ID:

der_145

 Coordinate:

scaffold_4929:11719050-11719113 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.9 -22.5 -22.3

Flybase annnotation

utr3 [utr3_minus_1363]; utr3 [utr3_minus_1364]

No Repeatable elements found

Sense Strand Reads

GTCAAAGTCAACAATAATTAGTTCTATATTAATTGATCAAAATTATATATCTAAGTAGTGGATACAAACGGCGATTTGGTATAAAAATGTCGCATTGTATGACCTGCTTAACTAGCTGATTTTGTATCCCAACGTACAAAGAAGGCCAACAGTGAAATACATTC

***********************************..((((((((..((..(((((((...((((((.(((((.(((......))).)))))..))))))...)))))))..))..))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M057

embryo

 V040

embryo

 M055

female body

 V108

head

 V107

male body		 V060

head
..................................................CTAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 0 1 1431.00 1431 1042 235 153 1 0 0
...........................................................................................GCATTGTATGACCTGCTTAACT................................................... 22 0 1 327.00 327 296 12 19 0 0 0
..................................................CGAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 135.00 135 135 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCG........................................................................................... 23 0 1 131.00 131 62 49 20 0 0 0
..................................................CTAAGTAGTGGATACAAACGGC............................................................................................ 22 0 1 102.00 102 78 20 3 1 0 0
............................................................................................CATTGTATGACCTGCTTAACT................................................... 21 0 1 62.00 62 50 9 3 0 0 0
...........................................................................................GCATTGTATGACCTGCTTAACC................................................... 22 1 1 48.00 48 48 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCGAT......................................................................................... 24 0 1 47.00 47 36 10 1 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGA.......................................................................................... 24 1 1 41.00 41 0 41 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGG.......................................................................................... 24 1 1 30.00 30 2 27 1 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGAT......................................................................................... 25 0 1 29.00 29 23 3 3 0 0 0
..................................................CTATGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 19.00 19 19 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCGA.......................................................................................... 23 0 1 18.00 18 7 1 10 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCG........................................................................................... 23 1 1 14.00 14 0 14 0 0 0 0
..................................................CGAAGTAGTGGATACAAACGGCG........................................................................................... 23 1 1 13.00 13 13 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCCA.......................................................................................... 24 2 1 13.00 13 0 13 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGG............................................................................................. 21 0 1 12.00 12 7 2 3 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCGA.......................................................................................... 24 1 1 12.00 12 0 12 0 0 0 0
..................................................CGATGTAGTGGATACAAACGGCGA.......................................................................................... 24 2 1 11.00 11 11 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCCA.......................................................................................... 24 1 1 10.00 10 2 8 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGC.......................................................................................... 24 1 1 9.00 9 3 6 0 0 0 0
...........................................................................................GGATTGTATGACCTGCTTAACT................................................... 22 1 1 9.00 9 9 0 0 0 0 0
...........................................................................................GCATTGTATGACCTGCTTAAC.................................................... 21 0 1 8.00 8 7 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGC............................................................................................ 22 1 1 8.00 8 0 8 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGAC......................................................................................... 25 1 1 8.00 8 4 4 0 0 0 0
..................................................CGAAGTAGTGGATACAAACGGC............................................................................................ 22 1 1 8.00 8 8 0 0 0 0 0
..................................................CTAAGTAGCGGATACAAACGGCGA.......................................................................................... 24 1 1 8.00 8 6 2 0 0 0 0
..................................................CTAAGTAGTGGATACAAACAGCGA.......................................................................................... 24 1 1 7.00 7 2 5 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCGAC......................................................................................... 24 1 1 7.00 7 7 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGAC......................................................................................... 25 2 1 7.00 7 0 7 0 0 0 0
..........................................................................................CGCATTGTATGACCTGCTTAACT................................................... 23 0 1 6.00 6 5 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGC.......................................................................................... 24 2 1 5.00 5 0 5 0 0 0 0
...........................................................................................GTATTGTATGACCTGCTTAACT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................GCACTGTATGACCTGCTTAACT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
............................................................................................CATTGTATGACCTGCTTAACC................................................... 21 1 1 5.00 5 5 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCCC.......................................................................................... 24 3 1 5.00 5 0 5 0 0 0 0
..................................................CTAAGTAGTGGATACCAACGGCGA.......................................................................................... 24 1 1 5.00 5 0 5 0 0 0 0
..................................................CTAAGGAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 5.00 5 4 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 5.00 5 4 0 1 0 0 0
..................................................CTAAGTAGTGGATACAAACGGAGA.......................................................................................... 24 1 1 4.00 4 4 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAAC............................................................................................... 19 0 1 4.00 4 3 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCC........................................................................................... 23 2 1 4.00 4 0 4 0 0 0 0
..................................................CTAAGTAGTGGATAAAAACGGCGA.......................................................................................... 24 1 1 4.00 4 2 2 0 0 0 0
..................................................CGAAGTAGTGGATACAAACGGCGAT......................................................................................... 25 1 1 4.00 4 4 0 0 0 0 0
..................................................CTAAGTAGTGGATACCAACCGCGA.......................................................................................... 24 2 1 4.00 4 0 4 0 0 0 0
...........................................................................................GCAGTGTATGACCTGCTTAACT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..................................................CAAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCG........................................................................................... 22 0 1 3.00 3 2 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCCAC......................................................................................... 25 3 1 3.00 3 0 3 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGT.......................................................................................... 24 1 1 3.00 3 1 1 1 0 0 0
..................................................CTAAGTAGTGGATACAAACGGGGG.......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..................................................CTAAGGAGTGGATACAAACGGCGG.......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCTA.......................................................................................... 24 1 1 3.00 3 2 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGGGA.......................................................................................... 24 1 1 3.00 3 0 3 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCGG.......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
..................................................CTAAGTAGTGGATACAAAACGCGA.......................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0
.............................................................................................ATTGTATGACCTGCTTAACT................................................... 20 0 1 3.00 3 2 0 1 0 0 0
..................................................CTAAGTAGTGGATGCAAACGGCGA.......................................................................................... 24 1 1 3.00 3 1 1 1 0 0 0
