ID:

der_240

 Coordinate:

scaffold_4770:4217721-4217863 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.6 -37.6 -37.5 -37.5

Flybase annnotation

intron [Dere\GG14417-in]; utr3 [utr3_minus_8345]

No Repeatable elements found

Sense Strand Reads

TATATATGTATATATATCGACATAAAACCCGCCGCCTCGTCAGCAATCGTCCTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCACTGACAACACTGACCGCTCCAGGGCCAATTGTTCATTTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAACATGCATCCACAACATCTCTCGCTCTATCAGCTCTCTCCTTTTCTATGGCTGTCCAG

**********************************************************.((..((((.(((((.(((((.((((((((..(((((..(((((......((......)).....)))))...................)))))..))))))))))))).))))).))))..))...********************************************************** 		Read size # Mismatch Hit Count Total Norm Total V108

head

 M057

embryo

 V107

male body		 V060

head

 V040

embryo

 M055

female body

 GSM1528801

follicle cells
.....................................................................................................................................................TAGCACCATGAGATTCAGCTC......................................................................... 21 0 1 29289.00 29289 18464 4518 1965 2259 1652 429 2
.....................................................................................................................................................TAGCACCATGAGATTCAGCT.......................................................................... 20 0 1 3562.00 3562 2738 66 360 262 102 34 0
.........................................................................ACTGAATTCTCGTGGGTC........................................................................................................................................................ 18 0 1 1892.00 1892 1731 4 63 32 0 62 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCT........................................................................ 22 0 1 1355.00 1355 1115 25 45 87 55 28 0
.........................................................................ACTGAATTCTCGTGGGTCTGC..................................................................................................................................................... 21 0 1 1080.00 1080 588 7 260 83 6 136 0
.........................................................................ACTGAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 0 1 1032.00 1032 343 40 172 32 13 432 0
.........................................................................ACTGAATTCTCGTGGGTCTG...................................................................................................................................................... 20 0 1 798.00 798 309 1 218 39 1 230 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCA........................................................................ 22 1 1 705.00 705 557 15 36 61 30 6 0
.........................................................................ACTGAATTCTCGTGGGTCT....................................................................................................................................................... 19 0 1 590.00 590 400 1 123 15 0 51 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTT......................................................................... 21 1 1 514.00 514 185 110 108 35 35 41 0
.....................................................................................................................................................TAGCACCATGAGATTCAGC........................................................................... 19 0 1 246.00 246 207 11 8 18 1 1 0
.....................................................................................................................................................TACCACCATGAGATTCAGCTC......................................................................... 21 1 1 243.00 243 43 187 4 0 7 2 0
.........................................................................ACTGAATTCTCGTGGGTT........................................................................................................................................................ 18 1 1 211.00 211 203 0 4 2 0 2 0
.........................................................................ACTGAATTCTCGTGGGTTT....................................................................................................................................................... 19 1 1 211.00 211 142 0 53 3 0 13 0
.....................................................................................................................................................TAGTACCATGAGATTCAGCTC......................................................................... 21 1 1 210.00 210 15 190 2 3 0 0 0
.....................................................................................................................................................TATCACCATGAGATTCAGCTC......................................................................... 21 1 1 182.00 182 157 5 12 0 6 2 0
.....................................................................................................................................................TAGCACCATTAGATTCAGCTC......................................................................... 21 1 1 181.00 181 170 0 1 2 7 1 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCC........................................................................ 22 1 1 173.00 173 49 71 6 12 32 3 0
.....................................................................................................................................................TAGCACCATGAGATTCATCTC......................................................................... 21 1 1 162.00 162 133 6 2 9 12 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTA......................................................................... 21 1 1 160.00 160 143 4 5 2 3 3 0
....................................................................................................................................................CTAGCACCATGAGATTCAGCTC......................................................................... 22 1 1 149.00 149 26 118 0 4 1 0 0
.....................................................................................................................................................TAGCACAATGAGATTCAGCTC......................................................................... 21 1 1 136.00 136 124 3 0 3 4 2 0
.....................................................................................................................................................TAGCACCATGAGATTAAGCTC......................................................................... 21 1 1 134.00 134 126 0 1 6 1 0 0
.....................................................................................................................................................TAGCACCATGATATTCAGCTC......................................................................... 21 1 1 121.00 121 107 1 1 1 9 2 0
.....................................................................................................................................................TGGCACCATGAGATTCAGCTC......................................................................... 21 1 1 117.00 117 8 103 3 1 2 0 0
.....................................................................................................................................................TAGAACCATGAGATTCAGCTC......................................................................... 21 1 1 106.00 106 95 0 1 4 3 3 0
.....................................................................................................................................................TAGCACCATGAGATTCAGATC......................................................................... 21 1 1 87.00 87 80 0 2 3 2 0 0
......................................................................................................................................................AGCACCATGAGATTCAGCTC......................................................................... 20 0 1 77.00 77 18 18 2 1 4 27 7
.........................................................................ACTGAATTCTCGTGGGTCTT...................................................................................................................................................... 20 1 1 71.00 71 54 0 11 2 0 4 0
.........................................................................ACTGAATTCTCGTGGGTCA....................................................................................................................................................... 19 1 1 65.00 65 19 0 32 2 0 12 0
.....................................................................................................................................................TAGCACCATGAGCTTCAGCTC......................................................................... 21 1 1 62.00 62 21 18 0 13 10 0 0
.....................................................................................................................................................TAGCACCATGCGATTCAGCTC......................................................................... 21 1 1 56.00 56 15 31 0 3 5 2 0
.....................................................................................................................................................TAGCAACATGAGATTCAGCTC......................................................................... 21 1 1 56.00 56 52 0 0 3 1 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCG........................................................................ 22 1 1 55.00 55 44 0 3 6 1 1 0
..........................................................................CTGAATTCTCGTGGGTCTGCA.................................................................................................................................................... 21 0 1 47.00 47 0 0 0 0 0 47 0
.....................................................................................................................................................TAACACCATGAGATTCAGCTC......................................................................... 21 1 1 45.00 45 29 2 1 3 9 1 0
.........................................................................ACTGAATTCTCGTTGGTC........................................................................................................................................................ 18 1 1 42.00 42 42 0 0 0 0 0 0
.....................................................................................................................................................GAGCACCATGAGATTCAGCTC......................................................................... 21 1 1 42.00 42 10 20 2 1 8 1 0
.....................................................................................................................................................TAGCACCATGAGATTCAG............................................................................ 18 0 1 39.00 39 34 0 1 3 1 0 0
.....................................................................................................................................................TAGCACCCTGAGATTCAGCTC......................................................................... 21 1 1 39.00 39 11 22 0 5 1 0 0
.....................................................................................................................................................TAGCACCACGAGATTCAGCTC......................................................................... 21 1 1 39.00 39 24 6 1 2 6 0 0
.....................................................................................................................................................TTGCACCATGAGATTCAGCTC......................................................................... 21 1 1 39.00 39 3 33 0 1 2 0 0
.........................................................................ACTGAATTCTCGTGGGTA........................................................................................................................................................ 18 1 1 37.00 37 31 0 3 0 0 3 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCCC......................................................................... 21 1 1 36.00 36 24 4 1 3 3 1 0
.....................................................................................................................................................TAGCACCATGAGATTTAGCTC......................................................................... 21 1 1 36.00 36 14 14 2 2 0 4 0
.....................................................................................................................................................CAGCACCATGAGATTCAGCTC......................................................................... 21 1 1 36.00 36 18 12 0 3 3 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGT..................................................................................................................................................... 21 1 1 35.00 35 18 0 11 5 0 1 0
.....................................................................................................................................................TAGCACCATGAGATTCACCTC......................................................................... 21 1 1 33.00 33 19 1 0 3 6 4 0
.....................................................................................................................................................TATCACCATGAGATTCAGCT.......................................................................... 20 1 1 33.00 33 30 0 3 0 0 0 0
.....................................................................................................................................................TAGCACTATGAGATTCAGCTC......................................................................... 21 1 1 32.00 32 20 4 0 5 3 0 0
.....................................................................................................................................................TAGCGCCATGAGATTCAGCTC......................................................................... 21 1 1 31.00 31 21 0 0 5 4 1 0
.....................................................................................................................................................TAGCACCATGGGATTCAGCTC......................................................................... 21 1 1 31.00 31 21 4 2 1 3 0 0
.........................................................................ACTGAATTCTCGTGGGTCG....................................................................................................................................................... 19 1 1 30.00 30 27 0 1 1 0 1 0
.................................................................................................................................................GATCTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 30.00 30 0 30 0 0 0 0 0
.....................................................................................................................................................TAGCATCATGAGATTCAGCTC......................................................................... 21 1 1 30.00 30 19 5 2 2 0 2 0
.....................................................................................................................................................TAGCACCATGAGGTTCAGCTC......................................................................... 21 1 1 29.00 29 20 0 3 5 1 0 0
.....................................................................................................................................................TAGCACCATTAGATTCAGCT.......................................................................... 20 1 1 29.00 29 29 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCGGCTC......................................................................... 21 1 1 29.00 29 20 3 2 1 2 1 0
.....................................................................................................................................................TAGCACCATGAGATTCCGCTC......................................................................... 21 1 1 28.00 28 18 0 0 2 8 0 0
.....................................................................................................................................................TAGCACAATGAGATTCAGCT.......................................................................... 20 1 1 26.00 26 25 0 0 1 0 0 0
.....................................................................................................................................................TAGCACCATAAGATTCAGCTC......................................................................... 21 1 1 26.00 26 15 5 1 3 1 1 0
.........................................................................ACTGAATTCTCGTGGGTCTGCAT................................................................................................................................................... 23 1 1 24.00 24 12 0 4 0 0 8 0
....................................................................................................................................................CGAGCACCATGAGATTCAGCTC......................................................................... 22 2 1 24.00 24 0 24 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGACATTCAGCTC......................................................................... 21 1 1 24.00 24 9 7 0 3 5 0 0
..........................................................................CTGAATTCTCGTGGGTCTG...................................................................................................................................................... 19 0 1 24.00 24 1 0 0 0 0 23 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTTT........................................................................ 22 1 1 23.00 23 8 3 6 3 1 2 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCC.......................................................................... 20 1 1 23.00 23 5 17 0 0 1 0 0
.........................................................................ACTGAATTCTCGTGTGTC........................................................................................................................................................ 18 1 1 22.00 22 21 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCGTGAGATTCAGCTC......................................................................... 21 1 1 21.00 21 10 1 0 6 4 0 0
.....................................................................................................................................................TAGCACCATGAGATTAAGCT.......................................................................... 20 1 1 19.00 19 19 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCTT....................................................................... 23 1 1 19.00 19 16 0 2 1 0 0 0
.........................................................................ACTGAATTCTCGTTGGTCTG...................................................................................................................................................... 20 1 1 18.00 18 18 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTTTT...................................................................................................................................................... 20 2 1 17.00 17 10 0 7 0 0 0 0
.....................................................................................................................................................TAGCACCATCAGATTCAGCTC......................................................................... 21 1 1 17.00 17 10 1 0 2 4 0 0
.....................................................................................................................................................TAGCACCATGAGATCCAGCTC......................................................................... 21 1 1 16.00 16 12 2 0 1 1 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAACTC......................................................................... 21 1 1 16.00 16 10 0 1 3 2 0 0
.........................................................................ACTGAATTCTCGTTGGTCTGC..................................................................................................................................................... 21 1 1 16.00 16 16 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGATATTCAGCT.......................................................................... 20 1 1 16.00 16 16 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGACTCAGCTC......................................................................... 21 1 1 15.00 15 11 1 0 1 2 0 0
.....................................................................................................................................................TAGAACCATGAGATTCAGCT.......................................................................... 20 1 1 15.00 15 14 0 1 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTG......................................................................... 21 1 1 15.00 15 6 1 1 2 3 2 0
..........................................................................CTGAATTCTCGTGGGTCTGC..................................................................................................................................................... 20 0 1 14.00 14 0 0 0 0 0 14 0
.........................................................................ACTGAATTCTCGTGGGTCTGCATTG................................................................................................................................................. 25 1 1 14.00 14 0 0 0 0 0 0 14
.....................................................................................................................................................AAGCACCATGAGATTCAGCTC......................................................................... 21 1 1 14.00 14 4 7 0 1 2 0 0
.........................................................................ACTGAATTCTCGTGGGTCTTC..................................................................................................................................................... 21 1 1 13.00 13 6 0 1 3 3 0 0
.........................................................................ACTGAATTCTCTTGGGTC........................................................................................................................................................ 18 1 1 13.00 13 13 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGTTC......................................................................... 21 1 1 13.00 13 8 4 0 0 1 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGAT.......................................................................... 20 1 1 13.00 13 13 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCATCT.......................................................................... 20 1 1 13.00 13 12 1 0 0 0 0 0
.....................................................................................................................................................TACTACCATGAGATTCAGCTC......................................................................... 21 2 1 12.00 12 0 12 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCTGCTC......................................................................... 21 1 1 12.00 12 5 1 0 3 3 0 0
