ID:

der_21

 Coordinate:

scaffold_4784:11686871-11686926 -

 Confidence:

confident

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3

Flybase annnotation

intron [Dere\GG13894-in]; CDS [Dere\GG13894-cds]; CDS [Dere\GG13894-cds]

No Repeatable elements found

Sense Strand Reads

CTGCCCGGAACCGGACGACATTTGCGTCAAGCTGACAGAGCGACGCGGCGGTAAGCGGAATTCCTTTGTGCTCCAAACCCCATAAACAAATGAATCCCGCTTTCAGCCAGGGAAACCATCACTCGTGACTGCCTTAGCGCGCTAAGCTTCCGCAAA

**************************************************..((((((.((((.(((((................))))).)))).))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V108

head

 V107

male body		 M055

female body

 V060

head

 GSM1528801

follicle cells		 M057

embryo

 V040

embryo
..................................................GTAAGCGGAATTCCTTTGTGC..................................................................................... 21 0 1 6540.00 6540 5097 982 175 251 0 15 20
..................................................GTAAGCGGAATTCCTTTGTG...................................................................................... 20 0 1 2157.00 2157 1287 484 208 159 0 7 12
..................................................GTAAGCGGAATTCCTTTGTGCT.................................................................................... 22 0 1 2101.00 2101 982 588 329 156 19 14 13
..................................................GTAAGCGGAATTCCTTTGTGCTCCA................................................................................. 25 0 1 859.00 859 285 218 148 12 193 2 1
..................................................GTAAGCGGAATTCCTTTGTGCTC................................................................................... 23 0 1 839.00 839 216 193 219 66 67 71 7
..................................................GTAAGCGGAATTCCTTTGTGCTCC.................................................................................. 24 0 1 391.00 391 76 95 207 10 0 3 0
..................................................GTAAGCGGAATTCCTTTGTGCTT................................................................................... 23 1 1 184.00 184 55 44 24 6 55 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAACC............................................................................. 29 0 1 177.00 177 0 15 142 0 15 5 0
....................................................................................AACAAATGAATCCCGCTTTCAG.................................................. 22 0 1 169.00 169 67 16 63 3 0 6 14
..................................................GTAAGCGGAATTCCTTTGTGCTCCAA................................................................................ 26 0 1 157.00 157 9 12 126 1 7 2 0
..................................................GTAAGCGGAATTCCTTTG........................................................................................ 18 0 1 131.00 131 113 7 7 4 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGT..................................................................................... 21 1 1 118.00 118 40 49 16 13 0 0 0
....................................................................................AACAAATGAATCCCGCTTTCA................................................... 21 0 1 101.00 101 57 13 23 1 0 2 5
..................................................GTAAGCGGAATTCCTTTGT....................................................................................... 19 0 1 101.00 101 39 35 14 12 0 1 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAAC.............................................................................. 28 0 1 94.00 94 7 10 59 1 15 2 0
.....................................................................................ACAAATGAATCCCGCTTTCAGT................................................. 22 1 1 84.00 84 29 14 28 5 0 7 1
..................................................GTAAGCTGAATTCCTTTGTGC..................................................................................... 21 1 1 63.00 63 61 2 0 0 0 0 0
.....................................................................................ACAAATGAATCCCGCTTTCAG.................................................. 21 0 1 55.00 55 28 1 21 2 0 3 0
..................................................GTAAGCGGAATTCCTTTGTT...................................................................................... 20 1 1 55.00 55 34 14 1 4 0 0 2
.....................................................................................ACAAATGAATCCCGCTTTCA................................................... 20 0 1 50.00 50 35 4 8 3 0 0 0
..................................................GTAATCGGAATTCCTTTGTGC..................................................................................... 21 1 1 46.00 46 45 1 0 0 0 0 0
..................................................GTAAGCGGAATTCATTTGTGC..................................................................................... 21 1 1 45.00 45 44 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGTT.................................................................................... 22 1 1 42.00 42 32 9 1 0 0 0 0
......................................................................................CAAATGAATCCCGCTTTCAGT................................................. 21 1 1 41.00 41 12 7 11 6 0 4 1
..................................................GTAAGCGGAATTCCTTTGTTC..................................................................................... 21 1 1 39.00 39 33 0 2 2 0 0 2
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAA............................................................................... 27 0 1 39.00 39 1 4 32 1 1 0 0
..................................................GTAAGCGGAATTCCTTTGTGA..................................................................................... 21 1 1 37.00 37 28 7 1 1 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGCTC................................................................................... 23 1 1 35.00 35 0 1 2 0 0 32 0
..................................................GTAAGCGTAATTCCTTTGTGC..................................................................................... 21 1 1 31.00 31 29 0 0 2 0 0 0
.....................................................................................ACAAATGAATCCCGCTTTCAGA................................................. 22 1 1 27.00 27 7 0 18 0 0 1 1
..................................................GTAAGCGGAATTCCTTTGTGTTT................................................................................... 23 2 1 27.00 27 14 13 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTTGC..................................................................................... 21 1 1 25.00 25 21 1 0 3 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTA................................................................................... 23 1 1 25.00 25 16 7 0 1 1 0 0
..................................................GTAAGCGGAATTACTTTGTGC..................................................................................... 21 1 1 24.00 24 23 0 0 0 0 1 0
..................................................GTAAGAGGAATTCCTTTGTGC..................................................................................... 21 1 1 23.00 23 23 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCT.................................................................................. 24 1 1 22.00 22 9 4 8 1 0 0 0
......................................................................................CAAATGAATCCCGCTTTCAGA................................................. 21 1 1 22.00 22 4 0 14 1 0 3 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCT................................................................................. 25 1 1 21.00 21 3 8 8 2 0 0 0
...................................................TAAGCGGAATTCCTTTGTGC..................................................................................... 20 0 1 20.00 20 2 1 17 0 0 0 0
...................................................TAAGCGGAATTCCTTTGTGCT.................................................................................... 21 0 1 20.00 20 1 0 19 0 0 0 0
..................................................GTAAGCTGAATTCCTTTGTG...................................................................................... 20 1 1 19.00 19 18 1 0 0 0 0 0
..................................................TTAAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 19.00 19 15 4 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTTT.................................................................................. 24 2 1 18.00 18 12 4 1 1 0 0 0
..................................................GTAAGCTGAATTCCTTTGTGCT.................................................................................... 22 1 1 18.00 18 17 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAACCCCA.......................................................................... 32 0 1 17.00 17 0 0 0 0 17 0 0
...................................................TAAGCGGAATTCCTTTGTG...................................................................................... 19 0 1 17.00 17 2 0 15 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGGGC..................................................................................... 21 1 1 16.00 16 13 0 0 3 0 0 0
..................................................GTAAGCGGAATTCCTTTT........................................................................................ 18 1 1 16.00 16 16 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTCC..................................................................................... 21 1 1 15.00 15 12 2 0 1 0 0 0
...................................................TAAGCGGAATTCCTTTGTGCTC................................................................................... 22 0 1 14.00 14 0 1 12 0 0 1 0
..................................................GGAAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 14.00 14 1 5 1 0 0 7 0
..................................................GTAAGCGGAATTCCTTTGTGCC.................................................................................... 22 1 1 13.00 13 2 2 0 1 0 8 0
..................................................GTAAGCGGAATTCCTTTGCGC..................................................................................... 21 1 1 13.00 13 13 0 0 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 12.00 12 0 3 1 1 0 7 0
..................................................GTAAGCGGAATCCCTTTGTGC..................................................................................... 21 1 1 12.00 12 10 0 1 1 0 0 0
...................................................TAAGCGGAATTCCTTTGTGCTCC.................................................................................. 23 0 1 12.00 12 0 0 12 0 0 0 0
...................................................TAAGCGGAATTCCTTTGTGCTCCAAACC............................................................................. 28 0 1 11.00 11 0 0 11 0 0 0 0
..................................................GTAAGTGGAATTCCTTTGTGC..................................................................................... 21 1 1 10.00 10 8 1 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTTG...................................................................................... 20 1 1 10.00 10 6 1 1 2 0 0 0
..................................................GTAAGAGGAATTCCTTTGTG...................................................................................... 20 1 1 10.00 10 9 1 0 0 0 0 0