..................................................TTAAGTAGTGGATACAAAAGGCGA.......................................................................................... 24 2 1 3.00 3 2 0 0 0 1 0
..................................................CCAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCGGT......................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTAGTTGATACAAACCGCGA.......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGC............................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
.................................................CCTAAGTAGTGGATACAAACGGCGA.......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................GCCTTGTATGACCTGCTTAACC................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTTGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0
..................................................CGAAGGAGTGGATACAAACGGCGA.......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGAA......................................................................................... 25 2 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGAT......................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
............................................................................................CGTTGTATGACCTGCTTAACT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACAGACGGCGA.......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................ATAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGATT........................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0
..................................................CTAAGGAGTGGATACAAACCGCGA.......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCC........................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................CATCGTATGACCTGCTTAACT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGAC............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................GCATTGTATGACCTACTTAACT................................................... 22 1 1 2.00 2 0 1 1 0 0 0
..................................................CGAAGTAGTGGATACAAACGGCGAC......................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACCAACGGCGG.......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTAGTGTATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTCGTGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 0 1 1 0 0 0
..................................................CTAAGTATTGGATACAAACCGCG........................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCG............................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0
..................................................CTACGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 0 0 2 0 0 0
...........................................................................................GCATTGTATGCCCTGCTTAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................GCAATGTATGACCTGCTTAACT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGC............................................................................................ 21 0 1 2.00 2 1 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGAA......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACTGCGA.......................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0
..................................................CTAAGTAGTGGATACACACCGCCA.......................................................................................... 24 3 1 2.00 2 0 2 0 0 0 0
..................................................GTAAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CATAGTATGACCTGCTTAACT................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAATGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0
..................................................CTAAGTAGGGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACCAACCGCCA.......................................................................................... 24 3 1 2.00 2 0 2 0 0 0 0
..................................................CTCAGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0
..................................................CTAAGTAGTGGATACACACGGCGA.......................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0
...........................................................................................GCATTGTGTGACCTACTTAAAT................................................... 22 3 2 1.50 3 1 2 0 0 0 0
..................................................CTAAGGAGTGGATACAAAAGGCGG.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGACGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTATGACCTGCTTAACTT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGAATACAAACGTCCA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CGATGTAGTGGATACAAACGGCG........................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGCAGTGGATACAAACCGCC........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
..................................................CGAAGTAGTGGATACAAACGG............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTTTATGACCTGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTATGACCTGCTTAAC.................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGGT......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................GCATTGTATGAGCTACTTAAAT................................................... 22 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAAGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGA............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..................................................CTAATTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAACGGCGAC......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATAACAACGGCGAT......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................CGCATTGTATGACCTGCTTAAC.................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACCAACCGCG........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACACACGGCGG.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................GGATTGGATGACCTGCTTAACT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
....................................................AAGTAGTGGATACAAACGGCGA.......................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
..................................................CTAAGTAGCGGATACAAACCGCGG.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAACTAGTGGATACAAACCGCAA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACTGCGAT......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAACCGCGAT......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................CGAAGTAGTGGATACAAACAGC............................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTGGATGACCTGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CGAAGTACTGGATACAAACGGCGAT......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGGATGACCTGCTTAACT................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CATTGTATGATCTGCTTAACC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATATAAACGGCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................GCACTGTATGACCTGCTTAACC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTATGACCTGCTTAATT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCACGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACAGCCC.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGCT......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................CGAATTAGTGGATACAAACGGCGA.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTGGTGGATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACGAACGGCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACACCGA.......................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACCGCGA.......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATAGAAACGGG............................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
...................................................TGAGTAGTGGATACAAACGGCGAT......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTAGATACAAACGGCG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGCGGATACAAACGGCG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACGTCGA.......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAACCGGCG........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGGG........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGGGG.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATAGAAACGGCGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAAACGCGA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGTATACAAACCGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGCT......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................GCATTGTATTACCTGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTGTATGACCTGCTTAA..................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACAGCG........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGCTACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGCGGATATAAACTG............................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAACGGCGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................TCATTGTATGACCTGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAATTAGTGGATACCAACTGCGA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..........................................................................................CTCATTGTATGACCTGCTTAAC.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACTAATGGCGA.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTGTATGAACTGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATAAAAACGGCG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTGGTGGATACAAACGGCG........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATAAAAAACGCG........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGCGGATACAAACGGCGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................GCATTGTCTGACCTGCTTAACC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTTGATACAAACCGCGAC......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAACGCCA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTCGATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACTGCGCT......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CATGGTATGACCTGCTTAACC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGTCCAC......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATAAAAAAGGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...................................................CTAATAGTGGATACAAACGGCGA.......................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CGTTGTATGACCTGCTTAAC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGGAGTGGATACAAACGGCGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAACTAGTGGATACAAACGCC............................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCGAC......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................CTATGTAGTGGATACAAACGGCG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTGTATGACATGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGCATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
