ID:

der_22

 Coordinate:

scaffold_4770:5101926-5101986 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-52.7 -52.7

Flybase annnotation

intron [Dere\GG24088-in]; utr5 [utr5_plus_11464]

No Repeatable elements found

Sense Strand Reads

TTATTATCTTGGACGCGTTCCTGACGAATGTCATTCACCTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCTGTTTTCAGGATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACATCAGCGGTTTTTGCTAGACAACGGTTATCTACAATTA

***********************************..((((((((.((.((((.(((((((((((..(((((((((....)))....)))))).))))))))))))))).)).))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 M057

embryo

 V108

head

 V107

male body		 V060

head

 V040

embryo

 GSM1528801

follicle cells
.........................................................................................TAGCACCACATGATTCGGCTT................................................... 21 0 1 44981.00 44981 28559 8316 4556 1996 1000 526 28
.........................................................................................TAGCACCACATGATTCGGCT.................................................... 20 0 1 2879.00 2879 1325 338 785 283 91 57 0
.........................................................................................TAGCACCACATGATTCGGCTTT.................................................. 22 1 1 1529.00 1529 1128 95 166 79 49 12 0
..........................................................................................AGCACCACATGATTCGGCTT................................................... 20 0 1 1301.00 1301 1278 12 9 1 1 0 0
.........................................................................................TAGCACCACATGATTCGGCTTA.................................................. 22 1 1 580.00 580 440 47 47 34 10 2 0
.........................................................................................TAGCACCACATGATTCGGCTG................................................... 21 1 1 538.00 538 222 174 4 1 5 132 0
.........................................................................................TACCACCACATGATTCGGCTT................................................... 21 1 1 521.00 521 76 429 11 5 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTC................................................... 21 1 1 481.00 481 12 459 2 2 4 2 0
.........................................................................................TAGTACCACATGATTCGGCTT................................................... 21 1 1 336.00 336 15 315 5 1 0 0 0
.........................................................................................TGGCACCACATGATTCGGCTT................................................... 21 1 1 261.00 261 32 222 0 6 0 1 0
.........................................................................................TATCACCACATGATTCGGCTT................................................... 21 1 1 255.00 255 180 7 54 13 0 1 0
.........................................................................................TAGAACCACATGATTCGGCTT................................................... 21 1 1 197.00 197 166 0 26 2 0 2 1
..................................................GCCCGAATTATGTGGGAGCTGCG........................................................................................ 23 0 1 177.00 177 47 21 65 20 12 12 0
..................................................GCCCGAATTATGTGGGAGCTGC......................................................................................... 22 0 1 176.00 176 14 15 107 21 9 10 0
.........................................................................................TAGCACCACATGATTCGGCTTAA................................................. 23 2 1 170.00 170 153 11 3 2 0 1 0
.........................................................................................TAGCACAACATGATTCGGCTT................................................... 21 1 1 159.00 159 117 0 38 2 2 0 0
.........................................................................................TAGCACCACATGATTCGGCTA................................................... 21 1 1 150.00 150 116 19 10 3 2 0 0
.........................................................................................TAGCACCACATGATTCGGCTTC.................................................. 22 0 1 122.00 122 70 19 12 8 7 6 0
.........................................................................................TAGCACCACATGATTCGGC..................................................... 19 0 1 121.00 121 57 11 43 6 4 0 0
.........................................................................................TAGCACCACATGATTCTGCTT................................................... 21 1 1 115.00 115 53 4 43 3 3 9 0
.........................................................................................TAGCACCACATGATTCGGCTTG.................................................. 22 1 1 112.00 112 72 3 31 2 4 0 0
.........................................................................................TAGCACCACATGATTCGGCTTAAA................................................ 24 3 1 108.00 108 103 4 1 0 0 0 0
.........................................................................................TAGCACCAAATGATTCGGCTT................................................... 21 1 1 97.00 97 77 7 13 0 0 0 0
.........................................................................................TAGCACCACATGATTTGGCTT................................................... 21 1 1 96.00 96 73 21 1 0 1 0 0
........................................................................................CTAGCACCACATGATTCGGCTT................................................... 22 1 1 90.00 90 40 23 24 0 2 1 0
.........................................................................................CAGCACCACATGATTCGGCTT................................................... 21 1 1 79.00 79 42 25 3 6 1 2 0
.........................................................................................TAGCACCACATTATTCGGCTT................................................... 21 1 1 77.00 77 33 1 41 1 0 1 0
.........................................................................................TAGCACCACATGATTCGGCTTTT................................................. 23 2 1 76.00 76 60 3 5 4 3 1 0
.........................................................................................TTGCACCACATGATTCGGCTT................................................... 21 1 1 75.00 75 14 61 0 0 0 0 0
.........................................................................................AAGCACCACATGATTCGGCTT................................................... 21 1 1 72.00 72 45 24 1 1 1 0 0
.........................................................................................GAGCACCACATGATTCGGCTT................................................... 21 1 1 71.00 71 33 33 2 2 0 1 0
.........................................................................................TAGCACCACATGATTCGTCTT................................................... 21 1 1 71.00 71 35 5 22 3 3 3 0
..........................................................................................AGCACCACATGATTCGGCT.................................................... 19 0 1 66.00 66 64 1 1 0 0 0 0
.........................................................................................TAGCACCACATGATTCGCCTT................................................... 21 1 1 64.00 64 53 1 6 3 1 0 0
..................................................GCCCGAATTATGTGGGAGCTG.......................................................................................... 21 0 1 64.00 64 43 2 9 8 1 1 0
.........................................................................................TAGCACCACATGATTCGGCC.................................................... 20 1 1 59.00 59 0 57 1 1 0 0 0
..........................................................................................AGCACCACATGATTCGGCTTT.................................................. 21 1 1 58.00 58 57 0 0 0 1 0 0
...........................................................................................GCACCACATGATTCGGCTT................................................... 19 0 1 56.00 56 48 4 1 2 0 1 0
.........................................................................................TAACACCACATGATTCGGCTT................................................... 21 1 1 51.00 51 26 7 14 1 1 2 0
.........................................................................................TAGCACCACATGATTCGGCGT................................................... 21 1 1 47.00 47 43 1 0 1 2 0 0
.........................................................................................TAGCACCACATGATTCGGCTTAT................................................. 23 2 1 47.00 47 43 0 2 1 1 0 0
.........................................................................................TAGCACCCCATGATTCGGCTT................................................... 21 1 1 47.00 47 10 34 1 0 1 1 0
.........................................................................................TAGCACCACATGCTTCGGCTT................................................... 21 1 1 47.00 47 1 27 1 3 13 2 0
.........................................................................................TAGCATCACATGATTCGGCTT................................................... 21 1 1 45.00 45 31 7 6 1 0 0 0
...................................................CCCGAATTATGTGGGAGCTGCG........................................................................................ 22 0 1 40.00 40 15 1 12 8 3 1 0
.........................................................................................TAGCACCACATGATTCGGATT................................................... 21 1 1 38.00 38 4 0 31 1 1 1 0
.........................................................................................TAGCACCACATGATTCGG...................................................... 18 0 1 38.00 38 7 0 27 2 2 0 0
.........................................................................................TAGCACCACATGATTCGACTT................................................... 21 1 1 37.00 37 21 5 5 3 0 3 0
........................................................................................GTAGCACCACATGATTCGGCTT................................................... 22 0 1 32.00 32 32 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCCT................................................... 21 1 1 32.00 32 6 11 5 2 4 4 0
.........................................................................................TAGCACTACATGATTCGGCTT................................................... 21 1 1 32.00 32 20 4 5 0 2 1 0
.........................................................................................TAGCACCACATGATTAGGCTT................................................... 21 1 1 32.00 32 2 0 29 0 0 0 1
.........................................................................................TAGCACCACATCATTCGGCTT................................................... 21 1 1 32.00 32 15 6 5 1 0 5 0
.........................................................................................TACCACCACATGATTCGGCT.................................................... 20 1 1 30.00 30 9 19 1 0 0 1 0
.........................................................................................TAGCACCACACGATTCGGCTT................................................... 21 1 1 28.00 28 22 2 2 1 1 0 0
.........................................................................................TAGCACCACGTGATTCGGCTT................................................... 21 1 1 28.00 28 15 2 2 4 4 1 0
.........................................................................................TAGCACCACATGATTCAGCTT................................................... 21 1 1 26.00 26 11 2 4 2 4 3 0
..................................................GCCCGAATTATGTGGGAGCTGCGT....................................................................................... 24 1 1 26.00 26 6 0 3 7 1 0 9
.........................................................................................TAGCACCACATGATTCGGGTT................................................... 21 1 1 25.00 25 24 1 0 0 0 0 0
.........................................................................................TAGCGCCACATGATTCGGCTT................................................... 21 1 1 25.00 25 14 3 5 2 1 0 0
.........................................................................................TAGCACCACATGATCCGGCTT................................................... 21 1 1 25.00 25 13 5 2 2 3 0 0
.........................................................................................TAGCACCACATGGTTCGGCTT................................................... 21 1 1 23.00 23 15 2 4 1 1 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTA................................................. 23 2 1 23.00 23 16 3 1 3 0 0 0
.........................................................................................TAGCAACACATGATTCGGCTT................................................... 21 1 1 22.00 22 14 0 8 0 0 0 0
.........................................................................................TAGCACCACATGATTCTGCT.................................................... 20 1 1 21.00 21 5 0 15 0 0 1 0
........................................................................................TTAGCACCACATGATTCGGCTT................................................... 22 1 1 20.00 20 20 0 0 0 0 0 0
.........................................................................................TAGCACCGCATGATTCGGCTT................................................... 21 1 1 20.00 20 10 3 4 2 0 0 1
.........................................................................................TGGCACCACATGATTCGGCTC................................................... 21 2 1 19.00 19 0 19 0 0 0 0 0
.........................................................................................TAGCACCACATAATTCGGCTT................................................... 21 1 1 19.00 19 12 3 2 0 1 1 0
.........................................................................................TAGCACCATATGATTCGGCTT................................................... 21 1 1 19.00 19 8 4 7 0 0 0 0
.........................................................................................TACCACCACATGATTCGGCTC................................................... 21 2 1 18.00 18 0 18 0 0 0 0 0
..........................................................................................TACACCACATGATTCGGCTT................................................... 20 2 1 18.00 18 16 0 2 0 0 0 0
.........................................................................................TAGCACCACATGAGTCGGCTT................................................... 21 1 1 17.00 17 14 1 0 0 0 0 2
..........................................................................................AGCACCACATGATTCGGCTTA.................................................. 21 1 1 16.00 16 16 0 0 0 0 0 0
........................................................................................ATAGCACCACATGATTCGGCTT................................................... 22 1 1 16.00 16 16 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGTTT................................................... 21 1 1 16.00 16 10 2 2 0 2 0 0
.........................................................................................TAGCACCACATGACTCGGCTT................................................... 21 1 1 16.00 16 12 2 1 0 1 0 0
.........................................................................................TAGAACCACATGATTCGGCT.................................................... 20 1 1 16.00 16 9 0 6 0 0 1 0
.........................................................................................TAGCAGCACATGATTCGGCTT................................................... 21 1 1 15.00 15 2 11 0 1 0 1 0
.........................................................................................TAGCCCCACATGATTCGGCTT................................................... 21 1 1 15.00 15 9 0 5 0 0 1 0
.........................................................................................TAGCACCACATGATGCGGCTT................................................... 21 1 1 15.00 15 13 1 0 0 0 1 0
.........................................................................................TAGTACCACATGATTCGGCT.................................................... 20 1 1 15.00 15 0 15 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTCAT................................................ 24 1 1 14.00 14 0 0 0 0 0 0 14
.........................................................................................TACTACCACATGATTCGGCTT................................................... 21 2 1 14.00 14 0 14 0 0 0 0 0
.........................................................................................TAGTACCACATGATTCGGCTC................................................... 21 2 1 14.00 14 0 14 0 0 0 0 0
.........................................................................................TGGCACCACATGATTCGGCT.................................................... 20 1 1 14.00 14 2 8 3 1 0 0 0
.........................................................................................TAGCACCACATGATACGGCTT................................................... 21 1 1 13.00 13 6 3 1 0 2 1 0
.........................................................................................TAGCACAACATGATTCGGCT.................................................... 20 1 1 13.00 13 8 0 5 0 0 0 0
...........................................................................................TCACCACATGATTCGGCTT................................................... 19 1 1 13.00 13 10 0 3 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTGT.................................................. 22 2 1 12.00 12 10 1 0 0 1 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTG................................................. 23 1 1 12.00 12 11 0 0 1 0 0 0
...................................................CCCGAATTATGTGGGAGCTGC......................................................................................... 21 0 1 12.00 12 1 1 6 3 0 1 0
.........................................................................................TACCACCCCATGATTCGGCTT................................................... 21 2 1 11.00 11 0 11 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCCGCTT................................................... 21 1 1 11.00 11 7 0 2 0 1 1 0
.........................................................................................TAGCACGACATGATTCGGCTT................................................... 21 1 1 11.00 11 2 8 1 0 0 0 0
.........................................................................................TATCACCACATGATTCGGCT.................................................... 20 1 1 11.00 11 0 0 7 4 0 0 0
..........................................................................................ATCACCACATGATTCGGCTT................................................... 20 1 1 10.00 10 6 4 0 0 0 0 0
.........................................................................................TAGAACCACATGATTCGGCTTT.................................................. 22 2 1 10.00 10 9 0 1 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTAA.................................................. 22 2 1 10.00 10 10 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTAA................................................ 24 3 1 9.00 9 9 0 0 0 0 0 0
..........................................................................................AGCACCACATGATTCGGATT................................................... 20 1 1 9.00 9 9 0 0 0 0 0 0
.........................................................................................TAGCACCACTTGATTCGGCTT................................................... 21 1 1 9.00 9 5 4 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTGT................................................. 23 2 1 9.00 9 8 0 0 1 0 0 0
.........................................................................................TAGCACCACAAGATTCGGCTT................................................... 21 1 1 9.00 9 4 4 1 0 0 0 0
.........................................................................................TAGCACCACCTGATTCGGCTT................................................... 21 1 1 9.00 9 0 0 2 0 4 3 0
.........................................................................................TAGCACCACATTATTCGGCT.................................................... 20 1 1 9.00 9 2 0 7 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTCT................................................. 23 1 1 9.00 9 6 0 1 1 0 1 0
.........................................................................................TAGCTCCACATGATTCGGCTT................................................... 21 1 1 8.00 8 0 6 1 0 1 0 0
.........................................................................................TAGCACCACATGATTTGGCTG................................................... 21 2 1 8.00 8 6 2 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGCTT.................................................... 20 2 1 8.00 8 7 0 1 0 0 0 0
.........................................................................................TGGCACCACATGATTCGGCTTT.................................................. 22 2 1 8.00 8 1 5 2 0 0 0 0
.........................................................................................TAGCACCACATGTTTCGGCTT................................................... 21 1 1 8.00 8 3 1 1 0 3 0 0
.........................................................................................TAGTACCACATGATTCGGCTTT.................................................. 22 2 1 7.00 7 2 5 0 0 0 0 0
.........................................................................................TAGCAACACATGATTCGGCT.................................................... 20 1 1 7.00 7 2 0 5 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTTT................................................ 24 2 1 7.00 7 6 0 1 0 0 0 0
............................................................................................CACCACATGATTCGGCTT................................................... 18 0 1 7.00 7 6 0 1 0 0 0 0
.........................................................................................TAGCACCACATTATTCGGCTG................................................... 21 2 1 7.00 7 4 0 0 0 0 3 0
.........................................................................................TGGTACCACATGATTCGGCTT................................................... 21 2 1 7.00 7 0 7 0 0 0 0 0
.........................................................................................TAGCACCAAATGATTCGGCT.................................................... 20 1 1 7.00 7 3 0 4 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGAT.................................................... 20 1 1 7.00 7 0 0 7 0 0 0 0
.........................................................................................TACCACCACATGATTCGGCTTT.................................................. 22 2 1 7.00 7 2 5 0 0 0 0 0
.........................................................................................TAGAATCACATGATTCGGCTT................................................... 21 2 1 7.00 7 7 0 0 0 0 0 0
.........................................................................................TAGCACCCCATGATTCTGCTT................................................... 21 2 1 7.00 7 0 7 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGTCT.................................................... 20 1 1 7.00 7 3 0 3 0 0 1 0
.........................................................................................GAGCACCACATGATTCGGCT.................................................... 20 1 1 7.00 7 1 2 2 2 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTCA................................................. 23 1 1 7.00 7 4 0 2 1 0 0 0
.........................................................................................TAGAACAACATGATTCGGCTT................................................... 21 2 1 7.00 7 5 0 2 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTC................................................. 23 2 1 6.00 6 6 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCAGCT.................................................... 20 1 1 6.00 6 5 0 1 0 0 0 0
.........................................................................................TAGCACCCCATGCTTCGGCTT................................................... 21 2 1 6.00 6 0 6 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTAT.................................................. 22 2 1 6.00 6 6 0 0 0 0 0 0
.........................................................................................TACCACCACATGATTCGGCTG................................................... 21 2 1 6.00 6 1 5 0 0 0 0 0