.....................................................................................................................................................TAGCACCATGAGTTTCAGCTC......................................................................... 21 1 1 12.00 12 2 0 0 8 2 0 0
.....................................................................................................................................................TAGCACCATGAGATTCATCTCT........................................................................ 22 1 1 11.00 11 10 0 0 0 1 0 0
.........................................................................ACTGAATTCTAGTGGGTC........................................................................................................................................................ 18 1 1 11.00 11 11 0 0 0 0 0 0
.....................................................................................................................................................TAGCACGATGAGATTCAGCTC......................................................................... 21 1 1 11.00 11 2 7 1 0 1 0 0
.........................................................................ACTTAATTCTCGTGGGTC........................................................................................................................................................ 18 1 1 11.00 11 11 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATTAGATTCAGCTCT........................................................................ 22 1 1 11.00 11 10 0 0 0 1 0 0
.........................................................................ACTGAATTCTCGTGGGTCC....................................................................................................................................................... 19 1 1 11.00 11 8 0 0 2 0 1 0
.........................................................................ACTGAATTCTCGTGGGTCTGCACT.................................................................................................................................................. 24 0 1 11.00 11 0 0 0 0 0 11 0
.....................................................................................................................................................TACCACCATGAGATTCAGCTT......................................................................... 21 2 1 11.00 11 0 10 0 0 1 0 0
.....................................................................................................................................................TATCACCATGAGATTCAGCTCT........................................................................ 22 1 1 11.00 11 11 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTTGGTCTGCA.................................................................................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0 0
.........................................................................ACTGAATTATCGTGGGTC........................................................................................................................................................ 18 1 1 10.00 10 10 0 0 0 0 0 0
.....................................................................................................................................................TAGCAGCATGAGATTCAGCTC......................................................................... 21 1 1 10.00 10 2 7 0 1 0 0 0
.....................................................................................................................................................TAGGACCATGAGATTCAGCTC......................................................................... 21 1 1 10.00 10 10 0 0 0 0 0 0
.....................................................................................................................................................TCGCACCATGAGATTCAGCTC......................................................................... 21 1 1 10.00 10 8 0 1 1 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCT.................................................................................................................................................... 22 1 1 9.00 9 3 0 4 1 0 1 0
.........................................................................ACTGAATTCTAGTGGGTCTGC..................................................................................................................................................... 21 1 1 9.00 9 9 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCATCTCA........................................................................ 22 2 1 9.00 9 8 0 0 0 1 0 0
........................................................................................................................................................CACCATGAGATTCAGCTC......................................................................... 18 0 1 9.00 9 6 0 1 0 1 1 0
.....................................................................................................................................................TAGCTCCATGAGATTCAGCTC......................................................................... 21 1 1 9.00 9 1 7 1 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTAA........................................................................ 22 2 1 9.00 9 8 0 0 0 0 1 0
......................................................................................................................................................AGCACCATGAGATTCAGCT.......................................................................... 19 0 1 8.00 8 3 1 1 2 0 1 0
.........................................................................ACTGAATTCTCGTGGGTTA....................................................................................................................................................... 19 2 1 8.00 8 2 0 6 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTTA........................................................................ 22 2 1 8.00 8 3 0 3 2 0 0 0
.....................................................................................................................................................TAGTACCATGAGATTCAGCT.......................................................................... 20 1 1 8.00 8 2 4 1 0 1 0 0
.....................................................................................................................................................TAGCACCATGAGAATCAGCTC......................................................................... 21 1 1 8.00 8 2 2 0 3 1 0 0
.......................................................................................................................................................GCACCATGAGATTCAGCTC......................................................................... 19 0 1 8.00 8 6 0 0 0 1 1 0
.....................................................................................................................................................TAGCACCATGAAATTCAGCTC......................................................................... 21 1 1 8.00 8 6 0 0 2 0 0 0
.........................................................................ACTGAATTCTCGTGGTTCTGC..................................................................................................................................................... 21 1 1 8.00 8 6 0 1 1 0 0 0
.....................................................................................................................................................TAGTACCATGAGATTCAGCTT......................................................................... 21 2 1 8.00 8 0 8 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATACAGCTC......................................................................... 21 1 1 7.00 7 6 0 0 0 1 0 0
....................................................................................................................................................CTAGCACCATGAGATTCAGCT.......................................................................... 21 1 1 7.00 7 6 1 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTGAGCTC......................................................................... 21 1 1 7.00 7 6 0 1 0 0 0 0
.........................................................................ACTGAATTCTCGTTGGTCT....................................................................................................................................................... 19 1 1 7.00 7 7 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATTAGATTCAGCTCA........................................................................ 22 2 1 7.00 7 7 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGTGATTCAGCTC......................................................................... 21 1 1 7.00 7 1 1 1 3 1 0 0
.........................................................................ACTGAATTCTCTTGGGTCTGCA.................................................................................................................................................... 22 1 1 7.00 7 3 0 1 0 0 3 0
.....................................................................................................................................................TAGCACCATGATATTCAGCTCT........................................................................ 22 1 1 6.00 6 6 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGCGGGTC........................................................................................................................................................ 18 1 1 6.00 6 6 0 0 0 0 0 0
.....................................................................................................................................................TATCACCATGAGATTCAGCTCA........................................................................ 22 2 1 6.00 6 6 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGAGTCAGCTC......................................................................... 21 1 1 6.00 6 0 2 0 1 3 0 0
.........................................................................AATGAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTA...................................................................................................................................................... 20 1 1 6.00 6 3 0 1 1 0 1 0
.........................................................................ACTTAATTCTCGTGGGTCTGC..................................................................................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0 0
..................................................................................................................................................ATCTAGCACCATGAGATTCAGCTC......................................................................... 24 2 1 6.00 6 0 6 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCGGCT.......................................................................... 20 1 1 6.00 6 5 0 0 0 1 0 0
.........................................................................ACTGAATTCTCGTGGGTAT....................................................................................................................................................... 19 1 1 6.00 6 5 0 1 0 0 0 0
.....................................................................................................................................................TAGCACAATGAGATTCAGCTCT........................................................................ 22 1 1 6.00 6 6 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGGGATTCAGCT.......................................................................... 20 1 1 6.00 6 5 0 1 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGGTC......................................................................... 21 1 1 6.00 6 1 0 0 0 5 0 0
.........................................................................ACTGAATTCTAGTGGGTCTG...................................................................................................................................................... 20 1 1 6.00 6 5 0 0 0 0 1 0
.....................................................................................................................................................TAGCAACATGAGATTCAGCT.......................................................................... 20 1 1 6.00 6 5 0 0 1 0 0 0
.....................................................................................................................................................TATCACCATGAGATTCAGCTT......................................................................... 21 2 1 6.00 6 2 0 4 0 0 0 0
.........................................................................AATGAATTCTCGTGGGTC........................................................................................................................................................ 18 1 1 6.00 6 6 0 0 0 0 0 0
......................................................................................................................................................AGCACCATGAGATTCAGCTT......................................................................... 20 1 1 6.00 6 2 2 0 0 0 2 0
.........................................................................ACTTAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0
......................................................................................................................................................AGCACCATGAGATTCAGCTCT........................................................................ 21 0 1 5.00 5 3 0 0 0 0 2 0
.........................................................................ACTGAATTCTCGTGGGTCTGCAA................................................................................................................................................... 23 1 1 5.00 5 1 0 1 1 0 1 1
.........................................................................ACTGAATTCTAGTGGGTCTGCA.................................................................................................................................................... 22 1 1 5.00 5 4 0 0 0 0 1 0
.........................................................................ACTGAATTCTCTTGGGTCTG...................................................................................................................................................... 20 1 1 5.00 5 3 0 0 0 0 2 0
.....................................................................................................................................................TAGCACCAAGAGATTCAGCTC......................................................................... 21 1 1 5.00 5 5 0 0 0 0 0 0
.....................................................................TGGAACTGAATTCTCGTGGGTCT....................................................................................................................................................... 23 0 1 5.00 5 2 2 1 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGCC........................................................................................................................................................ 18 1 1 5.00 5 4 0 0 1 0 0 0
...................................................................................................................................................TCTAGCACCATGAGATTCAGCTC......................................................................... 23 1 1 5.00 5 1 4 0 0 0 0 0
.....................................................................................................................................................TAGAACCATGAGATTCAGCTCT........................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTAAGCTA......................................................................... 21 2 1 5.00 5 5 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCGC......................................................................... 21 1 1 5.00 5 0 1 0 3 1 0 0
.....................................................................................................................................................TAGCACCATGATATTCAGCTCA........................................................................ 22 2 1 5.00 5 5 0 0 0 0 0 0
.....................................................................................................................................................TACCACCATGAGATTCAGCT.......................................................................... 20 1 1 5.00 5 2 2 1 0 0 0 0
.........................................................................ACTGAATTCTCTTGGGTCT....................................................................................................................................................... 19 1 1 5.00 5 4 0 0 0 1 0 0
.........................................................................ACTGAATTCTCGTGGGTGT....................................................................................................................................................... 19 1 1 5.00 5 4 0 1 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGCCTGC..................................................................................................................................................... 21 1 1 5.00 5 4 0 0 1 0 0 0
........................................................................CACTGAATTCTCGTGGGTC........................................................................................................................................................ 19 1 1 5.00 5 5 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGACTCAGCT.......................................................................... 20 1 1 5.00 5 4 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCATGAGATTAAGCTCT........................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGTGTCT....................................................................................................................................................... 19 1 1 5.00 5 5 0 0 0 0 0 0
....................................................................................................................................................CTAGCACCATGAGATTCAGCTT......................................................................... 22 2 1 5.00 5 1 4 0 0 0 0 0
.....................................................................................................................................................TAGCCCCATGAGATTCAGCTC......................................................................... 21 1 1 5.00 5 3 0 1 0 1 0 0
.........................................................................ACTGAATTCTCGTGGGTTG....................................................................................................................................................... 19 2 2 5.00 10 7 0 0 1 0 2 0
.........................................................................ACTGAATTCTCGTGGGTATGCA.................................................................................................................................................... 22 1 1 5.00 5 4 0 0 0 0 1 0
.....................................................................................................................................................TAGCGCCATGAGATTCAGCT.......................................................................... 20 1 1 5.00 5 4 0 0 1 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTAT........................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTATGC..................................................................................................................................................... 21 1 1 5.00 5 4 0 0 0 0 1 0
.........................................................................ACTGAATTCTCGTGGGTAA....................................................................................................................................................... 19 2 2 4.50 9 0 0 5 0 0 4 0
......................................................................................................................................................ATCACCATGAGATTCAGCTC......................................................................... 20 1 2 4.50 9 1 8 0 0 0 0 0
.........................................................................ACTGAATCCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 4.00 4 1 0 1 1 0 1 0
.....................................................................................................................................................TAGCACCATGCGATTCAGCT.......................................................................... 20 1 1 4.00 4 2 1 0 1 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGA..................................................................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCCGCT.......................................................................... 20 1 1 4.00 4 2 0 0 1 1 0 0
.........................................................................ACTGAATTCTCCTGGGTC........................................................................................................................................................ 18 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................ACTGAATTATCGTGGGTCTGC..................................................................................................................................................... 21 1 1 4.00 4 2 0 1 0 0 1 0
.....................................................................................................................................................TAGCACCATGAGATTCAGT........................................................................... 19 1 1 4.00 4 3 0 1 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCAC................................................................................................................................................... 23 0 1 4.00 4 1 0 0 0 0 2 1
.....................................................................................................................................................TAGCACCATGAGGTTCAGCT.......................................................................... 20 1 1 4.00 4 2 0 0 1 0 1 0
.....................................................................................................................................................TAGCACCCTGCGATTCAGCTC......................................................................... 21 2 1 4.00 4 1 3 0 0 0 0 0
.........................................................................ACTGAATTCTCGGGGGTC........................................................................................................................................................ 18 1 1 4.00 4 3 0 1 0 0 0 0
.........................................................................ACTTAATTCTCGTGGGTCT....................................................................................................................................................... 19 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGTTC........................................................................................................................................................ 18 1 1 4.00 4 4 0 0 0 0 0 0