............................................................................................GATTGTACGACCTGCTTAACT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGCAGTGCATACAAACCGCG........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCGATT........................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAATGGC............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCGGT......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATAAAAACCGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................GCATTGTATGACCTGCTTAAT.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGCC............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..................................................CGAAGTAGTGGATACAAACGGCGAG......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCATTGTATGGCCTACTTAACT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACCAACGGCG........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGCTACAAACGGCGAT......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
..................................................CGAAGTAGTGGATAAAAACGGC............................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACTGCGGA......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAAACGCG........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGGGT.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACACACAGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................................................CCATTGTATGACCTGCTTAACT................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAACGCGC.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAACGGCG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GCGTTGTATGACCTGCTTAACT................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................CTAAGTAGGGGATACAAACGGCGG.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAACGGCCA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGAATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGGAGTGGATACAAACGGC............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGCAAACAAACTGCGA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGCGA........................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0
..................................................CTAAGTAGTGGATACAAAACGCGT.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCACCGGCGC.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................GCATCGTATGACCTGCTTAACT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATTGTATGACCTGCTTAACG................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................CTAAGTAGTGGATACAAAATGCG........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACTCCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGCAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CGAACTAGTGGATACAAACGGCGAC......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAGCGGCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGTATACAAACGGCGAT......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
..................................................CTAAGTAGTGGATACAAACGCCGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAAACGG............................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
...............................................ATCCTAAGTAGTGGATACAAACGGCGATT........................................................................................ 29 3 1 1.00 1 1 0 0 0 0 0
...................................................TAAGTAGTGGATACAAACCGCCAC......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGAG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAGGTAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCTA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTTGATACCAACCGCGA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTCGATACAAACGACCA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................GGATTGTATGACCTGCTTAACC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACTAACGGCGA.......................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................GCATTGTATGACCTGCTTAACA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
....................................................AAGTAGTGGATACAAACCGCG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCTAC......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGTATACAAACGGCG........................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTCGATACAAACCGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCCAC......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
............................................................................................TATTGTATGACCTGCTTAACT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAATGGCG........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTTTATACAAACGGCTA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGAAGTGGATACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACCCACCGCGA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGAATACAAACGGCCA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGTGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCAA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGGAGTGGATACAAACGCCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATCCAAACGGCGG.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................CACTGTATGACCTGCTTAACT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAATAGTGGATACACACGGCGC.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGCTACAAACGGC............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACCGCGCT......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCTAC......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGAAACAAACGGCGA.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAACTGCG........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGCAGTGGATACAAACGGCCA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGGTAAACACGGCG........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACCGCGG.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGGCGAGA........................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0
..................................................CGAAGTAGTGGATACAAATGGCGA.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................AGTAGTGGATACAAACAGCGA.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAACGAGTGGATACAAACGGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGCGGATACAAACCGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CGAAGTAGTGGATACAAAGGGCGG.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGT............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAATTAGTGTATACAAACGGCG........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGAGGATACAAAAGGCGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACCAACCGCGGT......................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACCGCGAT......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................TTAAGTAGTGGATACAAACGACGA.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...................................................TAAGTAGTGGATACAAACGGCGACT........................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACCCCCGGCGA.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAACCGGCGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGAAGCGGATACAAAGGGCG........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACGTCGA.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATACAAACTGC............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................CTAAGTAGTGGATACAAAAGGCTT.......................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGGAGTGGATACAAACGGCGAC......................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..................................................CTAAGTAGTGGATAAAAACGGCGG.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................CTAAATAGTAAATACAAACGGC............................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0
..................................................CTAAATAGTGGATACAAACCTCG........................................................................................... 23 3 2 0.50 1 0 1 0 0 0 0
.....................................................CTAAGTGGATACAAACGGCGA.......................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0
..................................................CTAAGTAGAGCATACAAACGCC............................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0
..................................................CTAAGAAGTGGAGACAAACCGC............................................................................................ 22 3 3 0.33 1 0 1 0 0 0 0
..................................................CTAAGTACTGGATACCAACT.............................................................................................. 20 3 6 0.17 1 0 1 0 0 0 0
...........CAATAATTTCTTCTTTATTAATT.................................................................................................................................. 23 3 7 0.14 1 0 0 0 0 0 1

