ID:

der_20

 Coordinate:

scaffold_4784:22312293-22312357 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.9 -27.2

Flybase annnotation

utr3 [utr3_minus_6535]

No Repeatable elements found

Sense Strand Reads

GTGTTCTGAGTTATCCTTGAGGATTGTCTACGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTTACATCAAACCCGACCCGTCTACCAGTGCCATTTCAA

***********************************((.(((...((((.(((((((((((.(((....(((((.((............)))))))....))))))))))))))))))...)))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 M057

embryo

 V107

male body		 V108

head

 V040

embryo

 V060

head

 GSM1528801

follicle cells
............................................................................................TGAGATTCTTCTATTCTACTTT................................................... 22 0 1 435342.00 435342 276501 157409 762 267 334 67 2
............................................................................................TTAGATTCTTCTATTCTACTTT................................................... 22 1 1 48508.00 48508 1363 47135 5 5 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTT.................................................... 21 0 1 33163.00 33163 29268 3662 154 44 29 6 0
.............................................................................................GAGATTCTTCTATTCTACTTT................................................... 21 0 1 21683.00 21683 21330 353 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACA............................................................................................ 23 0 1 13460.00 13460 4955 325 5888 1281 998 13 0
............................................................................................TGAGATTCTTCTATTCTACTTC................................................... 22 1 1 10569.00 10569 79 10490 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACTTC................................................... 22 2 1 3075.00 3075 0 3075 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACT..................................................... 20 0 1 2662.00 2662 2365 128 127 31 9 2 0
............................................................................................TGATATTCTTCTATTCTACTTT................................................... 22 1 1 2276.00 2276 496 1776 0 1 3 0 0
............................................................................................TGCGATTCTTCTATTCTACTTT................................................... 22 1 1 2243.00 2243 18 2223 0 0 2 0 0
.............................................................................................GAGATTCTTCTATTCTACTT.................................................... 20 0 1 2151.00 2151 2145 6 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCAC............................................................................................. 22 0 1 2010.00 2010 862 73 435 386 248 6 0
...........................................................................................CTGAGATTCTTCTATTCTACTTT................................................... 23 1 1 2005.00 2005 681 1321 1 0 2 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTT.................................................. 23 1 1 1598.00 1598 1363 228 3 3 1 0 0
..............................................................................................AGATTCTTCTATTCTACTTT................................................... 20 0 1 1533.00 1533 1449 84 0 0 0 0 0
............................................................................................TGAGATTATTCTATTCTACTTT................................................... 22 1 1 1417.00 1417 677 733 0 7 0 0 0
............................................................................................TGAGTTTCTTCTATTCTACTTT................................................... 22 1 1 1385.00 1385 65 1319 0 0 0 1 0
............................................................................................TGAGCTTCTTCTATTCTACTTT................................................... 22 1 1 1271.00 1271 1227 40 1 1 2 0 0
............................................................................................TTAGATTCTTCTATTCTACTT.................................................... 21 1 1 1258.00 1258 156 1101 1 0 0 0 0
............................................................................................TGAGATTCTTATATTCTACTTT................................................... 22 1 1 1219.00 1219 659 556 0 0 4 0 0
............................................................................................TGAGATTCTTCTATTCTCCTTT................................................... 22 1 1 1207.00 1207 1200 5 0 0 1 0 1
............................................................................................TGAGATTCTTCTATTCTACTGT................................................... 22 1 1 1160.00 1160 1066 94 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCA.............................................................................................. 21 0 1 1030.00 1030 465 2 477 72 9 5 0
............................................................................................TAAGATTCTTCTATTCTACTTT................................................... 22 1 1 987.00 987 188 797 1 0 1 0 0
............................................................................................TGAGATTCTTCTATTTTACTTT................................................... 22 1 1 943.00 943 573 369 0 1 0 0 0
............................................................................................TCAGATTCTTCTATTCTACTTT................................................... 22 1 1 799.00 799 94 704 0 1 0 0 0
............................................................................................TGAGATTCTTCTCTTCTACTTT................................................... 22 1 1 734.00 734 17 715 1 0 1 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTA.................................................. 23 1 1 702.00 702 666 32 4 0 0 0 0
............................................................................................TGAGAGTCTTCTATTCTACTTT................................................... 22 1 1 644.00 644 92 551 0 0 1 0 0
............................................................................................TTCGATTCTTCTATTCTACTTT................................................... 22 2 1 587.00 587 0 587 0 0 0 0 0
............................................................................................CGAGATTCTTCTATTCTACTTT................................................... 22 1 1 544.00 544 311 232 0 1 0 0 0
............................................................................................GGAGATTCTTCTATTCTACTTT................................................... 22 1 1 506.00 506 253 252 0 0 1 0 0
............................................................................................TGGGATTCTTCTATTCTACTTT................................................... 22 1 1 451.00 451 347 102 1 0 1 0 0
............................................................................................AGAGATTCTTCTATTCTACTTT................................................... 22 1 1 447.00 447 271 176 0 0 0 0 0
............................................................................................TGAGATTTTTCTATTCTACTTT................................................... 22 1 1 430.00 430 368 61 0 0 0 1 0
............................................................................................TGACATTCTTCTATTCTACTTT................................................... 22 1 1 425.00 425 403 22 0 0 0 0 0
....................................................TAGAATAGCAGGCTTATCACA............................................................................................ 21 0 1 396.00 396 73 19 208 35 60 1 0
............................................................................................TTAGTTTCTTCTATTCTACTTT................................................... 22 2 1 386.00 386 0 386 0 0 0 0 0
............................................................................................TGAGATTCCTCTATTCTACTTT................................................... 22 1 1 384.00 384 152 232 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACCTT................................................... 22 1 1 381.00 381 93 287 1 0 0 0 0
............................................................................................TGAGATTCTTCCATTCTACTTT................................................... 22 1 1 372.00 372 254 117 0 0 1 0 0
..................................................AGTAGAATAGCAGGCTTATC............................................................................................... 20 0 1 358.00 358 124 15 141 58 17 3 0
............................................................................................TTATATTCTTCTATTCTACTTT................................................... 22 2 1 334.00 334 2 332 0 0 0 0 0
...................................................GTAGAATAGCAGGCTTATCACA............................................................................................ 22 0 1 328.00 328 324 0 2 1 1 0 0
............................................................................................TTAGATTATTCTATTCTACTTT................................................... 22 2 1 322.00 322 0 322 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACGTT................................................... 22 1 1 285.00 285 242 42 0 0 1 0 0
............................................................................................TGAAATTCTTCTATTCTACTTT................................................... 22 1 1 278.00 278 244 32 0 0 2 0 0
............................................................................................TTAGATTCTTCTCTTCTACTTT................................................... 22 2 1 274.00 274 0 274 0 0 0 0 0
...........................................................................................ATGAGATTCTTCTATTCTACTTT................................................... 23 1 1 265.00 265 258 7 0 0 0 0 0
..............................................................................................TGATTCTTCTATTCTACTTT................................................... 20 1 1 253.00 253 245 8 0 0 0 0 0
............................................................................................GTAGATTCTTCTATTCTACTTT................................................... 22 2 1 245.00 245 1 244 0 0 0 0 0
............................................................................................TGAGATTCTTCTACTCTACTTT................................................... 22 1 1 245.00 245 152 91 0 1 1 0 0
............................................................................................TTAGATTCTTATATTCTACTTT................................................... 22 2 1 234.00 234 6 228 0 0 0 0 0
...........................................................................................TTGAGATTCTTCTATTCTACTTT................................................... 23 1 1 232.00 232 225 7 0 0 0 0 0
...........................................................................................GTGAGATTCTTCTATTCTACTTT................................................... 23 0 1 230.00 230 230 0 0 0 0 0 0
............................................................................................CTAGATTCTTCTATTCTACTTT................................................... 22 2 1 226.00 226 1 225 0 0 0 0 0
...............................................................................................GATTCTTCTATTCTACTTT................................................... 19 0 1 218.00 218 189 29 0 0 0 0 0
..................................................ATTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 214.00 214 37 91 72 9 5 0 0
............................................................................................TGAGATTCTTCTATCCTACTTT................................................... 22 1 1 203.00 203 139 59 4 1 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTG.................................................. 23 1 1 188.00 188 187 1 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTTCTTT................................................... 22 1 1 181.00 181 86 95 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCGACTTT................................................... 22 1 1 180.00 180 109 71 0 0 0 0 0
...........................................................................................CGGAGATTCTTCTATTCTACTTT................................................... 23 2 1 180.00 180 1 179 0 0 0 0 0
............................................................................................TGAGATTCTTCTAGTCTACTTT................................................... 22 1 1 179.00 179 149 30 0 0 0 0 0
............................................................................................TGAGACTCTTCTATTCTACTTT................................................... 22 1 1 177.00 177 121 55 0 0 1 0 0
............................................................................................TGCGATTCTTCTATTCTACTTC................................................... 22 2 1 174.00 174 0 174 0 0 0 0 0
............................................................................................TGAGGTTCTTCTATTCTACTTT................................................... 22 1 1 173.00 173 112 59 1 0 1 0 0
............................................................................................ATAGATTCTTCTATTCTACTTT................................................... 22 2 1 168.00 168 1 167 0 0 0 0 0
............................................................................................TGAGATTCTTTTATTCTACTTT................................................... 22 1 1 151.00 151 97 54 0 0 0 0 0
.............................................................................................GAGCTTCTTCTATTCTACTTT................................................... 21 1 1 146.00 146 146 0 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTACT..................................................... 19 0 1 144.00 144 143 1 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTA................................................... 22 1 1 140.00 140 83 57 0 0 0 0 0
............................................................................................TGAGATTCTCCTATTCTACTTT................................................... 22 1 1 139.00 139 60 77 0 1 1 0 0
............................................................................................TGAGATTCTTCTATTCTATTTT................................................... 22 1 1 138.00 138 25 111 1 1 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTG.................................................... 21 1 1 134.00 134 134 0 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTTTACTTT................................................... 22 2 1 132.00 132 2 130 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTCCTT.................................................... 21 1 1 126.00 126 126 0 0 0 0 0 0
............................................................................................TGAGATTGTTCTATTCTACTTT................................................... 22 1 1 126.00 126 105 21 0 0 0 0 0
............................................................................................TGAGATTCTTCTGTTCTACTTT................................................... 22 1 1 123.00 123 92 30 0 0 0 1 0
.............................................................................................GAGATTCTTCTATTCTACTTTT.................................................. 22 1 1 122.00 122 122 0 0 0 0 0 0
................................................................................................ATTCTTCTATTCTACTTT................................................... 18 0 1 122.00 122 96 26 0 0 0 0 0
............................................................................................TGATATTCTTCTATTCTACTTC................................................... 22 2 1 121.00 121 0 121 0 0 0 0 0
.............................................................................................TAGATTCTTCTATTCTACTTT................................................... 21 1 1 121.00 121 110 11 0 0 0 0 0
.............................................................................................GAGATTATTCTATTCTACTTT................................................... 21 1 1 120.00 120 120 0 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTAGTTT................................................... 22 1 1 117.00 117 111 6 0 0 0 0 0
............................................................................................TGAGATTCTTCGATTCTACTTT................................................... 22 1 1 117.00 117 114 3 0 0 0 0 0
.............................................................................................GATATTCTTCTATTCTACTTT................................................... 21 1 1 117.00 117 117 0 0 0 0 0 0
............................................................................................TGAGAATCTTCTATTCTACTTT................................................... 22 1 1 114.00 114 83 31 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTAT................................................................................................ 19 0 1 113.00 113 38 0 62 10 3 0 0
...........................................................................................CTGAGATTCTTCTATTCTACTT.................................................... 22 1 1 108.00 108 76 32 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCCACTTT................................................... 22 1 1 107.00 107 74 33 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTAC...................................................... 19 0 1 105.00 105 56 29 5 2 13 0 0
............................................................................................TGAGATCCTTCTATTCTACTTT................................................... 22 1 1 104.00 104 65 37 1 0 1 0 0
.........................................................................TGTTCCATTCAATCTGCTG......................................................................... 19 0 1 103.00 103 61 7 1 3 31 0 0
............................................................................................TGAGATTCTTCTAATCTACTTT................................................... 22 1 1 99.00 99 68 30 0 1 0 0 0
............................................................................................TTAGATTCTTCTATTCTACCTT................................................... 22 2 1 99.00 99 1 98 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTAA................................................. 24 2 1 98.00 98 93 5 0 0 0 0 0