......................................................................................................................................................AGCACCATGAGATTCAGCTCA........................................................................ 21 1 1 4.00 4 2 0 0 1 1 0 0
.....................................................................................................................................................TGGCACCATGAGATTCAGCTCC........................................................................ 22 2 1 4.00 4 0 4 0 0 0 0 0
......................................................................................................................................................TGCACCATGAGATTCAGCTC......................................................................... 20 1 1 4.00 4 2 1 1 0 0 0 0
....................................................................................................................................................ATAGCACCATGAGATTCAGCTC......................................................................... 22 1 1 4.00 4 2 1 0 0 1 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCAA....................................................................... 23 2 1 4.00 4 0 0 0 0 0 4 0
.....................................................................................................................................................TACCACCATGAGCTTCAGCTC......................................................................... 21 2 1 4.00 4 0 4 0 0 0 0 0
.....................................................................................................................................................TAGCCCCATGAGATTCAGCT.......................................................................... 20 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGCGGGTCTGCA.................................................................................................................................................... 22 1 1 4.00 4 1 0 0 1 1 1 0
.....................................................................................................................................................TATCACCATGAGATTCAGC........................................................................... 19 1 1 4.00 4 4 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCCTC........................................................................... 19 2 1 4.00 4 3 0 1 0 0 0 0
.........................................................................ACTGAATCCTCGTGGGTC........................................................................................................................................................ 18 1 1 4.00 4 4 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCAGGAGATTCAGCTC......................................................................... 21 1 1 4.00 4 3 0 0 0 1 0 0
.........................................................................ACTGCATTCTCGTGGGTC........................................................................................................................................................ 18 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGTGTCTGC..................................................................................................................................................... 21 1 1 4.00 4 3 0 0 1 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTTT..................................................................................................................................................... 21 2 1 4.00 4 2 0 0 0 0 2 0
.........................................................................ACTGAATTCTCGTGGGTATG...................................................................................................................................................... 20 1 1 4.00 4 3 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCATGAGTTTCAGCT.......................................................................... 20 1 1 4.00 4 1 1 0 2 0 0 0
.....................................................................................................................................................TAGCACCTTGAGATTCAGCTC......................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
.....................................................................................................................................................TGGCACCATGAGATTCAGCTCT........................................................................ 22 1 1 4.00 4 1 1 2 0 0 0 0
.....................................................................................................................................................TAGCACCACGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 2 0 0 1 0 0 0
.....................................................................................................................................................TAGCACCATGAGCTTCAGCT.......................................................................... 20 1 2 3.00 6 3 0 0 2 1 0 0
.........................................................................ACTGAATTATCGTGGGTCTG...................................................................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAAATTCAGCT.......................................................................... 20 1 1 3.00 3 2 0 0 0 1 0 0
.....................................................................................................................................................TGGTACCATGAGATTCAGCTC......................................................................... 21 2 1 3.00 3 0 3 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTTAGCT.......................................................................... 20 1 1 3.00 3 1 0 1 1 0 0 0
.........................................................................ACTGCATTCTCGTGGGTCTG...................................................................................................................................................... 20 1 1 3.00 3 1 0 0 1 0 1 0
.........................................................................ACTGAATTCCCGTGGGTC........................................................................................................................................................ 18 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TCGCACCATGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCTG....................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................................................................TACACCATGAGATTCAGCTC......................................................................... 20 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................ACTGAATTCTCTTGGGTCTGC..................................................................................................................................................... 21 1 1 3.00 3 1 0 0 0 1 1 0
.....................................................................................................................................................TAGCACCATGACATTCAGCTCT........................................................................ 22 1 1 3.00 3 1 1 0 0 1 0 0
.........................................................................ACTAAATTCTCGTGGGTC........................................................................................................................................................ 18 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCGCCATGAGATTCAGCTCA........................................................................ 22 2 1 3.00 3 2 0 0 0 1 0 0
.....................................................................................................................................................TAGCACCATGATATTCATCTC......................................................................... 21 2 1 3.00 3 2 0 0 0 1 0 0
.....................................................................................................................................................TAACACCATGAGATTCAGCTCT........................................................................ 22 1 1 3.00 3 2 0 0 0 1 0 0
.....................................................................................................................................................TGGCACCATGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................ACTAAATTCTCGTGGGTCTGC..................................................................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGACATTCAGCT.......................................................................... 20 1 1 3.00 3 1 0 1 0 1 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGCACTG................................................................................................................................................. 25 0 1 3.00 3 0 0 0 0 0 3 0
.....................................................................................................................................................TAGCACCATGAGATTCAGATCT........................................................................ 22 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................ACTCAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 3.00 3 0 0 1 0 0 2 0
.....................................................................................................................................................TAGCATCATGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCTA....................................................................... 23 1 1 3.00 3 1 0 1 1 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCTTCTC......................................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCACAATGAGATTCAGC........................................................................... 19 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................ACCGAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0 0
.........................................................................ACTTAATTCTCGTGGGTCTG...................................................................................................................................................... 20 1 1 3.00 3 2 0 1 0 0 0 0
.........................................................................ACTGCATTCTCGTGGGTCTGC..................................................................................................................................................... 21 1 1 3.00 3 1 0 0 2 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTGTA.................................................................................................................................................... 22 1 1 3.00 3 0 2 1 0 0 0 0
.........................................................................TCTGAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 3.00 3 0 0 0 0 0 3 0
.....................................................................................................................................................TAGCACCACGAGATTCAGCTCA........................................................................ 22 2 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TACCACCATGAGATTCAGCTCT........................................................................ 22 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGTACCATGAGATTTAGCTC......................................................................... 21 2 1 3.00 3 0 3 0 0 0 0 0
.....................................................................................................................................................TACCACCATGAGATTCAGCTCA........................................................................ 22 2 1 3.00 3 3 0 0 0 0 0 0
................................................................................................................................................TTCTGTAGCACCATGAGATTCAGCT.......................................................................... 25 0 1 3.00 3 0 0 0 0 0 0 3
.........................................................................ACTGAATTCTCGTGGGTCTGG..................................................................................................................................................... 21 1 1 3.00 3 0 0 0 0 0 3 0
.........................................................................ACTGAATTCTCGTGAGTCTGC..................................................................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCACCT.......................................................................... 20 1 1 3.00 3 0 0 0 0 3 0 0
.....................................................................................................................................................TAGCACAATGAGATTAAGCTC......................................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCAGCATGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 2 0 0 1 0 0 0
.........................................................................ACTGAATTCTTGTGGGTC........................................................................................................................................................ 18 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAACACCATGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGAACAATGAGATTCAGCTC......................................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAACT.......................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCTTCA.................................................................................................................................................... 22 1 1 3.00 3 1 0 0 0 1 1 0
.........................................................................ATTGAATTCTCGTGGGTC........................................................................................................................................................ 18 1 1 3.00 3 2 0 0 0 0 1 0
.....................................................................................................................................................TAGTACCCTGAGATTCAGCTC......................................................................... 21 2 1 3.00 3 0 3 0 0 0 0 0
.....................................................................................................................................................TAGCACCCTGAGATTCAGCT.......................................................................... 20 1 1 3.00 3 0 3 0 0 0 0 0
.........................................................................ACTGAATCCTCGTGGGTCTG...................................................................................................................................................... 20 1 1 3.00 3 0 0 2 0 0 1 0
.........................................................................ACTGAATTCTCGTGTGTCTG...................................................................................................................................................... 20 1 1 3.00 3 2 0 1 0 0 0 0
.....................................................................................................................................................TAGCACCATGATATTCAGCTCC........................................................................ 22 2 1 2.00 2 0 0 0 0 2 0 0
.........................................................................ACTAAATTCTCGTGGGTCTG...................................................................................................................................................... 20 1 1 2.00 2 1 0 0 0 0 1 0
.....................................................................................................................................................TAGCACAATGAGATTCAGCTCG........................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................CATCTAGCACCATGAGATTCAGCTC......................................................................... 25 3 1 2.00 2 0 2 0 0 0 0 0
.........................................................................ACTGAATTCTCGTTGGTCTGCAT................................................................................................................................................... 23 2 1 2.00 2 1 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCATGAGATGCAGCGC......................................................................... 21 2 1 2.00 2 0 0 0 0 2 0 0
.........................................................................ACCGAATTCTCGTGGGTCTGC..................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAAATTCAGCTCT........................................................................ 22 1 1 2.00 2 1 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCAC......................................................................... 21 1 1 2.00 2 0 0 1 1 0 0 0
.....................................................................................................................................................TAGCACCGTGAGATTCAGCT.......................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
....................................................................................................................................................TTAGCACCATGAGATTCAGCTC......................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCCTGAGATTCACCTC......................................................................... 21 2 1 2.00 2 0 1 0 0 1 0 0
.........................................................................ACTGATTTCTCGTGGGTCTG...................................................................................................................................................... 20 1 1 2.00 2 0 0 0 0 0 2 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCCT......................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................................................................ATCAGCACCATGAGATTCAGCTC......................................................................... 23 3 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................................................................................TACCACCATGACATTCAGCTC......................................................................... 21 2 1 2.00 2 0 0 0 0 2 0 0
.....................................................................................................................................................TAGCACCATTAGATTCATCTC......................................................................... 21 2 2 2.00 4 4 0 0 0 0 0 0
.........................................................................AATGAATTCTCGTGGGTCTGC..................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCACCTCT........................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCCGCTT......................................................................... 21 2 1 2.00 2 0 0 0 1 1 0 0
................................................................................................................................................CTATCTAGCACCATGAGATTCAGCTC......................................................................... 26 3 1 2.00 2 0 2 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGTTCT....................................................................................................................................................... 19 1 1 2.00 2 1 0 1 0 0 0 0
.........................................................................ACTGAATTCTCGTGGTTCTGCA.................................................................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA...................................................................... 24 3 1 2.00 2 0 0 0 0 0 2 0
.........................................................................ACAGAATTCTCGTGGGTC........................................................................................................................................................ 18 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGCGCCATGAGATTCAGCTCT........................................................................ 22 1 1 2.00 2 1 0 0 0 1 0 0
.........................................................................ACTGAATTCTCGTGGGGCTGC..................................................................................................................................................... 21 1 1 2.00 2 0 0 0 0 0 2 0
.........................................................................AGTGAATTCTCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0
.........................................................................ACTGAATTCCCGTGGGTCTGCA.................................................................................................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0
.....................................................................................................................................................TAGCACCATGCGATTCAGCTCA........................................................................ 22 2 1 2.00 2 1 0 0 1 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGCTTG........................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGCCCCATGAGTTTCAGCTC......................................................................... 21 2 1 2.00 2 0 0 0 2 0 0 0
.........................................................................ACTGAATTCTCGTGAGTC........................................................................................................................................................ 18 1 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................................................................AACACCATGAGATTCAGCTC......................................................................... 20 1 1 2.00 2 0 1 0 1 0 0 0
....................................................................................................................................................CTAGCACCATGAGATTCAGCTCT........................................................................ 23 1 1 2.00 2 1 1 0 0 0 0 0
.....................................................................................................................................................TAGTACCATGAGATTCAGCTCC........................................................................ 22 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................ACTGAATTCTCGTGGGTCCGC..................................................................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAACTCA........................................................................ 22 2 1 2.00 2 1 0 1 0 0 0 0
.....................................................................................................................................................TAGCACCATTAGATTCAGCTT......................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGCACCATGAGATTCAGATCA........................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................TAGGACCATGAGATTCAGCTCT........................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0

