-AGCCAAACAACA---G----------------------------------------------C----------------------GACC--------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................22172344.00723441316820481064218663213746449
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................2215784.0057841821526571310
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................2111394.00139412621119273837
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................2111178.001178799160305510115
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................231996.0099688802724533469
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................201515.00515175143271772
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................221312.003122812172720424
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................231262.00262735636461338
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................231177.0017737820374530
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................231125.0012518418383116
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................20196.009666034167
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................24168.006805193806
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................22163.0063152816175
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................23150.005080132513
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA......................................................................................................................24143.004313160239
........................................................................................................................................................TGTTAACTGTAAGACTGTG...........................................................................................................................19132.00327171421
...........................................................................................................................................................TAACTGTAAGACTGTGTCT........................................................................................................................19130.00301602372
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.....................................................................................................................25125.00251800007
..................................................................................................................ACATAGTCGTACGGTGAATGT...............................................................................................................................................................21120.0020701291
........................................................................................................................................................TGTTAACTGTAAGACTGTCC..........................................................................................................................20116.00160000160
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCC........................................................................................................................21115.00151000122
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................20113.00131000111
..................................................................................................................ACATAGTCGTACGGTGAATGTC..............................................................................................................................................................22113.00130000130
............................................................................................................................................................AACTGTAAGACTGTGTCT........................................................................................................................18112.0012600051
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCG........................................................................................................................22111.0011102521
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTT.......................................................................................................................2219.009900000
..................................................................................................................ACATAGTCGTACGGTGAATG................................................................................................................................................................2017.007200113
........................................................................................................................................................TGTTAACTGTAAGACTGTGTGC........................................................................................................................2217.007010060
........................................................................................................................................................TGTTAACTGTAAGACTGTGTAC........................................................................................................................2217.007000250
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................2016.006100050
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTA.......................................................................................................................2216.006600000
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC........................................................................................................................2315.005000050
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTAA......................................................................................................................2315.005500000
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................1815.005002300
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC......................................................................................................................2414.004010102
droGri2
GCCCAC------------------------------AAT------GGAT---AAGGA---------------CAA----------GAGA-CAGCAG--TCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCCAAGCAACA---AACGATGAC-------------CACCCAAAACG----GAAGCCAAAAT---------------------CGCTC----AGT-------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCT........................................................................................................................2221880.00376014552305
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCT........................................................................................................................21289.001781708
........................................................................................................................................................TGTTAACTGTAAGACTGTGTC.........................................................................................................................21256.001123082
........................................................................................................................................................TGTTAACTGTAAGACTGTGT..........................................................................................................................20247.00942470
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT.......................................................................................................................23223.00461333
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCC........................................................................................................................2226.5013112
..................................................................................................................ACATAGTCGTACGGTGAATGTT..............................................................................................................................................................2226.0012102
..........................................................................................................................................................TTAACTGTAAGACTGTGTCT........................................................................................................................2025.501192
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA.......................................................................................................................2325.001019
.......................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT........................................................................................................................2324.00844
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT......................................................................................................................2423.00606
.............................................................................................CAG--TCGCTCAATTACCATG....................................................................................................................................................................................1922.00440
..................................................................................................................ACATAGTCGTACGGTGAATGTTG.............................................................................................................................................................2321.50303
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC.......................................................................................................................2321.50303
.........................................................................................................................................................GTTAACTGTAAGACTGTGTC.........................................................................................................................2021.50330
.........................................................................................................................................................GTTAACTGTAAGACTGTGT..........................................................................................................................1921.00220
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG.......................................................................................................................2321.00220
..........................................................................................................................................................TTAACTGTAAGACTGTGTCC........................................................................................................................2021.00211
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCC......................................................................................................................2421.00202
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.....................................................................................................................2520.50110
............................................................................................GCAG--TCGCTCAATTACCATG....................................................................................................................................................................................2020.50110
.........................................................................................................................................................GTTAACTGTAAGACTGTGTCTGC......................................................................................................................2320.50110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCA........................................................................................................................2220.50110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCC.....................................................................................................................2520.50101
........................................................................................................................................................TGTTAACTGTAAGACTGT............................................................................................................................1820.50110
..................................................................................................................ACATAGTCGTACGGTGAATG................................................................................................................................................................2020.50110
........................................................................................................................................................TGTTAACTGTAAGACTGTGTCTACA.....................................................................................................................2520.50110

Generated: 10/20/2015 at 07:37 PM