.........................................................................................TAGCACCACATGATTGGGCTT................................................... 21 1 1 6.00 6 3 2 0 0 0 1 0
.........................................................................................TAGCACCACATGATTTGGCT.................................................... 20 1 1 6.00 6 4 2 0 0 0 0 0
.........................................................................................TATCACCACATGATTCGGCTTT.................................................. 22 2 1 6.00 6 6 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTAGGCT.................................................... 20 1 1 6.00 6 0 0 6 0 0 0 0
..........................................................................................AGCACCCCATGATTCGGCTT................................................... 20 1 1 6.00 6 6 0 0 0 0 0 0
.........................................................................................TAGGACCACATGATTCGGCTT................................................... 21 1 1 6.00 6 5 0 1 0 0 0 0
..........................................................................................AGCACCACATGATTCGGCTTAAA................................................ 23 3 1 6.00 6 6 0 0 0 0 0 0
..........................................................................................AGCCCCACATGATTCGGCTT................................................... 20 1 1 6.00 6 6 0 0 0 0 0 0
..........................................................................................TGCACCACATGATTCGGCTT................................................... 20 1 1 5.00 5 4 1 0 0 0 0 0
...................................................CCCGAATTATGTGGGAGCTG.......................................................................................... 20 0 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................TAGTACGACATGATTCGGCTT................................................... 21 2 1 5.00 5 0 5 0 0 0 0 0
.........................................................................................TAGCACCTCATGATTCGGCTT................................................... 21 1 1 5.00 5 2 0 2 0 1 0 0
.........................................................................................TAGCATCACATGATTCGGCT.................................................... 20 1 1 5.00 5 3 0 2 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGTT.................................................... 20 1 1 5.00 5 3 0 2 0 0 0 0
.........................................................................................TAGCACCACATGAATCGGCTT................................................... 21 1 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................TTGCACCACATGATTCGGCTC................................................... 21 2 1 5.00 5 0 5 0 0 0 0 0
.........................................................................................TATCACCACATGATTCGGCTTA.................................................. 22 2 1 5.00 5 4 0 1 0 0 0 0
.........................................................................................TAGCACCCCATGATTCGGCT.................................................... 20 1 1 5.00 5 0 4 0 0 1 0 0
.........................................................................................CAGCACCACATGATTCGGCT.................................................... 20 1 1 5.00 5 2 1 1 0 1 0 0
.........................................................................................TAGCGCCACATGATTCGGCT.................................................... 20 1 1 5.00 5 1 1 1 0 1 1 0
..........................................................................................AGCACCACATGATTCTGCTT................................................... 20 1 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCGG................................................... 21 2 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................TAGCACCAAATGATTCGGCTTT.................................................. 22 2 2 4.50 9 7 0 1 0 1 0 0
.........................................................................................TTGCACCACATGATTCGGCT.................................................... 20 1 1 4.00 4 1 3 0 0 0 0 0
..................................................GCCCGAATTATGTGGGAGCTTCG........................................................................................ 23 1 1 4.00 4 1 0 0 1 2 0 0
.........................................................................................TAGCACCACATGATTCGACT.................................................... 20 1 1 4.00 4 2 1 1 0 0 0 0
..................................................GCCCGAATTATGTGGGAGCTGA......................................................................................... 22 1 1 4.00 4 1 1 2 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTGC.................................................. 22 1 1 4.00 4 0 2 0 0 0 2 0
.........................................................................................TAGCACCACATGATTCGGCTTCG................................................. 23 0 1 4.00 4 0 1 3 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTAC................................................. 23 2 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................TAGCACAACATGATTCGGCTTT.................................................. 22 2 1 4.00 4 3 0 1 0 0 0 0
.........................................................................................TACCACCAAATGATTCGGCTT................................................... 21 2 1 4.00 4 1 3 0 0 0 0 0
...................................................CCCGAATTATGTGGGAGCTGCGC....................................................................................... 23 0 1 4.00 4 1 3 0 0 0 0 0
..................................................GCCAGAATTATGTGGGAGCTGCG........................................................................................ 23 1 1 4.00 4 1 0 3 0 0 0 0
.........................................................................................TAGAACCACATGATTCGACTT................................................... 21 2 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGTCTTT.................................................. 22 2 1 4.00 4 1 1 2 0 0 0 0
.........................................................................................TAGCACCACATGATTTGGCTTT.................................................. 22 2 1 4.00 4 3 1 0 0 0 0 0
..........................................................................................AGCACCACATGATTCGGCTTAA................................................. 22 2 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................TAACACCACATGATTCGGCT.................................................... 20 1 1 4.00 4 2 0 1 0 0 1 0
..........................................................................................AGCACCACATGATTCGGCTA................................................... 20 1 1 4.00 4 4 0 0 0 0 0 0
.......................................................................................TCTAGCACCACATGATTCGGCTT................................................... 23 2 1 4.00 4 0 2 1 1 0 0 0
.........................................................................................TAGTACCCCATGATTCGGCTT................................................... 21 2 1 4.00 4 0 4 0 0 0 0 0
..................................................GCCCGAATTATGTGTGAGCTGC......................................................................................... 22 1 1 4.00 4 0 0 4 0 0 0 0
.........................................................................................TATAACCACATGATTCGGCTT................................................... 21 2 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................TAGCACCAAATGATTCGGCGT................................................... 21 2 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................AACACCACATGATTCGGCTT................................................... 20 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................CAGCACCACATGATTCGGCTTT.................................................. 22 2 1 4.00 4 1 3 0 0 0 0 0
..........................................................................................AGCACCACATGTTTCGGCTT................................................... 20 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................TAGAACCACATGATTCTGCTT................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCA.................................................... 20 1 1 3.00 3 1 0 0 1 0 1 0
.........................................................................................TAGCACCACATGATTCGGATTT.................................................. 22 2 1 3.00 3 0 0 2 1 0 0 0
.........................................................................................TAGCACTACATGATTCGGCT.................................................... 20 1 1 3.00 3 1 0 2 0 0 0 0
.........................................................................................TAGCACCAAAAGATTCGGCTT................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................AAGCACCACATGATTCGGCT.................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACCACATGGTTCGGCT.................................................... 20 1 1 3.00 3 0 0 2 1 0 0 0
.........................................................................................TAGCACCACATGATTCTGCTTAA................................................. 23 3 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TTGCACCACATGATTCGGCTTT.................................................. 22 2 1 3.00 3 2 1 0 0 0 0 0
.........................................................................................TAGCACCACAGGATTCGGCTT................................................... 21 1 1 3.00 3 2 0 0 0 0 1 0
..................................................GCCCGAATTATGTGGGAGCTGCGTT...................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................GCTAGCACCACATGATTCGGCTT................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTCAA................................................ 24 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................AGCACTACATGATTCGGCTT................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTAAA................................................. 23 3 1 3.00 3 3 0 0 0 0 0 0
..................................................GCCCGAATTATGTTGGAGCTGCG........................................................................................ 23 1 1 3.00 3 0 0 3 0 0 0 0
.........................................................................................TAGCACCACATGATTCGTCTG................................................... 21 2 1 3.00 3 1 1 0 0 0 1 0
.........................................................................................TAGCACCACATGATTCTGCTTT.................................................. 22 2 1 3.00 3 1 0 2 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCAA................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TACCACCACATGCTTCGGCTT................................................... 21 2 1 3.00 3 0 3 0 0 0 0 0
........................................................................................CTAGCACCACATGATTCGGCT.................................................... 21 1 1 3.00 3 1 0 2 0 0 0 0
..........................................................................................AGCACCACATGATTCGGCTTTT................................................. 22 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................CAGCACCACATGATTCGGCTG................................................... 21 2 1 3.00 3 0 2 0 0 0 1 0
.........................................................................................TAGCACAACATGATTCGGCTTA.................................................. 22 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACCAGATGATTCGGCTT................................................... 21 1 1 3.00 3 1 0 2 0 0 0 0
..................................................TCCCGAATTATGTGGGAGCTGC......................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTAG................................................ 24 3 1 3.00 3 2 0 0 1 0 0 0
..........................................................................................AGCACCACATGATTCGGCTG................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
..................................................GCCCGAATTATGTTGGAGCTGC......................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0
.........................................................................................TAGCACCACATGATTAGGCTTA.................................................. 22 2 1 3.00 3 0 0 2 0 1 0 0
.........................................................................................TAGCACCACATGCTTCGGCT.................................................... 20 1 1 3.00 3 0 0 1 0 2 0 0
..........................................................................................AGCAACACATGATTCGGCTT................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACCACATTATTCGGCTTT.................................................. 22 2 1 3.00 3 2 0 1 0 0 0 0
.........................................................................................TATCACAACATGATTCGGCTT................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................TAGCACAACATGATTCGGCTTG.................................................. 22 2 1 3.00 3 0 0 3 0 0 0 0
.........................................................................................TAGCACCACATGATTCTGCTG................................................... 21 2 2 2.50 5 3 1 0 0 0 1 0
.........................................................................................TAGAACCACATGATTCGGCTTA.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................AGCACCACATGATTCGGCTTC.................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TACCACCACATGATTCCGCTT................................................... 21 2 1 2.00 2 1 0 0 0 0 1 0
.........................................................................................TAGCACCACATGATTCGGCTAC.................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGGACCACATGATTCGGCT.................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0
.........................................................................................TAGTACCACATGATTCGGCTG................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TACCACCACATGATTCGGCTTC.................................................. 22 1 1 2.00 2 0 2 0 0 0 0 0
..................................................GCCCGAATTATGTGGGAGCTGCT........................................................................................ 23 1 1 2.00 2 0 1 0 1 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTGA................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCCC................................................... 21 2 1 2.00 2 0 1 0 0 0 1 0
.........................................................................................TAGAACCAAATGATTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCAAATGATTCGGCTTA.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGCTTCGGCTG................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TAGCACCACATGAGTCTGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TGGCACCACTTGATTCGGCTT................................................... 21 2 1 2.00 2 0 1 0 0 1 0 0
..................................................GCCCAAATTATGTGGGAGCTGCG........................................................................................ 23 1 1 2.00 2 0 0 1 1 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTGA.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCCCATGATTCGGCTTA.................................................. 22 2 1 2.00 2 1 1 0 0 0 0 0
.........................................................................................TTGTACCACATGATTCGGCTC................................................... 21 3 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTGGT................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACACGATTCGGCGT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATAATTCGGCT.................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0
........................................................................................CGAGCACCACATGATTCGGCTT................................................... 22 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TAGCATCACATGATTCGGCTG................................................... 21 2 1 2.00 2 1 1 0 0 0 0 0
.........................................................................................TACCACGACATGATTCGGCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTCT................................................ 24 2 1 2.00 2 1 0 1 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTAG................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCAAATGATTCTGCTT................................................... 21 2 1 2.00 2 1 0 0 0 0 1 0
..................................................GCCCGAATTATGTGGGAGCTGCGC....................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
....................................................CCGAATTATGTGGGAGCTGCG........................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGCT..................................................... 19 2 1 2.00 2 0 0 2 0 0 0 0
..........................................................................................AGCACCACATGATTCGGCA.................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGTACCACATGATTCGGCC.................................................... 20 2 1 2.00 2 0 2 0 0 0 0 0
........................................................................................TTAGCACCACATGATTCGGCTTT.................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
..................................................GCCCGAATTATGCGGGAGCTGCG........................................................................................ 23 1 1 2.00 2 0 0 2 0 0 0 0
.........................................................................................TGGCACCACATGATTCGGCC.................................................... 20 2 1 2.00 2 0 2 0 0 0 0 0
.......................................................................................AGTAGCACCACATGATTCGGCTT................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................AGCCCCACATGATTCGGCT.................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCCCTTGATTCGGCTT................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TATCACCACATGATTCGACTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................AGCACCACATGATTCGTCTT................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GCCCTAATTATGTGGGAGCTGC......................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0
.........................................................................................AAGAACCACATGATTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCCCCACATGATTCGGCTTT.................................................. 22 2 1 2.00 2 1 0 1 0 0 0 0
.........................................................................................TAGCACCCCATGATTCGGCTTG.................................................. 22 2 1 2.00 2 1 1 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCAGCTG................................................... 21 2 1 2.00 2 0 0 0 0 0 2 0
.........................................................................................TAGCATCACATGATTCGGCTTT.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TGGCACCACATGATTCGGCTTA.................................................. 22 2 1 2.00 2 1 1 0 0 0 0 0
........................................................................................GGAGCACCACATGATTCGGCTT................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
.................................................CGCCCGAATTATGTGGGAGCTGC......................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GCCAGAATTATGTGGGAGCTGC......................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0
.........................................................................................TAGCACCACATGATCCGGCT.................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TATTACCACATGATTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTTGGCTC................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TGGCACCACATGATTCGGCTG................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
..........................................................................................AGCACCACCTGATTCGGCTT................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCGCATGATTCGGCT.................................................... 20 1 1 2.00 2 0 1 1 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCGTT.................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................AACCACCACATGATTCGGCTT................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
..................................................GCCCGAATTATGTGGTAGCTGC......................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GCCCGAATTATGTGTGAGCTGCG........................................................................................ 23 1 1 2.00 2 1 0 1 0 0 0 0
..........................................................................................ACCACCACATGATTCGGCTT................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................TTCGGCTTCGTGGTGCAGGAC...................................... 21 0 1 2.00 2 0 0 0 2 0 0 0
.........................................................................................TAGTACCACATGATTCGGCTTA.................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TATCACCACATGATTCGCCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TATCACCACATGATTCGGCTTTT................................................. 23 3 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................AGCACCACATAATTCGGCTT................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGCCT.................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGCTTTAT................................................ 24 2 1 2.00 2 1 0 0 1 0 0 0
.........................................................................................TAGCACCACATGATTTGGCTTA.................................................. 22 2 1 2.00 2 1 0 1 0 0 0 0
.........................................................................................TAGCACCACATGATTAGGCTTT.................................................. 22 2 1 2.00 2 0 0 2 0 0 0 0
.........................................................................................TAGAACCACATGGTTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCGCTTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCCCATGATTCGGCTC................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TACTACCACATGATTCGGCT.................................................... 20 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................TACCACCACATGATTCTGCTT................................................... 21 2 1 2.00 2 0 1 1 0 0 0 0
.........................................................................................TAGCACCACATGATTCGGTTC................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
..........................................................................................AGCACCACATGATTCGGC..................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0
........................................................................................GTAGCACCACATGATTCGGCTTT.................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................TAGCACCACATGATTCTTCTT................................................... 21 2 2 1.50 3 2 0 0 0 1 0 0
.........................................................................................TAGCACCACATGATTCGCCTTT.................................................. 22 2 2 1.50 3 2 0 1 0 0 0 0
.........................................................................................TAGCACCACATGATTCTT...................................................... 18 2 5 1.40 7 5 0 2 0 0 0 0
.........................................................................................TACCACCACATGATTCGGCC.................................................... 20 2 3 1.33 4 0 4 0 0 0 0 0
.........................................................................................AAGGACCACATGATTCGGCTT................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................GGTAGCACCACATGATTCGGCTT................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0