Anti-sense strand reads

ATATATACATATATATAGCTGTATTTTGGGCGGCGGAGCAGTCGTTAGCAGGAGCACAGTTTAAGTAAAACCTTGACTTAAGAGCACCCAGACGTGACTGTTGTGACTGGCGAGGTCCCGGTTAACAAGTAAAACTTTAACTTTAAGACATCGTGGTACTCTAAGTCGAGACCGCACTTAAAGTTTGTACGTAGGTGTTGTAGAGAGCGAGATAGTCGAGAGAGGAAAAGATACCGACAGGTC

**********************************************************.((..((((.(((((.(((((.((((((((..(((((..(((((......((......)).....)))))...................)))))..))))))))))))).))))).))))..))...********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body
................................................................................................................................................................................................AGGTGTTGGAGAGAGTGTGA............................... 20 3 12 0.08 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4770:4217671-4217913 + der_240 confident TAT-AT-AT--------------GTATATATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TC----------TCCTTTTCTATGGCTGT-----CCA--------G
droYak3 3R:6285111-6285356 - dya_162 confident TAT-AT-AT--------------GTAT--ATATCG-ACA-----ACAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATATCTCGC-TCTAT-CAG-------------------CTC-------TC----------TCCTTTTCTATGGCTGTACTGTACA--------G
droSec2 scaffold_6:4044342-4044586 + dse_356 confident TAT-AT-AT--------------GTAT--ATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCTC------TCCTTTTCTATGGTTGT-----CCA--------G
droSim2 3r:3865002-3865246 + dsi_272 confident TAT-AT-AT--------------GTAT--ATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCTC------TCCTTTTCTATGGTTGT-----CCA--------G
dm3 chr3R:17447532-17447793 - dme-mir-998 Known_mirbase TAT-AT-AT--------------GTATATATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCAAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG----CTCTC-------------AGCTCTCTCTCTCTCTCTCTCCTATTTTATGGTTGT-----CCA--------G
droEug1 scf7180000409760:941949-942199 + TAT-AT-AT--------------ATATCGATAGCG-ATATCG---ATAACCT----GTCGCCA----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCCGG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCACC-----AACATCTCTCGC-TCTATTCAG-------------------CTC-------TCTATC----------TCTCTATGTTTGT-----CCA--------A
droBia1 scf7180000302402:5912446-5912693 - TAA-AT-AT------------C------TGTATCG-ACA-----TATAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTGTCTCCCTGTCCTCCCCTATGTTTGT-----CCA---------
droTak1 scf7180000415711:238655-238895 + TAT-AT-A--------------------TATATCG-ACA-----TATAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTGT-CAG-------------------CTC-------TCTCT-----------CCTCAATGTTTGT-----CCACGGCA---A
droEle1 scf7180000491104:156523-156778 - TAT-AT-AC------------TTGTATAAACATCG-ACA-----TATTACCC----GTCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCT-------TCCTCTTCTATGTTTGT-----CCACGGCAAAAA
droRho1 scf7180000762316:6941-7186 - CAT-AA-AT--------------GTATATATATCG-ACA-----TACAACCC----GTCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCT-------TCCTCCTCTATGTTTGT-----TCA--------C
droFic1 scf7180000454096:748425-748673 - TAT-AT-A--------------------TATATCG-ACA-----TATAACCC----GACGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTCAGC----TCTCTA------TCCTCCTCTATGTTTGT-----CCACGGCC---A
droKik1 scf7180000302706:728170-728435 + TGT-AT-ATA-TATATATATTA------TGTATCG-ACA-----T--AACCC----GACGCCT----------------------------------------------------------------------------------------------CGTCAGCAAATTCGTTCGTC--CTCTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT------------------TCCGG--GGGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACCAAAACAACATCTCTCGC-TCTATTCAG----CTCTC---------------------CTCTA------TTCTCTACTCT----------------------G
droAna3 scaffold_13340:5676129-5676420 + dan_323 confident TATTATAATACTATATAT---ATGTATATATATCGGACA-----TATAACCCCGACGACGCCT----------------------------------------------------------------------------------------------CGTCAGCAATC----TCGTCTCCTCTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC-AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCACCAAA--AACATCTCTCGC-TC------G-------------------CTC-------TCGCTC------TC--GCTCTATCTTT-T-----CCTTGGAA---C
droBip1 scf7180000396708:3137624-3137877 - TGT-AT-GT--------------ATATATATATCG-ACA-----TATAACCC----GACGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TC------G----CTCTCGCTCTATCAAATC-------TCTAT----GTCTCCTACTCTAT-----------------------
dp5 2:23856792-23857051 - dps_248 confident TGT-AT-AT------------A------TGTATCG-TT---GAAAAAATCCC----GACGCCT----------------------------------------------------------------------------------------------CGTCTGAAATATATATCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCCAG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGCCTCGCCTCGCCTCGC-CTCGCTATATCTACTC-------TATCTC------TC------------TGT-----CTA--------T
droPer2 scaffold_3:6633357-6633616 - dpe_341 confident TGT-AT-AT------------A------TGTATCG-TT---GAAAAAATCCC----GACGCCT----------------------------------------------------------------------------------------------CGTCTGAAATATATATCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCCAG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGCCTCGCCTCGCCTCGC-CTCGCTATATCTACTC-------TATCTC------TC------------TGT-----CTA--------T
droWil2 scf2_1100000004902:8480191-8480341 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT-GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAT------CACA---------------------------------------------------------------------------------------------
droVir3 scaffold_13047:6339479-6339740 + dvi-mir-998 Known_mirbase TAT-AT-AG------------A-GAAT--GTACAG-ATA-----T-CAACCC----GCCGCCTTTATGTCGATGTTTTTTCGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAAATGGAAACCATT-----------TGCTCGCAA--CG--CGCAA------GCG-------------CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC-------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:1739254-1739390 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCA-AACATGCATTCAC-------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:11660042-11660290 + dgr_78 confident TAC-AC-AC--------------ACATAAGT--CA-TC---GAAT-TAACCC----GCCGCCTTTATGTTGCTC-----------------------------------------------AAATGGG-ACCATTCTGTATATCAATCCAATCAACGC----GCAA------GCG-------------CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------CAAATCA----------------------------AATCAAATC-------A--------------------------AT-----CAA--------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TAT-AT-AT--------------GTATATATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TC----------TCCTTTTCTATGGCTGT-----CCA--------GSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21129289.00292894294518225916521965184642
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2013562.003562346626210236027380
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................1811892.0018926243206317310
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2211355.001355282587554511150
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2111080.00108013678362605880
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2211032.0010324324032131723430
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201798.0079823013912183090
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221705.007056156130365570
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191590.005905111501234000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211514.005144111035351081850
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191246.0024611118182070
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................181211.00211202042030
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................221173.0017337112326490
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................211160.00160342351430
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20177.00772718142187
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20171.0071402011540
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................19165.00651202032190
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22155.005510613440
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21147.004747000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18139.003900311340
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTA..................................................................................................................................................................................................................................................18137.003730003310
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21135.0035105011180
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................19130.003010101270
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................23124.002480004120
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................19124.002423000010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................20123.002301701050
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23119.001900102160
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21115.00152123160
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20114.001414000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................19111.00111020080
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT...........................................................................................................................................................................................................................................24111.001111000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................2219.0091010430
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1819.0091001160
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................2219.0091000080
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1918.0081120130
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTA.................................................................................................................................................................................................................................................1918.0080000620
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................2218.0080020330
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1918.0081001060
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTA................................................................................................................................................................................................................................................2016.0061010130
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................2016.0062200020
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2115.0052000030
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................2315.0051010111
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................2315.0050200120
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTG.................................................................................................................................................................................................................................................1925.00102010070
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTAA.................................................................................................................................................................................................................................................1924.5094000500
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................2114.0040000040
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT.....................................................................................................................................1914.0040000130
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................2314.0042000011
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCA..................................................................................................................................2114.0040011020
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................2314.0044000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTT...............................................................................................................................................................................................................................................2114.0042000020
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG.................................................................................................................................2313.0030000030
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG..........................................................................................................................................................................................................................................2513.0033000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................2313.0030010110
..................................................................................................................................................................................................................................................................................................................TTCTGTAGCACCATGAGATTCAGCT....................................................................................................................................2513.0030000003
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................2113.0033000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................2112.0020000020
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA................................................................................................................................2412.0022000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG..................................................................................................................................2212.0020000020
droYak3
TAT-AT-AT--------------GTAT--ATATCG-ACA-----ACAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATATCTCGC-TCTAT-CAG-------------------CTC-------TC----------TCCTTTTCTATGGCTGTACTGTACA--------GSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21151911.00519115284337031332032326598800001322
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2214767.0047673226625787341349330000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................2112342.002342185191693621116100112
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2012152.00215241056441633806771770020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................1811326.0013269421114010825100000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2211231.001231488491203135277330000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................211949.009491731402943064184640000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191766.007666632161294410010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221475.004750181127270163400000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................221310.003100325615112320000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................201221.00221010111402400000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................201197.001970019500200000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191168.00168031283121910020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201151.00151116221634330020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.............................................................................................................................................................................................................................................221140.001401371100100000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................191126.001261191101400000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................211113.001130104914112530001
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................18150.00501030063100000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21150.0050149000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23133.0033045341610000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21129.0029002023400000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................22127.0027192401100000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................19125.0025129000400000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................23125.0025182100130000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................19124.0024230001000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................23116.001663700000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22116.001602005900000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................23114.0014001110200000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18113.001300040810000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20111.001111103410000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................20111.001105600000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................22111.001130401300000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................22110.001004201030000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................2319.00902012310000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................2118.00830012200000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2118.00807100000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC..................................................................................................................................2218.00801600100000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2018.00808000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................2118.00802002310000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................2317.00702500000000
..........................................................................................................................................................................................................................................................................................................AATTGAAATTCTGTAGCACCATGAGA...........................................................................................................................................2617.00700000000007
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTA..................................................................................................................................................................................................................................................1817.00710004200000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................2017.00700410200000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1917.00706100000000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1916.00606000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C.....................................................................................................................................................................................................................................2716.00603200010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT...........................................................................................................................................................................................................................................2416.00604200000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................2116.00600321000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTA.................................................................................................................................................................................................................................................1915.00511000210000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---......................................................................................................................................................................................................................................2615.00503200000000
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1815.00500301010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGT...................................................................................................................................................................................................................................................1714.00400000400000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................2314.00400400000000
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................1914.00440000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-A............................................................................................................................................................................................................................................2314.00440000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG....................................................................................................................................2014.00400010300000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1914.00401101100000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTC.................................................................................................................................................................................................................................................1913.00310000200000
droSec2
TAT-AT-AT--------------GTAT--ATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCTC------TCCTTTTCTATGGTTGT-----CCA--------GSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21124777.002477727914601175611282
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2012648.002648302806701668
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2211440.001440501161225553
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2211123.0011231430131948
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2111012.001012146201101564
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221426.00426014152260
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201234.0023450432139
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211214.00214104011252
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................181183.00183102180
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................221108.00108166932
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................19192.009253282
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................21182.0082254233
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................19174.0074221654
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................23156.0056137432
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20144.004430185
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21143.004342010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18142.0042021426
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................18140.004000040
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21139.003909030
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23132.003200329
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20117.001710016
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22117.001700017
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................22116.00165218
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................21116.00164606
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20112.001212000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................23110.00103007
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1919.0099000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................2318.0080233
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................1918.0084004
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1917.0070061
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................2317.0075011
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA.................................................................................................................................2316.0060060
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT................................................................................................................................2415.0050005
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2015.0053020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTA..................................................................................................................................................................................................................................................1815.0051004
......................................................................................................................................................................................TCGTGTCAAATTCATTTTGGA....................................................................................................................................................................................................................................................................2114.0041021
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................2114.0041021
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2114.0041003
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGA.....................................................................................................................................1914.0040112
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1814.0040031
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................2214.0041300
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................2213.0030030
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT.................................................................................................................................2313.0030120
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTC.................................................................................................................................2313.0030003
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................2213.0033000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................2013.0030003
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAT.................................................................................................................................2313.0031002
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1913.0031011
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T............................................................................................................................................................................................................................................2312.0020101
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-T............................................................................................................................................................................................................................................2312.0021100
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTCT................................................................................................................................2412.0020002
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................2012.0020002
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................2112.0021001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT.....................................................................................................................................1912.0020011
........................................................................................................................................................................................GTGTCAAATTCATTTTGGA....................................................................................................................................................................................................................................................................1912.0020020
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................2012.0022000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTC.................................................................................................................................................................................................................................................1912.0020002
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................2312.0021010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTACA.................................................................................................................................2311.0010001
............................................................................................................................................................................................................................................................................................................................................TGGCGTGAATTTCA-AACATG..............................................................................................................2011.0010010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................1911.0010001
..................................................................................................................................................................................................................................................................................................................TTCTGTAGCACCATGAGATTCT.......................................................................................................................................2211.0011000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTTT...............................................................................................................................2511.0010001
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1911.0010010
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1811.0011000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGAT-.............................................................................................................................................................................................................................................2211.0010001
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---...........................................................................................................................................................................................2211.0010001
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................1911.0010001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................2111.0010010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTGA.................................................................................................................................................................................................................................................1911.0010001
..........................................................................................................................................................................................................................................................................................T--TGTTCAT-TTTGAAATTGAAATTCTG........................................................................................................................................................2611.0010001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG.................................................................................................................................2311.0010001
droSim2
TAT-AT-AT--------------GTAT--ATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCTC------TCCTTTTCTATGGTTGT-----CCA--------GSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................22133537.0033537122151635452310034105288153215263488272383110626931
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21124155.00241552231413637163840211118071160826126413876155165001
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................2016938.0069381071611333119181424262801566383000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2016333.00633315002294113651244112268915142511645000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2115558.00555812471101911945212235125697610206352031623000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................2313316.0033161021283000001603032880001