..................................................GTAATCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 10.00 10 6 2 1 0 0 0 1
..................................................GTGAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 10.00 10 9 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCA.................................................................................... 22 1 1 10.00 10 4 2 2 2 0 0 0
......................................................................................CAAATGAATCCCGCTTTCAG.................................................. 20 0 1 10.00 10 4 1 4 0 0 1 0
..................................................ATAAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 9.00 9 7 1 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAACT............................................................................. 29 1 1 9.00 9 0 2 7 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTTT..................................................................................... 21 2 1 9.00 9 4 4 0 1 0 0 0
..................................................GTAAGCGGAATTCCCTTGTGC..................................................................................... 21 1 1 9.00 9 7 1 1 0 0 0 0
..................................................GTAAGCGAAATTCCTTTGTGC..................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTTGCT.................................................................................... 22 1 1 8.00 8 6 0 0 1 0 0 1
..................................................GTAAGCGGAATTCATTTGTGCT.................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0 0
..................................................GCAAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0 0
....................................................................................AACAAATGAATCCCGCTTTCAGT................................................. 23 1 1 8.00 8 4 1 3 0 0 0 0
..................................................TTAAGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 8.00 8 4 1 3 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTTCTC................................................................................... 23 1 1 8.00 8 5 1 2 0 0 0 0
..................................................GTAAGCAGAATTCCTTTGTGC..................................................................................... 21 1 1 8.00 8 6 0 0 2 0 0 0
..................................................GTAATCGGAATTCCTTTGTG...................................................................................... 20 1 1 8.00 8 7 1 0 0 0 0 0
..................................................GTAAGCGTAATTCCTTTGTG...................................................................................... 20 1 1 8.00 8 8 0 0 0 0 0 0
..................................................GTAAGCGCAATTCCTTTGTGC..................................................................................... 21 1 1 7.00 7 5 1 1 0 0 0 0
..................................................TTAAGCGGAATTCCTTTGTG...................................................................................... 20 1 1 7.00 7 2 4 0 0 0 0 1
...................................................TAAGCGGAATTCCTTTGTGCTCCAAAC.............................................................................. 27 0 1 7.00 7 0 0 7 0 0 0 0
..................................................GTAAGCGGAGTTCCTTTGTGC..................................................................................... 21 1 1 7.00 7 5 2 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTCGTGC..................................................................................... 21 1 1 7.00 7 6 0 0 1 0 0 0
..................................................GTCAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0 0
......................................................................................CAAATGAATCCCGCTTTCAGTT................................................ 22 2 1 7.00 7 4 1 2 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTG...................................................................................... 20 1 1 7.00 7 0 4 1 1 0 1 0
...................................................TAAGCGGAATTCCTTTGTGCTCCAA................................................................................ 25 0 1 7.00 7 0 0 7 0 0 0 0
..................................................GTAAGCGGAATTACTTTGTGCT.................................................................................... 22 1 1 6.00 6 5 0 0 0 0 1 0
..................................................GTAAGCGGAATTCCTTTGCG...................................................................................... 20 1 1 6.00 6 4 2 0 0 0 0 0
..................................................GTAAGAGGAATTCCTTTGTGCTCCA................................................................................. 25 1 1 6.00 6 3 0 0 0 3 0 0
..................................................GTAAGCGTAATTCCTTTGTGCT.................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGC....................................................................................... 19 1 1 6.00 6 3 2 1 0 0 0 0
..................................................GTAAGCGGCATTCCTTTGTGC..................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTATGC..................................................................................... 21 1 1 6.00 6 5 1 0 0 0 0 0
....................................................................................AACAAATGAATCCCGCTTTC.................................................... 20 0 1 6.00 6 3 1 2 0 0 0 0
..................................................GTAAGCGGAATTCCCTTGTGCT.................................................................................... 22 1 1 6.00 6 4 0 1 1 0 0 0
..................................................GTAAGCGGAATTCGTTTGTGCTCCA................................................................................. 25 1 1 6.00 6 0 1 0 0 5 0 0
.........................................................................CAAACCCCATAAACAAATGAATCCCGCT....................................................... 28 0 1 6.00 6 6 0 0 0 0 0 0
..................................................GTAAGCGGAATTACTTTGTG...................................................................................... 20 1 2 5.50 11 9 0 0 2 0 0 0
..................................................GTAAGCGGAATTCATTTGTG...................................................................................... 20 1 2 5.50 11 10 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTCCT.................................................................................... 22 1 1 5.00 5 3 0 2 0 0 0 0
..................................................GTAAGCGGAACTCCTTTGTGCT.................................................................................... 22 1 1 5.00 5 3 1 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGGG...................................................................................... 20 1 1 5.00 5 2 0 3 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAT............................................................................... 27 1 1 5.00 5 1 0 2 0 2 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCTT................................................................................ 26 2 1 5.00 5 0 0 5 0 0 0 0
..................................................GTAAGCGGAATTCATTTGTGCTCCA................................................................................. 25 1 1 5.00 5 4 0 0 0 1 0 0
..................................................GTAAGCGGGATTCCTTTGTGC..................................................................................... 21 1 1 5.00 5 2 2 0 0 0 0 1
..................................................GTAAGCGGAATTCCTTTGCGCT.................................................................................... 22 1 1 5.00 5 3 1 0 1 0 0 0
..................................................GTAAGCGGACTTCCTTTGTGC..................................................................................... 21 1 1 5.00 5 3 0 0 2 0 0 0
....................................................AAGCGGAATTCCTTTGTGC..................................................................................... 19 0 1 5.00 5 4 0 1 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGCTCCAAACC............................................................................. 29 1 1 4.00 4 0 0 0 0 0 4 0
..................................................GTAAGCTGAATTCCTTTGTGCTT................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTCGTG...................................................................................... 20 1 1 4.00 4 3 1 0 0 0 0 0
..................................................GTAAGCGGCATTCCTTTGTG...................................................................................... 20 1 1 4.00 4 3 0 1 0 0 0 0
..................................................ATAAGCGGAATTCCTTTGTG...................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0 0
..................................................GTAAGCGGAACTCCTTTGTG...................................................................................... 20 1 1 4.00 4 3 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGTTTT.................................................................................. 24 3 1 4.00 4 1 3 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCTT................................................................................. 25 2 1 4.00 4 1 1 2 0 0 0 0
..................................................GTCAGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 4.00 4 3 1 0 0 0 0 0
..................................................GTAAGCGGAATTTCTTTGTGC..................................................................................... 21 1 1 4.00 4 3 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCC................................................................................. 25 1 1 4.00 4 2 0 2 0 0 0 0
..................................................GTAGGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................CAAACCCCATAAACAAATGAATCCCG......................................................... 26 0 1 4.00 4 2 0 2 0 0 0 0
..................................................GTACGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 4.00 4 2 1 1 0 0 0 0
..................................................GTATGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 4.00 4 2 0 0 0 0 2 0
..................................................GTACGCGGAATTCCTTTGTGCTC................................................................................... 23 1 1 4.00 4 0 0 4 0 0 0 0
..................................................GTTAGCGGAATTCCTTTGTGC..................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCA.................................................................................. 24 1 1 4.00 4 2 1 1 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGT....................................................................................... 19 1 1 4.00 4 0 3 0 0 0 1 0
..................................................GTAAGCCGAATTCCTTTGTGC..................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTTC.................................................................................. 24 1 1 4.00 4 3 0 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTTCT.................................................................................... 22 1 1 4.00 4 2 0 1 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTG................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0 0