Anti-sense strand reads

AATAATAGAACCTGCGCAAGGACTGCTTACAGTAAGTGGACGTGGGGCGTCGGGCTTAATACACCCTCGACGCGACAAAAGTCCTAGGCATCGTGGTGTACTAAGCCGAAGCACCACGTCCTGTAGTCGCCAAAAACGATCTGTTGCCAATAGATGTTAAT

************************************..((((((((.((.((((.(((((((((((..(((((((((....)))....)))))).))))))))))))))).)).))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V108

head

 M055

female body

 M057

embryo

 V107

male body
................................................GTCGGGCTTAATACACCCTCGAC.......................................................................................... 23 0 1 2.00 2 0 1 1 0
.................................................TCGGGCTTAGTACACCCTCGAC.......................................................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................GCGTCGTGGTGTGCTAAGCCGA.................................................... 22 2 1 1.00 1 1 0 0 0
.................................................TCGGGCTTAATACACCCTCGA........................................................................................... 21 0 1 1.00 1 1 0 0 0
..........................................................................ACATAAGTACTAGGCAACGT................................................................... 20 3 10 0.10 1 0 1 0 0
..............CGCCAGGACTCATTACAG................................................................................................................................. 18 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4770:5101876-5102036 - der_22 confident TTA---TT-------ATC--T-------------------TGGACGC----GTTCCTGACGAATGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCT-GTTTT------------------CAGGATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACATCAGC--------------GGTTTTTG----------CTAGAC--------AA-----CGGT---------------------TATCTACAA-T--TA
droYak3 3R:5351024-5351188 + dya_10 confident CTA---TT-------ATC--C-------------------TGGACGTTGCCATCCTGGATTAAACTCATTCAC-----------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------TAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACATCAGC--------------AATTTTTG----------GTAGCC--------AA-----TCGT---------------------TATCTACAA-T--TA
droSec2 scaffold_27:174242-174376 - dse_20 confident -------------------------------------------------------------AATGTCGTTCAC-----------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------CGAAGTCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATATCATC--------------GGTTTTTG----------CTAGCC--------AG-----CGGG---------------------TATCCACGA-T--TG
droSim2 3r:4744562-4744697 - dsi-mir-995 Known_mirbase AG----------------------------------------------------------AAATGTCGTTCAC-----------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------CAAAGTCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATATCATC--------------GGTTTTTG----------CTAGCC--------AG-----CCA-----------------------GTCCACGA-T--TG
dm3 chr3R:16561618-16561770 + dme-mir-995 Known_mirbase GAC---AT-------A-----------------------------TT----ATCCTTGACGAATGTCATCCAC-----------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------CGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACAGGATATCATC--------------GGTTTTTG----------CTAGCA--------AA-----CGGG---------------------TAATCACGA-T--TG
droEug1 scf7180000409542:620329-620484 - GTA---GC-------CTC--C-------------------TGGGTGT----GTCCTTGGCGAATGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGCT-GTTTGTGA-TT-----------CTAAATTCCGTAGCACCACATGATTCGGCTTCGTGGAGCAGGACAGCATC--------------AGATTTTC--------------------------------------T-----------------CTTTTAAAA-C--GA
droBia1 scf7180000302402:9398380-9398545 + CTG---AC-------ATC--C-------------------TGGGCGT----GTCCTTGGTGAATGTCAATCAC-----------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGCT-GTTTCTACCTC-----------CCAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAGCATC--------------GCGTGCTC------C-AACTA----------------------CAGC-----------------CAACAGAAA-A--AG
droTak1 scf7180000415409:611539-611699 + CTA---AC-------ATC--C-------------------TGGGCGT----GTCCTTGGCGAATGTCACCCAC-----------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGGGCTGCGCT-GTTTCTGC-CG-----------CCAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAGCATC--------------TAATCTCT------ACAACTA---GA---------------------------------------GTTTAC---T--AT
droEle1 scf7180000491080:437421-437595 + CTG---GC-------ATC--C-------------------TGGGCGT----GCCCTTGGCGAATGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGGATTCTGTGGCGGCTGCGCT-GCTTCTAC-TA-----------TCAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAGCACC--------------GGATTGC-------ATAGTCA---GAGTTACCAA-----TGGT---------------------TATCTTTAT-T--TA
droRho1 scf7180000779659:137855-138014 + T--------------ATA--C-------------------TG---GC----GTCCTGGGCGAATGTCCTTCGC-----------------------------CTGCACCCCGAAGCCCGGATTCTGTGGAGGCTGCGCT-GCTTCTTT-TC-----------TCAAATTCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAGCATC--------------GGCTTCC-------AA----AGCC--------A------CCAT---------------------TACACACAA-TACCT
droFic1 scf7180000453930:227814-227974 - T----------------C--C-------------------TGGACGT----GTCTTTGGCGAGTGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGAGCTGCGCT-GTTTATAC-T------------CCAAAGTCCGTAGCACCACATGATTCGGCTTCGTGGCGCAGGACAGCATC--------------GGCTGTAG----------CCATAA--------AG-----C--C--TA----------------CCCAATATTG-G--CT
droKik1 scf7180000302307:196884-197037 - TCA-------------TC--A-------------------TTGGCGT----GCCCTCGGCAAATGTTTTTCAC-----------------------------CTGCACCACGCAGCCCGGATTCTGTGGGGGCTGCGCT-GTTCCCCT-TT-----------CCGCCATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGCCAGCATC--------------CA-------------------------------------CGGATCGC-----------------CACCCGGAA-T--TA
droAna3 scaffold_13340:13021644-13021802 - dan_14 confident CGA---GC-------ATC--C-------------------TTTAAGT----GTCCTTGACAAATGTCATTCGC-----------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGAGCTGCGCC-GTTCT------------------TTCTATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCATCATC--------------CTGT-TGG-----------CTGAC--------AC-----AAGA---------------------AATTCGCCA-A--AA
droBip1 scf7180000396691:1899365-1899532 - TTACAAGC-------ATC--C-------------------TTTAAGT----GTCCTTGACAAATGTCATTCGC-----------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGGGCTGCGCC-GTTTTTTT--C-----------TGGCTAACCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCATCATC--------------TTGTA--A----------TTTGTC--------AA-----AAGA---------------------AATTCTCCAAA--CA
dp5 2:5900207-5900401 + dps-mir-995 Known_mirbase ATA--TGC-------ATC--CTGGCTGCTG----------ACGCCGC----GTCCTTGACGAATGTCAAACACCTC-GCAGGCTC-TGCAGC--AGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGCT-GTGTT-----C-----------TTAAAAGCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACACCTTC--------------AGTATCC-------A-AGTCG----------------------CATT-----------------CATTAATAC-T--GA
droPer2 scaffold_19:1637026-1637220 + dpe_4 confident ATA--TGC-------ATC--CTGGCTGCTG----------ACGCCGT----GTCCTTGACGAATGTCAAACACCTC-GCAGGCTC-TGCAGC--AGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGCT-GTGTT-----C-----------TTAAAAGCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACACCTTC--------------AGTATCC-------A-AGTCG----------------------CATT-----------------CATTAATAC-T--GA
droWil2 scf2_1100000004921:2305148-2305346 - dwi_4 confident CCG---GC-------ATT--A------CCT----------ATGCCGT----GTCCTTGACGAATGTCAAATTT----TCTGACTCCTGCAACTCATGTAAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGCT-ACAACAAG-AA-----------CT--AAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGTCATC------GTGT-TG-------A-AGACT--T--------A------ATCT---------------------TATCCATAA-T--AA
droVir3 scaffold_13047:12148420-12148634 - dvi-mir-995 Known_mirbase TTA---TTGACACGCATCTGCTGGCAGCTGTGCGGCATCCTTGA--T----GTCCTTGACGAATGTCAAACGGCTTGGCCGGCTC-AACA-----------GCTGTACAACGAAGCCCGGATACTGTGTGTGTTGCGCT-GTTTA-------------------GAGGTACGTAGCACCACATGATTCGGCTTCGTGGTGCACGCA------ACTGCAACAGA--GGGCGTCA-------A---------------------CGG----TATTTATTAATATAGGC----TA-C-GTAC-A--TA
droMoj3 scaffold_6540:29636935-29637129 + dmo_11 confident CGC--CTT-------ATC--C-------------------TTGA--T----GTCCTTGACGAATGTCAAACAGCTTGGCTGGCTT-GGTA-----------GCTGAACTACGAAGCCCGGGTTTTGTGTGTGCCGCGCT-GTTTT--------------------GAGTACGTAGCACCACATGATTCGGCTTGGTAGTACAGGCT------CATTCAACAAATTAGGCATCA-------A---------------------TTT----TATAGATTAATACGTGCCAATTCTATATTA-T--TA
droGri2 scaffold_14830:1051287-1051469 + dgr_7 confident TCG---TT-------ATC--C-------------------CAGA--T----GTCCTTGACGAATGTCAAATG------------------------------CTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGAT----TTGCCATACACATAAATATACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCA------ACTCCATCGCC---AGT--TAGATAGATAA----AT-C--------AATC---AAGA---------------------TATCTAACA-T--AC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TTA---TT-------ATC--T-------------------TGGACGC----GTTCCTGACGAATGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCT-GTTTT------------------CAGGATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACATCAGC--------------GGTTTTTG----------CTAGAC--------AA-----CGGT---------------------TATCTACAA-T--TASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................21144981.004498128559831610005261996455628
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2012879.002879132533891572837850
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................2211529.0015291128954912791660
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................2011301.00130112781210190
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................221580.005804404710234470
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211538.005382221745132140
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................211481.004811245942220
..................................................................................................................GCCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................231177.001774721121220650
..................................................................................................................GCCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................221176.001761415910211070
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................231170.001701531101230
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211150.0015011619203100
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................221122.001227019768120
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191121.001215711406430
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................221112.00112723402310
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................241108.00108103400010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................23176.007660331450
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19166.006664100010
..................................................................................................................GCCCGAATTATGTGGGAGCTG..........................................................................................................................................................................21164.006443211890
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................20159.005905700110
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21158.005857010000
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................19156.005648401210
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23147.004743010120
...................................................................................................................CCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................22140.0040151318120
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18138.003870202270
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22132.003232000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................24126.00266010739
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................23123.002316300310
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................21116.001616000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22112.001210110000
...................................................................................................................CCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................21112.00121101360
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................22110.001010000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................2419.0099000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGT..............................................................................................................2319.0098000100
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................2319.0096001110
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................1817.0076000010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................2317.0074000120
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................2316.0066000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................2216.0066000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAAA.............................................................................................................2316.0066000000
...................................................................................................................CCCGAATTATGTGGGAGCTG..........................................................................................................................................................................2015.0055000000
............................................................................................................................................................................TAGCACCACATGATTCGGCGG................................................................................................................2115.0055000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGA.........................................................................................................................................................................2214.0041100020
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................2314.0040100030
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................2314.0044000000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................2314.0041300000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAA..............................................................................................................2214.0044000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTA................................................................................................................2014.0044000000
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................2013.0031001100
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCAA.............................................................................................................2413.0033000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................2313.0033000000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................2113.0033000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTTT..............................................................................................................2213.0033000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAG.............................................................................................................2413.0032000100
.............................................................................................................................................................................AGCACCACATGATTCGGCTG................................................................................................................2013.0033000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTC...............................................................................................................2112.0022000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCT........................................................................................................................................................................2312.0020100100
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGA..............................................................................................................2312.0022000000
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................2112.0020101000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................2212.0022000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................2412.0022000000
....................................................................................................................CCGAATTATGTGGGAGCTGCG........................................................................................................................................................................2112.0022000000
............................................................................................................................................................................TAGCACCACATGATTCGCT..................................................................................................................1912.0020000020
.............................................................................................................................................................................AGCACCACATGATTCGGCA.................................................................................................................1912.0022000000
.........................................................................................................................................................................................TTCGGCTTCGTGGTGCAGGAC...................................................................................................2112.0020000200
.............................................................................................................................................................................AGCACCACATGATTCGGC..................................................................................................................1812.0022000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTTT...............................................................................................................2312.0022000000
............................................................................................................................................................................TAGCACCACATGATTCTT...................................................................................................................1851.4075000020
droYak3
CTA---TT-------ATC--C-------------------TGGACGTTGCCATCCTGGATTAAACTCATTCAC-----------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------TAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACATCAGC--------------AATTTTTG----------GTAGCC--------AA-----TCGT---------------------TATCTACAA-T--TASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211150883.001508832180516107107850166810971559521361819131
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2117681.0076812837737554700000
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2015921.005921696585420316491115601060
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................2213830.0038305547152376364583142050
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................2211207.001207981818931441070000
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................2011099.001099120197701000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................2011006.00100639039710001010
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211555.00555235131611578800000
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211488.004886064345123400000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................231475.004750393744421240000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................221444.004443233362321020000
..................................................................................................................GCCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................221265.00265020193338920000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................231243.0024315318340110000
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191190.00190452210971311010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................231108.0010817236102110120
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................22181.008123232810510000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................24176.00761254910000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................23165.006513143600110000
..................................................................................................................GCCCGAATTATGTGGGAGCTG..........................................................................................................................................................................21163.00631124313210000
...................................................................................................................CCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................22158.00580242440400020
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21151.0051146400000000
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................19148.00480351102000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22147.00471271900000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23142.00422241410010000
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19138.0038034400000000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................23135.0035032730010010
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................22123.0023171500000000
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................18123.00231121000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................21121.0021401700000000
...................................................................................................................CCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................21120.0020021220130000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22120.0020303041000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................24118.001819800000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................21115.0015013200000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................21114.0014101020100000
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................20114.0014021200000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGG...............................................................................................................22113.001380002300000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................23112.0012021000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................20211.0022201100000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................23110.001003700000000
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18110.001005121010000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................2319.00913500000000
............................................................................................................................................................................TAGCACCACATGATTCGGAC.................................................................................................................2018.00810700000000
............................................................................................................................................................................TAGCACCACATGATTC.....................................................................................................................1618.00800000001070
..................................................................................................................GCCCGAATTATGTGGGAGC............................................................................................................................................................................1918.00800800000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCT........................................................................................................................................................................2318.00800600020000
.............................................................................................................................................................................AGCACCACATGATTCGGCTC................................................................................................................2017.00700700000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................2416.00602200200000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................2116.00612201000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................2316.00631000200000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................2316.00602300100000
............................................................................................................................................................................TAGCACCACATGATTCGGCAC................................................................................................................2115.00501400000000
...................................................................................................................CCCGAATTATGTGGGAGCTG..........................................................................................................................................................................2015.00502300000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCC........................................................................................................................................................................2315.00500500000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCA........................................................................................................................................................................2315.00500410000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGA.......................................................................................................................................................................2414.00401120000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAA..............................................................................................................2214.00404000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................2214.00421000100000
droSec2
-------------------------------------------------------------AATGTCGTTCAC-----------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------CGAAGTCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATATCATC--------------GGTTTTTG----------CTAGCC--------AG-----CGGG---------------------TATCCACGA-T--TGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................21127694.002769415599117372963626
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2011789.001789610115531533
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................221840.0084042766170177
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................201715.00715708061
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................221287.0028715997346
..................................................................................................................GCCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................221177.001771057884
..................................................................................................................GCCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................231166.0016643119319
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211113.00113106322
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211107.001075752223
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................19183.00833221831
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................23169.0069400281
...................................................................................................................CCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................22153.0053153305
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................21150.0050152258
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................22139.0039185106
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................23137.0037177211
..................................................................................................................GCCCGAATTATGTGGGAGCTG..........................................................................................................................................................................21127.002781711
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................22127.002720007
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19125.002525000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21123.002322010
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18122.00228077
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................24121.002114061
...................................................................................................................CCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................21121.00213576
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................23115.00151167
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22115.001514001
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................23115.001510113
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................19114.00149050
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................21113.001313000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23113.00136034
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................20111.00113152
...................................................................................................................CCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................23110.00104321
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................24110.00102224
...................................................................................................................CCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................2318.0082051
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................2218.0085030
...................................................................................................................CCCGAATTATGTGGGAGCTGCGCC-.....................................................................................................................................................................2418.0080053
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................2315.0053110
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................1815.0053011
..................................................................................................................GCCCGAATTATGTGGGAGCTGCA........................................................................................................................................................................2315.0050041
............................................................................................................................................................................TAGCACCACATGATTCGGT..................................................................................................................1914.0042002
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................2314.0041030
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................2314.0041120
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................2414.0043001
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................2214.0044000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.............................................................................................................2413.0031200
................................................................................................................CAGCCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................2413.0030021
............................................................................................................................................................................TAGCACCACATGATTCGGA..................................................................................................................1913.0032100
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGA.......................................................................................................................................................................2413.0030210
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................2313.0033000
...........................................................................................................................................................................GTAGCACCACATGATTCG....................................................................................................................1812.0020020
...................................................................................................................CCCGAATTATGTGGGAGCTGCGA.......................................................................................................................................................................2312.0021001
.............................................................................................................................................................................AGCACCACATGATTCGGCTTG...............................................................................................................2112.0022000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................2112.0020020
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAA..............................................................................................................2212.0022000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................2312.0021001
..................................................................................................................GCCCGAATTATGTGGGAGCTGCAA.......................................................................................................................................................................2412.0021010