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................1912250.0022501471902101224159251131298000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................1811528.0015281002751751032702048413007000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................1911415.0014154001182858313020162601102000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................2111056.001056221000010902071014000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.............................................................................................................................................................................................................................................221869.0086949411525100001000017000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................211831.0083100420043282792501892736000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................221597.0059723118400000122147291000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221577.0057710210010379122568811456000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................231465.0046545412084297010000715000
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCTC...................................................................................................................................171399.003990000000001398000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................181370.0037000003921510612978100000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211329.00329201200169244116117947000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................231297.002971022000214104057205000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................221247.00247600252024295838781220000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-.............................................................................................................................................................................................................................................221227.002270000000000001226000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................191200.0020018512300000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................221111.001111001001491410451700000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA...........................................................................................................................................................................................................................................241107.0010713410000010001078000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................21192.00921300000000010276000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T............................................................................................................................................................................................................................................23175.00751410000000000159000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................23171.007100020044143313100000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................19170.0070646000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................23159.00590001002322229000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20157.0057410000000000052000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTT...............................................................................................................................................................................................................................................21156.0056100000000000055000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................21150.0050374800000000001000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGT...................................................................................................................................................................................................................................................17150.0050000000840335000000
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCT....................................................................................................................................16146.0046000000000046000000
............................................................................................................................................................................................................................................................................................................................CCATGAGATTCAGCTC...................................................................................................................................16146.0046000000000046000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA.................................................................................................................................23145.00450001002121173000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA................................................................................................................................24139.00390000001117144011000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................23137.00370000001361320120000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20135.0035000204020124200000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................22135.0035291200000020010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGG....................................................................................................................................................................................................................................................16134.00340000001242211003000
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................18133.0033617000000019000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTC........................................................................................................................................16132.0032000000000032000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................18132.0032282000000002000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTTT-.............................................................................................................................................................................................................................................22131.0031000000000000031000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT...........................................................................................................................................................................................................................................24127.002720310356410011000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATT.........................................................................................................................................15126.0026000000001025000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................22125.002500000020597011000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-T............................................................................................................................................................................................................................................23125.0025000000000000025000
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................19124.0024115100000007000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................20124.002400000007952001000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCA.......................................................................................................................................17121.0021000000012018000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAAA...............................................................................................................................25121.0021000000221070000000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21121.002161490000001000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21119.001900000031318300000
...........................................................................................................................................................................................................ACTGAATTCTCGTGG.....................................................................................................................................................................................................................................................15118.0018000000110016000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA.................................................................................................................................23118.001800000001861110000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................19117.0017000100000210400000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C.....................................................................................................................................................................................................................................27116.001600000077200000000
.............................................................................................................................................................................................................................................................................................................................CATGAGATTCAGCTC...................................................................................................................................15116.0016000000000016000000
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGC........................................................................................................................................................................................25114.001440100017100000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---......................................................................................................................................................................................................................................26114.001400320033201000000
................................................................................................................................................................................................................ATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................17113.0013000000000013000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-A............................................................................................................................................................................................................................................23112.001261000000000032000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22111.001100000022007000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTA................................................................................................................................................................................................................................................20111.001121010000001006000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-AA...........................................................................................................................................................................................................................................24111.001100000000221024000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................20110.001040000000006000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAA................................................................................................................................2419.00900000041310000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA...................................................................................................................................2119.00900000010421010000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1918.00800011000006000000
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCA......................................................................................................................................................................................2718.00820000023010000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTA...............................................................................................................................................................................................................................................2118.00800000000000008000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TC...........................................................................................................................................................................................................................................2417.00720000000000005000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................2217.00700000011220010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTC.................................................................................................................................................................................................................................................1917.00770000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................2317.00700010000001005000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G............................................................................................................................................................................................................................................2316.00632000000000001000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG....................................................................................................................................2016.00600000000005100000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCAA................................................................................................................................2416.00600000000510000000
...............................................................................................................................................................................................................AATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................1816.00650100000000000000
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCTA...................................................................................................................................1716.00600000000006000000
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCTT...................................................................................................................................1716.00600000000006000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-AAA..........................................................................................................................................................................................................................................2515.00510000000310000000
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1815.00500000100013000000
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GG.........................................................................................................................................................................................2415.00500000021101000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT................................................................................................................................2415.00500000030001001000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGTC-.............................................................................................................................................................................................................................................2215.00500000000000005000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGT...................................................................................................................................................................................................................................................2115.00500000021200000000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2115.00500000000004100000
................................................................................................................................................................................................................ATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1615.00500000000005000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTAT...............................................................................................................................................................................................................................................2115.00510000000000004000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGAT-.............................................................................................................................................................................................................................................2215.00500000000000005000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGC.....................................................................................................................................1815.00500000400001000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---CAA...................................................................................................................................................................................................................................2915.00500000013100000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................2215.00500000011120000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGA...................................................................................................................................2114.00400000000101200000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TG...........................................................................................................................................................................................................................................2414.00420000000000002000
................................................................................................................................................................................................................................................................................................................AATTCTGTAGCACCATGAGATT.........................................................................................................................................2214.00400100010110000000
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCTCT..................................................................................................................................1814.00400000000004000000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2014.00410030000000000000
.......................................................................................................................................................................................................................................................................................................TGAAATTGAAATTCTGTAGCACCATG..............................................................................................................................................2614.00400000011020000000
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--..................................................................................................................................................................................2913.00300000021000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG..........................................................................................................................................................................................................................................2513.00300100010100000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTAT-.............................................................................................................................................................................................................................................2213.00300000000000003000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TAA..........................................................................................................................................................................................................................................2513.00300000000000012000
............................................................................................................................................................................................................................................................................................................................CCATGAGATTCAGCT....................................................................................................................................1513.00300000000003000000
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCTCA..................................................................................................................................1813.00300000011001000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCGA................................................................................................................................................................................................................................................2013.00330000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGAC-.............................................................................................................................................................................................................................................2213.00301100000000001000
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1713.00300000000003000000
dm3
TAT-AT-AT--------------GTATATATATCG-ACA-----TAAAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCAAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG----CTCTC-------------AGCTCTCTCTCTCTCTCTCTCCTATTTTATGGTTGT-----CCA--------GSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................2111195161.00119516100004891257825520113166114150154303408702684505222474042119113997961109971256116884511331941898223414653881325639148818562881312422846401428214995108641700000000000000000132613971136809181512410109422122371757194015690641300821296887389205241946057613162027513812560149377038218967082519447641212495308712101132156991449850449458010014161024391390518100820101092120913991097155282542715022309295816588614043149124171544897186410161235079296446301108126121647774176100915110659459622193021727453033769187379425044970911850900560312081082011002505164612004041491712491755270599737133943355711942454267378803372808472200025103034481025142919972529119584006379714098644628925392880319841631596906337511732698238212432104642032128564153608914016348456162949127539947812370787361394711816997477301523935093642591418182412143423158411812238578957952222502619001280866196173591317866813098543359673921377115510207481570138651514089131292184047635124871337319324401265293034811122605207413156825723829841660680180
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................201188622.0018862200007102131202380536002795359331940157361201423119610614711296110162394731093611968120178376492206661692151422813740000000000000000029030024117326431093752750533133484246816140273145441545802124226428564911093127109755810310203312842117284476550080000110576512619011614817615518913064147231348182011001079929633174013261782500158271840154391248143392212618523622042791381271823982232603100940159171000003677511120011968385975028252632241161322793321991061112126794115970000158178219821449831527174364129102994120054236556975615022276113381016769822184266846329441242267596318196571187848212567513142011412714538375811931129171634051250440255440827474657273974223076621880230174828715265910644158816582848376494027931748303512018102915206045981075688994196405317205264216639467102123840
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................22136358.00363580000295101881622420325471300135650391382323473776017221616168297022815202624558143140001082280000000000000000068836858436105741329714060112711133728918529301350871923716030187226693867159727613127762417511115165851145030000020416077522001269199841858435126714350484611172721212501053493512258090110421432527257037513341953148118720191819101072440011416220000010462572403023083533130170195420218714441135214372681000283699671745192101843248256168555122002733112314962148451501643342224397102362626742973566774349519212014258709499165412341639606117529120892339666171361068657548153623124635514513927112168227103438306123296422563640
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................21124323.0024323000025503422618226225008010150500691921353075081297992942184912171431383461318040060000000000000000019191917444421237411382861263380859415457431264952414245405388526124226921132403718130600110003093813150012077121918218684123412670432969903182949156145626102819375084107840392595211487967119258465231130162523127130263691111341021201092573111677299696353741128831218820343321900003021420456940563515950369162190642801323182783128801706723513717716352167103106725126161581781147119711743923416923737416337614814513147615969440739822251289208293623237915873331994239381227122026545224431455632763991022240
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................21120872.0020872000010043225281005002118202115000000019945612627959613242743165342600000000000000000000021423217015194023371111515972221612612107012329282194251395346697416682450104020104013111200000000000814141161135244617101421311000000234321195184531835020318214271184320022462625123333142100018012600000103100000016069604812321373421475142143141300091140000533777111123920201710611013237422433625710943954238101275239825424475117699572914676510490988692717919230595322125158265111110869525699201212742711801501240162206759331319621568207168648165954166351610451178460831150
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................22114076.0014076000010010001001005001820022000000000138249116232414713722141611141039000000000000000000000420104035514300410021000103021454634840101271790401190807600000000002319284531791181001716251100000190310042929022008241291400320020142493317130004129000007330000001614109268119817272981115350046780017701350192691892045831312753579499571084513773126148299337881191966351971471200114817314808954946531398971851531501906935352612702264014714362010405788012619331530802031863891282382794614791868313933125341661630
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................22112743.0012743000000134312000002008131200900000000121314107038671811412203034492180000000000000000000000014167203913397896056219121079010121811048751101413920210283192116510010101501020000000000613345522133514231171273483001000151203697701010110109412302131404330716000101000000818000000196988102810973773951113439379011086000035380131031361410213403831925193031275611333112381221649668954383089801139911115108710197331305688481278353865033011733361165550111029694462641701811245247454710538515172113113511952352760
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................22112180.0012180000010000000031008002540001800258330008511491112411413581111168709809340000000000000000027201816021274444010106278120010164113693129102142427119521441111069540263431900000010000215393744790191012600000410131162859420391030372590771800050411105713682002041000000411000000131510364787422068745440334591008300003501887956222249288313423185784968974920062276120231194420242671362979576848995478594553628527517312170928097134221734132341003552123310412263128525026329866271264194971814114784301015972288991652350
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................2118348.00834800001147711413010100376400190000000361116313524316081927281126101000000000000000000003224212011627259342133205307663002310129738596111322925170700301060413600000000008183515232110181411212212300000240031065030039050121810271402117361311000916000000936000000106614189554711556121700900001010023711730322624619236952420517119278613736443323101821228162882151131765451253646172121816186347101767127437287594372417455114507151302581437261113481761023114224140
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................1914980.004980000000000000000003005413001303532008257341893421742492000100000000000000000003529352011055081600211150200311021214632140010320640200010090200611000100454463450604520900000291042401817031043533863801119651121010800060100000012000000171713162512210121318139719175162911610000405122719262377322475417213356419726243187252044049102377828201131386914012871269421121313212123583123022336164171272145307165181320134101113490384313452910761336800
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................1813407.00340700000000000000010000000400010000000000001100000022000000200000000000000000002115500000030039033204000241022300000000041623091000000200061000000000000001110000000000000000334505031012510363400030060035000000401000200000000001022121045012070111000111974903101141416102151201423255312610156182911820000000023939294289438343516344023460000563395726431260200104120602191363614426056100
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................2012875.002875000020000000001300000002150184691104248011310022103131111100090500000000000000000431762021131300350324130042580231834481180110271900000000003000000000000206920032510014013037015100027306022532001276152610811503801501154500002300002010100001611111618215756579924111410000252041255208315411440151824102233181713104451401016133161435721163137134831621637135413131311111218249202125536191536089714913111110924195190
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................2011967.0019670000000000000000000001100080111612210011112123020311611000110000000000000000009633000510410000020000011007814020000010017010041101142000020010000143211230423200000411910011220103011141161181201020302303011001000000000000000026551012831510811164004000061203154280024462547913743711011571013316124025535153231612113395315221411501301042144314005512320181251121746141100000131221426250
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................2111275.001275000010001100000000000010000000000000101200520001512000000000000000000000000002211001001100100100000003018652210101001001000100000000000000000000001101100000000300160330000350306160010003030000000100000001000000100023210011110300000001121256491062624044332602311512111675331191269319273151207510434119452600127179211900136452701412210110300001001110
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................1811088.00108800000000000000000000150010001022100210000000120331011000000000000000000000007108820001031000200200000070810137120100220010100000011000000000010007010122101310000011515600040100020211001056411132640000002000000200000014161044105002100023010700003420203260020111276731922349912692014271619832111109320240947647386220210111131801133774610000210330010001013333020
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1911066.0010660000000000000000001000010000000000000000000000100010100000000000000000000000000107110388333081930212442006213123386953851613346010000000000000000000000000000001101220000001001115010100011000020000100020100010000000001000000640100010312100000000003101111050020412021230112503317232332141224842330274051321270010114451300228053201000032300001010067000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................1911019.001019000000000000000000000000030740000000000000010000000000001010000000000000000010201000000310140118032000151157101720002006100000000000001400000001006001000200000110800200271310131770427041253038100100111000000000000000000003014316540133427233000000111201006111240101614644253213220400000333106242237471001320000452594323132430102305076920220241611230
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCATC................................................................................................................................241753.007530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562191000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG....................................................................................................................................201490.0049000000000000011000000000000100000000000000010000000100100000000000000000000000000000100010000000000000004124100010000000000000000100000000000000011000011200000001010010201000000091440114400000000000000000011000000101000000010000200000000100120010011052323010303236133112053769781543192223312310300000202332180001000300001052100000000102000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................231424.00424000000000000000000000100003000000000000000400110120000000000000000000000000001010000401200000001000000001420001100002000020000031000000000000200000010021000000110000534000000050302000020022000000000000000000000000006001002220360070000000020214230073120014005004113161241247321024190130935181000100200010001800260611315550030010038314130