..................................................GTAAGCGGAATTCCCTTGTG...................................................................................... 20 1 1 4.00 4 2 1 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGGGCT.................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0
..................................................TTAAGCGGAATTCCTTTGTGCTC................................................................................... 23 1 1 4.00 4 1 2 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCG................................................................................. 25 1 1 4.00 4 2 0 0 0 2 0 0
.....................................................................................ACAAATGAATCCCGCTTTCAGC................................................. 22 0 1 4.00 4 0 0 0 0 0 4 0
..................................................GTAAGCGGAATTCCTTTGTGAT.................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAT................................................................................ 26 1 1 3.00 3 0 0 3 0 0 0 0
..................................................GTAAGCGAAATTCCTTTGTGCT.................................................................................... 22 1 1 3.00 3 1 1 1 0 0 0 0
..................................................................................TAAACAAATGAATCCCGCTTTCA................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0
..................................................GTAAGCGGAATTCTTTTGTGCT.................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0
..................................................GTAAGCGAAATTCCTTTGTG...................................................................................... 20 1 1 3.00 3 2 0 1 0 0 0 0
..................................................GGATGCGGAATTCCTTTGTGCTC................................................................................... 23 2 1 3.00 3 0 0 0 0 0 3 0
..................................................GTAAGCGGAATTCCTTTGTGCG.................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0 0
..................................................GTAACCGGAATTCCTTTGTGC..................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGGTCCAAACC............................................................................. 29 1 1 3.00 3 0 0 3 0 0 0 0
..................................................GTAAGCGGAATTCTTTTGTG...................................................................................... 20 1 1 3.00 3 0 1 1 1 0 0 0
..................................................GTAAGCGCAATTCCTTTGTGCT.................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTCTGTGCT.................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0
..................................................GTAAGCGGAATCCCTTTGTG...................................................................................... 20 1 1 3.00 3 1 0 0 1 0 1 0
..................................................GTAAGAGGAATTCCTTTGTGCTC................................................................................... 23 1 1 3.00 3 1 0 1 0 1 0 0
..................................................GTAAGCGTAATTCCTTTGTGCTCCA................................................................................. 25 1 1 3.00 3 2 0 0 0 1 0 0
.......................................................................................AAATGAATCCCGCTTTCAGA................................................. 20 1 1 3.00 3 1 0 2 0 0 0 0
..................................................GTAAGCAGAATTCCTTTGTG...................................................................................... 20 1 1 3.00 3 0 0 1 2 0 0 0
..................................................GTACGCGGAATTCCTTTGTGCTCC.................................................................................. 24 1 1 3.00 3 0 0 3 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGTTC................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGAA.................................................................................... 22 2 1 3.00 3 2 1 0 0 0 0 0
..................................................GTAAGCTGAATTCCTTTGTGCTCCA................................................................................. 25 1 1 3.00 3 3 0 0 0 0 0 0
..................................................GTAAGCAGAATTCCTTTGTGCT.................................................................................... 22 1 1 3.00 3 1 1 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTCTGC..................................................................................... 21 1 1 3.00 3 1 0 0 2 0 0 0
..................................................GTAAGCGGTATTCCTTTGTGC..................................................................................... 21 1 1 3.00 3 1 1 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCCC................................................................................... 23 1 1 3.00 3 0 1 1 1 0 0 0
...................................................................................AAACAAATGAATCCCGCTTTCAG.................................................. 23 0 1 3.00 3 0 0 3 0 0 0 0
..................................................GTAGGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 3.00 3 1 0 1 1 0 0 0
......................................................................................CAAATGAATCCCGCTTTCA................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0
..................................................GTGAGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGCTCCA................................................................................. 25 1 1 3.00 3 0 3 0 0 0 0 0
.....................................................................................ACAAATGAATCCCGCTTTC.................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0
..................................................GTAAGCGGAATTCTTTTGTGC..................................................................................... 21 1 1 3.00 3 2 0 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCAA................................................................................. 25 1 1 3.00 3 2 0 0 0 1 0 0
..................................................GTAATCGGAATTCCTTTGTGCTCC.................................................................................. 24 1 1 3.00 3 2 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGAGC..................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTACA................................................................................. 25 1 1 3.00 3 3 0 0 0 0 0 0
..................................................GCAAGCGGAATTCCTTTGTG...................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
..................................................CTAAGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0 0
..................................................GTAAGCGGAATTCCTCTGTGCTC................................................................................... 23 1 1 3.00 3 2 0 0 0 0 1 0
..................................................GTAAGCGGAATTCCTTTGTC...................................................................................... 20 1 1 3.00 3 0 2 0 1 0 0 0
....................................................AAGCGGAATTCCTTTGTGCTC................................................................................... 21 0 1 3.00 3 0 1 1 0 0 1 0
.....................................................................................ACATATGAATCCCGCTTTCAGT................................................. 22 2 1 3.00 3 0 0 0 0 0 3 0
...................................................TAAGCGGAATTCCTTTGTGCTCCA................................................................................. 24 0 1 3.00 3 0 0 3 0 0 0 0
....................................................................................AACAAATGAATCCTGCTTTCAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAGCTGAATTCCTTTGTTC..................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTATGTGC..................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAACCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0
..................................................GTAAGCGGAACTCCTTTGTGC..................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAGCGGAGTTCCTTTGTGCTCCA................................................................................. 25 1 1 2.00 2 0 0 1 0 1 0 0
..................................................GTAAGCGGATTTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGCGCAATTCCTTTGTGCTCC.................................................................................. 24 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTAC..................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GTATGCGGAATTCCTTTGTGCTC................................................................................... 23 1 1 2.00 2 1 0 0 0 0 1 0
..................................................GAAAGCGGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGCGGAGTTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGCC.................................................................................... 22 2 1 2.00 2 0 0 0 0 0 2 0
..................................................GTAAGCGGAATTCCTTTGTCCTCCAA................................................................................ 26 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGACTTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0
..................................................GTAAGCGGACTTCCTTTGTGCTCCA................................................................................. 25 1 1 2.00 2 0 0 0 0 2 0 0
..................................................GTAAGCGGAGTTCCTTTGTG...................................................................................... 20 1 1 2.00 2 0 2 0 0 0 0 0
..................................................GTAAGTGGAATTCCTTTGTGT..................................................................................... 21 2 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAACGGAATTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0
..................................................GTAAGCGGAATTCCTCTGTGC..................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................TTAAGCGGAATTCCTTTGTGCTCCAAACC............................................................................. 29 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTA...................................................................................... 20 1 1 2.00 2 0 2 0 0 0 0 0
....................................................................................AACAAATGAATCCCGCTTT..................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TTAAGCGGAATTCCTTTGTGCTCC.................................................................................. 24 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGTGGAATTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTT....................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0
...................................................TAAGCGGAATTCCTTTGTGT..................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0 0
.....................................................AGCGGAATTCCTTTGTGCT.................................................................................... 19 0 1 2.00 2 1 0 1 0 0 0 0