Anti-sense strand reads

CAGTTTCAGTTGTTATTAATCAAGATATAATTAACTAGTTTTAATATATAGATTCATCACCTATGTTTGCCGCTAAACCATATTTTTACAGCGTAACATACTGGACGAATTGATCGACTAAAACATAGGGTTGCATGTTTCTTCCGGTTGTCACTTTATGTAAG

************************************..((((((((..((..(((((((...((((((.(((((.(((......))).)))))..))))))...)))))))..))..))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V060

head
............................................TATATACAGACATCACCTATGT.................................................................................................. 22 3 4 0.25 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4929:11719000-11719163 + der_145 confident GTCAA--AGTCAACAA-TAATT--A----GTTCTATATT-----------------------------------------------------------------------------------------------AAT--------TGATCAAAATTATATATCTAAGTAGTGGATACAAACGGCGATTTGGTATAA-AAA---TGTCGCATTGTATGACCTGCTTAACTAGCTGATTTTGTATCCCAACGTA----CAAAG--------AAGGC----------------------------------------------CAACAGTGAAATA----------------------CATTC
droYak3 2L:10159907-10160070 - dya_24 confident GTCAA--AGTCAACAT-TAATT--A----GTTATTTATT-------GAAGAGCATT---------------------------------------------------------------ATGC--TTCGAAGT--TTT---------AAAAAAATTATATATTTAAGTAGTGGATACAAAAGGCGATT-GATATAA-AAA---TGTCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATCCCAACTTACATCA---------------------------------------------------------------------------------------------------ATTA
droSec2 scaffold_3:14389-14615 - dse_11 confident GTCAA--AGTCAACAT-TAAAT--A----GTGATATATG-------TCAGAGTATTGTCGGAATAAATATAATAATAA----------------------------------TCGGAAA-----TAT--------------------TTAGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAA-AAG---TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAACATA----AAA--TGCTAAATATTACTTATAATTTTGTGAGCTAGGATAAAGTACAAAAGAATT------------------------------------------------
droSim2 2l:13334092-13334318 - dsi-mir-1002 Known_mirbase GTCAA--AGTCAACAT-TAAAT--A----GTGATATATG-------TCAGAGTATTGTCGGAATAAATATAATAATAA----------------------------------TCGGAAA-----TAT--------------------TTAGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAA-AAG---TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAACATA----AAA--TGCTAAATATTACTTATAATTTTGTGAGCTAGGATAAAGTACAAAAGAATT------------------------------------------------
dm3 chr2L:13747527-13747751 - dme-mir-1002 Known_mirbase GTTAA--AGTCAACACATAAGT--A----GTGATA-ATG-------CAAGAGTATTGT-----------------------------------------------------ATCGGAA--------------T--TAA---------TTAGAAATTATATATTTAAGTAGTGGATACAAAGGGCGATTTGATATAA-AAG---TGTCGCATTGTATGACCTACTTAACTAGCTGATTTTGTATCCCAACATA----ATA--GGTTAAAAATTAATTCGAATTTTGTGAGCTGGGATAAAGTACCAAAGAATT-------------------------------TTGAAAACTGCACATTC
droEug1 scf7180000409452:319572-319746 - GTCGA--ATTCAACAT-TA---TTA--------------------------------T-----------------------------------------------------ATACAAA--------------TTAAT-------TTTACAAAAATCATATACTTAAGTAGTGGATACAAATTGCGATTTTAA--AA-TAT---ACTCGCATTGTATGGCCTACTTAGTTAGTTGATTTTTAACACCGTCA-------A-----------------------------------GATAAAAGGCAAGTGAATGAAATTAAGTC---AAGAAATT----------------------TGTTC
droBia1 scf7180000302408:2583523-2583669 + GTCCA--TTTCTTCAT-TTTAA--A----GTAATA-GAACAATTTC---------------------------AATAT----------------------------------TTTAAAA-----TAT-----TTAGA-------ATTTAGAAAATCATTTGTTTAAGTAGTGCATACAAAAGGCGATTTGCTATCA-AAC---GTTCGCATTGTATGCCCTACTTAACTAGTTGGTTTT-------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414072:20290-20446 + GTCCT--CTTTTACAT-TTATT--A----GTAA---------ATTGGAAA---ATTGT-----------------------------------------------------TTTTGAA--------------A--TTT---------CAAAAAATCATACATTTAAGTAGTGGATACAAAAGGCGATTTGCTAATAAAAT---GTTCGCATTGTATGGCCTACTTAACTAACTGATTTTTTTTAACAACATT----AAAAT--------A-----------------------------------------------------------------------------------------A
droEle1 scf7180000491338:1357011-1357144 - GACCA--TGCCAGTGT-TTAA---A----AT---------ACAATA----------------------------AAAG----------------------------------ATT----ATGTTTT--------GTTT---------AAAAAAATCATGTATTTAAGTAGTGGATACAAAAGGCGATTTACAAAATAAAT---GTTCGCATTGTATGCCCTACTTAACTAGCAGGTTTT-------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780107:332587-332731 + GACAA--TGTCGCCGT-TTAA---A----GT---------AGATTA----------------------------ATAA----------------------------------CTAA----AATTCTGT---------T------ATAAAAAAAATCATATGTTTAAGTAGTGGATACAAATGGCGACTTGCAAACGAAAT---GTTCGCATTGTATGTCCTACTTAAGTAGCTGATTTTTCCAAG---CGT-------------------------------------------------------------------------------------------------------------
droFic1 scf7180000448796:279-451 + GTTAT--ACAGAACAC-TA---TA-----ATA----AAA-------GAAAAGTGTT---------------------------------------------------------------ATAT--TTTTAACA--TAT---------TAAAAAATTATACGTTTAAGTAGTGGATACAAAAGGCGATTTGTATAACGAAA---GTTCGCATTGTATGTCCTACTTAAGTGGCTGATTTTTTCAAGCAACATC----AAAAA--------ATTGT----------------------------------------------TTA----GAGGT------------------------GAAT
droKik1 scf7180000302236:232090-232252 + GTTTA--TTCCGGCTT-TCAT---ATA---------GA----ATCA----------------------------CTATCTTGAATTCCTGACCTAAAATAAGGACATACATATCTGTT----------------AATT---------AAGAAAATCGTATGTTTAAGTAGTGGATACAA-CGGCGATTGAACACAATAAT---CTTCGCAGTGTGTTACCTACTTAATTAGTCGATTTT-------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:1815340-1815558 - dan_30 confident TTTAA--AGTCGGCTA-AAATA--A----GTTTCA---------------------------------------------AGCATTTCAAGCCAAAGTTT---TCATAAATATCTGTG---------------------------CAAACTAAATCATGTGTTTAAGTAGGCAATACAT-GGGCGACTAAATAAAA-TAT---ACTCGCAATGTATAGCCTACATAACTAGTTGATTTTTGCAAGCATCC---ATTACA--A-------ATTAAATACAATTTTAA----------------------------------GT----TGAAGTGATTATTGTTATTGAAA--TCCAGCTAC
droBip1 scf7180000396728:1424304-1424484 + GTCCA--AGTTGAAAA-TA---TC--------------------------------TTCCAAACAATATT-------------------------------------------------ATCT--TCTTAATA--TA--------CAACTTAAATCATGTGTTTAAGTAGGCAATACAT-GGGCGATTCATTA------C---ATTCGCAATGTATGGCTTACATAACTAGTTGATTTTTGAAGTCATCC---ATTCCA--------AAGTTAATTTCTATCTTAT----------------------------------AT---GTGAAGTG----------------------TGTAT
dp5 4_group1:1722877-1723014 + dps-mir-1002 Known_mirbase GTCAA--AGTCAACAG-AA---CT--------------------------------GTGCGATTAGAGTTATCAATAG----------------------------------GCAGGT-----CCTCT---------C---------AAAATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCTCGATT---------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_5:3483479-3483616 - dpe_57 confident GTCGA--AGTCAACAG-AA---CT--------------------------------GTGCGATTAGAGTTATCAATAG----------------------------------GCAGGT-----CCTCT---------C---------AAAATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCCCGATT---------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004585:545399-545543 + dwi_25 confident TCTGA--AATCAACAA-ATAT---AGAAAGT-----------ATTGAAAAAGTG----------------TTCATTTG---------------------------------ATCTGGT-----------------CAT---------TGAAAAATGTTACACTTAAGTAGTTAATACAA-TGGCGATTCGTATTCC-ATTGTACATCGCATTGTGTGAGTTACTTTGTTGAGAGATTTT-------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12723:5043895-5044036 - dvi-mir-1002 Known_mirbase ATCAGCAAATCGATAA-G-----------AC---------AAACTA-----------AAAAATTTAAATCATTGCTA----------------------------------------------------------AGGCTTGCTGCAATGAAAATTGAACGCTTAAGTAGTTAATACAA-GGGCGAGTTTTTT--C-TTG---CATCGCATTGTGTGACCTACTTAAATGACAAATTTT-------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GTCAA--AGTCAACAA-TAATT--A----GTTCTATATT-----------------------------------------------------------------------------------------------AAT--------TGATCAAAATTATATATCTAAGTAGTGGATACAAACGGCGATTTGGTATAA-AAA---TGTCGCATTGTATGACCTGCTTAACTAGCTGATTTTGTATCCCAACGTA----CAAAG--------AAGGC----------------------------------------------CAACAGTGAAATA----------------------CATTCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGA..............................................................................................................................................................................2411431.00143115310420235010
...............................................................................................................................................................................................................GCATTGTATGACCTGCTTAACT...................................................................................................................................221327.0032719296012000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCG...............................................................................................................................................................................231131.001312062049000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGC................................................................................................................................................................................221102.00102378020010