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................191400.0040000000000000000000000100000600000000000000000000100010000010000000000000000000012000000120000110000000004350010000000110000210000000000000000000002000001100000020173801203001302010100101800000000010000000000000000554300001450001000000000102012630060212020230080517750321063210234222106000400100000301316000009111341201603200100000626220
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA.................................................................................................................................231370.0037000000001000000000000000000100000000003001420110012230000000000000000000000000001020023100000000000000500141100000000000000000000000000100000215300101016500000000000000000000000000000000000000000100000001700000000010002641522300020000010000000000011110000000100000110034474723353100100100213000101939000007468000010011100100702012020
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................221347.00347000000000000000000000100000000000000000000000000000100000000000000000000000001000000000110000000000010000201000000002001000200000000000000000000030010000000000000100330000330201060010006001000000000000001000000060000041051131300200000000800010501000122100200100014020319212114012210142212102220100023210111062353131126853002600134022110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................181334.00334000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000002402000000000000000000000000000000000000000000000540421032011050201002000010000000000000000000000000010001100030230000000062010010270321010021312321420000000000054012202818360010000000223425011010000010040190000062118000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................201311.0031100000000000001000000000000000000000010100200000000001100000000000000000000000000000000100000000000000001240000000000000000000000000010000000000002000112000000020013001000000100100200030002010000000000000000000020021000010000030010000020102011001011110042000011531305122421441808015125324000101041741900274038182144536001000103114230
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................211305.00305000020000000000000000000000000000000000001100100120000000000000000000000000000100000000400011004100000612141011000003001000000000000000000000000030000120200000000002002620011003001200010000021200000100000000000000010000200002101001000000000021110100124010101011303120221000002100320413342000010011461011024010121321150216000202012100
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................231284.002840000101000000000000000000100000000000000002010000000000000000000000000000000130400000035000002812001016079123451000000010000000000000000000000000000001000000010005000000802000120004030500000000000200000000000000000000102165496440040200000000100000000000000100002000001020000000003113412100010012010200100000300004300001200002949040
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................201272.0027200000000010000100000000000000000000100000100000100200020000000000000000000001100000000102000000000000001583010000000000000010000000000000000000000000000010000050010001000000000100010020010000000010000000000000000000000000000050010000000011100013013012081010761503607115141130407331010120000301143081003412241030125071000000023130100
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................231246.002460000000000000000000001000000000000000010000100000000000000000000000000000000100000000000000100200000000001100000000000010000010000000000000032000100100000000000000000101000000000200000000000000002000000020000002000000311124301000000000001000100001100202011000101100001294352501121000142050000002616010021224203100000000300101102010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGA...................................................................................................................................211232.002320000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000001010000001000000000000100010100001010001000000000000000000000000000000000000000000001000200000206360002200102021280001213183122939671333920101000002001022100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................181229.00229000000000000000000000000001000000002110110000000300110000000000000000000000020200000201000000000000000000220000000000000000001000000000000001000001110000200000150270030002000401000000252023200000000000000000000001520110000000001010000010000010000000000004000000010001008370303000500911264300100100010015033002003021500000000100000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT.................................................................................................................................231228.002280000000000000000000001000000000000000010000000000010000000000000000000000000010000020020000200000000000013440000001000000000000000000000000002000000010000000000000010010000020000000000100000000000000000000000000000110010221000100000000000100120010200110020110006211010112123118010112060100100000100403003241102041000241000000001812320
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................231226.00226000000000000000000000000000000000000000002000000010000000000000000000000000001000600150000000100000000023422000301000000000000000000000000001400202000000000000000000010000010000100000000040000000000000003000000000000001613423000000000001000020000000000000000110000011448619432261000000011000032212000000342000000010000000000000020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT...........................................................................................................................................................................................................................................241193.0019300000000000000000000110000000000000010000100011000000000202000000000000000000000030302000000000000000000000100000000000000000000001200011020240305100000000000000000000000000000000000000001020000000100030100000000050021712402126353001000000000000000000000000000000000000000000000000000000000000000400010000300000000000000000001000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................221173.0017300000000000001000000000000000000000001000020011001000000000000000000000000000010330640376015004110033703821315000000000000000000000000000000001100100000000000001010002100000000000300010000000000000000000000000000000000031111301010000000000050010000000000170010002004011000102000010000112000000000000040000200000000100000000320000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................221167.001670000000000000000000000000000000000000010029000000210100000000000000000000000000010007011000102300000100152041000100040000000000200000000000000000000010000000000000011101200000001000100000000000000000000000000000001000201000010000000010010621200002115204021001100020010000021311101000010001010301600218001000001001000000000017010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................221166.00166000000000010000000000000000000000000000000000000000000000000000000000000000011100000001000010010000000001202100000000000000000020000000000000000000000000000000900000020000000110000000000101100000100000030000000020000000010000000100000000210010100110001010011005003011191193130710100101000000011071100112224122003104000100000110010
.................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTCTCCTAT............................182165.00330000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200006017010795188109000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................231157.0015700000000000000000100000000000000000001001100000000000000361400000000000000000220002060124000001100000000434131100000000000000000000010110500001100010000010700000000000100010001000200000000000000000000000100000000000000031103660001012000000000000000100000000000000000000000000000000010101000001210000011110000001000000000100100010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................231149.0014900000010000000000000000000000000000000000100000000000000000000000000000000002212040423030012003100001218711111121000000000000000000000000010000107000001000200001000006020201000000000020000000000000000000000000000000000042114222000010000100000000000000000200000000020000000100030000000100000000200000050301100000000000100010200000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................211148.001480000000000000000000000000000000000000000000000000001000000000000000000000000000001012404112031044010023180643193913123100000000000000000000000000000000000000000000000000000210000000000030000000000000000000000000000000000011001011000000001100000000000000000000000000000001010000001000000000000100000000040000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................221147.00147000000000000000000002000000000000010000000100000000000100000000000000000000010000430140000000000000000052605000000200000000000001000000000010000101000000000000000000000000000000000000000010000000000000002000000000010000000000000100001000100000011100000100000002000000324114119110000111001100010500000130055000000010000100000000010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA.................................................................................................................................231146.00146000000000000000000000010000000000000010000000000010000000000000000000000000000000300010000000000000000001000000000000000000000000000000000000200222000100000000000000000000000000000000000010000010000000025000000000000001011710000000000000000000000000000000000000000000228523230121000000000000032301000000104000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCT....................................................................................................................................181122.0012200000000000000000000000000000000000000000000000000000000000000000000000000000000100000510020110000000006122650200102000000000000000000000000000000000000000000000000000000100000000000000300000000000000000000000000100010000000000000000000000000000000100000010000112110120091503030100100000000000200000003120010101100300000000011000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................211107.00107000010000000010000000020000000000000000000100000010000000000000000000000000000000000011300000010100003012350200000000000000000000010000000000000000000000000110000000311000001100210000100000000000000000000000000000001000000000000000000000000000000010021000100000100011000000000021005101000000000000301140000000000000100100300210010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................201102.001020000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000100010000000000000000000001000000000001410141003000300010000000000000000000000000000000010000000110000000000002000100000010000101000000000010000000000100132440000000000000140000100001000000601010010010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT.....................................................................................................................................19199.009900000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000020000010000000000000400010030200001020000000000000010300000000000100010000000000011020011000030010002102011100000100030040001000020000112000200131010210012010000013012100
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TC...........................................................................................................................................................................................................................................24196.009600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001006330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---......................................................................................................................................................................................................................................26185.0085000000001000000000000000000000000000000000100000010000000000000000000000000000010000010000000000000000000000000000000000000000000200031200001170100000000000000000000000000000000001000000000000000000000000000000000000070110111161000000000000000000000000000000000000000000000000000000000004000001201000010100000000000000001110010000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA................................................................................................................................24181.0081000000100000000000000100000000000000000102000000000000000000000000000000000001000300000000000000000000010102000001000000000000000000000000010000002000000000000000000000000000000000000000010000000000000000000000000000000003102200000000000000000000000000000000000000000121203119010000000001000000300000000201000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................21180.008000000000000000000000000000000000000000000010000010000000000000000000000000001010000000010000010000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000011000000010000000001022000000000000201200001004016070040200000000001201120000000002001001100000000001010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.............................................................................................................................................................................................................................................22176.0076000000000000000010000000000000000000000000100000200000000000000000000000000000001502101300110230000110024271400000000000000000000000000000000000010000000000000000001000020001000000020000000000000000000000000001000000001001010002000000000000000000000000000010000021000000001000000010001100010000000011010200001000100000000000100
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................19174.007400000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001002000000000000000000000000000000000000000000000000000000000000000000000014001000100140000000000000000000000000000000000000000000100000100000000010000010000000010000000000000000000000000008410100000010000000130000000002000001721102000000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................23174.0074000000000000000000000000000000000000000000000000010000000000000000000000000002000003001200000010000001002101100000000000000100001000000000000000000000000000000000000000000200000000000000000000000000000000000000000000161003301400300000100010010020000001100000001000101001104000000001100101000000000009000000000200100000000000000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20172.0072000000000000000010000000000000000000000001000000000000000000000000000000000000000000000100000040300000033761100004200000000000000010200000101000000000000000100000100100230013000000000000000020000000000000000000200000100000000000000000000000000000000000000000000000000000010000000000010000100000000070020000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAT.................................................................................................................................23171.00710000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000011000000000000000000000000100000001010000000020000000000000000000000000000000000110110000173000000000000000100010000000000012000130806100020000210000000101000000000000000000000200000011110
droEug1
TAT-AT-AT--------------ATATCGATAGCG-ATATCG---ATAACCT----GTCGCCA----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCCGG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCACC-----AACATCTCTCGC-TCTATTCAG-------------------CTC-------TCTATC----------TCTCTATGTTTGT-----CCA--------ASizeHit CountTotal NormTotal
No Reads
droBia1
TAA-AT-AT------------C------TGTATCG-ACA-----TATAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTGTCTCCCTGTCCTCCCCTATGTTTGT-----CCA---------SizeHit CountTotal NormTotal
No Reads
droTak1
TAT-AT-A--------------------TATATCG-ACA-----TATAACCC----GCCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTGT-CAG-------------------CTC-------TCTCT-----------CCTCAATGTTTGT-----CCACGGCA---ASizeHit CountTotal NormTotal
No Reads
droEle1
TAT-AT-AC------------TTGTATAAACATCG-ACA-----TATTACCC----GTCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCT-------TCCTCTTCTATGTTTGT-----CCACGGCAAAAASizeHit CountTotal NormTotal
No Reads
droRho1
CAT-AA-AT--------------GTATATATATCG-ACA-----TACAACCC----GTCGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTC-------TCTCT-------TCCTCCTCTATGTTTGT-----TCA--------CSizeHit CountTotal NormTotal
No Reads
droFic1
TAT-AT-A--------------------TATATCG-ACA-----TATAACCC----GACGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TCTAT-CAG-------------------CTCAGC----TCTCTA------TCCTCCTCTATGTTTGT-----CCACGGCC---ASizeHit CountTotal NormTotal
No Reads
droKik1
TGT-AT-ATA-TATATATATTA------TGTATCG-ACA-----T--AACCC----GACGCCT----------------------------------------------------------------------------------------------CGTCAGCAAATTCGTTCGTC--CTCTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT------------------TCCGG--GGGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACCAAAACAACATCTCTCGC-TCTATTCAG----CTCTC---------------------CTCTA------TTCTCTACTCT----------------------GSizeHit CountTotal NormTotal
No Reads
droAna3
TATTATAATACTATATAT---ATGTATATATATCGGACA-----TATAACCCCGACGACGCCT----------------------------------------------------------------------------------------------CGTCAGCAATC----TCGTCTCCTCTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC-AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCACCAAA--AACATCTCTCGC-TC------G-------------------CTC-------TCGCTC------TC--GCTCTATCTTT-T-----CCTTGGAA---CSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21126731.00267312241172499536099049275
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2012356.002356283981323821451271
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2211993.0019933013036216281553
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2111103.001103487451017086305
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221905.0090542479610615437
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................221830.00830669352242278
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................181774.0077497502091462
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211548.005481429721785088
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201350.0035024720353531
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191302.0030214121382892
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................211294.00294015017912106
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191132.00132165816042
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................201125.0012501220102
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20182.0082224611012
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................18280.50161800170136
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................22173.007334561405
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20162.00629105641
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21159.00595900000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22156.005604120328
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23151.005115117225
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21142.004207121319
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20140.00403900010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21133.003381021012
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................23130.00300300000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................22125.00250191005
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................19121.00211200405
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT................................................................................................................................24120.00200113015
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................19119.00191900000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18116.0016004507
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................18113.00131300000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA.................................................................................................................................2319.009180000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG.................................................................................................................................2319.009000405
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................2319.009050103
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTA..................................................................................................................................................................................................................................................1819.009300402
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1919.009220104
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................2218.008600200
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA...................................................................................................................................2117.007061000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTA................................................................................................................................................................................................................................................2017.007200005
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1917.007310102
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................1916.006200112
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................2016.006410010
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2116.006600000
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2016.006600000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................2115.005100112
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................2215.005030101
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................2114.004100012
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA................................................................................................................................2414.004040000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT...........................................................................................................................................................................................................................................2414.004220000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTG..................................................................................................................................................................................................................................................1814.004000103
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTT...............................................................................................................................................................................................................................................2114.004100201
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTG.................................................................................................................................................................................................................................................1933.6711000425
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................2213.003100200
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCA..................................................................................................................................2113.003030000
....................................................................................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAG......................................................................................................................................2113.003000201
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1813.003000102
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG..........................................................................................................................................................................................................................................2513.003300000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGT...................................................................................................................................................................................................................................................1713.003000300
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C.....................................................................................................................................................................................................................................2713.003210000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................2013.003120000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCGT.................................................................................................................................2312.002010100
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTCA...............................................................................................................................................................................................................................................2112.002100001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCGC.................................................................................................................................2312.002000200
....................................................................................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGC.....................................................................................................................................2212.002010100
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG..................................................................................................................................2212.002000101
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................2312.002200000
droBip1
TGT-AT-GT--------------ATATATATATCG-ACA-----TATAACCC----GACGCCT----------------------------------------------------------------------------------------------CGTCAGCAA------TCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC-AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGC-TC------G----CTCTCGCTCTATCAAATC-------TCTAT----GTCTCCTACTCTAT-----------------------SizeHit CountTotal NormTotal
No Reads
dp5
TGT-AT-AT------------A------TGTATCG-TT---GAAAAAATCCC----GACGCCT----------------------------------------------------------------------------------------------CGTCTGAAATATATATCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCCAG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGCCTCGCCTCGCCTCGC-CTCGCTATATCTACTC-------TATCTC------TC------------TGT-----CTA--------TSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21127503.002750307079516774936794922516325377
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2011718.0017180110126362191816914315
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2111491.001491114903820729412844112167
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................221707.007071930012821582582211115
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201611.006110389214413722101617
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................221444.0044404541161761085017
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191385.0038534158242212614214
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211240.00240016546832635002
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221167.0016709193055442701
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................201161.001610662258851001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................221144.001440663432560001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191124.001240518413551001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................201102.00102002576010000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................21160.00600177025110000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21160.0060015021258225
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................18156.0056182211230000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20135.003503400000001
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................19133.003303300000000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21123.002302300000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23123.002304051130000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................19121.002101901100000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................19118.001801016010000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21115.00150134430000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20113.00130710041000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................19110.00100301130002
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................2219.0091302111000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................1819.0090900000000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2117.0070601000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................2216.0060500100000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................1816.0060000150000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................2315.0050410000000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................2015.0050310010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................2314.0041111000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................2114.0040100120000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................2014.0040100030000
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1914.0040400000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................2314.0040110010001
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-.............................................................................................................................................................................................................................................2214.0040200020000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................2114.0040101200000
........................................................................................................................................................................................GTGTCAAATTCATTTTGGA....................................................................................................................................................................................................................................................................1914.0040300100000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................2213.0030000030000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................2213.0030011100000
.....................................................................................................................................................................................................................................................................................................................TGTAGCACCATGAGATTCAGCTC...................................................................................................................................2313.0030003000000
...................................................................................................................................................................................................................................................................................................................TTTGTAGCACCATGAGATTCAGC.....................................................................................................................................2313.0030000001002
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGGT-A............................................................................................................................................................................................................................................2313.0030000000030