.................................................CGTAAGCGGAATTCCTTTGTGCTCCA................................................................................. 26 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAGCGGAATCCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGT..................................................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0
..................................................GTAAGCGGACTTCCTTTGTG...................................................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0
..................................................GTCAGCGGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAAA.............................................................................. 28 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTCCTCCA................................................................................. 25 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGCGGCATTCCTTTGTGCTCC.................................................................................. 24 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTTTT.................................................................................... 22 2 1 2.00 2 0 2 0 0 0 0 0
..................................................GTAAGCGGAATTACTTTGTGCTC................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0
..................................................GGAAGCGGAATTCCTTTGTGCTCC.................................................................................. 24 1 1 2.00 2 0 0 1 0 0 1 0
..................................................GTAAGCGGAATTGCTTTGTGC..................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAACGGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTCTGCT.................................................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0
..................................................TTAAGCGGAATTCCTTTGTGCTCCA................................................................................. 25 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTCTG...................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTATGTGCT.................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGCGGTATTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0
...................................................TAAGCGGAATTCCTTTGT....................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0
..................................................GTACGCGGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 0 0 1 1 0 0 0
..................................................GTAAGCGGAATACCTTTGTGC..................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAACCGGAATTCCTTTGTGCTCCA................................................................................. 25 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................................CAACAAATGAATCCCGCTTTCAG.................................................. 23 1 1 2.00 2 1 0 0 0 0 0 1
..................................................GTAAGAGGAATTCCTTTGTGCT.................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAAGCGGAATGCCTTTGTG...................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTTA.................................................................................. 24 2 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGCGGAATTCGTTTGTGCTCCAAACC............................................................................. 29 1 1 2.00 2 0 0 0 0 2 0 0
..................................................GTAAGCGGAATTCCTTTGTGG..................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0 0
..................................................GTAAGCAGAATTCCTTTGTGCTC................................................................................... 23 1 1 2.00 2 0 0 0 2 0 0 0
....................................................................................AACAAATGAATCCCGCTTTCAT.................................................. 22 1 1 2.00 2 1 0 0 1 0 0 0
..................................................GTACGCGGAATTCCTTTGTGCTCCA................................................................................. 25 1 1 2.00 2 0 0 2 0 0 0 0
.......................................................................................AAATGAATCCCGCTTTCAG.................................................. 19 0 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAAAT.............................................................................. 28 1 1 2.00 2 0 1 0 0 1 0 0
...................................................TAAGCGGAATTCCTTTGTGCTCT.................................................................................. 23 1 1 2.00 2 0 0 2 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTTTCT.................................................................................... 22 2 1 2.00 2 1 0 0 1 0 0 0
....................................................................................AACAAATGCATCCCGCTTTCAG.................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0
..................................................GTAAGCCGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
..................................................GTAGGCGGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0
..................................................GTAAGTGGAATTCCTTTGTG...................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTTTA................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
....................................................AAGCGGAATTCCTTTGTGCT.................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0
..................................................GTAAGAGGAATTCCTTTGTGCTT................................................................................... 23 2 1 2.00 2 1 0 0 0 1 0 0
..................................................GTAATCGGAATTCCTTTG........................................................................................ 18 1 2 1.50 3 3 0 0 0 0 0 0
....................................................................................CACAAATGAATCCCGCTTTCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTACGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAACCGGAATTCCTTTGTGCTCCAA................................................................................ 26 1 1 1.00 1 0 0 0 0 0 1 0
..................................................GTAAGCGGGATTCCTTTGTGCT.................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
..................................................GTACGCGGCATTCCTTTATGCTCCA................................................................................. 25 3 1 1.00 1 0 0 1 0 0 0 0
..................................................GTTAGCGGAATTCCTTTGTGCT.................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAATCTGAATTCCTTTGTGC..................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................................CAAATGAATCCCGCTTTAAGA................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0
...................................................GTAGCGGAATTCCTTTGTGCT.................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
..................................................GTAAGCGGTCTTCCTTTGTGCTC................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTGC.................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCATTGTGC..................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................AAACAAATGAATCCCGCTTTCA................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................ATAAGCGGAATTCCTTTGTGCTCCAAA............................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAGCGGAATCCCTTTGTGCTCCAAACC............................................................................. 29 1 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAGCGGAATTACTTTGTGCG.................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCTGAATTCCTTTGTGCTC................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGTG.................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTTCTTTGTG...................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAG................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGTAATTCCTTTGT....................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTTGCTC................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTGT.................................................................................. 24 2 1 1.00 1 0 0 0 0 0 1 0
..................................................GTAAGCGGAGTTCCTTTGTTC..................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCCAACC.............................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCTTT................................................................................ 26 3 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCTCGA................................................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0
..................................................GGAAGCGGAATTCCTTTGTGCTCCAA................................................................................ 26 1 1 1.00 1 0 0 1 0 0 0 0
........................................................................CCAAACCCCATAAACAAATGAATCCC.......................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
.................................................TGTAAGCGGAATTCCTTTGTGCTCCAA................................................................................ 27 1 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAGCAGAATTCCTTTGT....................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAATCGGCATTCCTTTGTGC..................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTTTGCTT................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0
..................................................GTAAGCGGGATTCCTTTGTG...................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................AGCGGAATTCCTTTGTGCTC................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
..................................................GTAAGCGGAATCCCTTTGCGC..................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................AACAAATGAATCCAGCTTTCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTGTG........................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTCTGCTC................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0
..................................................GTAAGCGGAATTCCCTTGTGCTCCAAAC.............................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0
..................................................GTAATCGTAATTCCTTTGTGCT.................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCCTTGTGCTCCA................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAACGGAATTCCTTTGTGCTC................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................ACAACTGACTCCCGCTTTCAG.................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGAATTCCTTTGTGCACCAA................................................................................ 26 1 1 1.00 1 0 0 1 0 0 0 0
......................................................................................CAAATTAATCCCGCTTTCAGT................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0
..................................................GTAAGCGGATTTCCTTTGTGA..................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0
..................................................GTAAGCGGAATTCCTATGTG...................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0