................................................................................................................................................................................................................CATTGTATGACCTGCTTAACT...................................................................................................................................21162.006235009000
...............................................................................................................................................................................................................GCATTGTATGACCTGCTTAACC...................................................................................................................................22148.004804800000
...................................................................................................................................................................TAAGTAGTGGATACAAACGGCGAT.............................................................................................................................................................................24147.0047136010000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGG..............................................................................................................................................................................24130.003012027000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGAT.............................................................................................................................................................................25129.002932303000
...................................................................................................................................................................TAAGTAGTGGATACAAACGGCGA..............................................................................................................................................................................23118.001810701000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGG.................................................................................................................................................................................21112.00123702000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGC..............................................................................................................................................................................2419.0090306000
...............................................................................................................................................................................................................GCATTGTATGACCTGCTTAAC....................................................................................................................................2118.0080701000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGAC.............................................................................................................................................................................2518.0080404000
...................................................................................................................................................................TAAGTAGTGGATACAAACGGCGAC.............................................................................................................................................................................2417.0070700000
..............................................................................................................................................................................................................CGCATTGTATGACCTGCTTAACT...................................................................................................................................2316.0060501000
................................................................................................................................................................................................................CATTGTATGACCTGCTTAACC...................................................................................................................................2115.0050500000
..................................................................................................................................................................CTAAGTAGTGGATACAAAC...................................................................................................................................................................................1914.0040301000
...................................................................................................................................................................TAAGTAGTGGATACAAACGGCG...............................................................................................................................................................................2213.0030201000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGT..............................................................................................................................................................................2413.0031101000
.................................................................................................................................................................................................................ATTGTATGACCTGCTTAACT...................................................................................................................................2013.0031200000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGATT............................................................................................................................................................................2612.0020101000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCC...............................................................................................................................................................................2312.0020002000
...................................................................................................................................................................TAAGTAGTGGATACAAACGGC................................................................................................................................................................................2112.0020101000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGAA.............................................................................................................................................................................2512.0020200000
................................................................................................................................................................................................................CATTGTATGACCTGCTTAACTT..................................................................................................................................2211.0010100000
................................................................................................................................................................................................................CATTGTATGACCTGCTTAAC....................................................................................................................................2011.0010100000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGA.................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................CGCATTGTATGACCTGCTTAAC....................................................................................................................................2211.0010100000
....................................................................................................................................................................AAGTAGTGGATACAAACGGCGA..............................................................................................................................................................................2211.0011000000
...............................................................................................................................................................................................................GCATTGTATGACCTGCTTAA.....................................................................................................................................2011.0010001000
...................................................................................................................................................................TAAGTAGTGGATACAAACGGCGATT............................................................................................................................................................................2511.0010001000