............................................................................................TGAGATTCTTATATTCTACTT.................................................... 21 1 1 97.00 97 88 9 0 0 0 0 0
............................................................................................TGAGATTCTTCTTTTCTACTTT................................................... 22 1 1 95.00 95 65 30 0 0 0 0 0
............................................................................................TGAGATGCTTCTATTCTACTTT................................................... 22 1 1 95.00 95 8 87 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTACTTG................................................... 21 1 1 93.00 93 92 1 0 0 0 0 0
............................................................................................TGAGATTATTCTATTCTACTT.................................................... 21 1 1 92.00 92 75 16 0 1 0 0 0
............................................................................................TGAGATTCTTCTATTCTGCTTT................................................... 22 1 1 90.00 90 38 52 0 0 0 0 0
............................................................................................TGAGCTTCTTCTATTCTACTT.................................................... 21 1 1 90.00 90 88 0 1 1 0 0 0
............................................................................................TGAGATTCTTCAATTCTACTTT................................................... 22 1 1 89.00 89 78 11 0 0 0 0 0
............................................................................................TGAGATTCTTATATTCTACTGT................................................... 22 2 1 89.00 89 89 0 0 0 0 0 0
..............................................................................................AGATTCTTCTATTCTACTT.................................................... 19 0 1 88.00 88 85 3 0 0 0 0 0
............................................................................................TGAGATTCTGCTATTCTACTTT................................................... 22 1 1 88.00 88 63 25 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACT..................................................... 20 1 1 83.00 83 27 56 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACTTTT.................................................. 23 2 1 82.00 82 6 76 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTG................................................... 22 1 1 82.00 82 68 14 0 0 0 0 0
............................................................................................TGAGTTTCTTCTATTCTACTTC................................................... 22 2 1 82.00 82 0 82 0 0 0 0 0
...........................................................................................CTGAGATTCTTCTATTCTACTTC................................................... 23 2 1 77.00 77 0 77 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTTTACTT.................................................... 21 1 1 77.00 77 68 9 0 0 0 0 0
.............................................................................................GGGATTCTTCTATTCTACTTT................................................... 21 1 1 75.00 75 43 32 0 0 0 0 0
............................................................................................TGAGATTCATCTATTCTACTTT................................................... 22 1 1 73.00 73 65 8 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTCT................................................... 22 1 1 73.00 73 27 44 1 0 1 0 0
............................................................................................TGAGATTCTTCTATGCTACTTT................................................... 22 1 1 72.00 72 70 2 0 0 0 0 0
............................................................................................TGATATTCTTCTATTCTACTT.................................................... 21 1 1 72.00 72 41 31 0 0 0 0 0
............................................................................................TGCGATTCTTCTATTCTACTT.................................................... 21 1 1 70.00 70 2 68 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTC.................................................... 21 1 1 69.00 69 2 67 0 0 0 0 0
............................................................................................TGAGATTCTTCTATACTACTTT................................................... 22 1 1 68.00 68 42 25 0 0 1 0 0
.............................................................................................GAGATTCTTCTATTCTACTTTA.................................................. 22 1 1 68.00 68 67 1 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTAATTT................................................... 21 1 1 67.00 67 67 0 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTC.................................................. 23 0 1 67.00 67 56 11 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCGACTGT................................................... 22 2 1 66.00 66 66 0 0 0 0 0 0
.............................................................................................GAGATTCTTCTTTTCTACTTT................................................... 21 1 1 66.00 66 66 0 0 0 0 0 0
...................................................GTAGAATAGCAGGCTTATCAC............................................................................................. 21 0 1 62.00 62 62 0 0 0 0 0 0
...........................................................................................CTGTGATTCTTCTATTCTACTTT................................................... 23 2 1 62.00 62 0 62 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTTTACTGT................................................... 22 2 1 62.00 62 62 0 0 0 0 0 0
............................................................................................TGAGATACTTCTATTCTACTTT................................................... 22 1 1 61.00 61 54 7 0 0 0 0 0
..................................................AGCAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 60.00 60 4 35 14 5 2 0 0
............................................................................................TGAGATTCTACTATTCTACTTT................................................... 22 1 1 60.00 60 33 27 0 0 0 0 0
............................................................................................TGAGATTCTTATATTCTACTTC................................................... 22 2 1 57.00 57 12 45 0 0 0 0 0
..........................................................................................TCTGAGATTCTTCTATTCTACTTT................................................... 24 1 1 57.00 57 2 55 0 0 0 0 0
............................................................................................TGAGATTATTCTCTTCTACTTT................................................... 22 2 1 56.00 56 0 56 0 0 0 0 0
............................................................................................TTAGATTCTTCCATTCTACTTT................................................... 22 2 1 56.00 56 0 56 0 0 0 0 0
............................................................................................TTAGAGTCTTCTATTCTACTTT................................................... 22 2 1 54.00 54 0 54 0 0 0 0 0
............................................................................................TGTGATTCTTCTATTCTACTTT................................................... 22 1 1 54.00 54 44 10 0 0 0 0 0
....................................................TAGAATAGCAGGCTTATCAC............................................................................................. 20 0 1 53.00 53 10 5 8 6 24 0 0
.............................................................................................GAGTTTCTTCTATTCTACTTT................................................... 21 1 1 53.00 53 19 34 0 0 0 0 0
..................................................AGGAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 52.00 52 22 0 18 1 11 0 0
............................................................................................TGACATTCTTCTATTCTACTT.................................................... 21 1 1 51.00 51 51 0 0 0 0 0 0
............................................................................................GGAGATTCTTCTATTCTACTT.................................................... 21 1 1 49.00 49 45 4 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTGTACTTT................................................... 22 1 1 49.00 49 42 6 1 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACT............................................................................................ 23 1 1 48.00 48 17 0 15 16 0 0 0
............................................................................................TGAGATTCTTCTATTCTACATT................................................... 22 1 1 47.00 47 14 33 0 0 0 0 0
............................................................................................TCAGATTCTTCTATTCTACTTC................................................... 22 2 1 45.00 45 0 45 0 0 0 0 0
...........................................................................................CTCAGATTCTTCTATTCTACTTT................................................... 23 2 1 45.00 45 0 45 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACAA........................................................................................... 24 1 1 44.00 44 24 2 16 2 0 0 0
............................................................................................CGAGATTCTTCTATTCTACTT.................................................... 21 1 1 44.00 44 36 7 1 0 0 0 0
............................................................................................TGAGATTCTTATATTCTACGTT................................................... 22 2 1 44.00 44 44 0 0 0 0 0 0
..................................................ATTAGAATAGCAGGCTTATCAC............................................................................................. 22 1 1 43.00 43 4 33 6 0 0 0 0
............................................................................................TGAGATTTTTCTATTCTACTT.................................................... 21 1 1 42.00 42 40 1 1 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTTCTTT................................................... 22 2 1 41.00 41 0 41 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACGT.................................................... 21 1 1 40.00 40 40 0 0 0 0 0 0
.............................................................................................GTGATTCTTCTATTCTACTTT................................................... 21 1 1 40.00 40 38 2 0 0 0 0 0
............................................................................................TTAGATTCCTCTATTCTACTTT................................................... 22 2 1 40.00 40 1 39 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTATACTTT................................................... 22 1 1 39.00 39 24 13 0 1 1 0 0
.............................................................................................GAGACTCTTCTATTCTACTTT................................................... 21 1 1 38.00 38 38 0 0 0 0 0 0
............................................................................................TGAGATTCTTGTATTCTACTTT................................................... 22 1 1 37.00 37 27 10 0 0 0 0 0
............................................................................................TGAGATTATTCTATTCGACTTT................................................... 22 2 1 36.00 36 0 36 0 0 0 0 0
..................................................AGTAGACTAGCAGGCTTATCACA............................................................................................ 23 1 1 36.00 36 36 0 0 0 0 0 0
............................................................................................AGAGATTCTTCTATTCTACTT.................................................... 21 1 1 35.00 35 32 3 0 0 0 0 0
............................................................................................TGAAATTCTTCTATTCTACTT.................................................... 21 1 1 35.00 35 35 0 0 0 0 0 0
............................................................................................TAAGATTCTTCTATTCTACTT.................................................... 21 1 1 35.00 35 18 17 0 0 0 0 0
............................................................................................TGAGATTATTATATTCTACTTT................................................... 22 2 2 34.50 69 23 46 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTGG................................................. 24 1 1 34.00 34 34 0 0 0 0 0 0
............................................................................................TGAGAGTCTTCTATTCTACTTC................................................... 22 2 1 34.00 34 0 34 0 0 0 0 0
............................................................................................TGGGATTCTTCTATTCTACTT.................................................... 21 1 1 33.00 33 31 2 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTATTTT................................................... 22 2 1 32.00 32 0 32 0 0 0 0 0
............................................................................................TGAGATTCTTCTCTTCTACTTC................................................... 22 2 2 32.00 64 0 64 0 0 0 0 0
..................................................AGTAGAATATCAGGCTTATCACA............................................................................................ 23 1 1 32.00 32 13 0 3 8 8 0 0
............................................................................................TAAGATTCTTCTATTCTACTTC................................................... 22 2 1 32.00 32 0 32 0 0 0 0 0
............................................................................................TGAGATTCTTCCATTCTACTT.................................................... 21 1 1 31.00 31 25 6 0 0 0 0 0
............................................................................................TTAGATTCTCCTATTCTACTTT................................................... 22 2 1 31.00 31 0 31 0 0 0 0 0
...........................................................................................CGGTGATTCTTCTATTCTACTTT................................................... 23 3 1 31.00 31 0 31 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTACTTC................................................... 21 1 1 31.00 31 2 29 0 0 0 0 0
..............................................................................................ATATTCTTCTATTCTACTTT................................................... 20 1 1 30.00 30 5 25 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACC............................................................................................ 23 1 1 30.00 30 1 1 0 20 7 1 0
............................................................................................TGAGATTCTTCTATTCTACC..................................................... 20 1 1 30.00 30 3 27 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTACGTT................................................... 21 1 1 29.00 29 29 0 0 0 0 0 0
............................................................................................TGAGATTCCTCTATTCTACTT.................................................... 21 1 1 29.00 29 21 8 0 0 0 0 0
..................................................AGTAGAATAGCAGTCTTATCACA............................................................................................ 23 1 1 29.00 29 2 1 10 9 7 0 0
............................................................................................TCAGATTCTTCTATTCTACTT.................................................... 21 1 1 29.00 29 10 19 0 0 0 0 0
...................................................GTAGAATAGCAGGCTTATCA.............................................................................................. 20 0 1 29.00 29 29 0 0 0 0 0 0
...........................................................................................ATGAGATTCTTCTATTCTACTT.................................................... 22 1 1 29.00 29 29 0 0 0 0 0 0
............................................................................................TGAGATTACTCTATTCTACTTT................................................... 22 2 1 29.00 29 0 29 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTTTACTTT................................................... 21 1 1 28.00 28 28 0 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTA....................................................... 18 0 1 28.00 28 11 1 11 5 0 0 0
............................................................................................TTAGATTCTTCTATTCTACTTA................................................... 22 2 1 28.00 28 1 27 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCAACTTT................................................... 22 1 1 28.00 28 14 14 0 0 0 0 0
..................................................AGTAGAATAGCATGCTTATCACA............................................................................................ 23 1 1 27.00 27 3 0 5 11 8 0 0
..................................................AGTAGAATCGCAGGCTTATCACA............................................................................................ 23 1 1 25.00 25 20 0 3 1 1 0 0
............................................................................................TGAGATTATTCTATTCTACTTA................................................... 22 2 1 24.00 24 5 19 0 0 0 0 0
...........................................................................................TTGAGATTCTTCTATTCTACTT.................................................... 22 1 1 24.00 24 24 0 0 0 0 0 0
.............................................................................................GAGATTCCTCTATTCTACTTT................................................... 21 1 1 24.00 24 23 1 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTAATTT................................................... 22 1 1 24.00 24 18 6 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACTC.................................................... 21 2 1 24.00 24 0 24 0 0 0 0 0
.............................................................................................GACATTCTTCTATTCTACTTT................................................... 21 1 1 24.00 24 19 5 0 0 0 0 0