Anti-sense strand reads

GACGGGCCTTGGCCTGCTGTAAACGCAGTTCGACTGTCTCGCTGCGCCGCCATTCGCCTTAAGGAAACACGAGGTTTGGGGTATTTGTTTACTTAGGGCGAAAGTCGGTCCCTTTGGTAGTGAGCACTGACGGAATCGCGCGATTCGAAGGCGTTT

**************************************************..((((((.((((.(((((................))))).)))).))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 M057

embryo
................CTGTAAACGCAGTTCGACTG........................................................................................................................ 20 0 1 1.00 1 1 0
...............................................................................................................................TGACGGGGTCGCGCGATTCGA........ 21 2 2 0.50 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4784:11686820-11686976 - der_21 confident CTGCCCGGAACCGGACGACATTTGCGTCAAGCTGACAGAGCGACGCGGCGGTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAACCCCATAA-ACAAAT---------------------GAA----T---C-CCGCTTTCAGCCAGGGAAACCATCACTCGTGACTGCCTTAGCGCGCTAAGCTTCCGCAAAG
droYak3 3L:11736855-11737011 - CTGCCCTGAACCGGACGACATATGCGTCAAGCTGACGGAGCGACGCGGCGGTAAGCGGAAA---------T-----CCGTT--GT-GATCCGAACCTCAAAA-TCAATT---------------------GAA----A---C-TCGCTTACAGCCAGGGAAACCATCACCCGTGACTGCCTTAGCGCGCTGAGCTTCCGCAAAG
droSec2 scaffold_0:3890154-3890310 - CTGCCCGGAACCGGACGACATTTGCGTCAAAGTGACGGAACGACGCGGCGGTAAGCGGAAA---------A-----CCTCT--GT-GATCCGAGCTCCATTA-ACAAAT---------------------GTT----A---C-TCGCTTTTAGCCAGGGAAACAATCACACGTGACTGCCTCAGCGCGCTGAGCTTCCGCAAAG
droSim2 3l:11411885-11412041 - CTGCCCGGAACCGGACGACATTTGCGTCAAGGTGACGGAACGACGCGGCGGTAAGCGGAAA---------A-----CCTTT--GT-GATCCGAGCTCCATAA-ACAAAT---------------------AAA----A---C-TCGCTTTCAGCCAGGGAAACAATCACACGTGACTGCCTTAGCGCGCTGAGCTTCCGCAAAG
dm3 chr3L:11704001-11704157 - CTGCCCGGAACCGGACGACATTTGCGTCAAGGTGACGGAGCGACGCGGCGGTAAGCGGAAA---------T-----CCTCT--GT-TATCCGAGCTTCATTA-ACAAAT---------------------GAA----A---C-TCGCTTTTAGCCAGGGAAACAATCACACGTGACTGCCTAAGCGCGCTGAGCTTCCGCAAAG
droEug1 scf7180000409711:3579861-3580015 - CTGCCCAGAACCCGACGATATTTGCGTCAAGGTGACAGAGCGCCGAGGCGGTAAGCGGAAA---------T-----CCTTT--GA-ATTT------------AACATGTGCCCTAA-----------------ACGA--AAA-TCTTTTACAGCCAGGGAAACGATCACCCGCGATTGCCTCAGTGCACTAAACTTCCGTAAGG
droBia1 scf7180000302334:147875-148029 - CTGCCCAGAGCCAAACGACATCTGCGTCAAGGTGATCGAGCAACGCGGCGGTAAGCAGGAG---------T-----TCTAT--CT-GTTT------------GTCGCGTTTTTTAA-----------------ACCC--GTA-TCCGTTTCAGCCCAAGAAACCATTACTCGCGAGTGCCTCAGCGCCCTGAGCTTCCGCAAGG
droTak1 scf7180000414445:499052-499206 + CTGCCCGGAACCCGATGACATCTGCGTCAAGGTGACCGAGCGACGCGGCGGTAAGCAGAGA---------T-----CCTTT--AT-TATT------------TCCGCGTGACTTGA-----------------AACC--AAA-TCCCTTTTAGCCAGGGAAACCATCACTCGCGACTGCCTCAGCGCCCTGAGCTTCCGCAAGG
droEle1 scf7180000490993:2090492-2090655 + CTGCCCAGAACCCAACGACATTTGTGTCAAGGTGACTGAGAGACGCGGCGGTAAGTGGAAA---------T-----CCCTT--AT-A---------------AGCACGTGACATAGACTCAAGTCCTAA----TCCC---AA-TTCCTTTCAGCCATGGAAACAATCACCCGCGATTGCCTCAGCGCACTGAGCTTCCGCAAGG
droRho1 scf7180000767448:108021-108184 + CTGCCCGGAACCGGACGATATTTGCGTCAAGCTGACGGAGCGACGCGGCGGTAAGCAGGAA---------T-----CCCTT--CG-A---------------ACCACGTGACCTGGCCCAAAACCCTAATC-----C--AAA-TCCCTTCCAGGCAGTGAAACAATAACCCGCGATTGTCTCAGCGCCCTGAACTTCCGTAAAG
droFic1 scf7180000454113:2996197-2996352 + CTGCCCGGAGCCAAACGACATATGCGTTAAAGTGACCGAAAGACGCGGCTGTAAGTGAGAT---------T-----TG-----GT-CGCCCCA---------ATCACATGACCTAA-----------------ATTC--GAATCCCTTTTCAGCTAGGGAAACAATTACCCGCGATTGCCTTAGCGCCCTGAACTTCCGCAAAG
droKik1 scf7180000302391:1134212-1134372 + CTGCCCAGAACCAAACGACATCTGCGTGAAGGTGACAGAGCGACGCGGCGGTAAGTCCACGCCTCCTTATT-------------TACTCC------------AGCACGTGTCTTGA-----------------TTCCAAGAA-TCCCTTGCAGCCCAGGAGACCATTACACGCGATTGCCTTAGCGCCTTGAGCTTCCGCAAGG
droAna3 scaffold_13337:5968163-5968330 - GTGCCCTGAGCCGGATGACATCTGCGTCAAAGTTACTGAGCGAAGAGGAGGTAAGTGGATGGGGTGGGGGCTGTATTAGA-CA--GATCT------------TTCACGTGGCTTTG-----------------TCTC--AA--ACCCTTCCAGCTCGGGAGACCATCACGCGCGAATGCTTGAGCGCCCTCAACTTCCGCACCG
droBip1 scf7180000396518:31029-31196 - GTGCCCCGAACCGGATGACATCTGCGTCAAAGTGACGGAGCGAAGAGGGGGTAAGTGGTTGGGGCTGGGGTTATATCAGA-TA--GACCT------------TTCACGTGGCTTTG-----------------TCTG---AA-AACCTTTCAGCTCGGGAGACCATCACCCGTGAGTGCCTGAGCGCCCTGAACTTCCGCCGCG
dp5 XR_group6:9988715-9988875 + GTGCCCGGAGCCCAACGATATCTGCGTTAAAGTGACGGAACGCCGCGGCTGTAAGTGGGTC---------T-----AAGGC--TC-GACAGGAGCTTCATAT-TTATGTGGCTTTT-----------------C-------T-TCGATTTCAGCAAAGGAAACGATAACACGTGACTGCCTAAGTGCCCTCAGCTTCCGAACAG
droPer2 scaffold_61:269142-269302 + GTGCCCGGAGCCCAACGATATCTGCGTTAAAGTGACGGAACGCCGCGGCTGTAAGTGGGTC---------T-----AAGGC--TC-GACAGGAGCTTCATAT-TTATGTGGCTTTT-----------------C-------T-TCGATTTCAGCAAAGGAAACGATAACACGTGACTGCCTAAGTGCCCTCAGCTTCCGAACAG
droWil2 scf2_1100000004762:2640734-2640894 + ATGCCCAGAGCCCAATGATATATGCGTGAAAGTCACAGAACGCCGAGGAGGTAAGACGAAA---------T-----ACAGC--AT-GTTGATAACACTCAAA-TTGATT---------------------TAAATTT--G-T-TAAATTGCAGCCCAAGAGACCATCACACGAGATTGTCTTAGTGCCTTGAGTTTCCGCACGG
droVir3 scaffold_13049:23921073-23921173 - ATGTCCTGAGAGCAACGACATTTGCGTAAAAGTGACCGAGCGACGCGG-------------------------------------------------------------------------------------------------------AGCCAAGGAGACCATAACCCGCGATTGTCTTAGTGCGCTCAGCTTTCGCACAG
droMoj3 scaffold_6680:18548545-18548645 - GTGCCCCGAGAGCAACGACATCTGCGTCAAGGTGACGGAGCGGCGTGG-------------------------------------------------------------------------------------------------------AGCCAAGGAGACAATAACAAGGGATTGCCTCAGCGCACTTAACTTCCGCACCG
droGri2 scaffold_15110:9761190-9761290 + GTGTCCCGAGACCAACGATATCTGCGTCAAGGTGACGGAGAGACGCGGC-------------------------------------------------------------------------------------------------------GCCAAGGAGACGATTACCCGCGATTGTCTCAGTGCACTCAACTTTCGCACTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CTGCCCGGAACCGGACGACATTTGCGTCAAGCTGACAGAGCGACGCGGCGGTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAACCCCATAA-ACAAAT---------------------GAA----T---C-CCGCTTTCAGCCAGGGAAACCATCACTCGTGACTGCCTTAGCGCGCTAAGCTTCCGCAAAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GC....................................................................................................................2116540.006540175152512098250970
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-G.....................................................................................................................2012157.00215720871591248412870
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCT...................................................................................................................2212101.002101329141561358898219
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCA................................................................................................................251859.008591482121218285193
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTC..................................................................................................................231839.008392197166719321667
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCC.................................................................................................................241391.00391207310095760
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTT..................................................................................................................231184.0018424060445555
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAACC............................................................................................................291177.0017714250015015
.....................................................................................................A-ACAAAT---------------------GAA----T---C-CCGCTTTCAG...................................................221169.0016963631416670
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAA...............................................................................................................261157.001571262101297
..................................................GTAAGCGGAAT---------T-----CCTTT--G........................................................................................................................181131.00131704071130
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GT....................................................................................................................211118.0011816013049400
.....................................................................................................A-ACAAAT---------------------GAA----T---C-CCGCTTTCA....................................................211101.001012321513570
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-......................................................................................................................191101.0010114112035390
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAAC.............................................................................................................28194.00945921010715
.......................................................................................................ACAAAT---------------------GAA----T---C-CCGCTTTCAGT..................................................22184.00842875114290
.......................................................................................................ACAAAT---------------------GAA----T---C-CCGCTTTCAG...................................................21155.0055213201280
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-T.....................................................................................................................20155.0055104214340
.......................................................................................................ACAAAT---------------------GAA----T---C-CCGCTTTCA....................................................20150.005080304350
........................................................................................................CAAAT---------------------GAA----T---C-CCGCTTTCAGT..................................................21141.0041114617120
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAA..............................................................................................................27139.003932010411
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GA....................................................................................................................21137.003710107280
.......................................................................................................ACAAAT---------------------GAA----T---C-CCGCTTTCAGA..................................................22127.002718101070
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTA..................................................................................................................23125.002500107161
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCT.................................................................................................................24122.00228010490