...............................................................................................................................................................................................................GCATTGTATGACCTGCTTAAT....................................................................................................................................2111.0010001000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGCGA...............................................................................................................................................................................2311.0011000000
................................................................................................................................................................................................................CATTGTATGACCTGCTTAACG...................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................GCATTGTATGACCTGCTTAACA...................................................................................................................................2211.0010100000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGGCGAGA............................................................................................................................................................................2611.0010100000
..................................................................................................................................................................CTAAGTAGTGGATACAAACGT.................................................................................................................................................................................2111.0010001000
droYak3
GTCAA--AGTCAACAT-TAATT--A----GTTATTTATT-------GAAGAGCATT---------------------------------------------------------------ATGC--TTCGAAGT--TTT---------AAAAAAATTATATATTTAAGTAGTGGATACAAAAGGCGATT-GATATAA-AAA---TGTCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATCCCAACTTACATCA---------------------------------------------------------------------------------------------------ATTASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................24124940.00249400182249824172500000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACT...................................................................................................................................2213854.003854103794590000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................2311165.0011650210351270100000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACC...................................................................................................................................221937.009370093700000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................231474.0047402428440000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGC................................................................................................................................................................................221293.0029300280130000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGG.................................................................................................................................................................................211194.0019400178160000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................241160.0016000146130100000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAAC....................................................................................................................................211156.001560015510000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................241140.0014000291110000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................25194.0094008860000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................24183.00830014690000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................22148.0048003990000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................25140.0040003730000000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAAC....................................................................................................................................22130.0030002910000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................24128.0028002800000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGT..............................................................................................................................................................................24127.00270017100000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGC................................................................................................................................................................................21122.0022002020000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAA.............................................................................................................................................................................25122.0022002200000000
.................................................................................................................................................................................................................ATTGTATGGCCTACTTAACT...................................................................................................................................20117.0017001700000000
....................................................................................................................................................................AAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................22116.0016001510000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAG..................................................................................................................................................................................20116.0016001510000000
................................................................................................................................................................................................................CATTGTATGGCCTACTTAACT...................................................................................................................................21115.0015001320000000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACTT..................................................................................................................................23115.0015001500000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATT-...........................................................................................................................................................................25112.0012001200000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCC...............................................................................................................................................................................23110.0010001000000000
......................................................................................................................................................................GTAGTGGATACAAAAGGCGA..............................................................................................................................................................................2018.00800700100000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAACT...................................................................................................................................2317.00710600000000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACA...................................................................................................................................2216.00600600000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCA...............................................................................................................................................................................2316.00600600000000
........................................................................................................................................................................AGTGGATACAAAAGGCGA..............................................................................................................................................................................1816.00600420000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGATT-...........................................................................................................................................................................2616.00600600000000
................................................................................................................................................................................................................CATTGTATGGCCTACTTAACC...................................................................................................................................2116.00600600000000