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTTT...............................................................................................................2312.0022000
.............................................................................................................................................................................AGCACCACATGATTCGGCTA................................................................................................................2012.0022000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGCC-G....................................................................................................................................................................2512.0021010
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................2012.0021001
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................2212.0021100
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................2112.0021010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTATA.............................................................................................................2411.0010010
...................................................................................................................CCCGAATTATGTGGGAGCTG..........................................................................................................................................................................2011.0011000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................2211.0011000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGTT-.....................................................................................................................................................................2511.0010010
...................................................................................................................CCCGAATTATGTGGGAGCTGCGTT-T....................................................................................................................................................................2511.0010001
............................................................................................................................................................................TAGCACCACATGATTCGGAA.................................................................................................................2011.0010100
................................................................................................................CAGCCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................2511.0010010
........................................................................................................................................................................TCCGTAGCACCACATGATTCGGCTT................................................................................................................2511.0011000
............................................................................................................................................................................TAGCACCACATGATTCGGCTATT..............................................................................................................2311.0010001
...................................................................................................................CCCGAATTATGTGGGAGCTGCGG.......................................................................................................................................................................2311.0010001
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGT..............................................................................................................2311.0010001
..................................................................................................................GCCCGAATTATGTGGGAGCT...........................................................................................................................................................................2011.0011000
......................................................................................................................................................................AGTCCGTAGCACCACATGATTCG....................................................................................................................2311.0010010
............................................................................................................................................................................TAGCACCACATGATTCGTT..................................................................................................................1911.0010001
............................................................................................................................................................................TAGCACCACATGATTCGGAGA................................................................................................................2111.0010100
.............................................................................................................................................................................AGCACCACATGATTCGGCTC................................................................................................................2011.0011000
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................2011.0011000
....................................................................................................................................................................GAAGTCCGTAGCACCACATGATT......................................................................................................................2311.0011000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTCT..............................................................................................................2211.0011000
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................2111.0010010
..................................................................................................................GCCCGAATTATGTGGGAGCTGTT........................................................................................................................................................................2311.0011000
................................................................................................................CAGCCCGAATTATGTGGGAGCTG..........................................................................................................................................................................2311.0010010
droSim2
AG----------------------------------------------------------AAATGTCGTTCAC-----------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------CAAAGTCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATATCATC--------------GGTTTTTG----------CTAGCC--------AG-----CCA-----------------------GTCCACGA-T--TGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211314505.00314505114761552183293454365471670017153248162349917784137221362719103848
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................20126806.00268065200311284119237184177412053022669157223024112010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................2218648.0086488634711067700873753251218213051798176000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................2216254.00625424681725471320025628033737123120801359001
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................2114637.0046373773956763400772235510000
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................2113427.0034275543873234002593177515891038537000
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................1912416.0024163222015381382193112943552543291003000
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2112226.0022261286477924001114121344201000
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................2011117.0011177683231310000111000000
................................................................................................................................................................................ACCACATGATTCGGCTT................................................................................................................171930.00930000000621421887000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................231883.0088330138928004825155143383158000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................241444.0044420912600342513010524322000
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................181417.0041700035210852304425101101000
..................................................................................................................GCCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................221394.0039430200200003374901000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................221385.0038599548141019366149371312000
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................201307.00307901621910459527012009
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................201306.003061641512310000003000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................231281.0028159985006476401172000
..................................................................................................................GCCCGAATTATGTGGGAGCTG..........................................................................................................................................................................211263.002638122010000248001000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................231218.002180007001301015523162100
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................231182.00182006300383263382000000
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................191178.001784182002874141010000
...................................................................................................................CCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................221154.00154200900380130974729000
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................181151.0015139652100121247000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................231133.0013344720200459850524000
............................................................................................................................................................................TAGCACCACATGATTCG....................................................................................................................171125.001250000000100124000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................221118.00118855920033215102000
.................................................................................................................................................................................CCACATGATTCGGCTT................................................................................................................161114.00114000000111121179000000
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................201102.00102414100131644134110000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23198.0098703400108231230226000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................22173.007320192005415165113000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................23160.0060000000101200253100
................................................................................................................................................................................ACCACATGATTCGGCTTT...............................................................................................................18157.00572648000000019000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................23155.005511090131710120010000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22150.0050422200000003001000
............................................................................................................................................................................TAGCACCACATGATT......................................................................................................................15149.0049000000010147000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................23147.00470000008617132100000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22145.00451011440031713010000
................................................................................................................................................................................ACCACATGATTCGGCT.................................................................................................................16143.0043000000003040000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGG...............................................................................................................22138.0038350200000000100000
................................................................................................................................................................................ACCACATGATTCGGCTTA...............................................................................................................18137.00376017000001013000000
............................................................................................................................................................................TAGCACCACATGATTCGGCGG................................................................................................................21134.0034291400000000000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGA.......................................................................................................................................................................24132.0032000200110928000000
..................................................................................................................................................................................CACATGATTCGGCTT................................................................................................................15132.0032000000315320000000
............................................................................................................................................................................TAGCACCACATGATTC.....................................................................................................................16131.0031000000000031000000
..................................................................................................................GCCCGAATTATGTGGGAGCT...........................................................................................................................................................................20128.0028000010105120000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................22126.0026100000305600011000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................23125.0025121620010110010000
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19121.0021100110001403001000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................22121.0021170000000003001000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................24120.002000820010201042000
..................................................................................................................GCCCGAATTATGTGGGAGC............................................................................................................................................................................19119.0019000054000010000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................23119.001921800000132002000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGTA-.....................................................................................................................................................................24118.0018000000000000018000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................21113.001300220001131003000
......................................................................................................................GAATTATGTGGGAGCTGC.........................................................................................................................................................................18112.0012000000000012000000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................23112.001200000050202012000
............................................................................................................................................................................TAGCACCACATGATTCGGCCG................................................................................................................21111.001170300000001000000
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................21111.001180300000000000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCA........................................................................................................................................................................2319.00900010000103022000
..................................................................................................................GCCCGAATTATGTGGGA..............................................................................................................................................................................1719.00900000000009000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGTT-.....................................................................................................................................................................2519.00900000000001008000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................2119.00920100011012100000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGA..............................................................................................................2319.00990000000000000000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGTT-.....................................................................................................................................................................2418.00800000000000008000
............................................................................................................................................................................TAGCACCACATGATTCGGAC.................................................................................................................2018.00840300000001000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGTA-.....................................................................................................................................................................2517.00700000000001006000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................2317.00720100000111001000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGA.......................................................................................................................................................................2317.00700000000200014000
................................................................................................................................................................................ACCACATGATTCGGC..................................................................................................................1516.00600000000015000000
.................................................................................................................................................................................CCACATGATTCGGCTTA...............................................................................................................1716.00600000001212000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTCA...............................................................................................................2216.00600100030110000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTA..............................................................................................................2316.00660000000000000000
............................................................................................................................................................................TAGCACCACATGATTCGGA..................................................................................................................1916.00620000011100010000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGT..............................................................................................................2316.00660000000000000000
..............................................................................................................................................................................GCACCACATGATTCGGCTTA...............................................................................................................2016.00600000000006000000
...................................................................................................................CCCGAATTATGTGGGAGCTTTT........................................................................................................................................................................2216.00600000000000006000
..............................................................................................................................................................................GCACCACATGATTCGGCTTT...............................................................................................................2015.00500000000005000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................2115.00500030000001001000
...................................................................................................................CCCGAATTATGTGGGAGCTG..........................................................................................................................................................................2015.00510120100000000000
...................................................................................................................CCCGAATTATGTGGGAGCTGTT........................................................................................................................................................................2215.00500000000000005000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................2115.00500020010101000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................2415.00500000000003002000
......................................................................................................................GAATTATGTGGGAGCTG..........................................................................................................................................................................1715.00500000000005000000
...................................................................................................................CCCGAATTATGTGGGAGC............................................................................................................................................................................1815.00510001100002000000
...................................................................................................................CCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................2115.00500000010001300000
.............................................................................................................................................................................AGCACCACATGATTCGGC..................................................................................................................1815.00520010200000000000
.................................................................................................................................................................................CCACATGATTCGGCT.................................................................................................................1515.00500000001022000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTATA.............................................................................................................2414.00410000000120000000
..................................................................................................................GCCCGAATTATGTGGGAG.............................................................................................................................................................................1814.00400002000002000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.............................................................................................................2414.00401000000000003000
............................................................................................................................................................................TAGCACCACATGATTCGGCGA................................................................................................................2114.00410000000003000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTCG..............................................................................................................2214.00400400000000000000
.................................................................................................................................................................................CCACATGATTCGGCTA................................................................................................................1614.00400000001102000000
................................................................................................................................................................................ACCACATGATTCGGCTC................................................................................................................1714.00400000000004000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGT.........................................................................................................................................................................2214.00400000000003100000
......................................................................................................................GAATTATGTGGGAGCTGCG........................................................................................................................................................................1914.00400000000004000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCAAA-.....................................................................................................................................................................2513.00300010000002000000
............................................................................................................................................................................TAGCACCACATGATTCGGG..................................................................................................................1913.00310200000000000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTTT...............................................................................................................2313.00310100000000001000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCAA.......................................................................................................................................................................2413.00300030000000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTT..............................................................................................................2313.00330000000000000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTA................................................................................................................2013.00300120000000000000
dm3
GAC---AT-------A-----------------------------TT----ATCCTTGACGAATGTCATCCAC-----------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCC-GTTTC------------------CGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACAGGATATCATC--------------GGTTTTTG----------CTAGCA--------AA-----CGGG---------------------TAATCACGA-T--TGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................2111759696.00175969600109929167263179773614142200955221167101695317696185899039163149175410898972730537245124743092205233032553873393615116372550104024714197518641052904705241141052227067000000000000000006312637851594170172256893722313356277632423310215941342331671568124312812812714591941187638524156128840961220151805252906161432510011931121549379916413231253259422396978202553296628232126980523059064680373837053863516535683043871225343747646275711344681675941427382017492153234620324191015696653864501208902128111813842150136923122383471255055833631691202012276147567781512751084132756209401101262164678020117439331210770363748152701584627564129683631611520612578842425564696865127509119927301762501002040247652698053138395492302593362746412090461348028112375286835343358338451050771127862163598459729051269381851183219585106536862482812090892771727310567115613130669130669635972078657131142259240681737163816492217205513759101915251007285218807586711427740680101725832805777662715052251440140658401190614834136861229140642312215981186232656514398160258645645612885714638213166972879151094311288216730
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................201226177.002261770000341012811211993286400141228122315316174831411457614411912652803442442962044138912981237722243624474982737121692792883000000000000000002742722541577152491201021182202147240162383551222021278944024398905921051316176011951031101200709825025341373214100020031615206617605083483484472492808618232662725236501103226167446047340110822008996425071128687130295107455337163214791355165299978307579340001682162214020009530140359180111855132184411731560457632266321621534376173164466351025342518721000184221129117101476406313517431325245638834725421426945777483447649545334415390224359414081746141610856492049154743235192163205276202003150421272141066322432603112532824161328172506383181151148419982846931624115761609469840221535650247013881347111343922112123172712791994172868559833071743337597117293086190938520
..................................................................................................................GCCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................23166035.006603500002122314101040000003111000180300000226412513302935383041939911605148113800110000000000000000005239282825461373302696010672325062413135520124472031924545120341339311051226901110020301223057000012103088202192871113925522237123345150142175892110015232150108495033310160091726311113495313802161987240202525000002630020140281192103394278291193666146929641198256163276041500000724641013408387209193894632698217582118642722810753475324131255174669792464213221258425267769137413441876411234534126449419339730273946310214932583375261746873151044195418202713086320726271118454148366961544989731958261477624247148414364025326215381343852971
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................22155179.0055179000011974315293101300334660251717300000007405145415810156128302754305483149118432603000000000000000000000160160132985134851428521120193352134017351700263673430735266660711611792646946870631505013217040369610000021070221402781231698487140106871559180230105001003332231901812007588443073532248134217648115102111618829557014425114111582073584150000075171007000342202119298784901112371793733382511119926262691744111001931103122648419312749616511342620124319581931143435220522415292141150550197285459409324179322208970340413543316485366266633431980736634050672485615212531061717633399032849916192499811034450802296261194232534833012246362432919144285392393317455663644911380
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................22136273.003627300001013144002011002002969470126000000017524578545771285840159711731011135854210000000000000000000000011981171972842531583313407509824500462903249988820117938489501150403271619140001410100191631781121128375148667544263111340000046107262110288601110713112016445007248613036211341276002071854000019527250010041201979116292012776216171191589023612204919300192141953210749261376199394251818181462320273577594446245503994622375881164735594327565449864332219313762034241947514923178543941082313719872914833835124863962351043858606391227968195121391070
..................................................................................................................GCCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................22124277.002427700000023210012000000780001310006101060438137961959438729224132531681072890032000000000000000000131248178124469876956615101281820001114010914524121923202132301933000000000000100000130110269244275264142841579415410918196132137100300009013106002000021060101003636132278360101171700000305101000043503328125026981513411516622860111165190212000010903615153147195132153149929828817757191317926118706675292111003418167133682481424360200925013462051115641711064241412631451671302813187634148508101513973779106580421246100921175337263538012210474433814335493046211534559
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................19120313.002031300000000000000541252300292321211518401195111222144028662877651412010433272751484760001151000000000000000007179574701152677002010141000000131424144621101533670001000042552531330000095441435410333332722275175596470030042114162792743012784301610311113931446443164121805533886234319720210144601000875022001025647178140334589401399810547235815811303931390000212123524224787981165881173269120546823556537840893971354226535103142188231841822025164493414230184906511321453146741671385405249693689844482478209856117931313624116275906671112391922526004591012720
..................................................................................................................GCCCGAATTATGTGGGAGCTG..........................................................................................................................................................................2118140.008140000000121000010000002720008000000018821102283210111310312671211202990003400000000000000000068310362619126600200225100000038264235391030316010000000000100000000030761319255482649785244521233413000001208804310000420100013020110121121919200306160000019510022002016564783472371642803623167620010000733205121881111182663020731096128152204918282425134835192101713076778412249413121535141179825196401825016413623112032519217171116211372568101212172558514743550