............................................................................................TGAGTTTCTTCTATTCTACTT.................................................... 21 1 1 24.00 24 7 16 0 0 1 0 0
........................................................................................GATCTGAGATTCTTCTATTCTACTTT................................................... 26 2 1 24.00 24 0 24 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCCACTTT................................................... 21 1 1 24.00 24 24 0 0 0 0 0 0
............................................................................................TGCGATTATTCTATTCTACTTT................................................... 22 2 1 23.00 23 0 23 0 0 0 0 0
............................................................................................TGCGATTCTTCTCTTCTACTTT................................................... 22 2 1 23.00 23 0 23 0 0 0 0 0
..................................................AGTCGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 23.00 23 19 0 0 3 1 0 0
............................................................................................TTAGATTCTACTATTCTACTTT................................................... 22 2 1 22.00 22 0 22 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACAT........................................................................................... 24 0 1 22.00 22 10 0 10 2 0 0 0
............................................................................................TTAGATTCTTCTACTCTACTTT................................................... 22 2 1 22.00 22 0 22 0 0 0 0 0
............................................................................................TTAGATTTTTCTATTCTACTTT................................................... 22 2 1 22.00 22 1 21 0 0 0 0 0
..................................................AGTAGAATAGAAGGCTTATCACA............................................................................................ 23 1 1 22.00 22 13 1 0 8 0 0 0
............................................................................................TTAGATGCTTCTATTCTACTTT................................................... 22 2 1 22.00 22 0 22 0 0 0 0 0
............................................................................................TGAGTTTATTCTATTCTACTTT................................................... 22 2 1 22.00 22 0 21 0 0 1 0 0
..............................................................................................TGATTCTTCTATTCTACTT.................................................... 19 1 1 22.00 22 22 0 0 0 0 0 0
............................................................................................TGAGATTCTTCTACTCTACTT.................................................... 21 1 1 22.00 22 18 4 0 0 0 0 0
............................................................................................TGCTATTCTTCTATTCTACTTT................................................... 22 2 2 22.00 44 1 43 0 0 0 0 0
............................................................................................TTCGATTCTTCTATTCTACTT.................................................... 21 2 1 22.00 22 0 22 0 0 0 0 0
............................................................................................TGAGATTCTTATCTTCTACTTT................................................... 22 2 1 21.00 21 0 21 0 0 0 0 0
............................................................................................TGAACTTCTTCTATTCTACTTT................................................... 22 2 1 21.00 21 21 0 0 0 0 0 0
............................................................................................TGAGAGTCTTCTATTCTACTT.................................................... 21 1 1 21.00 21 10 11 0 0 0 0 0
............................................................................................TGAGATTCTTCTCTTCTACTT.................................................... 21 1 1 21.00 21 2 19 0 0 0 0 0
............................................................................................TTAGACTCTTCTATTCTACTTT................................................... 22 2 1 21.00 21 0 21 0 0 0 0 0
............................................................................................TGAGACTCTTCTATTCTACTT.................................................... 21 1 1 21.00 21 16 3 0 1 0 1 0
..........................................................................................ATTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 20.00 20 20 0 0 0 0 0 0
............................................................................................TGCGATTCTTATATTCTACTTT................................................... 22 2 1 20.00 20 1 19 0 0 0 0 0
............................................................................................GGAGATTCTTCTATTCTACTTC................................................... 22 2 1 20.00 20 0 20 0 0 0 0 0
............................................................................................TGAGATTCTTCTCTTCTACTGT................................................... 22 2 1 20.00 20 0 20 0 0 0 0 0
............................................................................................TTAGCTTCTTCTATTCTACTTT................................................... 22 2 1 19.00 19 4 14 0 1 0 0 0
............................................................................................TGATTTTCTTCTATTCTACTTT................................................... 22 2 1 19.00 19 0 19 0 0 0 0 0
............................................................................................TTGGATTCTTCTATTCTACTTT................................................... 22 2 1 19.00 19 1 18 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCGCA............................................................................................ 23 1 1 18.00 18 11 0 4 1 2 0 0
............................................................................................TTAGATTCTTCTATTCTACTTTA.................................................. 23 2 1 18.00 18 5 13 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACG............................................................................................ 23 1 1 18.00 18 5 1 5 6 1 0 0
....................................................TAGAATAGCAGGCTTATCACATG.......................................................................................... 23 0 1 18.00 18 8 2 2 4 2 0 0
............................................................................................TGAGGTTCTTCTATTCTACTT.................................................... 21 1 1 18.00 18 14 2 0 1 0 1 0
.....................................................AGAATAGCAGGCTTATCACA............................................................................................ 20 0 1 17.00 17 6 0 9 1 1 0 0
............................................................................................TGGGATTCTTCTATTCTACTGT................................................... 22 2 1 17.00 17 17 0 0 0 0 0 0
...........................................................................................GTGAGATTCTTCTATTCTACTT.................................................... 22 0 1 16.00 16 16 0 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTTCTT.................................................... 21 1 1 16.00 16 12 3 1 0 0 0 0
.............................................................................................GAGGTTCTTCTATTCTACTTT................................................... 21 1 1 16.00 16 16 0 0 0 0 0 0
............................................................................................TTAGATTCTTCTAGTCTACTTT................................................... 22 2 1 16.00 16 1 15 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACTGT................................................... 22 2 1 16.00 16 1 15 0 0 0 0 0
..................................................AATAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 16.00 16 2 3 7 1 2 1 0
............................................................................................TGAGATTCTTCTATCCTACTT.................................................... 21 1 1 16.00 16 14 2 0 0 0 0 0
..........................................................................................GTTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 16.00 16 15 1 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCGACTTT................................................... 22 2 1 16.00 16 0 16 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACCTC................................................... 22 2 1 16.00 16 0 16 0 0 0 0 0
............................................................................................TGGTATTCTTCTATTCTACTTT................................................... 22 2 1 16.00 16 16 0 0 0 0 0 0
.............................................................................................GAGCTTCTTCTATTCTACTT.................................................... 20 1 1 16.00 16 16 0 0 0 0 0 0
............................................................................................TTAGATTCTGCTATTCTACTTT................................................... 22 2 1 16.00 16 0 16 0 0 0 0 0
............................................................................................TTAGATTCTTCTATCCTACTTT................................................... 22 2 1 15.00 15 0 15 0 0 0 0 0
.............................................................................................CAGATTCTTCTATTCTACTTT................................................... 21 1 1 15.00 15 9 6 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACGTT................................................... 22 2 1 15.00 15 0 15 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTACTGT................................................... 21 1 1 15.00 15 15 0 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACATT................................................... 22 2 1 15.00 15 0 15 0 0 0 0 0
............................................................................................TGAGATTCTTCTGTTCTCCTTT................................................... 22 2 2 14.50 29 29 0 0 0 0 0 0
............................................................................................TTCGATTCTTCTATTCTACTTC................................................... 22 3 4 14.50 58 0 58 0 0 0 0 0
..................................................AGTATAATAGCAGGCTTATCACA............................................................................................ 23 1 1 14.00 14 1 0 3 6 4 0 0
..................................................AGTAAAATAGCAGGCTTATCACA............................................................................................ 23 1 1 14.00 14 8 0 4 1 1 0 0
............................................................................................TGAGATTCTTATATTCGACTTT................................................... 22 2 1 14.00 14 12 2 0 0 0 0 0
............................................................................................TGAGATTCTTCTAGTCTACTT.................................................... 21 1 1 14.00 14 13 1 0 0 0 0 0
............................................................................................TGAGATTCCTCTATTCTACTTC................................................... 22 2 1 14.00 14 0 14 0 0 0 0 0
............................................................................................TGAGATTCTTATATTCTACT..................................................... 20 1 1 14.00 14 11 2 1 0 0 0 0
............................................................................................TGAGATTCTTCTATTCGACTT.................................................... 21 1 1 14.00 14 11 2 0 0 1 0 0
..................................................AGTAGAATAGCAGGCTTCTCACA............................................................................................ 23 1 1 14.00 14 9 0 1 0 4 0 0
.............................................................................................GAGATCCTTCTATTCTACTTT................................................... 21 1 1 14.00 14 14 0 0 0 0 0 0
.............................................................................................GAGATTATTCTATTCTACTT.................................................... 20 1 1 13.00 13 13 0 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCCCA............................................................................................ 23 1 1 13.00 13 0 0 0 2 11 0 0
............................................................................................TGAGATTCTTCTATTCTACCT.................................................... 21 1 1 13.00 13 10 3 0 0 0 0 0
............................................................................................TGAGATTCTTCGATTCTACTT.................................................... 21 1 1 13.00 13 13 0 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTA................................................................................................. 18 0 1 13.00 13 6 1 4 1 1 0 0
..................................................AGTAGAATAGCAGGATTATCACA............................................................................................ 23 1 1 13.00 13 0 1 3 5 3 1 0
............................................................................................TGAGATTATTCTATTCTACTGT................................................... 22 2 1 13.00 13 7 6 0 0 0 0 0
..................................................AGTAGAATAGCAGGCTTATCT.............................................................................................. 21 1 1 13.00 13 3 0 9 1 0 0 0
.............................................................................................GAGATTCTTCTATCCTACTTT................................................... 21 1 1 13.00 13 12 1 0 0 0 0 0
............................................................................................TGAGATTCTTTTATTCTACTT.................................................... 21 1 1 13.00 13 8 4 1 0 0 0 0
..................................................AGTAGAATACCAGGCTTATCACA............................................................................................ 23 1 1 13.00 13 8 0 4 1 0 0 0
............................................................................................TGAGATTCTTATATTCTACTG.................................................... 21 2 1 13.00 13 13 0 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTGCTTT................................................... 22 2 1 13.00 13 0 13 0 0 0 0 0
.............................................................................................GAGATTCTTCTACTCTACTTT................................................... 21 1 1 13.00 13 12 1 0 0 0 0 0
............................................................................................TGAGATTTTTCTCTTCTACTTT................................................... 22 2 1 13.00 13 0 13 0 0 0 0 0
............................................................................................TGAGATTCTTATATTTTACTGT................................................... 22 3 3 12.67 38 38 0 0 0 0 0 0
..................................................ATTAGAATAGCAGGCTTATCA.............................................................................................. 21 1 1 12.00 12 4 0 8 0 0 0 0
..................................................TGTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 12.00 12 10 0 0 1 1 0 0
............................................................................................TGAGATTCTTATATTCTACTTG................................................... 22 2 1 12.00 12 12 0 0 0 0 0 0
..........................................................................................GCTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 12.00 12 10 2 0 0 0 0 0
............................................................................................TTAGATCCTTCTATTCTACTTT................................................... 22 2 1 12.00 12 0 12 0 0 0 0 0
..................................................AGAAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 12.00 12 2 0 4 4 2 0 0
............................................................................................TTACATTCTTCTATTCTACTTT................................................... 22 2 1 12.00 12 0 12 0 0 0 0 0
............................................................................................TGAGATTCTTCTATTCTACGGT................................................... 22 2 1 12.00 12 12 0 0 0 0 0 0
............................................................................................TTAGATTCTTCTATTCTACTCT................................................... 22 2 1 12.00 12 0 12 0 0 0 0 0
..........................................................................................ACTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 12.00 12 9 3 0 0 0 0 0
.............................................................................................GAGATTCTTCTATTCTACTTTG.................................................. 22 1 1 12.00 12 12 0 0 0 0 0 0
.............................................................................................GAGATTCTTCTATGCTACTTT................................................... 21 1 1 12.00 12 12 0 0 0 0 0 0
..................................................ATCAGAATAGCAGGCTTATCACA............................................................................................ 23 2 1 12.00 12 0 12 0 0 0 0 0
............................................................................................TGAGATTGTTCTATTCTACTT.................................................... 21 1 1 12.00 12 9 3 0 0 0 0 0
............................................................................................TGAGATTCTTATATTTTACTTT................................................... 22 2 2 11.50 23 23 0 0 0 0 0 0
..............................................................................................AGATTCTTCTATTCTACTTTT.................................................. 21 1 1 11.00 11 11 0 0 0 0 0 0
.............................................................................................GAGATTCTTCCATTCTACTTT................................................... 21 1 1 11.00 11 11 0 0 0 0 0 0
...............................................................................................GATTCTTCTATTCTACTT.................................................... 18 0 1 11.00 11 11 0 0 0 0 0 0
............................................................................................TTAGGTTCTTCTATTCTACTTT................................................... 22 2 1 11.00 11 0 11 0 0 0 0 0