.......................................................................................................................................................................TAGTGGATACAAAAGGCGA..............................................................................................................................................................................1915.00500500000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................2315.00500050000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCT...............................................................................................................................................................................2313.00300300000000
.............................................................................................................................................................................................................TCGCATTGTATGGCCTACTTAACT...................................................................................................................................2413.00300300000000
....................................................................................................................................................................AAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................2113.00300300000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGG.................................................................................................................................................................................2013.00300300000000
...........................................................................................................................................................................................................TGTCGCATTGTATGGCCTACTTAACT...................................................................................................................................2612.00200020000000
....................................................................................................................................................................AAGTAGTGGATACAAAAGG.................................................................................................................................................................................1912.00200200000000
.....................................................................................................................................................................................................AAA---TGTCGCATTGTATGGC.............................................................................................................................................1912.00200200000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAG.............................................................................................................................................................................2512.00200200000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATA-...........................................................................................................................................................................2512.00200200000000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAACC...................................................................................................................................2312.00200200000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGG................................................................................................................................................................................2212.00200110000000
.................................................................................................................................................................................................................ATTGTATGGCCTACTTAACC...................................................................................................................................2012.00200200000000
..................................................................................................................................................................................................AA-AAA---TGTCGCATTGTATGGCCTACT........................................................................................................................................2612.00200200000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCCT..............................................................................................................................................................................2412.00200020000000
droSec2
GTCAA--AGTCAACAT-TAAAT--A----GTGATATATG-------TCAGAGTATTGTCGGAATAAATATAATAATAA----------------------------------TCGGAAA-----TAT--------------------TTAGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAA-AAG---TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAACATA----AAA--TGCTAAATATTACTTATAATTTTGTGAGCTAGGATAAAGTACAAAAGAATT------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................24129096.00290969922892669
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................2512710.00271011026927
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................2312196.0021965021838
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................2411998.0019985019894
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................231460.004601404451
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGC................................................................................................................................................................................221370.00370003682
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGG.................................................................................................................................................................................211245.00245002441
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................22199.009900981
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAA.............................................................................................................................................................................25196.009600960
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................25183.008300830
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................24179.007910780
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................26174.007400740
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATA............................................................................................................................................................................25163.006300630
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGC................................................................................................................................................................................21162.006200611
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................24151.005100510
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACT...................................................................................................................................22135.003540310
....................................................................................................................................................................AAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................22130.003000300
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGATA............................................................................................................................................................................26129.002900290
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGT..............................................................................................................................................................................24124.002400240
..................................................................................................................................................................TTAAGTAGTGGATACAAAA...................................................................................................................................................................................19122.002200220
..................................................................................................................................................................TTAAGTAGTGGATACAAAAG..................................................................................................................................................................................20120.002000200