........................................................................................................CAAAT---------------------GAA----T---C-CCGCTTTCAGA..................................................21122.002214310040
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCT................................................................................................................25121.00218020830
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GC....................................................................................................................20120.002017000120
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCT...................................................................................................................21120.002019000010
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTTT.................................................................................................................24118.001810104120
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAACCCCA.........................................................................................................32117.001700000017
...................................................TAAGCGGAAT---------T-----CCTTT--GT-G.....................................................................................................................19117.001715000020
..................................................GTAAGCGGAAT---------T-----CCTTT--T........................................................................................................................18116.001600000160
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTC..................................................................................................................22114.001412100100
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCC...................................................................................................................22113.00130810220
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTCC.................................................................................................................23112.001212000000
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAACC............................................................................................................28111.001111000000
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCA...................................................................................................................22110.00102020240
........................................................................................................CAAAT---------------------GAA----T---C-CCGCTTTCAG...................................................20110.00104100140
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAACT............................................................................................................2919.0097000200
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-TT....................................................................................................................2119.0090010440
.....................................................................................................A-ACAAAT---------------------GAA----T---C-CCGCTTTCAGT..................................................2318.0083000140
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAAC.............................................................................................................2717.0077000000
........................................................................................................CAAAT---------------------GAA----T---C-CCGCTTTCAGTT.................................................2217.0072000140
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTCCAA...............................................................................................................2517.0077000000
..................................................GTAAGCGGAAT---------T-----CCTTT--GC-......................................................................................................................1916.0061000230
.....................................................................................................A-ACAAAT---------------------GAA----T---C-CCGCTTTC.....................................................2016.0062000130
..........................................................................................CAAACCCCATAA-ACAAAT---------------------GAA----T---C-CCGCT........................................................2816.0060000060
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAT..............................................................................................................2715.0052000012
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCTT...............................................................................................................2615.0055000000
....................................................AAGCGGAAT---------T-----CCTTT--GT-GC....................................................................................................................1915.0051000040
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCTT................................................................................................................2514.0042000110
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCC................................................................................................................2514.0042000020
..........................................................................................CAAACCCCATAA-ACAAAT---------------------GAA----T---C-CCG..........................................................2614.0042000020
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCA.................................................................................................................2414.0041000120
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTG..................................................................................................................2314.0040000220
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCG................................................................................................................2514.0040000022
.......................................................................................................ACAAAT---------------------GAA----T---C-CCGCTTTCAGC..................................................2214.0040400000
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAT...............................................................................................................2613.0033000000
...................................................................................................TAA-ACAAAT---------------------GAA----T---C-CCGCTTTCA....................................................2313.0030000030
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCG...................................................................................................................2213.0030000210
.........................................................................................................AAAT---------------------GAA----T---C-CCGCTTTCAGA..................................................2013.0032000010
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GAA...................................................................................................................2213.0030000120
....................................................................................................AA-ACAAAT---------------------GAA----T---C-CCGCTTTCAG...................................................2313.0033000000
........................................................................................................CAAAT---------------------GAA----T---C-CCGCTTTCA....................................................1913.0030000030
.......................................................................................................ACAAAT---------------------GAA----T---C-CCGCTTTC.....................................................1913.0030000030
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-C.....................................................................................................................2013.0030010200
....................................................AAGCGGAAT---------T-----CCTTT--GT-GCTC..................................................................................................................2113.0031100100
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTCCA................................................................................................................2413.0033000000
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-A.....................................................................................................................2012.0020000200
.....................................................................................................A-ACAAAT---------------------GAA----T---C-CCGCTTT......................................................1912.0020000020
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GT....................................................................................................................2012.0022000000
.....................................................AGCGGAAT---------T-----CCTTT--GT-GCT...................................................................................................................1912.0021000010
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAAA.............................................................................................................2812.0022000000
...................................................TAAGCGGAAT---------T-----CCTTT--GT-......................................................................................................................1812.0022000000
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTTA.................................................................................................................2412.0020000110
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GG....................................................................................................................2112.0021010000
.....................................................................................................A-ACAAAT---------------------GAA----T---C-CCGCTTTCAT...................................................2212.0020010010
.........................................................................................................AAAT---------------------GAA----T---C-CCGCTTTCAG...................................................1912.0022000000
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAAAT.............................................................................................................2812.0020000101