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................2117732.00773200005112151060516000000722030350000000713330817019741134101310106360000000000000000000000201816122591429176912840511047921006143914192019701143034051010102010010000020020103852276234113981126105220000030843274604101155169401413701296492711004134000003462006000702262311311153122269728381310100078131343901604210306155531311412139831158981278522311665986039101846164674650031087230338901800412840682042067516910861110071595391220260
...................................................................................................................CCCGAATTATGTGGGAGCTGCG........................................................................................................................................................................2217631.00763100000009300212010000300204282240111021131412921133588510000000000000000000000013881101971712174223729322930106149016246051541037537227134041116031010001000110010110000181914831414183915812118300110220217025103051611232623521541623800423396000001100000320001001920112213031132086427734138644730114160000641126230242104633913131119022142335862320813418533161595122014745827136321382023272831410101431613111221914491111115342950261347448181508529178470133185981912681020815111702851150
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................2215642.00564200000000000000010100333200100000000053356012156110415141231000198106530000000000000000010201025098116010022202002200915211960035114074010000010550000500000281212663139100581260000071012226211031043020713009015038154710010140000041100000019992848612649910549171115110047210232010151312129211583333518154321108102031433231131819423835654396832520182131342422618021180511394795411650215134409419251825540191557263114131010711171221500
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................1813506.00350600000000000000002219006804125216430009147131415348111774381000122000000000000000006108804105666000000130000000210191141014031216300000001833014359000008141016581537880378602231171666213337023416951321241045564270624726590030211011031170001002216122350202346113711238132323000088103585203521215317311438710172111187622384644461716926478952412941132397118104982106217843938110112732917203563861451240040042753046990
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................2312799.0027990000208840000300000027000000000000126311493237311206665430000000000000000000000011200842446351016200010117310021200172318290311710250020000100100100000200005264823101241441109179400000100000030000020104010000000342214000341000000836002000101111730199201024151059400700003203042020021000001001010000011014272122815245301141272210100014930001244142369601010126671720000000133102021525050330
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2112786.002786000011201003060000001000017000000001222413810111464100000000000000000000000059421312104553024021100013407181165204200305100010102032000000010002213218121289100000412632617022123241214404536015024262000001000000440000002015712146661236202299247000054400874130020961820115810124831382123161242924147199441912516711273918743524507001059765713508921382132837311313101161819301621500942892119350
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................2011703.00170300001001000000000000010000123100000031104053003002592000063000000000000000000812990303735310300142000330067251514104013171010201000000000000120143321252611120000002901322323280187318418116111250502010020060020060000001004000712841126187042181123285004000032110212600203014203225522012786516462538721293756568312001122521904226190600818126237223181096400301230445320
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................1911443.00144300000000000000000000260000000000000000000310000000001000000000000000000000004223233413179271761162051574001571373965596141132100000000000000010000000000021002111200030000003811201044020001010200003010403015000000000002000100013132123310460030000000011010020600100010101112000021573017342517621663654124104100052001038040221411095052004304200100101010000
...................................................................................................................CCCGAATTATGTGGGAGCTGC.........................................................................................................................................................................2111245.00124500000000000101000000000001000000000210031042110203210200000000000000000000002003030014110002003341000000135170612113500000000000000101000000514109032365210515600000030010020000130200030003001311100000000000001100000010323031647515516130651000031113417401107053319415934255161340933228084210376441111131256001005516531193219221134268195118642916153212136262118121150
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................2111201.00120100001100431102010000010000000000003010162021010362020000000000000000000000005104401011103310010000000000846311002031010000001000100000000000022330121003111000005040025902000312014451640616040301000000000000130000001000362002102031104100000021063361312120110321421117871234133115416392824182450832715011121722202251614521833301262016210100212000200100310240
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................2311195.0011950000000010000200000022000040000000011020047232101110100000000000000000000000551203100045000000012000200122029172601301002100000003021000000000003406102210023100100805101033104000101021400011500115101000708600000410000001045244405781484177008000010210102511102142063202457524126158111081531266383365262795215203270114081781812001312101122421318841131041413026169650
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................2411158.001158000000100000000000001200000000000001431501371230235213000000000000000000000000000026626910000000030000000011100304008001000000000000000010000213117101231126023810000000000000000000000000000000031213000000300000720000000000532019221203036184300020000000101000000000000000010000000000121985641714674600000000060010918631023000000133683000000000000001803020000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................2411035.0010350000000000000000000000000000000000011100100303102001000000000000000000000000040201136896001003021000100196105020000000000000000000100000000000531211475102005000003000203000001203000100301000003000001100000000000000826590180861283712009000010001727110311145531027147553075145126312220212320101325052213151211504663011400110929220215375125112541020811204178713220
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................2011007.0010070000001000000000000012020040000000431105026400009421010000000000000000000000000007000210000000000000000212050001001000000000000100000000000175961222202923000006031400500000010001000007104641117000010000001200000050010310321821614211100001003000111200330010401020321014206111611163211591257671270030234012193171207005241038205112339340000133329164210
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................221901.0090100000000000000000000000102300000000112020340112142223000000000000000000000000110010010021000000000000000030010000120510000120104000100000001020111003020000000000100061603010200122730001205233100010000000025000000000690334474411071030000020001513242114102120254020531133741579127811103775451091011532000006273101901044416410425424400150002029115100
...................................................................................................................CCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................231708.007080000000020000000000000000000000000020000012100102212000010000000000000000000001008247202420010002200100100603301011111000000000000000000000000122102243230200300000000000100000010000100030000000100000040000000000000213110021687219172031430000110112312000010201021011132203110032062124103440530225950050463120501225252258111243111199115032016421080
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................231643.006430000001100000000000001110010000000010000073001005351100000000000000000000000010001212047600021000100000004342302120160020100000001000000000001711093141311433000001001001140000011100040000000291300000100000045000000030310104104542340001000000011003131001101061010120001313252072233623632623210172100014444231100032212242003023241001023200421110
..................................................................................................................GCCCGAATTATGTGGGAGCT...........................................................................................................................................................................201622.0062200000000000000000000000000100000003130110103100100022000000000000000000000000011040300103200000100000000087339131000000000000000000000000000002550011302000200100020000023000000000000003010212000000006000000100000000065340047220120000000002000012000000000001000010016140122352140110614101000001001011110301116034000100110000200010032110
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................231540.00540000000012000000000001211000000000010002100300102311300000000000000000000000011000500411100000112100000001300110100000101000000010000000000002514011211000410000010000006000010010100000010365220004020000002200000003021710478513352000420001001101000100400002002010101000005294274815462141100112000027333200110014221120000004001020310020150
............................................................................................................................................................................TAGCACCACATGATTCGGT..................................................................................................................191464.0046400000000000000001000100002000000000200032160110514420000000000000000000000000000001000000000000000001000001000000000100000000003000000000002211341100030312000000000003901210110038000260120120010010200000000001200101427222711420226320000212103011042041621025143310724145103011300293092333311020000016102410303010002001021211155111525880
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................201455.00455000000000000010000000000001000000030000000000000100000000000000000000000000000000000000300000000000000001120000000000000000000010000100000000200100010001000000220011110000001007742000530302016000000000000000000020100010000000011004000000000301100301000001120000020011329172115205481712131375110101000112142030036001000010070201000000000230
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................181410.00410000000000000000000001200000000000001100100100000100100000000000000000000000047580000000000000000000000001000000000000000000000000000000000203000014241107000000103010110002000012000000124500000200000050000011000000531430000000000700100000410000000000000000002110000022230020862911051409301100106100102013020114034071001301100000301200110
..................................................................................................................GCCCGAATTATGTGGGAGCTGCA........................................................................................................................................................................231392.003920000000110000000000000000000000000010301001112011151000000000000000000000000000009801211000000000000000333100001001500000000000000000000000031274022211010100000000000000000000000000000000000000000000000000000000020031114050512400020000000001000000001200000002000211001181741821429111100200270015158414012002413014150020212060101401015130
............................................................................................................................................................................TAGCACCACATGATTCGGCTTATC.............................................................................................................241371.00371000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027890000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................201365.0036500000000000000000000000010100000003000110030000000000000000000000000000000003001000000000000000000000000102010000100000000000000000100000000010000110001000000000000100000000000021102011101011001000000000000000012035100000000140010000030010000001000100011101000311130244353276431422117100030100056630800670461121101334210000122134140
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGA.......................................................................................................................................................................241327.0032700000000000000000000000000100000000000000100010000000000000000000000000000000000034216020000002000000100601102000102400000000000000000000000004480023200100000000000000010000000001000000000000200000000000000000000030010072337254500210000100020000000102001010010000111231117655521032201000110000101411809000301015251714922000100101313020
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................191255.00255000000000000000000000000061100000000000010000000010000000000000000000000000000200010000010000000000000400143000000000000000000000000000000000000002010000020000000000022000021020143000020440001300000000000000000000000210022020020000000001110000000400111001000001000401048414236192110000000000000004100000002024211000100000000000002000
..................................................................................................................GCCCGAATTATGTGGGAGCTGCT........................................................................................................................................................................231243.002430000000000000000000000000000000000000010010100100121000000000000000000000000000004470211001000000000000703100000000000000000000000000000000022000121200110000003001000000000000000000000000000000000000000100000000210010200101001000000001000341400102002301213110001324212052904160252200001401122001050140012060110001440000100010111120
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................221228.00228000000020000000000001000000000000000120101100000002200000000000000000000000002000507051000000100000000005400000100000000000000000000000000001600100000000000000000000000000010000000000000020200000000000002000000000001001212200000000000200000000000000000000000010001000122322443212000000000310002210160000011314000000000000001101000000
..................................................................................................................GCCCGAATTATGTGGGAGCTGT.........................................................................................................................................................................221210.0021000000000000000000000000000000000001000010000000010210000000000000000000000000100000201210000000100000004311030000000000000000000000000000000121001102000100000002000001001000000000000000000010000001000000100000001021231544436230003000001000104100005010003100011060302000731268010500000011000200125110014065110130000000000000113020
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................231209.0020900000000000000000000100000100000000010010110000120100000000000000000000000000010000001100000000000000000000000000010000000000001000000000000000101011000000000000000000000000000000000010000000000000000002000000003030000012020120000000000010000000001000010000100100000011953722521810000000060000237160300124311002100001000000000001130
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................221204.0020400000000100000000000010001000000000001000000001100110000100000000000000000000001000300010000000000000000010000000000000000000000000000000000010001000000000000100000011000001000020000000010010001000000000000000000011010000000030000000010000120000001000000012000207031031121312061522010000017310200718000023043110211501100010010121140
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGC.......................................................................................................................................................................241196.00196000000000000000000001010000000000001000000000000010000001000000000000000000000000000200000000000000000000400000000000000000000000000000000003200100010030000000008000000000000000010000000000000000000000000000000300120021100001210100000000010000000200000000000000021001050401020020200101300021022405000342940213001724100112101001210
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................231168.001680000000000000000000000000010000000001000112000001110000000000000000000000000100000003000000000000000000000000000000000000000000000000000000002000100000010000000000000000000000000000000000100000000000000000000000001400003000100001000000000000000110000401100000212120121172194300102100300002000101416130000002010101201000000000100130
............................................................................................................................................................................TAGCACCACATGATTCGGA..................................................................................................................191153.001530000000000000000000020000150000000100000024011004550000000000000000000000000020000010000000000000000000000000000000011010000000000000000000021010100000201000000000000100000020002000000000000000000000000010000000023110150011000010000000000210000100150000100010112103010202031103408100020001002100301190000000001000000301000111030
..................................................................................................................GCCCGAATTATGTGGGAGCTGCC........................................................................................................................................................................231152.00152000000000000000000000000000000000000000013100100000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000011100100110010000000180000000000000000000000000000000000000000000000000010000010000000000000000000012100010000020321100000001130312371612012110000111012020220310003020000100133000000000010000
...................................................................................................................CCCGAATTATGTGGGAGCTGCGT.......................................................................................................................................................................231145.001450000000110000000000000000000000000000000001000000201000000000000000000000000110200040001000000100000100300100000100000000000000000000000000011000010102006000000300100140000000100201000000000000000010000000000000101200010005222022000001000000100000201020001010101010100000000000320100001000000022000001011230103414100900100611310
............................................................................................................................................................................TAGCACCACATGATTCGGCTCT...............................................................................................................221130.0013000000000000000000000000000100000001000000000000000100000000000000000000000000000000000001000000100000001000000000000000000000001000000000000000000000000000000001000021000000000000000010110000000000000000000000010101100000000010040000001001001001001100042101110300000036112222031001300002000005431030001110100100000200000000201330
..................................................................................................................GCCCGAATTATGTGGGAGC............................................................................................................................................................................191127.001270000000000000000000000000000000000120001100010000111000000000000000000000000040100000201010000011000000071891000101000000000000000102100000021000121022000000000000000000000000000000000100010000000000000000000000000562800541000000100000000000000000000010100100014110221000000000301000000000100000000010000000000000000000000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................211127.001270000000200110000000011000000000000000110041000011100000000000000000000000000000011400500000100010000000000000002001000000000000000000000000011271000200130000000000000100000000000000000001603000000000000120000000010000020102010000000000000000000000000000000001000001000702415020000000005100101100010010057000000000000000000100000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................231123.0012300000000000000000000000000000000000000100100000000010000442390000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000100000000000000010000000100000001000000230602020010200000000100201000001000003012100300100100001100
..................................................................................................................GCCCGAATTATGTGGGAGCTGCAA.......................................................................................................................................................................241118.00118000000010000000000000000000000000000010100010000000000000000000000000000000000000410030000000001000000000000000000000000000000000000000000001410330000000300000000000000000000000000000000000010000000000000000000000010000010412100000000000000000000000000000000000000000021221836060000000001000011502000000044000000000000002100000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................231116.001160000000000000000000000000000000000000000000000100012000000000000000000000000000100003121000001000000000233000000000000000000000000000000000013000000010300000000000000100000000000010001000030000000000000000000000002311102231400001100000000110000000000000000001020000100217015232000100011000003113000010001000100000000000010011130
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................241116.0011600000020000000000000010000000000000010000422000010000000000000000000000000001001040115000000000300000003010000020000000000000000000000000000100300001000000000000000000000000000000000000000100000010000000000000000001001010200100000000100001000000000000000000000000000103010205100000000200001344700000013104000000001000000000020020
..................................................................................................................GCCCGAATTATGTGGGAGCTGCGCC-.....................................................................................................................................................................251112.0011200000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000020000000000000000010000000000000000000000000000000000000000000020003002002000000000000000000000000000000000000000000000000100000000000400010121601700004243000010800000002200000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................231105.0010500000000000000000000010000000000000000100010110000100000000000000000000000000100000012100000000000000003211000110010000000000000000010000000010000000010000000000000000000000000001000000012000000000000000000000000002000010010000011030011000000000000010000000000000100001925212130010000000001003510000000142000000000000000100000010
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................232103.0020600000000000001000000110000000000001001100000000000001000000000000000000000000000000303000000000000000000000100000000000000000000000000000000130310100000000000000000000000000000000000000002100000000000000400000000000000020100220000000000000000000000000001000000000001051333166101600000000000000325310000001014000000000000001200000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................21196.0096000000000000000000000000010000000000000000100000010000000000000000000000000000000100000000000000000000000200000000000000000000000000000000002050000000000000000000000000000001000000000100020200000000000000000000100100000000000200000000001010000000100000100010000140000021023020022010002000100502020021055201211310030101000011140
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................22187.0087000000000000000000000100000000000000000010001100001100000000000000000000000000000100001100000000000000000000000000000100000000000000000000000100000000000100000000000020000010000000000000301000030000000000000000000060010001000000000000000000000000010000100011000000000191819060010000000000000202000021102000000000000101001110110
droEug1
GTA---GC-------CTC--C-------------------TGGGTGT----GTCCTTGGCGAATGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGCT-GTTTGTGA-TT-----------CTAAATTCCGTAGCACCACATGATTCGGCTTCGTGGAGCAGGACAGCATC--------------AGATTTTC--------------------------------------T-----------------CTTTTAAAA-C--GASizeHit CountTotal NormTotal
No Reads
droBia1
CTG---AC-------ATC--C-------------------TGGGCGT----GTCCTTGGTGAATGTCAATCAC-----------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGCT-GTTTCTACCTC-----------CCAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAGCATC--------------GCGTGCTC------C-AACTA----------------------CAGC-----------------CAACAGAAA-A--AGSizeHit CountTotal NormTotal
No Reads
droTak1
CTA---AC-------ATC--C-------------------TGGGCGT----GTCCTTGGCGAATGTCACCCAC-----------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGGGCTGCGCT-GTTTCTGC-CG-----------CCAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAGCATC--------------TAATCTCT------ACAACTA---GA---------------------------------------GTTTAC---T--ATSizeHit CountTotal NormTotal
No Reads
droEle1
CTG---GC-------ATC--C-------------------TGGGCGT----GCCCTTGGCGAATGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGGATTCTGTGGCGGCTGCGCT-GCTTCTAC-TA-----------TCAAAATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAGCACC--------------GGATTGC-------ATAGTCA---GAGTTACCAA-----TGGT---------------------TATCTTTAT-T--TASizeHit CountTotal NormTotal
No Reads
droRho1
T--------------ATA--C-------------------TG---GC----GTCCTGGGCGAATGTCCTTCGC-----------------------------CTGCACCCCGAAGCCCGGATTCTGTGGAGGCTGCGCT-GCTTCTTT-TC-----------TCAAATTCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAGCATC--------------GGCTTCC-------AA----AGCC--------A------CCAT---------------------TACACACAA-TACCTSizeHit CountTotal NormTotal
No Reads
droFic1
T----------------C--C-------------------TGGACGT----GTCTTTGGCGAGTGTCATTCAC-----------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGAGCTGCGCT-GTTTATAC-T------------CCAAAGTCCGTAGCACCACATGATTCGGCTTCGTGGCGCAGGACAGCATC--------------GGCTGTAG----------CCATAA--------AG-----C--C--TA----------------CCCAATATTG-G--CTSizeHit CountTotal NormTotal
No Reads
droKik1
TCA-------------TC--A-------------------TTGGCGT----GCCCTCGGCAAATGTTTTTCAC-----------------------------CTGCACCACGCAGCCCGGATTCTGTGGGGGCTGCGCT-GTTCCCCT-TT-----------CCGCCATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGCCAGCATC--------------CA-------------------------------------CGGATCGC-----------------CACCCGGAA-T--TASizeHit CountTotal NormTotal
No Reads
droAna3
CGA---GC-------ATC--C-------------------TTTAAGT----GTCCTTGACAAATGTCATTCGC-----------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGAGCTGCGCC-GTTCT------------------TTCTATCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCATCATC--------------CTGT-TGG-----------CTGAC--------AC-----AAGA---------------------AATTCGCCA-A--AASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211113852.0011385216244916411185177014961516
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2019417.00941710166871268250138874
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2116196.006196861667465
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................2214527.00452762134434619441182
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................2212851.00285110826653621417
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................2011624.001624116220100
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................2111591.0015914314783701617
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................2311040.0010404898010002
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................201873.00873774981000
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211766.00766186496558138
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191722.0072215441016192121
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................221496.00496104706721
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................231271.0027164155131614
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................231249.00249112303311
..................................................................................................................GCCCGGATTCTGTGGGAGCTGCG........................................................................................................................................................................231215.0021596422123132
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................221202.002023085425454
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................241188.00188161675000
..................................................................................................................GCCCGGATTCTGTGGGAGCTGC.........................................................................................................................................................................221150.00150274198956
..................................................................................................................GCCCGGATTCTGTGGGAGCTG..........................................................................................................................................................................211128.00128336537515
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................181120.001204123513137
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................20198.00985827103
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................22159.00593551000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................21158.00583541000
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................19154.005424290001
...................................................................................................................CCCGGATTCTGTGGGAGCTGCG........................................................................................................................................................................22154.005424150348
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................24148.00483450000
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19145.00453960000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22138.00383420002
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21137.00373430000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................23131.00315242000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22129.00295211200
...................................................................................................................CCCGGATTCTGTGGGAGCTGC.........................................................................................................................................................................21126.00265603111
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23125.00253170401
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................22116.0016390013
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................23114.00140140000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................23112.00122100000
..................................................................................................................GCCCGGATTCTGTGGGAGCT...........................................................................................................................................................................20112.0012290010
.............................................................................................................................................................................AGCACCACATGATTCGGC..................................................................................................................18111.00111010000
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................21111.00110110000
...................................................................................................................CCCGGATTCTGTGGGAGCTG..........................................................................................................................................................................20110.0010700102
............................................................................................................................................................................TAGCACCACATGATTCGGAC.................................................................................................................20110.00100100000
..................................................................................................................GCCCGGATTCTGTGGGAGCTGCGT.......................................................................................................................................................................2419.009500022
..................................................................................................................GCCCGGATTCTGTGGGAGCTGT.........................................................................................................................................................................2219.009240111
............................................................................................................................................................................TAGCACCACATGATTCGGT..................................................................................................................1918.008210212
..................................................................................................................GCCCGGATTCTGTGGGAGCTGCAA.......................................................................................................................................................................2417.007250000
..................................................................................................................GCCCGGATTCTGTGGGAGC............................................................................................................................................................................1917.007070000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.............................................................................................................2417.007060100
.............................................................................................................................................................................AGCACCACATGATTCGGCTG................................................................................................................2016.006600000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................2116.006420000