Anti-sense strand reads

CACAAGACTCAATAGGAACTCCTAACAGATGCTAGCCGCACCGAAACCGTTCATCTTATCGTCCGAATAGTGTACAAGGTAAGTTAGACGACACTCTAAGAAGATAAGATGAAAGCTGTTGTGGGCAAATGTAGTTTGGGCTGGGCAGATGGTCACGGTAAAGTT

************************************((.(((...((((.(((((((((((.(((....(((((.((............)))))))....))))))))))))))))))...)))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V107

male body		 M055

female body

 V040

embryo
................................................................................................................................................GCAGATGGTCACGGGGAA... 18 2 4 0.25 1 1 0 0
.............................................................................................................................CAAAGGTAGTTCGGGCTG...................... 18 2 5 0.20 1 0 1 0
.......................CGCAGATGCTACCCGCACC........................................................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:22312243-22312407 - der_20 GTGTTC------------------------TGAGT-----------TAT------CCTTGAGG----------------------------ATTGTCTA----------------------------------CGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTTACATCAAA----CCCGACCCG----------TC------TAC-CAGTGCCATTTCAA
droYak3 3L:23123684-23123844 - dya_21 GTGTTC------------------------TGAAT-----------TAT------CCTTAAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAAA----CC----CCG----------AC------TAC-AAGTGCAGTTTCAA
droSec2 scaffold_11:2578656-2578808 - dse_21 GTGTTC------------------------TCAGT-----------TAT------CCTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGA------------------------C------TGCCAAGTGCACTTT---
droSim2 3l:22164253-22164415 - dsi-mir-958 GTGTTC------------------------TCAGT-----------TAT------CCTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----CCCGACCCG----------AC------TGCCAAGGGCACTTC---
dm3 chr3L:22662351-22662515 - dme-mir-958 GTGTTC------------------------TGAGT-----------TAT------CCTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----CCCGACCCG----------AC------TGC-CAGTGTAATTTCAA
droEug1 scf7180000409801:238253-238418 - GTGCTG--------------------------AGTT-ATACCAAGGTGT------CCTCAAGG----------------------------ATTTTCCG----------------------------------CGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGCAAACATCACC----T-------C----------AG------AAC-TAGTGCGATTTCAA
droBia1 scf7180000302377:589981-590137 + GAGTTT------------------------CGCGT-----------TAT------CCTCAAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCG-ATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGA-CACCCGTAAACATCACC----T-------G----------AG------TAC-AAGTGCAATTT-GA
droTak1 scf7180000415263:76325-76484 - GTGTC--------------------------GAGT-----------TAT------CCTCAAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGCCAACT-------A----------AA------TAC-AAGTGCAATTTCAA
droEle1 scf7180000491199:65248-65408 + GTGTCG---------------------AAGGGAGT-----------TAT------CCCCTGGT----------------------------ATTTTCCT----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-GACCCGTGTACATCACA----T-------A----------AG------TTC-GAGTGCCATTTGAA
droRho1 scf7180000773586:33566-33726 + GTGTTG---------------------AATTGAGT-----------TAT------CCTCAAGG----------------------------ACTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCA-ACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----T-------A----------AG------AAC-AAGTGCAATTGAAA
droFic1 scf7180000453830:377305-377470 + GTGCTT------------------------TG--CTGACTCTGTGCTAT------CCTCAAGG----------------------------ACTTT-CT----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTAAACATCACC----C-------A----------AG------TTC-GAGTGCAATTTCGA
droKik1 scf7180000299918:44932-45105 - GTGTTG---------------------CGTACAGT---------GGTAT------CCCCAAGGATA---------------------------TTTCCG----------------------------------CGAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCACC----C-------AGGTGTGGCTGAG------ACG-AAGC-TGGCTTCCA
droAna3 scaffold_13337:22380371-22380537 - dan_26 -TGCGC------------------------CGAGT-----------TATGTG---CCCCAAGAATA---------------------------TTCCAA----------------------------------CGACCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTCC-TTTA-ACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACCGATCTCCT-------G----------GGAAGAAATCC-CAATGAA----CTA
droBip1 scf7180000396426:441171-441327 + GTTATA------------------------TG-----------------------CCCCAAGGATA---------------------------TTTCAA----------------------------------CGACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTA-GCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACCGTTCTACT-------G----------GG------AAT-AAATGCTTCCACAA
dp5 XR_group8:344172-344322 - dps-mir-958 ATATTC------------------------CGTGC--AGACGATAGTGT------GCCCAAGGATATGG------------------------CTAGCA----------------------------------CGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTA-------------------------------------------------A
droPer2 scaffold_96:132292-132395 + dpe_47 --------------------------------------------------------------------------------------------------------------------------------------GATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATC----------------------------------------------------
droWil2 scf2_1100000004511:7060856-7061014 + dwi_26 TAATTGCAAAAAAAAAAGGATCGATATCGATGAGT-----------TTT-------GACTATG----------------------------ACTAT-------------------------------------CTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACAAA-------------------------------------------------
droVir3 scaffold_13049:17089337-17089522 + dvi-mir-958 GTGTAG------------------------TGTGT-----------TGAGTGTACGACTTAGAAAATGCACAGTAGAAGTTTTTCCTTTGTGTTTTT----------------TTAATGTTCTCTATATATTTTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCA-ACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTC----------------------------------------------------
droMoj3 scaffold_6680:22084805-22084928 + dmo_24 ------------------------------TGTGT-----------TTT------CCCTG-TG----------------------------ATTCT-------------------------------------CAGTCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACCATTTG-ACCGAGTGTGAGATTCTTCTATTCTACTTTCGACAAGCACCAGTCAGCGTC----------------------------------------------------
droGri2 scaffold_15110:15103982-15104158 - dgr_47 ATAAAT---------------------AAATATG------------TAA------ATTCAAATATG---------------------------TTTCCACGTGTGTGCAGGTTTTATGGTTTTTGTTTTACTCTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCG-ACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACA----TTC------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GTGTTC------------------------TGAGT-----------TAT------CCTTGAGG----------------------------ATTGTCTA----------------------------------CGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTTACATCAAA----CCCGACCCG----------TC------TAC-CAGTGCCATTTCAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221435342.00435342276501157409673347622672
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................21133163.0033163292683662629154440
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................21121683.00216832133035300000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................23113460.0013460495532513998588812810
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22110569.0010569791049000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2012662.002662236512829127310
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................2012151.0021512145600000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2212010.0020108627362484353860
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................2311598.001598136322801330
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................2011533.00153314498400000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................2111030.001030465259477720
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231702.007026663200400
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................211396.003967319160208350
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201358.0035812415317141580
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221328.00328324001210
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................231230.00230230000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191218.002181892900000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................231188.00188187100000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................191144.00144143100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................221140.00140835700000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG..........................................................................211134.00134134000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................221122.00122122000000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................181122.00122962600000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................191113.001133800362100
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................191105.001055629013520
................................................................................................................................................................................TGTTCCATTCA-ATCTGCTG...............................................................................................191103.00103617031130
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24198.009893500000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTG.........................................................................21193.009392100000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19188.008885300000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22182.0082681400000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................21169.006926700000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22168.006867100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................23167.0067561100000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21162.006262000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20153.0053105024860
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23148.00481700015160
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24144.0044242001620
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................21131.003122900000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................23130.003011170200
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................20130.003032700000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20129.002929000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18128.0028111001150
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24122.0022100001020
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23118.00185101560
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................23118.00188202240
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................20117.00176001910
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................22116.001616000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................18113.00136101410
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCT.....................................................................................................................21113.00133000910
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................22112.001212000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................21111.001111000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................18111.001111000000
droYak3
GTGTTC------------------------TGAAT-----------TAT------CCTTAAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAAA----CC----CCG----------AC------TAC-AAGTGCAGTTTCAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................222227250.504545011830910014447775914221070004
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................21219690.0039380336479283425322100013
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................21214248.002849602822227310000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................2227496.001499201891480120000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2323070.506141943008897161416344761010
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................2021565.00313003127300000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2021293.50258722450115601130000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................232970.0019400163330060010000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................202718.501437013934400000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................222716.5014333769256313210800000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................232554.501109010951220000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................222410.5082108061410000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................222243.0048604018500000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................212224.004480339141941700010
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................212210.5042111295614801850100
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................192145.0029002494010000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................232141.002820279300000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................222141.0028202344800000000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................232121.502430243000000000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................182112.0022422012100000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................222103.502070204210000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................192103.002060206000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................20276.50153083431112130000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24271.001420137310100000
................................................................................................................................................................................TGTTTAACTCA-ATCTGCTG...............................................................................................19270.0014015154340000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20258.0011603422580020000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19257.001140114000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22255.501110111000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19243.5087075830100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................21243.0086077900000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................23235.00700551410000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................23229.505932716100030000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21225.0050050000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18221.5043043000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19220.00400300000100000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC....................................................................................................................23218.50370161170030000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................22215.5031031000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................20214.5029012800000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................22214.5029029000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................21214.0028042400000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................18213.0026025100000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24213.0026017610020000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACAT..................................................................................................................22212.0024018010050000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20211.5023023000000000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT...........................................................................22211.0022013900000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................19210.5021018020010000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................21210.5021021000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23210.0020013310030000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA...................................................................................................................2428.501706450020000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................2327.0014011120000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................1826.5013013000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTGC.........................................................................2225.5011001100000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA.......................................................................2425.5011011000000000
droSec2
GTGTTC------------------------TCAGT-----------TAT------CCTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGA------------------------C------TGCCAAGTGCACTTT---SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221121290.00121290119374362148569
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................2119144.0091449141210
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................2119058.0090588884787620
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2318937.008937225817724692215
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2211408.00140848934048297
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................2011124.0011241124000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................201802.0080275420235
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................201665.00665665000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................211659.006596815542610
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................211515.005152481965912
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................231463.00463455143
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191179.00179179000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221171.00171166050
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................201162.0016227161181
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231152.00152150020
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201148.001486452275
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................23195.009595000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................18178.007878000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19173.0073441253
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................23173.007373000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22150.005049010
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19148.0048257160
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................19146.004646000
................................................................................................................................................................................TGTTCAATTCA-ATCTGCTG...............................................................................................19141.0041140270
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19141.004141000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21138.003838000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG..........................................................................21134.003434000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTG.........................................................................21134.003434000
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................19129.0029112142
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................23129.002928100
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................22125.002525000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22125.002525000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................23125.002553170
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................22124.002424000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18118.001810080
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20118.001818000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23117.00172591
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA...................................................................................................................24115.00157260
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24114.001414000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................18113.00136151
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24113.00135611
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22112.001212000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24111.00114250
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23111.00113710
...........................................................................................................................................................TAGAATAGCAGGCTTATCACAT..................................................................................................................2218.0081430
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT...........................................................................2217.0072140
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................2017.0072140
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC....................................................................................................................2317.0073040
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................2217.0077000
...........................................................................................................................................................TAGAATAGCAGGCTTATC......................................................................................................................1816.0060051
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................2316.0061140
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCT.....................................................................................................................2115.0052300
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCA.....................................................................................................................2215.0053110
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................2215.0055000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................1815.0055000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTAC............................................................................1815.0055000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATT......................................................................................................................2014.0040400
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................2113.0033000
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1813.0033000
............................................................................................................................................................AGAATAGCAGGCTTATCAC....................................................................................................................1913.0033000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTT..........................................................................2313.0032010
...........................................................................................................................................................TAGAATAGCAGGCTTATCACT...................................................................................................................2113.0032100
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATG.................................................................................................................2513.0031110
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC..................................................................................................................2413.0032010
droSim2
GTGTTC------------------------TCAGT-----------TAT------CCTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----CCCGACCCG----------AC------TGCCAAGGGCACTTC---SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................22128651.00286513049666426179266371091002706564020000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2319149.0091495958453522341541423291111463233506717021
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................2117144.007144552223286337331870103003911000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCG.......................................................................2415480.0054800000490857200000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................1914165.00416502213368446400000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2013255.00325521763202593291017101700000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................2112043.00204302220362000000100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................181829.0082900057566600101000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................221821.008215186781599327111510041304
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................201312.003120083020000000002000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................201275.0027500024626300000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................211220.0022002235201276017200000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................231185.0018502615800000000100000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................211151.00151119827110036719050207