...................................................TAAGCGGAAT---------T-----CCTTT--GT-GCTCT.................................................................................................................2312.0022000000
....................................................AAGCGGAAT---------T-----CCTTT--GT-GCT...................................................................................................................2012.0020000110
....................................................................................................AA-ACAAAT---------------------GAA----T---C-CCGCTTTCA....................................................2211.0010000010
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GTG...................................................................................................................2211.0010000010
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCCAG...............................................................................................................2611.0010000010
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTGT.................................................................................................................2411.0010100000
..................................................GTAAGCGGAAT---------T-----CCTTT--GT-GCTCTTT...............................................................................................................2611.0011000000
.........................................................................................CCAAACCCCATAA-ACAAAT---------------------GAA----T---C-CC...........................................................2611.0011000000
.....................................................AGCGGAAT---------T-----CCTTT--GT-GCTC..................................................................................................................2011.0011000000
droYak3
CTGCCCTGAACCGGACGACATATGCGTCAAGCTGACGGAGCGACGCGGCGGTAAGCGGAAA---------T-----CCGTT--GT-GATCCGAACCTCAAAA-TCAATT---------------------GAA----A---C-TCGCTTACAGCCAGGGAAACCATCACCCGTGACTGCCTTAGCGCGCTGAGCTTCCGCAAAGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................................................................CGCTTACAGCCAGGGAAACCATCACC..................................2611.00101000000000
.......GAACCGGACGACATATGCGTC................................................................................................................................................................................2111.00101000000000
........................................................GGAAA---------T-----CCGTT--GT-GATCCGAACC............................................................................................................2311.00100100000000
droSec2
CTGCCCGGAACCGGACGACATTTGCGTCAAAGTGACGGAACGACGCGGCGGTAAGCGGAAA---------A-----CCTCT--GT-GATCCGAGCTCCATTA-ACAAAT---------------------GTT----A---C-TCGCTTTTAGCCAGGGAAACAATCACACGTGACTGCCTCAGCGCGCTGAGCTTCCGCAAAGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..............................AGTGACGGAACGACGCGGCG..........................................................................................................................................................2011.0010010
droSim2
CTGCCCGGAACCGGACGACATTTGCGTCAAGGTGACGGAACGACGCGGCGGTAAGCGGAAA---------A-----CCTTT--GT-GATCCGAGCTCCATAA-ACAAAT---------------------AAA----A---C-TCGCTTTCAGCCAGGGAAACAATCACACGTGACTGCCTTAGCGCGCTGAGCTTCCGCAAAGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................AAGGTGACGGAACGACGCGGCGCC........................................................................................................................................................2413.00300300000000000000
................GACATTTGCGTCAAGGTGACGGAAC...................................................................................................................................................................2512.00200200000000000000
......................TGCGTCAAGGTGACGGAACGA.................................................................................................................................................................2111.00100000100000000000
....................................................AAGCGGAAA---------A-----CCTTT--GT-GATC..................................................................................................................2111.00101000000000000000
...................................CGGAACGACGCGGCGGTAAG.....................................................................................................................................................2011.00100000001000000000
.....CGGAACCGGACGACATTTGCGTT................................................................................................................................................................................2311.00100000000000001000
..............................................................................................................................................................GAAACAATCACACGTGACTGCC........................2211.00100000000000001000
.......................................................................................................................................................................ACACGTGACTGCCTTAGCGCGCTGAGCT.........2811.00101000000000000000
..............ACGACATTTGCGTCAAGGTGACGGAAC...................................................................................................................................................................2711.00101000000000000000
.....................................................................................................................................................................................TAGCGCGCTGAGCTTCCGCAA..2111.00100001000000000000
......................TGCGTCAAGGTGACGGAACGACGCGGC...........................................................................................................................................................2711.00100000000001000000
dm3
CTGCCCGGAACCGGACGACATTTGCGTCAAGGTGACGGAGCGACGCGGCGGTAAGCGGAAA---------T-----CCTCT--GT-TATCCGAGCTTCATTA-ACAAAT---------------------GAA----A---C-TCGCTTTTAGCCAGGGAAACAATCACACGTGACTGCCTAAGCGCGCTGAGCTTCCGCAAAGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.........................................................................................................................................................CCAGGGAAACAATCACACGTG..............................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAGT..........2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGCCCGGAACCGGACGACATT......................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGGTGACGGAGCGACGCGGCGCC........................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAGCTTC.......2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAGGTGACGGAGCGACGCGGC...........................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000001000000000000
..............ACGACATTTGCGTCAAGGTGA.........................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GCTTTTAGCCAGGGAAACAAT......................................2113.003000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
......GGAACCGGACGACATTTGCGT.................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000
................................TGACGGAGCGACGCGGCG..........................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................AAGGTGACGGAGCGACGCGG............................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000
......................TGCGTCAAGGTGACGGAGCGACGCGG............................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACCGGACGACATTTGCGTCAAGGTGACGGA.....................................................................................................................................................................3012.002000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TATCCGAGCTTCATTA-ACAAAT---------------------GA........................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAGCTT........2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................CAAGGTGACGGAGCGACGCGG............................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................GTGACTGCCTAAGCGCGCTGA............2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................ACACGTGACTGCCTAAGCGCG................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000
..............................................................................................................................................................................ACTGCCTAAGCGCGCTGAGCT.........2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000
...........CGGACGACATTTGCGTCAAGGTGAC........................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACGTGACTGCCTAAGCGCGCT..............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.............................AGGTGACGGAGCGACGCGGCGC.........................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................AAGGTGACGGAGCGACGCG.............................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................TGACGGAGCGACGCGGCGGTAAGCGG..................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......GAACCGGACGACATTTGCGTCAAGG............................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CATTTGCGTCAAGGTGACGGA.....................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGGTGACGGAGCGACGCGGCG..........................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................TGCGTCAAGGTGACGGAGCGACGCGGCG..........................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAG...........2111.001000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CTGCCTAAGCGCGCTGAGCT.........2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATCCGAGCTTCATTA-ACA..................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GTGACGGAGCGACGCGGCG..........................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................TTTTAGCCAGGGAAACAATC.....................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................CTGCCTAAGCGCGCTGAGCTT........2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CAGGGAAACAATCACACGTGA.............................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................CGGCGGTAAGCGGAAA---------T-----CCTG............................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................................................CTAAGCGCGCTGAGCTTCCGC....2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.........ACCGGACGACATTTGCGTCAAGGTGACGG......................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CGCTTTTAGCCAGGGAAACAA.......................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTTGCGTCAAGGTGACGGAGC...................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................AAT---------------------GAA----A---C-TCGCTTTTAGCCA................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GACTGCCTAAGCGCGCTGAGCTA........2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................A-ACAAAT---------------------GAA----A---C-TCGCTTTTA....................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................TATCCGAGCTTCATTA-ACA..................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GCGCGCTGAGCTTCCGCAAAG2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