.............................................................................................................................................................................AGCACCACATGATTCGGCTC................................................................................................................2016.006060000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAA..............................................................................................................2216.006330000
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................1816.006330000
..................................................................................................................GCCCGGATTCTGTGGGAGCTGCA........................................................................................................................................................................2316.006060000
..............................................................................................................................................................................GCACCACATGATTCGGCTTT...............................................................................................................2016.006310110
............................................................................................................................................................................TAGCACCACATGATTCGGA..................................................................................................................1916.006010023
..............................................................................................................................................................................GCACCACATGATTCGGCT.................................................................................................................1815.005230000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTG...............................................................................................................2115.005310001
..................................................................................................................GCCCGGATTCTGTGGGAGCTGCGA.......................................................................................................................................................................2415.005050000
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................2015.005131000
droBip1
TTACAAGC-------ATC--C-------------------TTTAAGT----GTCCTTGACAAATGTCATTCGC-----------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGGGCTGCGCC-GTTTTTTT--C-----------TGGCTAACCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCATCATC--------------TTGTA--A----------TTTGTC--------AA-----AAGA---------------------AATTCTCCAAA--CASizeHit CountTotal NormTotal
No Reads
dp5
ATA--TGC-------ATC--CTGGCTGCTG----------ACGCCGC----GTCCTTGACGAATGTCAAACACCTC-GCAGGCTC-TGCAGC--AGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGCT-GTGTT-----C-----------TTAAAAGCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACACCTTC--------------AGTATCC-------A-AGTCG----------------------CATT-----------------CATTAATAC-T--GASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211124101.0012410154078973786496774780340031115277123213
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................2216796.00679685522425137594376283553320
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2016695.00669544492555048316932616217514
.............................................................................................................................................................................AGCACCACATGATTCGGCTG................................................................................................................2015429.0054291541165420000
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................2112052.002052261102679107753719520
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................221546.0054615405323314317720
..................................................................................................................GCCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................211528.00528345751168184151
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................231526.005261251771096319131028
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211519.0051984393871863000
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191518.005181421914498141202114
............................................................................................................................................................................TAGCACCACATGATTCGGCTGC...............................................................................................................221464.00464131889410445180200
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTT..............................................................................................................231400.00400183216182720170
.............................................................................................................................................................................AGCACCACATGATTCGGCTGT...............................................................................................................211365.00365036201000011
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................191274.00274027301000000
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................201199.001992110293010000
..............................................................................................................................................................................GCACCACATGATTCGGCTG................................................................................................................191198.00198119500110000
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................211184.0018431512722962000
..................................................................................................................GCCCGGATTCTGTGTGTGCTGC.........................................................................................................................................................................221165.00165110616111333426
............................................................................................................................................................................TAGCACCACATGATTCGGCTGG...............................................................................................................221154.0015420782129210210
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................221127.001271763111251000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTG................................................................................................................221122.00122012200000000
..................................................................................................................GCCCGGATTCTGTGTGTGCT...........................................................................................................................................................................20186.008617310541010
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTAA.............................................................................................................24178.007807331010000
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18177.007703311101415021
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTA..............................................................................................................23159.005934353001400
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................20157.005704921300200
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................20157.005705601000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGAA..............................................................................................................23150.005013583000300
...............................................................................................................................................................................CACCACATGATTCGGCTG................................................................................................................18149.004903200476000
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................21138.003813430000000
...................................................................................................................CCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................20138.003803800000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGAAA.............................................................................................................24136.003613220100000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTC..............................................................................................................23130.00306715035030
.............................................................................................................................................................................AGCACCACATGATTCGGCTA................................................................................................................20128.002802800000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGTT..............................................................................................................22126.002602600000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGA...............................................................................................................21125.002502401000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................22124.002401461101001
...................................................................................................................CCCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................22122.002201900010002
..................................................................................................................GCCCGGATTCTGTGTGTGCTA..........................................................................................................................................................................21118.001801710000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................22116.001601330000000
..................................................................................................................GCCCGGATTCTGTGTGTGC............................................................................................................................................................................19116.001601021020010
..................................................................................................................GCCCGGATTCTGTGTGTGCTGT.........................................................................................................................................................................22115.001501110002010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................23114.00140922010000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGC...............................................................................................................21113.001301300000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTTA.............................................................................................................24112.00121830000000
..............................................................................................................................................................................GCACCACATGATTCGGCTGT...............................................................................................................20112.001201110000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTCC.............................................................................................................2419.0095002011000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................2319.0090440100000
...................................................................................................................CCCGGATTCTGTGTGTGCTGC.........................................................................................................................................................................2119.0090900000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................2118.0080800000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................2318.0080700001000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGGT..............................................................................................................2318.0080000240200
............................................................................................................................................................................TAGCACCACATGATTCGGT..................................................................................................................1917.0070700000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCA..............................................................................................................2317.0070110311000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCT..............................................................................................................2317.0070000511000
.............................................................................................................................................................................AGCACCACATGATTCGGCTAA...............................................................................................................2117.0070700000000
...................................................................................................................CCCGGATTCTGTGTGTGCT...........................................................................................................................................................................1917.0070700000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................2116.0060600000000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTGT...............................................................................................................2316.0060600000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................2215.0050410000000
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCGC.......................................................................................................................................................................2415.0050400000010
..................................................................................................................GCCCGGATTCTGTGTGTGCTT..........................................................................................................................................................................2115.0050400010000
..................................................................................................................GCCCGGATTCTGTGTGTGCTGA.........................................................................................................................................................................2215.0050210000110
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCGT.......................................................................................................................................................................2414.0040400000000
.............................................................................................................................................................................AGCACCACATGATTCGGC..................................................................................................................1814.0040400000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGAA..............................................................................................................2214.0040400000000
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCC........................................................................................................................................................................2314.0040030010000
.............................................................................................................................................................................AGCACCACATGATTCGGCAA................................................................................................................2014.0040400000000
...............................................................................................................................................................................CACCACATGATTCGGCTGT...............................................................................................................1914.0040400000000
..............................................................................................................................................................................GCACCACATGATTCGGCT.................................................................................................................1814.0040400000000
............................................................................................................................................................................TAGCACCACATGATTCGGCAC................................................................................................................2114.0040220000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGG...............................................................................................................2114.0040400000000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGTA..............................................................................................................2223.5070700000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGGC..............................................................................................................2313.0030200010000
................................................................................................................................................................................ACCACATGATTCGGCTGT...............................................................................................................1813.0031200000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCTG.............................................................................................................2413.0030100020000
.............................................................................................................................................................................AGCACCACATGATTCGGCA.................................................................................................................1913.0030300000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................2213.0030210000000
............................................................................................................................................................................TAGCACCACATGATTCGGCGT................................................................................................................2113.0030110100000
............................................................................................................................................................................TAGCACCACATGATTCGGAC.................................................................................................................2013.0030021000000
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................2013.0031010100000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGAT..............................................................................................................2313.0030101100000
............................................................................................................................................................................TAGCACCACATGATTCGGCCT................................................................................................................2113.0030111000000
............................................................................................................................................................................TAGCACCACATGATTCGGTA.................................................................................................................2013.0030200100000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCC..............................................................................................................2312.0020100010000
..................................................................................................................GCCCGGATTCTGTGTGTGCTAAA........................................................................................................................................................................2312.0020200000000
droPer2
ATA--TGC-------ATC--CTGGCTGCTG----------ACGCCGT----GTCCTTGACGAATGTCAAACACCTC-GCAGGCTC-TGCAGC--AGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGCT-GTGTT-----C-----------TTAAAAGCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACACCTTC--------------AGTATCC-------A-AGTCG----------------------CATT-----------------CATTAATAC-T--GASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211118009.001180099513513758254527313631209
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2012555.00255574176110022768046
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................2212290.0022906235423125180340
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211959.0095972110863144112
.............................................................................................................................................................................AGCACCACATGATTCGGCTG................................................................................................................201803.00803177742325
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................221669.0066936011510451354
............................................................................................................................................................................TAGCACCACATGATTCGGCTGG...............................................................................................................221377.00377302101212410
............................................................................................................................................................................TAGCACCACATGATTCGGCTGC...............................................................................................................221354.0035421853910640
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211331.003311721458330
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191303.003032532576120
..................................................................................................................GCCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................211152.001521538051480
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................231100.0010017819161822
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTT..............................................................................................................23185.0085372402157
...............................................................................................................................................................................CACCACATGATTCGGCTG................................................................................................................18184.00846580371
..............................................................................................................................................................................GCACCACATGATTCGGCTG................................................................................................................19175.007546244100
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................20161.00615900011
............................................................................................................................................................................TAGCACCACATGATTCGGCTGAA..............................................................................................................23155.00554291030
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTA..............................................................................................................23150.00503460370
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................21143.004324421120
.............................................................................................................................................................................AGCACCACATGATTCGGCTGT...............................................................................................................21143.00430430000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGAAA.............................................................................................................24141.00413280001
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19141.00410390020
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18134.003414214112
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................22132.00322161121
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................20126.00262400020
............................................................................................................................................................................TAGCACCACATGATTCGGCTGGT..............................................................................................................23125.00251115170
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTAA.............................................................................................................24123.00231670000
..................................................................................................................GCCCGGATTCTGTGTGTGCTGC.........................................................................................................................................................................22122.0022342238
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTG................................................................................................................22121.00210210000
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................20119.00194120120
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTC..............................................................................................................23115.0015310281
..................................................................................................................GCCCGGATTCTGTGTGTGCT...........................................................................................................................................................................20114.0014030128
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................22114.00141200110
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCT..............................................................................................................23112.0012020190
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................21112.00120120000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGA...............................................................................................................21111.00110110000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................2217.007160000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGGC..............................................................................................................2316.006002130
.............................................................................................................................................................................AGCACCACATGATTCGGCTA................................................................................................................2016.006060000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCA..............................................................................................................2315.005400010
............................................................................................................................................................................TAGCACCACATGATTCGGCAC................................................................................................................2114.004310000
............................................................................................................................................................................TAGCACCACATGATTCGGCTCG...............................................................................................................2214.004000040
.............................................................................................................................................................................AGCACCACATGATTCGGCTGC...............................................................................................................2114.004040000
...................................................................................................................CCCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................2214.004020011
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTAC.............................................................................................................2423.507700000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGG...............................................................................................................2113.003200010
...................................................................................................................CCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................2013.003030000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTTA.............................................................................................................2413.003120000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................2313.003300000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................2113.003030000
..................................................................................................................GCCCGGATTCTGTGTGTGCTA..........................................................................................................................................................................2113.003030000
.........................................................................................................................................CT-GTGTT-----C-----------TTAAAAGCCG.....................................................................................................................................1813.003201000
..................................................................................................................GCCCGGATTCTGTGTGTGCTGA.........................................................................................................................................................................2213.003300000
............................................................................................................................................................................TAGCACCACATGATTCGGCTCT...............................................................................................................2212.002010010
..............................................................................................................................................................................GCACCACATGATTCGGCT.................................................................................................................1812.002020000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................2212.002010010
............................................................................................................................................................................TAGCACCACATGATTCGGCTGAT..............................................................................................................2312.002100100
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTCA.............................................................................................................2412.002100001
............................................................................................................................................................................TAGCACCACATGATTCGGT..................................................................................................................1912.002110000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGCC..............................................................................................................2312.002000020
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCGT.......................................................................................................................................................................2412.002001010
................................................................................................................................................................................ACCACATGATTCGGCTGT...............................................................................................................1812.002100100
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTCC.............................................................................................................2412.002200000
.............................................................................................................................................................................AGCACCACATGATTCGGC..................................................................................................................1812.002020000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................2212.002100010
.............................................................................................................................................................................AGCACCACATGATTCGGCTAA...............................................................................................................2112.002020000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTGT...............................................................................................................2312.002020000
.............................................................................................................................................................................AGCACCACATGATTCGGCTGTT..............................................................................................................2212.002020000