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................231133.001330211300000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................231125.001251290000000103100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................231104.001040002901000000200000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................181101.001010110851200000001001
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................23183.0083011810000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20177.0077012130000007000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................20165.0065321934510000802000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................19152.0052023470000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTCG.......................................................................23143.0043000038500000000000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................18140.0040045310000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................22138.00380222101000100200000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19138.0038000350300000000000
................................................................................................................................................................................TGTTCAATTCA-ATCTGCTG...............................................................................................19138.00380312600000001700000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................19136.00360001719000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTAC............................................................................18132.0032000027500000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................23129.0029000290000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATT................................................................................15127.0027000000025182000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24125.0025000240000010000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19123.002300248300100202001
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCGA......................................................................25123.0023000023000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG..........................................................................21117.0017000170000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22117.001712580000010000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24114.001400830000100100001
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................23114.0014000140000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................23113.001310300000000900000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA...................................................................................................................24111.001100900000000101000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................22110.001001090000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................2217.00700050000200000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................2317.00700020000000500000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC....................................................................................................................2316.00601010000000400000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................2215.00500230000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTG.........................................................................2114.00400040000000000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1814.00400201100000000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................2114.00400040000000000000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT...........................................................................2214.00400020000000200000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTCG.......................................................................2214.00400001300000000000
.........................................................................................................................................................AGTAGAATAGCAGGCT..........................................................................................................................1613.00300000001020000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................2413.00300011000000100000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCA.....................................................................................................................2213.00301000010000001000
............................................................................................................................................................................................ATCTGCTGTGAGATTCTTCTATT................................................................................2313.00300300000000000000
.............................................................................................................................................................................................TCTGCTGTGAGATTCTTCTATTCTACTTT.........................................................................2913.00300300000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTG..........................................................................2013.00300030000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................2213.00300030000000000000
.........................................................................................................................................................................................................TTCTTCTATTCTACTTTCG.......................................................................1913.00300002100000000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................1813.00300011100000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAA....................................................................................................................2213.00300110000000100000
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................1912.00200010000010000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................2112.00201010000000000000
.............................................................................................................................................................GAATAGCAGGCTTATCACA...................................................................................................................1912.00200010000000100000
..............................................................G----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCA..........................................................................................................................................2912.00200020000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATC......................................................................................................................1912.00200000000200000000
..........................................................................................................................................................GTAGAATAGCAGGCTTAT.......................................................................................................................1812.00200011000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................2412.00200020000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAT....................................................................................................................2212.00200000000000200000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCG.....................................................................................................................2112.00200200000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................2112.00200020000000000000
..............................................................................................................................................................................................CTGCTGTGAGATTCTTCTATTCTACTTT.........................................................................2812.00200200000000000000
.................................................................................................................................................................................GTTCAATTCA-ATCTGCTG...............................................................................................1812.00200110000000000000
.........................................................................................................................................................AGTAGAATAGCAGGC...........................................................................................................................1512.00200000000110000000
........................................................CTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTC.................................................................................................................................................2812.00200200000000000000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTC...............................................................................1812.00200002000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................2112.00200020000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCGAC.....................................................................2611.00100001000000000000
dm3
GTGTTC------------------------TGAGT-----------TAT------CCTCGAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----CCCGACCCG----------AC------TGC-CAGTGTAATTTCAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................22167120.0067120000042525148250030327223100000100042010041922501440036001000023421220141000001459222000000000000000000322146151029771421551161720248807226169173449459872675882839143607291136642020547480942957135893216981114675274208051090931581042303118192056186287001000160000000000000001692940478006215942012595391838300400149455447216101043908800000020418800100100001141998523748723710722942220172140000140065660006360003829893007060200060000100200000004915010140070000009414042925413652040317607414700223000200003000137017697357165180000001
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................23128719.0028719000005052138767000000000010100000000101000011000101500000017219850000000000000000000000176116494086006616194174001451161348324513120020516283553931550010100000000112000601311103122814000002000000000000000230700732147041510000015233944970000166044560000076671000000008644202123441261212000163006294433639000099527103590200016010000020000000165811109738001201000121604084503456344214122511702126455600161391031351100289101309112331236137515172755102000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTATC......................................................................25210325.50206510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139326719000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................2114378.004378000006010966110000000001000001529129103100000100201115000000130631990000000000000000000100110520103901429401531417824575372031755105118324113191741970270200100150410001501100000000000002000000000000000113104000131466331501560000039102748300094014000000234000000000020241916041810152601530003000393701010001381280015700000000000000001000000000010002000000136182501320000250125710000000100001002305717752545000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2213178.00317800000000042110000000000000000000000000000001000002000000312512000000000000000000000040212510017249011201716016327400000445140130000100000000001000000000021200000010000000000000000000004714100006000007212667000410320000004130020000005401761500415000000002000915017700002112300136010008000000010100000020800020000000004110517613123004402333001100100000014001172200160216462277001000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................2113058.00305800001000130100000000001000000000002000000000000001000000740000000000000000000000030293300072120110142350722000000002215251900000000100000000000000000210000000000000000000000000000001000000000000412945000230270000001700000000049131531000010000000000153134050000094000410100030000000000000002231801080000000001013873934062000213507061000060013000221001660109193202265186000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................2112138.002138000002000110000000000002000000000011000000000001000000000201450000000000000000000000101570001435001100324210323050000042604022100000000000000100001000100000000010000000000000000201002452030000000011826290003714600000061300200000021412648020000010000120042270360000124002800000000000000010000007020416003000000465526120406111098079970130504041000600920149112133159133000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAATC................................................................................................................2611734.00173400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186548000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2011054.00105400000000002010000000000001001000007001000000110003000000391935000000000000000000000040020009120004025320021344000010620005000000000000000151001000000500010000000000000000000160400324241104000000113641350004001000000008000000000144642800010002000000001290660000114900101000000000000000000000000000010000000001758024000020015230000000000000200802715261920000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTATC.......................................................................241981.009810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657324000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATC.................................................................................................................251497.004970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348149000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201492.00492000000000000100000000000000010000032000000000000000000000303000000000000000000000000080003040000430102000010000100000000000000000003010000000010000000100000000000000000000001101000800000061120001204000000010000000000642560000000000002000840230000110001700000000000000000000000010102000000000494101600007091800000010000000001702518223423000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................181444.0044400000000000000000000000000006131401000000000000000000000044262200000000000000000000000000000203000033123100000000000000000000000003115167534000001100000000000000000000000000010000041316000000000006000002000000000000000000049542900010000000000002100000000000000000000000000000000000000000000000000811040000101100000000000000000000301000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................221297.0029700000912216418800000000000000000000000000000000000000000000000000000000000000000000100000001310110000100020210010010007203701000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000300000000000031000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................221293.00293000007001101411600000000000000000000000000000000000000000000000000000000000000000000901300012507004068200713002043213103200000000000000000000000000000000000000000000000000110000030100001000000001000000000000000000000000001001000000000010002100000012000000000000000000000000000000000000000000000020000100000000000000000000000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................201266.0026600000000000000000000000000000000003000000000000000000000410000000000000000000000000000000020100331000000000100000000000000000000000000000001000000000000000000000000000000000000000000000001000004030000000000000000004251000200000000000002201300005190014000000000000000000000000200000000000002104103000020420000000000000200110149184711000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................191266.002660000000000000000000000000000220400000000000000000000000013711000000000000000000000000000001006000013913040000101020120700000000001303910436002106000000000000000000000000000402000520200100000010500000300000000000000000004420400000000000000001312000003004000000000000000000000000000000000000000504030000100000000000000000001020221000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................211240.002400000000000020000000000000000000000000000000000000000000023846000000000000000000000000010007018002012130016330000021101119010000000001010000000000010000000000000000000000003106000223401012000002000000000000000000000000000003100000000000000001002000012002000000000000000000000000000000000000000044010000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................191190.001900000000000000000000000010000000000100000000000100000000012070000000000000000000000006000020100105500240000000000000000000000000000000000000000000000000000000000000000020100010100000000000001100050300000000000000000001070000000000000000880200000000000000000000000000000011000000000000000311301000007031200001000000000007011211108000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................231188.0018800000311230020000000000000000000000000000000000000000000000000000000000000000000020400001012123012202011501000005101111000000000001010000000100000000000000000000000000000220600162200000000001110000000000000031000000000012313030111000020001003000033002000000000000000000000000000000000000000215040000200100000000000000001022000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCATC...................................................................................................................231185.00185000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010281000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................231179.001790000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000100000000000000001000010000000000000000010100000000000000000000000000000000000000000000000000001000000000000000000050000000000000300023010000160050000000000000000000000000010100000000015397004000047018600000000000001000001110000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTATC......................................................................242157.00314000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023777000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................221155.0015500000100165450000000000000000000000000000000000000000000000000000000000000000000010000001130000000100010000004000100400000000000000000000000000000000000000000000000000010000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................191132.00132000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000200101110000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000226000000000000000034030000120000000000000000000000000100000100000000004110600006066000000000000000050756104000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231115.0011500000000000000000000000000000000000000000000000000000000000000000000000000000000010300002060010350002000000202101070000100000001000000000000000000000000000000000000000000001000000000000001000000000000002000000000000100102010100002828002102000001002000000000000000000000000000000000000000000010000000100000000000000000000100000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................231112.001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000002000000000000000000000000000000100000000000000100000304000000010000000000110500000000000000003108000020003000000000000000000000020000000000000005130001000000100000000000000300501131254000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................241106.0010600000000010000000000000000000000000000000000000000000000000000000000000000000000030480000010000220000000000001021030000000000000000000000000000000000000000000000000000000001000000000000010000000010000000000000000000000010000000003813000000000000001000000000000000000000110000010000000007111000000002100000000000001000000122000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................231104.00104000000000110000000000000000000000000000000000000000000002553400000000000000000000000000000103000004000000000001000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000811000000000001000000000000000000000000000000000000000002001000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................18198.00980000000000000000000000020000000000000000000000000000000010000000000000000000000000000000102000021000000000000000000000000000000010000000000000000000000000000000000000100000000000000000001211000001000000000000000000015500000000000041005810000000000000000000000000000000000000000000000001102090000306400100000000000000005316000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24189.0089000000000000000000000000000000000000000000000000000000002338130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000033001001000000000000000000000000000000000000000000000000100010000101000000000000000000010001000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................20182.008200000100010000000000000000000000000000000000000000000000000000000000000000000000000000004014001061332210100010031020800000000000000000000000000000000000000000000000000010100050000000000000000000000000000000000000000001000000000000000002302000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................19174.00740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402100002356200100001110000400000000000000000000000000000000000000000000000000000100061100001000000000000000000000000000000000002100000000000000006000000000000000000000000000000000000000000000000000211000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAATC..................................................................................................................24172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGTTTAATTCA-ATCTGCTG...............................................................................................19171.00710000000000000000000000000000100000000000000000000000000001000000000000000000000000000000201001013000200000000000300000000000000000000000000001000000000000000000000000000000010101100000000100000000000000000000000000010000000010000000056010000020020000000000000000000000000000000000000071701010000100100000000000000000002002000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................22164.00640000000000000000000000000000000000000000000000000000000000000000000000000000000000089000004000030002110000000002220400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001001000000001000000000000000000000000000000000000001110010000100000000000000000001031003000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................20163.006300000000000000000000000000000000000000000000000000000000186220000000000000000000000000000020000000100200000000000000000000000000110000000000000000000000000000000000000010100200000000000001000000000000000000000000000012000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23154.0054000000000000000000000000000000000000000000000000000000000000000000000000000000000004000030000001000000000000000000100000000000000000000000000020000000000000000000000000000000000000000000200000000000000000000000000100000000000000001004004000002004000000000000000000000000000000000000005211030000101300001000000000000013012000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACAT..................................................................................................................22152.0052000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000100011000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000011000000000000000002102000000001000000000000000000000000300000000000000410000000001100000000000001003035263000000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................18150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000003000000301000004111100000000010000200000000000002000000000000000000000000000000000000010200050000000000000200000000000000000000000000103100000000000000000000000000000000000000000000000000000000000000000000300020000000100000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTC.......................................................................24142.004200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAT.......................................................................24141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23135.0035000000010000000000000000000000000000000000000000000000000000000000000000000000000002500000100001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000002000000000000000000001000003000000000000000000000000000000000000000001211010000101100000000000000001030111000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24133.0033000000000010000000000000000000000000000000000000000000000000000000000000000000000500000010000003400010100200200001200000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000002000000001000000001000000000000000000000000000000000000000000100000000000100000000000000000000110000000