......................................................................................TATCCGAGCTTCATTA-ACAAAT---------------------GAA----A---...............................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GACGACATTTGCGTCAAGGTGACGGAG....................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................ATTTGCGTCAAGGTGACGGAGCGACGC..............................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAAGGTGACGGAGCGACGCGGT...........................................................................................................................................................2211.001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGACATTTGCGTCAAGGTGACGGAGCG..................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAGCTTCC......2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................AGCGCGCTGAGCTTCCGCAC..2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AACAATCACACGTGACTGCCTAAGCGCGC...............2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AATCACACGTGACTGCCTAAG....................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CTCT--GT-TATCCGAGCTTCATT.......................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GACATTTGCGTCAAGGTGACG.......................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................CACACGTGACTGCCTAAGCG..................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTCAAGGTGACGGAGCGAC................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TAAGCGCGCTGAGCTTCCGCC...2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................AAGGTGACGGAGCGACGCGGCG..........................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................GACATTTGCGTCAAGGTGACGGAGC...................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........CCGGACGACATTTGCGTCA...............................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGGTGACGGAGCGACGCGG............................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................ACATTTGCGTCAAGGTGACGGT.....................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........CGGACGACATTTGCGTCAAGGT...........................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGACATTTGCGTCAAGGTGACGGAG....................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........CGGACGACATTTGCGTCAAGGA...........................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATTA-ACAAAT---------------------GAA----A---C-TCGCTTTTAG...................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAGCT.........2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................AGGTGACGGAGCGACGCGGC...........................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
........AACCGGACGACATTTGCGTCA...............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................CACGTGACTGCCTAAGCGCGC...............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GACGACATTTGCGTCAAGGTG..........................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................TCGCTTTTAGCCAGGGAAAC.........................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
CTGCCCGGAACCGGACGACAT.......................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCGGACGACATTTGCGTCAAG.............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TCGCTTTTAGCCAGGGAAACA........................................2111.001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACCGGACGACATTTGCG..................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................TGACTGCCTAAGCGCGCTGAGC..........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CTAAGCGCGCTGAGCTTCCG.....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGACATTTGCGTCAAGGTGACGGA.....................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTTGCGTCAAGGTGACGGAGCG..................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................ACAATCACACGTGACTGCCTAAGCGCGCT..............2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............GGACGACATTTGCGTCAAGGT...........................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................GTGACTGCCTAAGCGCGCTGAGCTTCC......2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEug1
CTGCCCAGAACCCGACGATATTTGCGTCAAGGTGACAGAGCGCCGAGGCGGTAAGCGGAAA---------T-----CCTTT--GA-ATTT------------AACATGTGCCCTAA-----------------ACGA--AAA-TCTTTTACAGCCAGGGAAACGATCACCCGCGATTGCCTCAGTGCACTAAACTTCCGTAAGGSizeHit CountTotal NormTotal
No Reads
droBia1
CTGCCCAGAGCCAAACGACATCTGCGTCAAGGTGATCGAGCAACGCGGCGGTAAGCAGGAG---------T-----TCTAT--CT-GTTT------------GTCGCGTTTTTTAA-----------------ACCC--GTA-TCCGTTTCAGCCCAAGAAACCATTACTCGCGAGTGCCTCAGCGCCCTGAGCTTCCGCAAGGSizeHit CountTotal NormTotal
No Reads
droTak1
CTGCCCGGAACCCGATGACATCTGCGTCAAGGTGACCGAGCGACGCGGCGGTAAGCAGAGA---------T-----CCTTT--AT-TATT------------TCCGCGTGACTTGA-----------------AACC--AAA-TCCCTTTTAGCCAGGGAAACCATCACTCGCGACTGCCTCAGCGCCCTGAGCTTCCGCAAGGSizeHit CountTotal NormTotal
No Reads
droEle1
CTGCCCAGAACCCAACGACATTTGTGTCAAGGTGACTGAGAGACGCGGCGGTAAGTGGAAA---------T-----CCCTT--AT-A---------------AGCACGTGACATAGACTCAAGTCCTAA----TCCC---AA-TTCCTTTCAGCCATGGAAACAATCACCCGCGATTGCCTCAGCGCACTGAGCTTCCGCAAGGSizeHit CountTotal NormTotal
No Reads
droRho1
CTGCCCGGAACCGGACGATATTTGCGTCAAGCTGACGGAGCGACGCGGCGGTAAGCAGGAA---------T-----CCCTT--CG-A---------------ACCACGTGACCTGGCCCAAAACCCTAATC-----C--AAA-TCCCTTCCAGGCAGTGAAACAATAACCCGCGATTGTCTCAGCGCCCTGAACTTCCGTAAAGSizeHit CountTotal NormTotal
No Reads
droFic1
CTGCCCGGAGCCAAACGACATATGCGTTAAAGTGACCGAAAGACGCGGCTGTAAGTGAGAT---------T-----TG-----GT-CGCCCCA---------ATCACATGACCTAA-----------------ATTC--GAATCCCTTTTCAGCTAGGGAAACAATTACCCGCGATTGCCTTAGCGCCCTGAACTTCCGCAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
CTGCCCAGAACCAAACGACATCTGCGTGAAGGTGACAGAGCGACGCGGCGGTAAGTCCACGCCTCCTTATT-------------TACTCC------------AGCACGTGTCTTGA-----------------TTCCAAGAA-TCCCTTGCAGCCCAGGAGACCATTACACGCGATTGCCTTAGCGCCTTGAGCTTCCGCAAGGSizeHit CountTotal NormTotal
No Reads
droAna3
GTGCCCTGAGCCGGATGACATCTGCGTCAAAGTTACTGAGCGAAGAGGAGGTAAGTGGATGGGGTGGGGGCTGTATTAGA-CA--GATCT------------TTCACGTGGCTTTG-----------------TCTC--AA--ACCCTTCCAGCTCGGGAGACCATCACGCGCGAATGCTTGAGCGCCCTCAACTTCCGCACCGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..............................................GGAGGTAAGTGGATGGGGGCC.........................................................................................................................................2140.251000001
droBip1
GTGCCCCGAACCGGATGACATCTGCGTCAAAGTGACGGAGCGAAGAGGGGGTAAGTGGTTGGGGCTGGGGTTATATCAGA-TA--GACCT------------TTCACGTGGCTTTG-----------------TCTG---AA-AACCTTTCAGCTCGGGAGACCATCACCCGTGAGTGCCTGAGCGCCCTGAACTTCCGCCGCGSizeHit CountTotal NormTotal
No Reads
dp5
GTGCCCGGAGCCCAACGATATCTGCGTTAAAGTGACGGAACGCCGCGGCTGTAAGTGGGTC---------T-----AAGGC--TC-GACAGGAGCTTCATAT-TTATGTGGCTTTT-----------------C-------T-TCGATTTCAGCAAAGGAAACGATAACACGTGACTGCCTAAGTGCCCTCAGCTTCCGAACAGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................................................................GATAACACGTGACTGCCTAA.....................2011.0010000000001
..............................AGTGACGGAACGCCGCGGCTCA........................................................................................................................................................2211.0010100000000
droPer2
GTGCCCGGAGCCCAACGATATCTGCGTTAAAGTGACGGAACGCCGCGGCTGTAAGTGGGTC---------T-----AAGGC--TC-GACAGGAGCTTCATAT-TTATGTGGCTTTT-----------------C-------T-TCGATTTCAGCAAAGGAAACGATAACACGTGACTGCCTAAGTGCCCTCAGCTTCCGAACAGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................GTGACGGAACGCCGCGGC...........................................................................................................................................................1811.001010000
droWil2
ATGCCCAGAGCCCAATGATATATGCGTGAAAGTCACAGAACGCCGAGGAGGTAAGACGAAA---------T-----ACAGC--AT-GTTGATAACACTCAAA-TTGATT---------------------TAAATTT--G-T-TAAATTGCAGCCCAAGAGACCATCACACGAGATTGTCTTAGTGCCTTGAGTTTCCGCACGGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................GCCCAAGAGACCATCACACGA...............................2111.00100010
......AGAGCCCAATGATATATGCGT.................................................................................................................................................................................2111.00100100
.......................................................................................................................................................AGCCCAAGAGACCATCAC...................................1811.00100010
droVir3
ATGTCCTGAGAGCAACGACATTTGCGTAAAAGTGACCGAGCGACGCGG-------------------------------------------------------------------------------------------------------AGCCAAGGAGACCATAACCCGCGATTGTCTTAGTGCGCTCAGCTTTCGCACAGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................TGCGTAAAAGTGACCGAGCGACG...............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001
.......GAGAGCAACGACATTTGCGTAA...............................................................................................................................................................................2211.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
ATGTCCTGAGAGCAACGAC.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................ACCCGCGATTGTCTTAGT...................1811.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................AACCCGCGATTGTCTTAGTG..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
droMoj3
GTGCCCCGAGAGCAACGACATCTGCGTCAAGGTGACGGAGCGGCGTGG-------------------------------------------------------------------------------------------------------AGCCAAGGAGACAATAACAAGGGATTGCCTCAGCGCACTTAACTTCCGCACCGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..............................GGTGACGGAGCGGCGTGG-------------------------------------------------------------------------------------------------------AGCC.................................................2211.001000100
......................................................................................................................................................................AACAAGGGATTGCCTCAGCGCACTT.............2511.001100000
droGri2
GTGTCCCGAGACCAACGATATCTGCGTCAAGGTGACGGAGAGACGCGGC-------------------------------------------------------------------------------------------------------GCCAAGGAGACGATTACCCGCGATTGTCTCAGTGCACTCAACTTTCGCACTGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 07:25 PM