droWil2
CCG---GC-------ATT--A------CCT----------ATGCCGT----GTCCTTGACGAATGTCAAATTT----TCTGACTCCTGCAACTCATGTAAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGCT-ACAACAAG-AA-----------CT--AAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGTCATC------GTGT-TG-------A-AGACT--T--------A------ATCT---------------------TATCCATAA-T--AASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211202227.002022271763891330790086342997
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2016359.006359449747966816501
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................2215641.005641410882743427236
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................2111899.001899181478043
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2111240.001240121911163
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................2211082.001082743158715123
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................2211063.00106383161911151
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................201690.0069020657166
.........................................................................................................................................CT-ACAACAAG-AA-----------CT--AAGACG.....................................................................................................................................201481.0048111337799
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................201441.004414410000
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211440.00440307661588
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................221384.003843272031816
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191311.003112252503130
..................................................................................................................GCCCGGATTCTGCGAGTGCTGCG........................................................................................................................................................................231234.00234017517141
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................231125.0012576332113
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................20199.0099990000
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................18181.0081698022
..................................................................................................................GCCCGGATTCTGCGAGTGCTG..........................................................................................................................................................................21149.00494142227
..................................................................................................................GCCCGGATTCTGCGAGTGCTGC.........................................................................................................................................................................22147.00470402221
............................................................................................................................................................................TAGCACCACATGATTCGGCTGG...............................................................................................................22146.0046460000
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................19145.00451427130
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................23142.0042314142
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21138.0038137000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................23138.0038740198
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18137.00371110178
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19128.0028027001
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22125.0025222010
............................................................................................................................................................................TAGCACCACATGATTCGGCGG................................................................................................................21122.0022220000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTG..............................................................................................................23118.0018162000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................22115.0015141000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22115.0015132000
................................................................................................................................................................................ACCACATGATTCGGCTTT...............................................................................................................18213.0026251000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCC..............................................................................................................23113.001373201
...............................................................................................TGTAAGGCTTCACCAAGCA...............................................................................................................................................................................................19112.0012000120
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................23111.001128001
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGT..............................................................................................................23111.001190011
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23110.001023140
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................2119.00908010
..........................................................................................................................................T-ACAACAAG-AA-----------CT--AAGACG.....................................................................................................................................1918.00801070
..................................................................................................................GCCCGGATTCTGCGAGTGCTGCGT.......................................................................................................................................................................2418.00800224
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................2318.00861010
.................................................................................................................AGCCCGGATTCTGCGAGTGCTGC.........................................................................................................................................................................2317.00700043
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTCC.............................................................................................................2417.00713003
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................2017.00722030
.............................................................................................................................................................................AGCACCACATGATTCGGCTG................................................................................................................2016.00606000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGTT..............................................................................................................2316.00660000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................2215.00523000
................................................................................................................................................................................ACCACATGATTCGGCTTA...............................................................................................................1815.00550000
............................................................................................................................................................................TAGCACCACATGATTCGGAC.................................................................................................................2014.00440000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTC...............................................................................................................2114.00404000
..................................................................................................................GCCCGGATTCTGCGAGTGCT...........................................................................................................................................................................2014.00411101
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................2114.00440000
.................................................................................................................AGCCCGGATTCTGCGAGTGCTGCG........................................................................................................................................................................2414.00401030
.................................................................................................................AGCCCGGATTCTGCGAGTGCTG..........................................................................................................................................................................2213.00321000
...............................................................................................................................................................................CACCACATGATTCGGCTTT...............................................................................................................1913.00311001
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCCC.............................................................................................................2413.00303000
..................................................................................................................GCCCGGATTCTGCGAGTGCTGT.........................................................................................................................................................................2212.00200002
................................................................................................................CAGCCCGGATTCTGCGAGTGCTG..........................................................................................................................................................................2312.00210010
.................................................................................................................................................................................................CATGGTGAAGTACATCGC..............................................................................................1812.00200020
............................................................................................................................................................................TAGCACCACATGATTCGTT..................................................................................................................1912.00201001
...................................................................................................................................................................T--AAGACGTAGCACCACATGATTCGGCT.................................................................................................................2712.00211000
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................2212.00210010
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAG..............................................................................................................2312.00211000
.................................................................................................................AGCCCGGATTCTGCGAGTGCT...........................................................................................................................................................................2112.00200110
.........................................................................................................................................CT-ACAACAAG-AA-----------CT--AAGAC......................................................................................................................................1912.00200020
..................................................................................................................................................................CT--AAGACGTAGCACCACATGATTC.....................................................................................................................2412.00200110
...................................................................................................................CCCGGATTCTGCGAGTGCTGCG........................................................................................................................................................................2212.00202000
...................................................................................................................................................................T--AAGACGTAGCACCACATGATTCGGC..................................................................................................................2612.00202000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTCA..............................................................................................................2212.00200011
.................................................................................................................AGCCCGGATTCTGCGAGTGC............................................................................................................................................................................2011.00100010
..................................................................................................................GCCCGGATTCTGCGAGTGCTGG.........................................................................................................................................................................2211.00110000
..................................................................................................................GCCCGGATTCTGCGAGTGC............................................................................................................................................................................1911.00100010
droVir3
TTA---TTGACACGCATCTGCTGGCAGCTGTGCGGCATCCTTGA--T----GTCCTTGACGAATGTCAAACGGCTTGGCCGGCTC-AACA-----------GCTGTACAACGAAGCCCGGATACTGTGTGTGTTGCGCT-GTTTA-------------------GAGGTACGTAGCACCACATGATTCGGCTTCGTGGTGCACGCA------ACTGCAACAGA--GGGCGTCA-------A---------------------CGG----TATTTATTAATATAGGC----TA-C-GTAC-A--TASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211460912.00460912628428197159401743875799909359636599422432612275473662751443613911662629382119014165104228709126271223543173262179946771018816151163312756991298741185519058491868144314149911787145815183112196335083468219922261828927710906259510182041678203531416818083141906580196841852712869147401852420185656552335554995510032
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................22129088.00290883871151128618464179232451911315874372492662684226312288738750552854687683766399119763621477882081775291924534575651395241447353115109847460322230777112243127243110951053604626629477475620639515301338674714
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................20121100.00211002339706257472917628041566721169528420212299139675390319421417404352183515412217540565566434683209681611649888128109117187102244179110115895547681756822866078898985930925827317616931322133855666610061008
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................22113944.00139448413025132513716134212461262217243955813931840128341536096914613946437540578651568469375714612190598873601265511510062605041236023136094105674586188581516323439464614180151155334349
..................................................................................................................GCCCGGATACTGTGTGTGTTGC.........................................................................................................................................................................2216041.006041101312531851157422700000014029851215117633374110651111101231100010110155508727530842526251913312229091292911861280
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................2215507.0055074242625623712615510603412402201915825720238545249463356173505133189118171583812021220034455411153111276016183916114861625810698121281226
..................................................................................................................GCCCGGATACTGTGTGTGTTG..........................................................................................................................................................................2113749.0037490039611171644420237258100110140214211856242534154017835193334141000010200100000000004560415246266328422924282024305365361489528
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................2213607.0036074146124411821144400300000001201332419402138441660246223933304281141153054151123645003116111012815611137367295329260357413224451113101
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................2313409.00340911711312311240000423400100050043130731316155421543126132305198841218411223437232000105000714135733676516425322945807267109129
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................2113147.00314734191488518327512011060000001400591324914136132262710531051122409020491923281614121117311521187711021780107311898927126108108129105102445213922
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2112731.0027313533264511342018160000000000000830228910105645132723286575312635123443323333410341630022624162230111322401313151417
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................2412359.0023591011820120200000620000000002212335160250001900731252601049100210010120201000001200094472952304612196813123055398090
..................................................................................................................GCCCGGATACTGTGTGTGTTGCAA.......................................................................................................................................................................2411768.00176800110000100100000000000000120000303100210020000000000000000000000014012911428425690280270326364
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................2311633.0016331444541761062302026041341223452020143524861197423524272631402641300010322111153111001106409195563211198119182215173826
..................................................................................................................GCCCGGATACTGTGTGTGTTGCG........................................................................................................................................................................2311434.001434112021122123105100000000050241071471215921110351011251816201428814943510051330410253216014479851071882989793430
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................2311416.00141631193361766000012300000040034252030212427115133734336339318475354628411187470011461004146486502842332040393726255275
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................2111182.00118221835125256010120000010000801880103222118000205630747730997764129331000413717333937212060245112730
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................1911177.001177253328281402000002010232122011211419242186253022924232083433603335464143110434405643939187662604563511520213859
..................................................................................................................GCCCGGATACTGTGTGTGTTGCA........................................................................................................................................................................2311167.0011670000000000003010000000000011000100000000000000000000000000000100070633900000132250227234243
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................2011069.001069059052350400000210000001004327710031058456100000000010000010002110711200922511501014
...................................................................................TC-AACA-----------GCTGTACAACGAA...............................................................................................................................................................................................191520.0052000101240000022000100400523592102810405600000000000000000000400000404053283527123732424104541
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................241414.0041410451440000000000000001004241019413551201022191315100000000000200000002000344445147141408851317
..................................................................................................................GCCCGGATACTGTGTGTGTTGCAAA-.....................................................................................................................................................................251385.00385000000000000310000000000000000001011010000000000000000000000000003335273000101946577581
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................201385.0038510911020000000000000100210420101111119685001100010000100000011000003034150110001544465561
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................201333.00333331465109100000000000000010001000220400000031010000010000101000000000072000012520110
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCC..............................................................................................................231268.0026837033114150000000000000230072112221372102300006210000000000000000010002050000110261000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................231256.00256009730100000100000003005557411115301168918616700000000101010100012120901013330142311044
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................231246.0024620143204000000010000050080013101161251021016141340000000000010000000400042813120010004151268
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................231243.00243130714300000000000000220040132303214470201020411000000000000000001000500050000001500311
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................231241.002418016151100000000000000100085165181910362601121112000000000000000000010400044222224722036
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................211211.0021100106000000000000000000022141000010325550100000000000000000000000023257000000425212929
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................181196.001960030104100100000000030158710851046100128118111000000000000000000001006171142000000111410
..................................................................................................................GCCCGGATACTGTGTGTGTT...........................................................................................................................................................................201153.001530022000012010100000000010001011010120100000000000000000000030000091013100010717162533
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................181150.00150610101102010000100000010042104110010232010000001000000100130202000143115149482140010
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................221148.0014810215200000001000000000041028100035179225100000000000000000000000106318303000103200
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................231145.0014500241100000001000000000064210100002034332300000000000000000000000004084100000100012
................................................................................................................................................................................ACCACATGATTCGGCTT................................................................................................................171133.001330000000000000000000000000000000000000000000000002010000320000000118111700000041131221
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................191126.0012603435302000001000000000123044110043222460000000000000000110011001200024435101021
..................................................................................................................................................................................CACATGATTCGGCTT................................................................................................................151124.0012400000000000000000000000000000000000000001753057818611813215461400000000000000000000
.................................................................................................................................................................................CCACATGATTCGGCTT................................................................................................................161108.0010800000000000000000000000000000000000000007106414421441555205231500000000000000000000
..................................................................................................................GCCCGGATACTGTGTGTGTTGA.........................................................................................................................................................................221107.0010700000000010010000000000101000000000020000000000000000000000000000813711100159102421
..................................................................................................................GCCCGGATACTGTGTGTGT............................................................................................................................................................................191104.00104000000001000000000000000010000000000100000000000000000000000000009614131123128121217
..................................................................................................................GCCCGGATACTGTGTGTGTTGAAA.......................................................................................................................................................................24192.009200000000000000000000000010000000000010000000000000000000000000000414624201481561410
............................................................................................................................................................................TAGCACCACATGATTCGGCTCT...............................................................................................................22191.009112022031002000000000060010110312416010030210000001000000000000001000100000011001102
..................................................................................CTC-AACA-----------GCTGTACAACGAA...............................................................................................................................................................................................20189.0089000110100000020000000000000100005003022000000000000000000000000001681627835121011
................................................................................................................................................................................ACCACATGATTCGGCTTT...............................................................................................................18188.0088230020500000001000000003201100011021200100000000000000000000000012037661291120001
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21186.008600735000000000000000000000000000020100001000000000000000000000000001100000000011
............................................................................................................................................................................TAGCACCACATGATTCGGCG.................................................................................................................20178.0078153800000000000000000000000000000000000000001010010002241011101000022001010200100
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGT..............................................................................................................23172.00723063013000000000000010011010133621122030000000000000000000000000182242021011013
..................................................................................................................GCCCGGATACTGTGTGTGTTGCGCT-G....................................................................................................................................................................26169.006910000000000000000000000000010000000000000000000000000000000000001000101660181600000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAG.............................................................................................................24165.0065002110000000000000000000100013111001003000000000000000000000010001014500010031158
..................................................................................................................GCCCGGATACTGTGTGTGTTGT.........................................................................................................................................................................22163.0063000000000001220000001000100001000000111000000000000000000000000003531002101381411
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................22159.00591081001000001000000010011231351530111490000000001000000000000000300000000010000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................23158.00587101000000000000000030011010101102001010010000000001000000100100042047142501020
..................................................................................................................GCCCGGATACTGTGTGTGTTA..........................................................................................................................................................................21157.00570000000000000100000000000001000000101000000000000000000000000000076700000038877
................................................................................................................................................................................ACCACATGATTCGGCTTA...............................................................................................................18152.00521000100000000000000000000010000110110030000000000000000000000000002063636840022
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTTA.............................................................................................................24145.00450021000000000000000000001020603410110001000000000000010000000000063000000003315
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTTC.............................................................................................................24145.00451022111000000000000040010020542803010002000000010000000000000000000100011001000
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22144.004400240000000000000000000000001000000010000000000010011100100000000000000000003181
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTCC.............................................................................................................24143.004310100000000000000000000011000563804000000000000000000000000000100100000200000000
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19140.004000282100100000000000000001100000010100100000000000000000000000000200000010000000
..................................................................................................................GCCCGGATACTGTGTGTGTTGAA........................................................................................................................................................................23139.00390000000000000000000000000000000000000000000000000000000000010000034612000064255
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTTG.............................................................................................................24132.00320030000000000000000010010000242300000100000000000000000000000000030230201002011
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCAA.............................................................................................................24131.00310020000000011000000000030000000010002300000000000000000000000000073000020011022
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGA..............................................................................................................23131.00312232000000000000000010011000000000000100000000000000000000000000004201000012152
............................................................................................................................................................................TAGCACCACATGATTCGGCTGG...............................................................................................................22130.003062100000000001000000000000000000000000000000000000000000000001000000001000000000
..................................................................................................................GCCCGGATACTGTGTGTGTTT..........................................................................................................................................................................21128.00280000100011011100000000010101000000200000000000000000000000000000023400000011033
............................................................................................................................................................................TAGCACCACATGATTCGGCTTACA.............................................................................................................24127.00270000001000000000000000010101000000058520010000000000000000000000001000000001000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAC.............................................................................................................24127.00270011000000000000000000000000000010010000000000000000000000000000066300000010124
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTCA.............................................................................................................24126.00260022100000001000000000030002010000111001000000000000000000000000003000010001041
..................................................................................................................GCCCGGATACTGTGTGTGTTAAA........................................................................................................................................................................23126.00260000000000000000000000000000000000001000000000000000000000000000045200000002057
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAG.............................................................................................................24126.00260010000000000000000000021010000010102000000000000000000000000000023022001322000