...........................................................................................................................................................TAGAATAGCAGGCTTATC......................................................................................................................18131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000009900000000000000000000000000000000000000000000000000000000000000000000300000000400000000000000100000010000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATG.................................................................................................................25127.002700000000000000000000000000000000000000000000000000000000111410000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCT..............................................................................17124.002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAAT.................................................................................................................25123.002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC........................................................................22122.00220000000000000000000000000000000000000000000000000000000092110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACC...................................................................................................................21118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000200010000801100000000000000000000021000000
.........................................................................................................................................................AGTAGAATAGCAGGCTT.........................................................................................................................17117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTA..........................................................................21117.0017000000000100000000000000000000000000000000000000000000000000000000000000000000000000000070100000000000100000000100200000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCC.....................................................................................................................21116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000002000000000000000000000000000000000000000000000000000000000000703100000000000000000000010000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC.........................................................................22116.00160000010000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAC.......................................................................24115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTAA.........................................................................22114.0014000001000101000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAAC.................................................................................................................25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTCTTCTATTCTACTTT.........................................................................17214.002800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCG.......................................................................24114.0014000000000000000000000000000000000000000000000000000000003270000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCA.........................................................................22114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAT....................................................................................................................22113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001001000000100000000000000000001011001000000
.............................................................................................................................................................GAATAGCAGGCTTATCACA...................................................................................................................19113.0013000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100030000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000002000000000000000000000000001000000000000
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................20112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000013000000000000000000000000001000101000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................21112.0012000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000040100003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC..................................................................................................................24111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT...........................................................................22111.0011000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000001002000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCT.....................................................................................................................19110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000010000201000000000000000002011000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTC......................................................................2529.50190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTATC......................................................................2329.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACAATC................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGTTTAATTCA-ATCTGCTGT..............................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100010000002000000000000000001000011000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTT........................................................................................................................1819.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000010002000000
...............................................................................................................................................................ATAGCAGGCTTATCACA...................................................................................................................1719.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................2119.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000060000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTT..........................................................................2319.009000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000002200000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAA....................................................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000012000001000000001000000000000000000000000000000000000000000010000000100000000000000000001000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACTC..................................................................................................................2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTATC.......................................................................2328.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
GTGCTG--------------------------AGTT-ATACCAAGGTGT------CCTCAAGG----------------------------ATTTTCCG----------------------------------CGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGCAAACATCACC----T-------C----------AG------AAC-TAGTGCGATTTCAASizeHit CountTotal NormTotal
No Reads
droBia1
GAGTTT------------------------CGCGT-----------TAT------CCTCAAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCG-ATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGA-CACCCGTAAACATCACC----T-------G----------AG------TAC-AAGTGCAATTT-GASizeHit CountTotal NormTotal
No Reads
droTak1
GTGTC--------------------------GAGT-----------TAT------CCTCAAGG----------------------------ATTTTCCA----------------------------------CGATCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGCCAACT-------A----------AA------TAC-AAGTGCAATTTCAASizeHit CountTotal NormTotal
No Reads
droEle1
GTGTCG---------------------AAGGGAGT-----------TAT------CCCCTGGT----------------------------ATTTTCCT----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-GACCCGTGTACATCACA----T-------A----------AG------TTC-GAGTGCCATTTGAASizeHit CountTotal NormTotal
No Reads
droRho1
GTGTTG---------------------AATTGAGT-----------TAT------CCTCAAGG----------------------------ACTTTCCA----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCA-ACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----T-------A----------AG------AAC-AAGTGCAATTGAAASizeHit CountTotal NormTotal
No Reads
droFic1
GTGCTT------------------------TG--CTGACTCTGTGCTAT------CCTCAAGG----------------------------ACTTT-CT----------------------------------CGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTAAACATCACC----C-------A----------AG------TTC-GAGTGCAATTTCGASizeHit CountTotal NormTotal
No Reads
droKik1
GTGTTG---------------------CGTACAGT---------GGTAT------CCCCAAGGATA---------------------------TTTCCG----------------------------------CGAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCACC----C-------AGGTGTGGCTGAG------ACG-AAGC-TGGCTTCCASizeHit CountTotal NormTotal
No Reads
droAna3
-TGCGC------------------------CGAGT-----------TATGTG---CCCCAAGAATA---------------------------TTCCAA----------------------------------CGACCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTCC-TTTA-ACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACCGATCTCCT-------G----------GGAAGAAATCC-CAATGAA----CTASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221103289.0010328966351364241626426127
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................2118510.00851075199261143911
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2317051.007051571617412995639298
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................2115730.00573056101200000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................2214101.0041014040610000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2212699.0026992263655219107193
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................2111281.0012811084421416512
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................201910.0091077988071521
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................231700.007005851073050
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................201584.0058458220000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................201456.00456398580000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221455.0045544810132
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201326.0032626915361914
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231195.00195180150000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................211186.0018617710035
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................221175.0017517410000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191142.0014299430000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................221105.0010582230000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................18189.008965240000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20185.00858300020
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19182.008262000200
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................21176.007652440124
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23169.00695700264
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24164.00646300010
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................23155.00555500000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19149.004922222210
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................22147.00474610000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................23146.00464510000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................19144.00444310000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24139.00393540000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................21136.00361350000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19132.00323020000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC..................................................................................................................24120.00202000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATC......................................................................................................................19119.00191900000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................20118.00180180000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................23117.00171160000
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................20117.00171121012
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24117.00171600010
...........................................................................................................................................................TAGAATAGCAGGCTTATCACAGG.................................................................................................................23116.00161212010
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................21116.00160160000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20116.0016930121
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22116.00161600000
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................19115.00151400010
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................18115.00151100301
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAT....................................................................................................................22114.00141300010
.........................................................................................................................................................AGTAGAATAGCAGGCTTT........................................................................................................................18113.00131100110
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCT.....................................................................................................................21111.0011800030
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAA....................................................................................................................22111.0011910010
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18110.0010800011
...........................................................................................................................................................TAGAATAGCAGGCTTATCACAG..................................................................................................................22110.0010601012
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................1819.009450000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTC.........................................................................2019.009090000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................2219.009900000
..........................................................................................................................................................GTAGAATAGCAGGCTTAT.......................................................................................................................1818.008800000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAG....................................................................................................................2218.008800000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAG..................................................................................................................2417.007600010
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................2317.007700000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTC.........................................................................1925.00100100000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATT......................................................................................................................2015.005300101
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................2415.005500000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAGGT................................................................................................................2614.004310000
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1814.004400000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACTT..................................................................................................................2414.004400000
droBip1
GTTATA------------------------TG-----------------------CCCCAAGGATA---------------------------TTTCAA----------------------------------CGACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTA-GCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACCGTTCTACT-------G----------GG------AAT-AAATGCTTCCACAASizeHit CountTotal NormTotal
No Reads
dp5
ATATTC------------------------CGTGC--AGACGATAGTGT------GCCCAAGGATATGG------------------------CTAGCA----------------------------------CGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTA-------------------------------------------------ASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221324082.00324082171675451413041365310992032150145
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................21122485.00224852190172816554452427000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22121377.0021377032202441099200000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................21119653.0019653118620713312600001
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................23114168.001416861953810582819265914811016
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2212778.00277811955243174346119003
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................2312267.00226701789316153314001
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................2112263.002263618951814020280003
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................2011911.00191101897113000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2011466.00146601259138441186000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................201914.009140874355000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201802.00802167421428367004
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221660.00660065900100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231505.0050504502524321000
................................................................................................................................................................................TGTTCCATTCA-ATCCGCTG...............................................................................................191359.0035952621427510000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191229.002290186385000000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................181213.002130183272100000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................221200.00200019901000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................211171.001710514916100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................231159.001590845614302000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................211157.00157015700000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................211156.0015608514129027000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................221139.001390271066000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................201136.00136013600000000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................231134.00134013400000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................191126.001261101308013000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................231125.00125012401000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................211123.00123049623000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................191112.00112011200000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24193.009307870602000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19169.0069031258401000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19164.006406400000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................20152.005202428000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24149.004904521100000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22141.0041025142000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22140.004004000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATC......................................................................................................................19138.003803800000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................23131.003124001906000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18126.002602500100000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................18125.002502320000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20123.002301320800000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23123.002301800401000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................18122.002201810300000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC.........................................................................22119.001900172000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCT.....................................................................................................................21119.001901400023000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23116.00160720403000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................22116.001601500010000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................24216.003202363000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTGC.........................................................................22115.001500141000000
.................................................................................................................................................................................GTTCCATTCA-ATCCGCTG...............................................................................................18115.001501500000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAA....................................................................................................................22114.001401100102000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT...........................................................................22114.001401130000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................22114.001401400000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................23112.00120600402000
................................................................................................................................................................................TGTTCCATTCA-ATCCGCTGT..............................................................................................20111.001101100000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTAA.......................................................................23111.001101001000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG..........................................................................21111.00110470000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24110.00100900001000
..........................................................................................................................................................GTAGAATAGCAGGCTTAT.......................................................................................................................1819.0090900000000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------GATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATC----------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................22135214.0035214121347123407133
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................2113301.003301332970001
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................2113133.0031339310516102
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2312197.002197756862287126274
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................211409.0040911295112288
................................................................................................................................................................................TGTTCCATTCA-ATCCGCTG...............................................................................................191379.003793471418000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................231374.0037403731000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................201276.0027612675003
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................201260.0026002600000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................221258.0025812129970020
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................201142.0014211410000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201121.00121863130136
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22197.00970970000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................23166.00660660000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................22154.005410431000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19150.005022980011
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................22143.00430430000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................22139.00390390000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................23131.00312604010
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................18130.00307230000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................19129.00295231000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................23127.00270270000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................23126.00260260000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22125.00251240000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................21124.00242114124
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................19123.00230230000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23120.00201901000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................23120.00200200000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19114.0014059000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24113.0013090004