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1813.0030300000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................2313.0030000000003
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTA...................................................................................................................................2013.0030300000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTA................................................................................................................................................................................................................................................2013.0030200010000
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1813.0030201000000
..........................................................................................................................................................................................................AACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2212.0020100000100
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCTT.................................................................................................................................2212.0020200000000
.......................................................................................................................................................................................CGTGTCAAATTCATTTTGGA....................................................................................................................................................................................................................................................................2012.0020110000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---C.....................................................................................................................................................................................................................................2712.0020110000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA...................................................................................................................................2112.0020200000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA.................................................................................................................................2312.0020200000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................1912.0020100010000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG....................................................................................................................................2012.0020000200000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTC................................................................................................................................................................................................................................................2012.0020010010000
......................................................................................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCTC...................................................................................................................................2212.0020200000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................2212.0020001000010
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-ATT------------------TCC................................................................................................................................................................................................2112.0020101000000
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGT...................................................................................................................................................................................................................................................2112.0020200000000
droPer2
TGT-AT-AT------------A------TGTATCG-TT---GAAAAAATCCC----GACGCCT----------------------------------------------------------------------------------------------CGTCTGAAATATATATCGTC----CTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCCAG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------AACATCTCTCGCCTCGCCTCGCCTCGC-CTCGCTATATCTACTC-------TATCTC------TC------------TGT-----CTA--------TSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21121683.00216833097855667813854169
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2013420.003420118891031219388
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2111202.00120245697360591130
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................221634.006345652299209
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221398.0039801241122574
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191359.00359201107323025
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................221353.0035304131202133
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201331.0033117001109357
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211181.00181012451285
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191102.0010201348491
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................18190.009072015660
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................22179.007901520530
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................21153.005304421240
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21147.004702015246
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23130.00300109200
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20130.00300151770
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18126.00260012230
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.............................................................................................................................................................................................................................................22125.00252500000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21121.00210011190
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG....................................................................................................................................20114.00140002120
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22111.0011001181
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................2018.008000170
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1918.008080000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT.................................................................................................................................2317.007000160
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2017.007070000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1917.007010420
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1916.006000330
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................2116.006000150
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................2015.005000131
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGA...............................................................................................................................................................................................................................................2115.005000131
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................1914.004300010
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1813.003100110
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................2313.003010020
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2113.003030000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC..................................................................................................................................2213.003000030
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT................................................................................................................................2413.003000120
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................1913.003300000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................1822.505000140
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTTT...............................................................................................................................................................................................................................................2112.002000020
droWil2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT-GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAT------CACA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................21141098.00410982325267032445315184
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2219370.009370830651022355177
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2014309.00430986815522801798
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................2112124.002124983651762205
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2211423.00142351917618764
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................211641.0064121910552149116
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221527.00527166307207
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................211346.00346014126071
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................181329.0032929070131
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.............................................................................................................................................................................................................................................221259.002592590000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191202.0020217821417
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................221131.001311627745
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................19193.00932105436
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................20187.008720458311
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20187.008704301727
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18151.00510003714
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21139.0039336000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22134.0034023920
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................23130.0030251022
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................19124.0024020814
....................................................................................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGC.....................................................................................................................................22121.0021000183
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................22117.0017151001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................21117.0017000161
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................19113.0013120001
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................20111.001108030
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................22111.001101091
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21111.001191100
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................19110.001091000
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT-................................................................................................................................................................................................29110.0010100000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................2319.00962100
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................2019.00920034
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2018.00808000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCTC......................................................................................................................................1827.501500069
....................................................................................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGT.....................................................................................................................................2217.00700070
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTGA---......................................................................................................................................................................................................................................2617.00704030
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................2317.00750020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................1817.00730004
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA.................................................................................................................................2316.00600060
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................2216.00660000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................2116.00605001
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................1916.00605001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................2316.00600042
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................2116.00660000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................2316.00600051
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................2215.00503002
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1815.00530020
....................................................................................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAG......................................................................................................................................2115.00500023
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................2315.00502030
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................2115.00500050
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................2014.00401030
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................2013.00300003
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GC..........................................................................................................................................................................................................2013.00320010
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1913.00303000
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCTT........................................................................................................................................................................................................2213.00330000
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................1913.00303000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................1913.00330000
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTCT..................................................................................................................................1913.00330000
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTT...................................................................................................................................1812.00202000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGC.....................................................................................................................................1812.00201010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA...........................................................................................................................................................................................................................................2412.00220000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA................................................................................................................................2412.00200020
....................................................................................................................................................................................................TTTTGGAACTGAATTCTCGTGGG....................................................................................................................................................................................................................................................2312.00200011
..................................................................................................................................................................................................................................................................................................................TTTTGTAGCACCATGAGATTCA.......................................................................................................................................2212.00201010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG..................................................................................................................................2212.00200002
................................................................................................................................................................................................................................................................................................................AATTTTGTAGCACCATGAGATT.........................................................................................................................................2212.00201001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAC..................................................................................................................................2212.00200011
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA.................................................................................................................................2312.00200020
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TG...........................................................................................................................................................................................................................................2412.00220000
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................1812.00202000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CTG..........................................................................................................................................................................................................................................2512.00201010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTCA...............................................................................................................................................................................................................................................2112.00202000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG.................................................................................................................................2312.00201010
..................................................................................................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCT.........................................................................................................................................................................................................2112.00210001
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................1812.00202000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT.....................................................................................................................................1912.00200011
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCA...................................................................................................................................2111.00100010
...................................................................................................................................................................................................................................................................................................................TTTGTAGCACCATGAGATTCAG......................................................................................................................................2211.00110000
..........................................................................................................................................................................................................................................AACACTG--ACC-GCT---------GCTTTAAACCT-GG---G..........................................................................................................................................................................................2711.00101000
...................................................................................................................................................................................................................................TGA---CAACACTG--ACC-GCT---------G...........................................................................................................................................................................................................1811.00100010
droVir3
TAT-AT-AG------------A-GAAT--GTACAG-ATA-----T-CAACCC----GCCGCCTTTATGTCGATGTTTTTTCGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAAATGGAAACCATT-----------TGCTCGCAA--CG--CGCAA------GCG-------------CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................211304401.003044015432016657754882093671141210459754431143542101603843381100411195614637156410741402147595137692176596377685934527633143942481428196614301480559953322255286548205172158327193333193122145119815412237718234482199411616112918912117957564776658471471870694352141500308152643832218
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................21122520.00225200235839082423115935214939441134154232009027629515048439327517909199451149140692889547611492144722612293001651073683010113314354557732137619318805530819322817382674041577370272239319396
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................20115499.001549902181111615229849229134219692371541589960118141874632159715774785326526476438633698321833921811882451566734930000101221231000148127521265258122881067434282016323343161136131175
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2219039.00903900100102392038531530851365729806242701148694105120182168328364160379414830453631511042455252674983241291159190300929394533331252015422241449588098801172
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2217534.00753487714776198832402810692010783210232892130313827264321776946942181250223000389641119068144861911408980762110914731397803445623128643923526928329729149125
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................2112641.002641002913511076219222141571115534510713713358161113493118481311714116238012030120000000000030001000018108273616108003113352283745
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2111906.00190657146269341793262313458011121239414541550271140257974409105310211462000111236183234201413104157015652111323178101532133
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................2211755.00175500362819917016032711171161914492013443630605925342059531268798358471600010000001000000005654230181548733803236020807287102
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................2211318.001318001334924233700008231143108148348914201201136716939314256930100031115411200115910300038206500045554422548
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................1811295.00129579498642428194720495100288787541451165974736142502500004270000111110102214121266100000014144814600011
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................191879.008796541232132418721010001711275319261230561614624023000041500000000000000001200331300200038109101100110
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191784.00784002131511311140206353461452442214131421255314645861512000000102101110002052020083941504310201549226896
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................231686.006860084300000000020000001041131042001160181748127000000000000000000000000181357853400000018646454108
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................201410.00410002152542102000100101102203361220234221101220000000000000000000553881301312000111671518
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC..................................................................................................................................221308.00308003431700000000021202430070211433818370310001338000000000001000000001501000000000001110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201288.00288396120150922200011647325311325215114110810002600000000000000000000183203803002003000010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................231284.002840051513000000010333931110741287263411335701312180000000000000000000013300424522000116031
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAA................................................................................................................................241274.00274001000000000000000000000001010112011500000000000000000000000000203028210020001435274952
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................231266.00266004101100000000000112203444364235111420491000000000000000000011001014207000000626252638
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................221219.002190033203000000000000020051251561201839102531310000000000000000000000063917900000006151210
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAAA.................................................................................................................................231219.0021900130004000001000000000038113100007153582320000000000000000000000005119510000000116712
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAA...................................................................................................................................211207.0020700000000000020000000000010010001200031300000000000000000000000000121912000000347292645
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................211206.002060023405501000101101090073437352510215100750100000100000000002250002102240320002541118
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAAA...............................................................................................................................251204.0020400000000000000000000000000000000000150200000000000000000000000000212512000000241213440
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................181194.0019400102051731600010010001413864691319413163322112000000000000000000004302410101000010001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAA................................................................................................................................241184.0018400602000000000000000000041422101104320250000000000000000000010002017144000000230131825
.............................................................................................................................................................................................................................................................................................................................CATGAGATTCAGCTC...................................................................................................................................151175.001750000000000000000000000000000000000000000000114381682017121312151282500000000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.............................................................................................................................................................................................................................................221145.00145498700000000000000000000000000000000000000000010000010100000101100000000010000101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................221136.0013600103140000011100120232564381521240847622000000000000000000000106317400000023323
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................231117.0011717120100000000000000000041095100000000010000000000000000000000001261103178115611021
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................18198.0098167004210274000421200440202007114040000020000000000000000000010000000001011200000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................19191.009157000040000000000000010000000110602000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................19175.007500131001010000100000000153133111311102002000000000000000000010001000003010009743
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................20174.007400024111010000011000050110121563801011112000000000000000000002100100000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT................................................................................................................................24162.006200200000000000012101211100017143810000103000000000000000000005000010100100001201
..........................................................................................................................................................................................................AACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................22161.006100000000000000000000000000000000000000000000000000000000000000610000000000000000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................20160.006000430110010000020001000110013102000000010000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22158.00580011200001000000000020211221351411020014000000000000000000016400022000000001211
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTAA.................................................................................................................................23158.00580020000000010000100000001200000000049100000000000000000000001002166200000032167
............................................................................................................................................................................................................................................................................................................................CCATGAGATTCAGCTC...................................................................................................................................16150.005000000000000000000000000000000000000000000000143153562221211200000000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-GTG-------C..................................................................................................................................................................................................................................26146.00460010220000000000000010012533201221423130000000000000000000000003000000000000011
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................18144.00440251021002100000000010071121060012000010000000000100000000110100000000000011010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCG.................................................................................................................................................................................................................................................19142.004252820000110000010000000000000000000000000000000000000000000001100000002000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA.................................................................................................................................23142.00420000011000010000010000010000000120126411000000000000000000000000025000000014205
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21142.004201380000000000010000000000000000000000000000000000000000000000000000001000010000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTC................................................................................................................................24141.004100000000000000000000400000005351308000002000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTC.................................................................................................................................23138.00380000100000000000000050000000295900000001000000000000000000000000011300000010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCA.................................................................................................................................................................................................................................................19137.003711250000000000000001100010000040200000101000000000000000000003500000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCT.................................................................................................................................23135.00350000000001000001000021001000541715000003000000000000000000000102000000000000000