..................................................................................................................GCCCGGATACTGTGTGTGTTGCAT.......................................................................................................................................................................24126.00260000000000000000000000000000000000000000000000000000000000000000001100000054546
..................................................................................................................GCCCGGATACTGTGTGTG.............................................................................................................................................................................18125.00250001000100000000000000100000020100000010000000000000000000000000000120502012023
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22124.00241301100001000000000110000000111001110011001000000000000000001000020000001010001
..................................................................................................................GCCCGGATACTGTGTGTGTTAA.........................................................................................................................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000003600000053043
............................................................................................................................................................................TAGCACCACATGATTCGGAA.................................................................................................................20122.00220000000000000000000000000000000000000000000000000000000000000000033300000002074
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................23122.00220012101000000000000000010021100110101020000000000000001001000000011000000100001
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................21122.002201122001000000000000000000010000020000000000000000000000000000002000000000001000
..................................................................................................................GCCCGGATACTGTGTGTGTTGCAG.......................................................................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000002000000003627
.............................................................................................................................................................................AGCACCACATGATTCGGCTTC...............................................................................................................21119.001900161000000000000000000000000000000000010000000000000000000000001000000000000000
.....................................................................................................................CGGATACTGTGTGTGTTGCG........................................................................................................................................................................20118.00180000000000000000000000000000010000000000000000000110000000000000000050043300000
............................................................................................................................................................................TAGCACCACATGATTCGGAAA................................................................................................................21117.00170000000000000000000000000000000000001000000000000000000000000000023000000003143
.................................................................................................................................................................................CCACATGATTCGGCTTA...............................................................................................................17116.00160000000000000000000000000000000000000000000100000000000000000000011400000022131
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCTC.............................................................................................................24116.00165010110000000000000000000100000201000000000000000000000000000000000000201000001
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGAA.............................................................................................................24116.00160000000000001000000000000010000100000110000000000000000000000000032100000001031
............................................................................................................................................................................TAGCACCACATGATTCGGCTCA...............................................................................................................22116.00160001200000000000000000001000001200022100000000000000000000000000020000000000110
............................................................................................................................................................................TAGCACCACATGATTCGGCTTATA.............................................................................................................24115.00150010000000000000000000010010110000023110000000000000000000000000020000000001000
..................................................................................................................GCCCGGATACTGTGTGTGTTGCT........................................................................................................................................................................23115.00150002000000000000000000000000000000000000000000000000000000000000012200000001322
...................................................................................................................CCCGGATACTGTGTGTGTTGC.........................................................................................................................................................................21114.00140020000000000000000000000000000000000000000000000000000000000000000210102000132
............................................................................................................................................................................TAGCACCACATGATTCGGA..................................................................................................................19114.00140000000010000000000000010000000000000100000000000000000000000100031000000011013
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................21114.00143004000000000000000020000000000000000000000000000000000000000000000000003010001
..................................................................................................................GCCCGGATACTGTGTGTGTTGCC........................................................................................................................................................................23113.00130000000000000000000020000010110001000000000000000000000000000000001000000102120
................................................................................................................................................................................ACCACATGATTCGGCTTC...............................................................................................................18113.00134000100000000000000000000000000100000000000000000000000000000000000000103300000
.................................................................................................................................................................................CCACATGATTCGGCTTT...............................................................................................................17113.00130000000000000000000000000000000000000000012101000011010100000000000100000010011
.................................................................................................................................................................................CCACATGATTCGGCT.................................................................................................................15112.00120000000000000000000000000000000000000000002001101140001001000000000000000000000
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................22112.00121300000000000000000000010000001000100010000000000000000000000000010100100000001
....................................................................................C-AACA-----------GCTGTACAACGAA...............................................................................................................................................................................................18112.00120000000000000000000000020000000000000000000000000000000000000000000012030300010
...................................................................................................................CCCGGATACTGTGTGTGTTGCG........................................................................................................................................................................22112.00120020000000000000000000000000000000000000000000000000000000000000000021110500000
............................................................................................................................................................................TAGCACCACATGATTCGGCAAA...............................................................................................................22111.00110000000000000000000000001010000000001000000000000000001000000000003000000003100
............................................................................................................................................................................TAGCACCACATGATTCGGCAC................................................................................................................21110.00100001000000000000000000000000000000000000000000000000000000000000011000000001231
droMoj3
CGC--CTT-------ATC--C-------------------TTGA--T----GTCCTTGACGAATGTCAAACAGCTTGGCTGGCTT-GGTA-----------GCTGAACTACGAAGCCCGGGTTTTGTGTGTGCCGCGCT-GTTTT--------------------GAGTACGTAGCACCACATGATTCGGCTTGGTAGTACAGGCT------CATTCAACAAATTAGGCATCA-------A---------------------TTT----TATAGATTAATACGTGCCAATTCTATATTA-T--TASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................211338328.00338328405772388362943432860321359
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................21116664.0016664204911166173
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................22115042.001504219881253504351209252
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................2018620.0086209411354215136494116
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................2213762.003762745364452286916
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................2012700.00270020631326301
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................2211980.00198030172026158442
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................2211419.00141925745506110015
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................2011134.001134010011330
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................211995.0099512961398641
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAA..............................................................................................................231933.0093339213045222
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................211789.007893088734612
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAAA.............................................................................................................241577.00577473300974
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................231538.00538801117214063
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................191309.0030958818122103
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTA..............................................................................................................231233.00233434111831
..................................................................................................................GCCCGGGTTTTGTGTGTGCCGCG........................................................................................................................................................................231180.001808303937633
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................211138.00138105000330
..................................................................................................................GCCCGGGTTTTGTGTGTGCCG..........................................................................................................................................................................211131.00131122531321912
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................191129.0012963011613
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTAA.............................................................................................................24174.007450000240
............................................................................................................................................................................TAGCACCACATGATTCGGCTAA...............................................................................................................22168.006836101282
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................19161.006151000100
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................21159.005947000120
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................22157.00575400030
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTC..............................................................................................................23154.00549010440
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAT..............................................................................................................23154.005417011341
.............................................................................................................................................................................AGCACCACATGATTCGGCTC................................................................................................................20152.00522000500
..................................................................................................................GCCCGGGTTTTGTGTGTGCCGC.........................................................................................................................................................................22144.00444860233
............................................................................................................................................................................TAGCACCACATGATTCGGCTGT...............................................................................................................22141.00410141332
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18137.003712412441
...............................................................................................................................................................................CACCACATGATTCGGCTT................................................................................................................18133.003314001171
............................................................................................................................................................................TAGCACCACATGATTCGGCCC................................................................................................................21132.00320000320
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAAA.............................................................................................................23128.00282800000
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGT..............................................................................................................23126.00264211180
............................................................................................................................................................................TAGCACCACATGATTCGGCTAAA..............................................................................................................23125.00251600072
.............................................................................................................................................................................AGCACCACATGATTCGGCTTAA..............................................................................................................22124.00242300010
............................................................................................................................................................................TAGCACCACATGATTCGGCA.................................................................................................................20124.00246102123
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGG..............................................................................................................23123.00237000160
............................................................................................................................................................................TAGCACCACATGATTCGGCAA................................................................................................................21122.00229000130
............................................................................................................................................................................TAGCACCACATGATTCGGCTAT...............................................................................................................22120.00207000130
.............................................................................................................................................................................AGCACCACATGATTCGGCTA................................................................................................................20119.00191900000
.............................................................................................................................................................................AGCACCACATGATTCGGCTTC...............................................................................................................21119.00191600030
..................................................................................................................GCCCGGGTTTTGTGTGTGCC...........................................................................................................................................................................20118.0018125262
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................23118.00181200150
............................................................................................................................................................................TAGCACCACATGATTCGGCTTAC..............................................................................................................23115.0015600090
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................23114.0014900032
.............................................................................................................................................................................AGCACCACATGATTCGGCTTG...............................................................................................................21113.00131000030
............................................................................................................................................................................TAGCACCACATGATTCGGCTTGA..............................................................................................................23112.0012401070
............................................................................................................................................................................TAGCACCACATGATTCGGCTGC...............................................................................................................22112.00120000120
............................................................................................................................................................................TAGCACCACATGATTCGGCTGA...............................................................................................................22111.0011111170
............................................................................................................................................................................TAGCACCACATGATTCGGCAC................................................................................................................21110.00100000100
..............................................................................................................................................................................GCACCACATGATTCGGCTC................................................................................................................19110.00100000100
..............................................................................................................................................................................GCACCACATGATTCGGCTTT...............................................................................................................2019.009500040
droGri2
TCG---TT-------ATC--C-------------------CAGA--T----GTCCTTGACGAATGTCAAATG------------------------------CTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGAT----TTGCCATACACATAAATATACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCA------ACTCCATCGCC---AGT--TAGATAGATAA----AT-C--------AATC---AAGA---------------------TATCTAACA-T--ACSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................................................TAGCACCACATGATTCGGCTT................................................................................................................2112162.0021621466696
............................................................................................................................................................................TAGCACCACATGATTCGGCTTC...............................................................................................................221229.00229127102
............................................................................................................................................................................TAGCACCACATGATTCGGCTTT...............................................................................................................221211.0021117338
............................................................................................................................................................................TAGCACCACATGATTCGGCT.................................................................................................................201141.0014110239
.............................................................................................................................................................................AGCACCACATGATTCGGCTT................................................................................................................20190.0090900
............................................................................................................................................................................TAGCACCACATGATTCGGC..................................................................................................................19121.0021192
............................................................................................................................................................................TAGCACCACATGATTCGGCTG................................................................................................................21116.0016151
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCT..............................................................................................................23116.001697
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................23115.0015114
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCA..............................................................................................................23113.001358
.............................................................................................................................................................................AGCACCACATGATTCGGCTTT...............................................................................................................21113.0013130
............................................................................................................................................................................TAGCACCACATGATTCGG...................................................................................................................18111.0011110
............................................................................................................................................................................TAGCACCACATGATTCGGCTTTT..............................................................................................................23111.0011110
............................................................................................................................................................................TAGCACCACATGATTCGGCTTA...............................................................................................................2216.00633
.............................................................................................................................................................................AGCACCACATGATTCGGCT.................................................................................................................1915.00550
.............................................................................................................................................................................AGCACCACATGATTCGGCTTC...............................................................................................................2115.00550
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCC..............................................................................................................2314.00422
..............................................................................................................................................................................GCACCACATGATTCGGCTT................................................................................................................1914.00431
..................................................................................................................GCCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................2114.00431
.................................................................................................................AGCCCGGATTCTGTGTGTGCT...........................................................................................................................................................................2113.00321
.........................................................................................................................................TTTGCTGAT----TTGCCATACACAT..............................................................................................................................................2213.00330
............................................................................................................................................................................TAGCACCACATGATTCGGCTA................................................................................................................2113.00330
..................................................................................................................GCCCGGATTCTGTGTGTGCTGCGT.......................................................................................................................................................................2412.00220
..................................................................................................................GCCCGGATTCTGTGTGTGCTGC.........................................................................................................................................................................2212.00211
.................................................................................................................AGCCCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................2412.00211
............................................................................................................................................................................TAGCACCACATGATTCGGCTTG...............................................................................................................2212.00220
...........................................................................................................................................................................GTAGCACCACATGATTCGGCT.................................................................................................................2111.00110
....................................................................................................................CCGGATTCTGTGTGTGCTGCG........................................................................................................................................................................2111.00110
..........................................................................................................................................TTGCTGAT----TTGCCATACACAT..............................................................................................................................................2111.00110
.............................................................................................................................................................................AGCACCACATGATTCGGCTTCC..............................................................................................................2211.00110
............................................................................................................................................................................TAGCACCACATGATTCGGCC.................................................................................................................2011.00101
.............................................................................................................................................................................AGCACCACATGATTCGGCTTG...............................................................................................................2111.00110
.........................................................................................................................................TTTGCTGAT----TTGCCATACAC................................................................................................................................................2011.00110
.............................................................................................................................................................................AGCACCACATGATTCGGC..................................................................................................................1811.00110
.................................................................................................................AGCCCGGATTCTGTGTGTGCTGC.........................................................................................................................................................................2311.00101
.............................................................................................................................................................................AGCACCACATGATTCGGCTG................................................................................................................2011.00110
............................................................................................................................................................................TAGCACCACATGATTCGGCTC................................................................................................................2111.00101
...................................................................................................................CCCGGATTCTGTGTGTGCTGC.........................................................................................................................................................................2111.00110
............................................................................................................................................................................TAGCACCACATGATTCGGCTTCG..............................................................................................................2311.00110
...................................................................................................................CCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................2011.00110
.............................................................................................................................................................................AGCACCACATGATTCGGCTTA...............................................................................................................2111.00110
.........................................................................................................................................TTTGCTGAT----TTGCCATACACATAAATAT........................................................................................................................................2811.00110
.................................................................................................................AGCCCGGATTCTGTGTGTGCTG..........................................................................................................................................................................2211.00101
.............................................................................................................................................................................AGCACCACATGATTCGGCTTTT..............................................................................................................2211.00110
...........................................................................................................................................................................GTAGCACCACATGATTCGGCTT................................................................................................................2211.00110

Generated: 10/20/2015 at 07:31 PM