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20112.00120120000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21112.00121110000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................1919.009090000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................2219.009090000
.................................................................................................................................................................................GTTCCATTCA-ATCCGCTG...............................................................................................1819.009900000
............................................................................................................................................................................................ATCCGCTGTGAGATTCTTCT...................................................................................2018.008701000
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................2017.007421000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................2416.006060000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................1816.006041001
...............................................................................................................................................................................................CGCTGTGAGATTCTTCTATT................................................................................2015.005500000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................2215.005050000
.............................................................................................................................................................GAATAGCAGGCTTATCACA...................................................................................................................1914.004310000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................1813.003021000
..............................................................................................................................................................................................CCGCTGTGAGATTCTTCTATTCTACTTT.........................................................................2813.003300000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAT....................................................................................................................2213.003002001
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCT.....................................................................................................................2113.003020001
..............................................................................................................................................................................................CCGCTGTGAGATTCTTCTATT................................................................................2112.002200000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................2212.002020000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC........................................................................2212.002020000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................2412.002020000
................................................................................................................................................................................TGTTCCATTCA-ATCCGCTGTGAGATTC.......................................................................................2712.002200000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA...................................................................................................................2412.002020000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATGTTCC.............................................................................................................2912.002100001
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................1912.002020000
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1811.001010000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTA.........................................................................2111.001010000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC.........................................................................2211.001010000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTG......................................................................2511.001010000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA.......................................................................2411.001010000
......................................................................................................................................................................................ATTCA-ATCCGCTGTGAGATT........................................................................................2011.001010000
...............................................................................................................................................................ATAGCAGGCTTATCACATGTTCCA............................................................................................................2411.001001000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTC......................................................................2511.001010000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTAC............................................................................2111.001010000
............................................................................................................................................................AGAATAGCAGGCTTATCAC....................................................................................................................1911.001001000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................2111.001010000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCG.......................................................................2411.001010000
droWil2
TAATTGCAAAAAAAAAAGGATCGATATCGATGAGT-----------TTT-------GACTATG----------------------------ACTAT-------------------------------------CTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACAAA-------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221160629.0016062949156281226403835
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................23121756.0021756271244929018556190
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................21115935.00159355156734020611
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................21112707.0012707012699170
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2211854.001854129114149850
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................2311501.001501214822150
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................2011307.00130701305110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2011259.0012592120414336
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................201788.007880788000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231547.005470542230
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................211517.0051701076333413
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................211355.003551112112265
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191354.003542352000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................181342.003422340000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201324.003242150191503
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221222.0022221990210
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................191163.00163112714210
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................231118.001180118000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................231112.001120108040
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................221112.001120112000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................231110.001100110000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATG.................................................................................................................231106.001060423610
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................19192.0092092000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24180.0080078020
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19173.00731571131
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19165.0065065000
................................................................................................................................................................................TGTTCCCTTTACAACCGGTG...............................................................................................20164.0064059050
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20154.00540333153
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24145.00450250200
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22144.0044044000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18138.00380220151
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................18131.00310200101
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21131.0031130000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22125.0025024010
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................22124.0024024000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................24122.0022022000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22121.0021018030
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23121.0021230160
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................23121.00211100100
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................18119.0019019000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCC.......................................................................24118.0018018000
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................20118.0018051120
...........................................................................................................................................................TAGAATAGCAGGCTTATCACAT..................................................................................................................22117.001709710
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23117.0017011150
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................22116.0016016000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT...........................................................................22116.0016014020
..........................................................................................................................................................GTAGAATAGCAGGCTTATC......................................................................................................................19112.0012011010
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC....................................................................................................................23112.001225050
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA...................................................................................................................24111.001136020
.............................................................................................................................................................GAATAGCAGGCTTATCACA...................................................................................................................19110.001006040
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTT..........................................................................2319.00908010
.........................................................................................................................................................AGTAGAATAGCAGGCTTT........................................................................................................................1819.00909000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................2219.00909000
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................1919.00908010
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................2019.00909000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTAA.......................................................................2319.00909000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................2119.00909000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................2117.00706100
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCCC......................................................................2516.00606000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTTT........................................................................2016.00606000
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1815.00505000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................2415.00503020
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC........................................................................2215.00505000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA.......................................................................2415.00505000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT.........................................................................2415.00505000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTTA........................................................................2015.00505000
..........................................................................................................................................................GTAGAATAGCAGGCTTAT.......................................................................................................................1814.00404000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAT....................................................................................................................2214.00401030
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................2114.00404000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCA.......................................................................2413.00303000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATG.................................................................................................................2513.00302010
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAT.......................................................................2413.00303000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAA....................................................................................................................2213.00301020
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATGA................................................................................................................2413.00302010
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATGT................................................................................................................2613.00300120
................................................................................................................................................................................TGTTCCCTTTACAACCGGTGT..............................................................................................2113.00302010
.....................................................................................................................................................................................................GAGATTCTTCTATTCTAC............................................................................1812.00202000
droVir3
GTGTAG------------------------TGTGT-----------TGAGTGTACGACTTAGAAAATGCACAGTAGAAGTTTTTCCTTTGTGTTTTT----------------TTAATGTTCTCTATATATTTTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCA-ACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTC----------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221399626.0039962610733129244614646200000005263332375818691334116135245457780300531300546140256349498729175162527102555392557528816617738136025540027273355683332291151463312789940172035214128381316227212227
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................21150845.00508451404324110841120000000825378128339303269013008991541420610423442103215143120319227200502129242716251772469725143135089220026171310012
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................21127959.0027959002784199000000000024000203102010000000000002000000000000000000000100000010000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2319461.0094611102153058166100011000023977467032491983291943121547072110367611182712312512790731167012712373101894240685335118129501750510316127763433114452
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2014527.00452740347750000000000086521750494301901225722617367192010000058100000121011031211551221027032400000112000100
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................2214440.004440201744243000000000023001005200000020000000002000000000000000001001000200000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................2013781.0037810037770000000000011000002000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................2313389.0033890027682360000000000475412301413048380223111652000000040100011020251015231520100271200000000000111
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2211261.00126137170638010011000041912109802143330322134102000102001000012402613146420754113010101123010100101
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................2011197.00119700113749000000000000010201000000000000000000000000000000000100000002400000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................2111078.00107830048300100020000401661598020396209111920160001133000000000000000000010330801000000030001010
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................231802.0080200653370000000000812153301611010112913010000040000000000010000101101016900000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231741.0074100670170000000000911040107500042050000000003000000000000000000000003000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................231559.00559005512000000000010012001000000000000000000000000000000000000000001000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................221378.003780035814000000000010100100100000000000000000000000001001000000000000000000000000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191377.003770035511000000000000110100300000000000000000000000000000000201110000000000000000000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................231344.00344003402000000000000000000200000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................181327.00327003009000000000011000100000000041000000001000000000010000510000000200000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................181283.0028300128000000000003815565902623000450120010000002000000000000000001000102000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................191270.00270002700000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................191218.002180011280000000000141002170106000131200000010040000001010211002121710102400000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221200.00200201950000000000000010000000000000000000000000000000000000000000200000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201196.001965090500000100009514110141101000100000010400000002000010000101204400000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................211159.001590011435000000000011100000300000020000000001000000000000000000100000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................241147.00147007110000000000151100303404285221010421203000000000000000000000104600000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTC.......................................................................241146.00146001211000000000012002102200001020000000002000000000000000002000106000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCC.......................................................................241120.00120001042000000000011000000000010001100000001000000000000000000000105200000000000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................19199.009900962000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................21197.0097004400000000000210201011000000200000000040000001000000001001603000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19178.0078302500000000000320410012000000000000000030000000000000000000302500010000040000010
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22178.007800714000000000000000000000000000000000000000000000000000000100000100000000000001
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22177.007700770000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA...................................................................................................................24176.0076140141000000000010000000000000000000000000000101513260432000810600000010100000001
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................22173.0073004320000000000030110001000010010000000001000000000000000001000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................23170.007010301000000000060001103000000201000000003000001111020011000050600000000000000002
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC....................................................................................................................23167.006740262000000000010000200200000001000000000000012402111121000420600000000000100000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC........................................................................22167.006700652000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTCC......................................................................25164.006400630000000000000000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23162.0062103400000000000300010001010100100010000020000000000000001010001202000000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21156.005610550000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................22151.005100510000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................22145.004500450000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGTACAATTCA-ACCTAGTG...............................................................................................19143.004300314000000000000000000100000000000010000000100000010000000210000000100000000000
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................18140.004000390000000000000000001000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24138.003820161000000000020000000600010100000000001000000000100100000000600000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................23137.003730021000000000000000000000000000000000000000000000011000000010100000000000000000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCA.....................................................................................................................22135.003520220000000000001000000100000000000000000000000000000000000010701000000000000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................21129.002900280000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24127.002710140000000000010000002001000000000000000000001000000000000000200000112000000001
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20125.002500250000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCT.....................................................................................................................21124.002400700000000000100001000000000100000000000000000000000000100001100000000002000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCCC......................................................................25124.002400220000000000000000000010000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................24123.002300182000000000000000002000000000000000000000000000000000000000001000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................21120.002000911000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCC.....................................................................................................................21118.00180080000000000000001004010000000000000002000000000000000000000200000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTCC.......................................................................23117.001700170000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT.........................................................................24116.001600150000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................20114.00140080000000000000000000100000000000000000000000000000000000030200000000000000000
.......................................................................................................................................................CAAGTAGAATAGCAGGCTTATCAC....................................................................................................................24114.00140062000000000000000000000000000000000000000000020000100000200100000000000000000