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................19134.003400232000001000000000000000000131000000010000000000000000000000000200000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................23133.003301130000000000020020011011001010000000000000000001010000000100400000101000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................21133.00330000205000000000000200041000131201010033000000000000000000010000100000000000101
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20130.003000270000000000000000000000001000100000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................20130.00300000000000000000001000010010130000101000000000000000000000002100014100000023025
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTT................................................................................................................................................................................................................................................20128.00280300060000000020021110000000211103000002000000000000000000000200000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21128.00281310010010000022000030300001200300000002000000000000000000001100000000000000010
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTA..................................................................................................................................................................................................................................................18126.00261250020100000011011001020000100102000001000000000000000000003000000000000000000
......................................................................................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCTC...................................................................................................................................22125.00250030000000000000000000000000000000010000000000000000000000010001010000000004842
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................21125.002500111000000000010010100000111110001000100000000000000000000011000010000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG.................................................................................................................................23123.00230010102000000010010000010110210200000000000000000000000000000000002000000010114
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.............................................................................................................................................................................................................................................22122.00220020213000000001011302010001001000000001000000010100000000000000000000000000000
.....................................................................................................................................................................A------GCG-------------CAAATTCATTTTGGA....................................................................................................................................................................................................................................................................19122.00220000000000100000000000001364100201000001000000000000000000002000000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-GT...........................................................................................................................................................................................................................................24122.00220100005000000000000000000012001022000020000000000000000000000000200002020000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTG..................................................................................................................................22121.00210030003002000020000010000000001310000000000000000000000000001000001100000000020
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAAA...................................................................................................................................21119.00190000000000000000000000000000000000000000000000000000000000000000032100000004252
....................................................................................................................................................................AA------GCG-------------CAAATTCATTTTGGA....................................................................................................................................................................................................................................................................20119.00190000010000000100000000030103300300000021000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCAA................................................................................................................................24119.00190000000000000000000000000100000200010100000000000000000000000000021000000006320
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGA.....................................................................................................................................19118.00180000000000000000000000000000001100001000000000000000000000000000012000000003054
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCC.................................................................................................................................23118.00180010100000000000000040000001102104000002000000000000000000000100000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................22116.00161801000000000010100100000000000000000000000000000000000000001100000000000010000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-GTG-------CAC................................................................................................................................................................................................................................28116.00160020000000000000000000000122000010100110000000000000000000000002010000000000011
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTA................................................................................................................................24116.00160000000000000000000010000000422010000001000000000000000000000000300000000000011
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAT.................................................................................................................................23115.00150000000000000000120000101010200100012100000000000000000000010000001000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G............................................................................................................................................................................................................................................23113.00130020300000000000010000001010000000000110000000000000000000000000000001010000010
...........................................................................................................................................................................................................................................................................................................................ACCATGAGATTCAGCTC...................................................................................................................................17113.00130000000000000000000000000000000000000000000010000000100000000000120000000020114
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................20113.00130130000000000000010000001010010100000000000000000000010100100000000000001000000
...................................................................................................................................................................CAA------GCG-------------CAAATTCATTTTGGA....................................................................................................................................................................................................................................................................21112.00120000000010100000000000001032001000000010000000000000000000000200000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTCC................................................................................................................................24112.00120000000000000000000020000000211400000002000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGT.....................................................................................................................................19112.00120000000100000000000000000000110300000112000000000000000000001000001000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAA....................................................................................................................................20111.00110000000000000000000000000000000000000000000000000000000000000000001100000000135
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAAA..................................................................................................................................22111.00110010000000000000000000000000000000000000000000000000000000000000003200000000320
..................................................................................................................................................................................................................................GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-AT........................................................................................................................................................................35110.00100000000000000000000000000000000000000000000000002010141000100000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAAA.....................................................................................................................................19110.00100000000000000000000000000000000000101000000000000000000000000000003200000010101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTGA..................................................................................................................................22110.00100001000000000000000010000000000000000000000000000000000000000000012000000011021
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGG...............................................................................................................................................................................................................................................2119.0093500000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTCC.................................................................................................................................2318.0080010000000000000000020000000001200000002000000000000000000000000000000000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T............................................................................................................................................................................................................................................2318.0081500000000000001000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTAT................................................................................................................................2418.0080000000000000000000000000000030010000001000000000000000000000000001000000000002
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTT...................................................................................................................................1818.0080100002010000000000001000000000000000011000000000000000000000000000100000000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTC.................................................................................................................................................................................................................................................1918.0080010000000000000000030000000000101000010000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAAC................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000010000000003211
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................2318.0080330000000000000000000000000000000000000000000000000000000000000000020000000000
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTT...................................................................................................................................1918.0080010001000000000100000001000000310000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTAT.................................................................................................................................2317.0070000000000000000000000000000041000000100000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAT...................................................................................................................................2117.0070000001000000000000000010010010000000010000000000000000000000000001000000000100
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCA-AACATGCATTCAC-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................211193355.0019335511094423498670091730652763
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................21125206.002520655736229637823119494
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2215606.0056063768681502561006358
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................2014889.0048891172185737562719506
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................2212721.00272167248217257186567
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2112014.00201474727234384329293
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................2211341.001341225191812725
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................2011282.00128210031511712
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................221756.0075629719310241942
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC....................................................................................................................................201653.0065300116510
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................211587.00587202722194927
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................191462.00462888204144
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................211269.0026926800010
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG...................................................................................................................................211232.00232117422080
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC..................................................................................................................................221176.00176514314122
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................201164.00164570011051
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................201140.00140773916431
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................20172.00727101000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................18169.0069902115204
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................23169.0069322524141
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................22168.00688055473
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................22148.004800925122
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................23144.004410012301
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.............................................................................................................................................................................................................................................22143.00431318786
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................23141.00413303041
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................19138.00386211253
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCT...................................................................................................................................21135.00351012310
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA..................................................................................................................................22133.003310000230
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................19130.00301112538
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................18125.0025149803
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................23124.002410010130
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT................................................................................................................................24123.00231061312
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................19122.002210000111
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................21121.00211110090
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A............................................................................................................................................................................................................................................23119.00191400320
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGT...............................................................................................................................................................................................................................................21118.0018203436
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCC..................................................................................................................................21118.00182000160
.....................................................................................................................................................................................................................................................................................................................TGTAGCACCATGAGATTCAGCTC...................................................................................................................................23117.00170000170
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................20116.00161600000
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCACTC....................................................................................................................................20113.00130000130
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................18112.0012505200
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGT...................................................................................................................................21111.0011000371
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA.................................................................................................................................23111.0011221240
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................19110.00101000000
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C............................................................................................................................................................................................................................................23110.0010700120
.......................................................................................................................................................................................................TGGAACTGAATTCTCGTGGGTCC.................................................................................................................................................................................................................................................23110.00100000100
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTC.................................................................................................................................2319.009001170
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAT...................................................................................................................................2119.009000090
droGri2
TAC-AC-AC--------------ACATAAGT--CA-TC---GAAT-TAACCC----GCCGCCTTTATGTTGCTC-----------------------------------------------AAATGGG-ACCATTCTGTATATCAATCCAATCAACGC----GCAA------GCG-------------CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GC-AG--AGGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCA-AACATGCATCCAC------CAAATCA----------------------------AATCAAATC-------A--------------------------AT-----CAA--------ASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC...................................................................................................................................2111155.001155468687
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT....................................................................................................................................201394.00394155239
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT...................................................................................................................................211340.00340168172
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................221332.0033228646
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................211151.0015110150
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT..................................................................................................................................22181.00816318
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC...................................................................................................................................20139.0039381
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA..................................................................................................................................22133.0033924
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................21126.0026260
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTT...................................................................................................................................20118.0018180
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTG................................................................................................................................................................................................................................................20118.0018126
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCT....................................................................................................................................19118.0018180
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC.....................................................................................................................................19117.0017125
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTCT..................................................................................................................................21110.0010100
............................................................................................................................................................................................................CTGAATTCTCGTGGGTCTGC...............................................................................................................................................................................................................................................2016.00660
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T............................................................................................................................................................................................................................................2314.00431
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA...................................................................................................................................2114.00431
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC...................................................................................................................................1914.00440
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA..................................................................................................................................2213.00321
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG......................................................................................................................................1812.00211
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCT.................................................................................................................................................................................................................................................1912.00220
.............................................................................................................................................................................................................TGAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................2012.00220
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA....................................................................................................................................2011.00101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTC................................................................................................................................2411.00110
..........................................................................................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC...................................................................................................................................1811.00110
......................................................................................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCT....................................................................................................................................2111.00110
......................................................................................................................................................................................................TTGGAACTGAATTCTCGTGGG....................................................................................................................................................................................................................................................2111.00101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT.................................................................................................................................2311.00101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG..................................................................................................................................2211.00110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G............................................................................................................................................................................................................................................2311.00110
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCT....................................................................................................................................1811.00110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTC..................................................................................................................................................................................................................................................1811.00110
.........................................................................................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTCT..................................................................................................................................2011.00110
..............................................................................................................................................................................................................GAATTCTCGTGGGTCTGCA-.............................................................................................................................................................................................................................................1911.00110
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCAA.................................................................................................................................2311.00110
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC..................................................................................................................................2211.00101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTGA................................................................................................................................2411.00101
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTTA.................................................................................................................................................................................................................................................1911.00110
......................................................................................................................................................................................................................................................................................................................GTAGCACCATGAGATTCAGCTT...................................................................................................................................2211.00110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTT..................................................................................................................................................................................................................................................1811.00110
........................................................................................................................................................................................................................................................................................................................AGCACCATGAGATTCAGC.....................................................................................................................................1811.00110
....................................................................................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGCTC...................................................................................................................................2411.00110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA...........................................................................................................................................................................................................................................2411.00110
...........................................................................................................................................................................................................ACTGAATTCTCGTGGGTCTGTT-A............................................................................................................................................................................................................................................2311.00101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC..................................................................................................................................2220.50101
.......................................................................................................................................................................................................................................................................................................................TAGCACCATGAGATTCCCT.....................................................................................................................................1990.11101

Generated: 10/20/2015 at 11:18 PM