............................................................................................................................................................AGAATAGCAGGCTTATCACA...................................................................................................................20114.001400100000000000000010000000000000000000001000000000000000000010100000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTGG........................................................................23113.001300130000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATC......................................................................................................................21112.00122071000000000000010001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTAC............................................................................18112.001200120000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................20111.00110037000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACA...........................................................................20111.00110090000000000000000100000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTC..........................................................................20111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATC......................................................................................................................19110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTTC.......................................................................23110.00100090000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCACC...................................................................................................................2419.0090041000000000000000000000000000000000000000002000000000000200000000000000000000
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1819.0090090000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CTTCTATTCTACTTT.........................................................................1518.0080000000000000000000000000000000000000000000000000000001250000000000000000000000
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTAA.......................................................................2318.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA.......................................................................2418.0080060000000000020000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAT....................................................................................................................2218.0080040000000000000000000000000000000000000000000000000000000000400000000000000000
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTA..........................................................................2118.0080061000000000000000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................AGTAGAATAGCAGGCTTA........................................................................................................................1817.0071030000000000001000000000000000000000000000000000000000000020000000000000000000
.......................................................................................................................................................CAAGTAGAATAGCAGGCTTATC......................................................................................................................2217.0070042000000000000000000000000000000000000000000000000000000000100000000000000000
droMoj3
------------------------------TGTGT-----------TTT------CCCTG-TG----------------------------ATTCT-------------------------------------CAGTCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTACCATTTG-ACCGAGTGTGAGATTCTTCTATTCTACTTTCGACAAGCACCAGTCAGCGTC----------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................221790393.0079039334644149589443058382
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................21140286.00402863015924111002873
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................22139304.003930474100392290
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................21132590.00325903144110011480
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................2318399.00839927591103162420932404
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................2314016.004016257840014286
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................2013150.00315030040001460
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................2012678.002678229260332651
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................2012520.0025202484000360
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................2211348.00134859417031409171
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................191770.007706050001650
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................231687.00687610101750
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................211592.00592318243522220
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................181400.004002230001770
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................231300.00300652002330
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................221281.00281266000150
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................231278.0027827100070
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................211257.0025770002500
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................231228.0022822700010
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................221227.00227300001970
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................191196.00196101100940
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................191178.0017817800000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................221163.0016315700015
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................191151.0015114600050
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................201123.00123546022833
................................................................................................................................................................................TGTACCATTTG-ACCGAGTG...............................................................................................191115.00115192600619
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC.........................................................................211114.0011420001120
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................20177.00771000760
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................21177.00771824002213
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................22150.005031000190
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22150.00505000000
..........................................................................................................................................................GTAGAATAGCAGGCTTATCAC....................................................................................................................21147.00474600001
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................24146.00464300030
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................19145.004534001010
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................23134.003416000414
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTGC.........................................................................22131.00310000310
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................18129.00292500013
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................24129.00291810073
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTC.........................................................................20128.00280000280
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT.........................................................................24126.002612000140
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................18124.00242400000
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................21124.00242300010
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTC.........................................................................19122.00220000220
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................24122.002211000110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC.........................................................................22121.00210000210
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................22119.00191900000
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................22117.00171700000
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................24116.00161200022
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................20116.00161600000
droGri2
ATAAAT---------------------AAATATG------------TAA------ATTCAAATATG---------------------------TTTCCACGTGTGTGCAGGTTTTATGGTTTTTGTTTTACTCTGATCGGTGTGGA-TTGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCG-ACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACA----TTC------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT.........................................................................22143260.00432604317486
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT.........................................................................2113828.00382838280
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT..........................................................................2112915.00291529069
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACA...................................................................................................................231879.00879533346
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT........................................................................231710.007107046
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTT..........................................................................201255.002552550
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACT...........................................................................201245.002452441
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTT.........................................................................201129.001291290
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA........................................................................23195.0095950
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT........................................................................22170.0070700
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG........................................................................23167.0067670
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCAC....................................................................................................................22147.00473710
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTT.........................................................................19146.0046460
........................................................................................................................................................................................................ATTCTTCTATTCTACTTT.........................................................................18140.0040400
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCA.....................................................................................................................21131.00311021
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT.........................................................................23130.0030300
..........................................................................................................................................................GTAGAATAGCAGGCTTATCACA...................................................................................................................22129.0029290
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC........................................................................23127.0027270
................................................................................................................................................................................TGTAACATTCG-ACATGGTG...............................................................................................19121.0021210
....................................................................................................................................................................................................TGAGATTCTTCTATTCTAC............................................................................19114.0014131
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA........................................................................22110.0010100
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA.........................................................................22110.0010100
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACT...........................................................................19110.0010100
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG........................................................................2219.00990
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT.......................................................................2419.00990
......................................................................................................................................................................................................AGATTCTTCTATTCTACTT..........................................................................1918.00880
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG.........................................................................2216.00660
....................................................................................................................................................................................................TGAGATTCTTCTATTCTA.............................................................................1816.00660
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC.........................................................................2215.00550
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACC...................................................................................................................2315.00514
.........................................................................................................................................................AGTAGAATAGCAGGCTTATC......................................................................................................................2014.00422
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA.......................................................................2414.00440
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACT...................................................................................................................2314.00404
...........................................................................................................................................................TAGAATAGCAGGCTTATCACA...................................................................................................................2113.00330
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACG...................................................................................................................2313.00303
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA.......................................................................2413.00330
..................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT.........................................................................2412.00220
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA..................................................................................................................2412.00220
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC........................................................................2212.00220
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTCC......................................................................2512.00220
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGT.......................................................................2412.00220
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC..........................................................................2112.00220
......................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT........................................................................2112.00220
.............................................................................................................................................................GAATAGCAGGCTTATCACA...................................................................................................................1912.00220
......................................................................................................................................................................................................AGATTCTTCTATTCTACT...........................................................................1812.00220
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAC.......................................................................2412.00220
.......................................................................................................................................................................................................GATTCTTCTATTCTACTTTT........................................................................2012.00220
.......................................................................................................................................................................................................GATTCTTCTATTCTACTT..........................................................................1812.00220
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTTC......................................................................2512.00220
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT..................................................................................................................2412.00211
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGC.......................................................................2411.00110
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATC.................................................................................................................2511.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTAC......................................................................2511.00110
...................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT..........................................................................2211.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGTG......................................................................2511.00110
..............................................................................................................................................................AATAGCAGGCTTATCACAT..................................................................................................................1911.00110
...........................................................................................................................................................TAGAATAGCAGGCTTATCA.....................................................................................................................1911.00101
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTGC.......................................................................2311.00110
........................................................................................................................................................................................................ATTCTTCTATTCTACTTTA........................................................................1911.00110
.....................................................................................................................................................................................................GAGATTCTTCTATTCTACTTA.........................................................................2111.00110
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC....................................................................................................................2311.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCAG......................................................................2511.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTACG......................................................................2511.00110
..........................................................................................................................................................GTAGAATAGCAGGCTTATCA.....................................................................................................................2011.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTT......................................................................2511.00110
........................................................................................................................................................AAGTAGAATAGCAGGCTTATC......................................................................................................................2111.00101
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACC...........................................................................2011.00110
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC..................................................................................................................2411.00110
...........................................................................................................................................................TAGAATAGCAGGCTTATCAC....................................................................................................................2011.00110
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACAAA.................................................................................................................2511.00110
.........................................................................................................................................................AGTAGAATAGCAGGCTTATCACATAG................................................................................................................2611.00110
........................................................................................................................................................AAGTAGAATAGCAGGCTTATCA.....................................................................................................................2211.00110
.........................................................................................................................................................AGTAGAATAGCAGGCTTAT.......................................................................................................................1911.00110
.................................................................................................................................................................................GTAACATTCG-ACATGGTG...............................................................................................1811.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTATC......................................................................2511.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTGT........................................................................2311.00110
.....................................................................................................................................................................................CATTCG-ACATGGTGTGAGA..........................................................................................1911.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTTG......................................................................2511.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGCT......................................................................2511.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTGGA.......................................................................2411.00110
.....................................................................................................................................................................................................GAGATTCTTCTATTCTAC............................................................................1811.00110
...........................................................................................................................................................TAGAATAGCAGGCTTATCACATGT................................................................................................................2411.00110
............................................................................................................................................................AGAATAGCAGGCTTATCAC....................................................................................................................1911.00110
....................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGA.......................................................................2411.00110
................................................................................................................................................................................................GGTGTGAGATTCTTCTATTCTACTTTA........................................................................2711.00110
.........................................................................................................................................................................................................TTCTTCTATTCTACTTTT........................................................................1840.50220

Generated: 09/08/2015 at 09:53 PM