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCA...............................................................................................................................................................................23117.001700170
....................................................................................................................................................................AAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................23115.001500150
..................................................................................................................................................................TTAAGTAGTGGATACAAA....................................................................................................................................................................................18112.001200120
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAAC....................................................................................................................................22111.001100110
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................25111.001100110
........................................................................................................................................................................AGTGGATACAAAAGGCGA..............................................................................................................................................................................18110.001000100
.................................................................................................................................................................TTTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................2419.0090090
...................................................................................................................................................................TAAGTAGTGGATACAAAAGG.................................................................................................................................................................................2018.0080080
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGCGA...............................................................................................................................................................................2318.0080080
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAAA............................................................................................................................................................................2617.0070070
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAACT...................................................................................................................................2316.0060060
.....................................................................................................................................................................AGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................2116.0060060
.......................................................................................................................................................................TAGTGGATACAAAAGGCGA..............................................................................................................................................................................1914.0040040
...................................................................................................................................................................TAAGTAGTGGATACAAAA...................................................................................................................................................................................1814.0040040
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCC...............................................................................................................................................................................2314.0040040
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAAC....................................................................................................................................2113.0030030
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGATTT...........................................................................................................................................................................2713.0030030
................................................................................................................................................................................................................CATTGTATGGCCTACTTAACT...................................................................................................................................2112.0020020
........................................................................................................................................................................AGTGGATACAAAAGGCGAT.............................................................................................................................................................................1912.0020020
....................................................................................................................................................................AAGTAGTGGATACAAAAGGC................................................................................................................................................................................2012.0020020
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGATC............................................................................................................................................................................2612.0020020
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATC............................................................................................................................................................................2512.0020020
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGAC.............................................................................................................................................................................2412.0020020
......................................................................................................................................................................GTAGTGGATACAAAAGGCGA..............................................................................................................................................................................2012.0020020
....................................................................................................................................................................AAGTAGTGGATACAAAAGG.................................................................................................................................................................................1912.0020020
.......................................................................................................................................................................TAGTGGATACAAAAGGCGAT.............................................................................................................................................................................2012.0020020
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................2311.0010010
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATTC...........................................................................................................................................................................2611.0010010
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCAT..............................................................................................................................................................................2311.0010010
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGACC............................................................................................................................................................................2611.0010010
.........................................................................................................................................................................GTGGATACAAAAGGCGAT.............................................................................................................................................................................1811.0010010
droSim2
GTCAA--AGTCAACAT-TAAAT--A----GTGATATATG-------TCAGAGTATTGTCGGAATAAATATAATAATAA----------------------------------TCGGAAA-----TAT--------------------TTAGAAATTATATATTTAAGTAGTGGATACAAAAGGCGATTTGATATAA-AAG---TATCGCATTGTATGGCCTACTTAACTAGCTGATTTTGTATTCCAACATA----AAA--TGCTAAATATTACTTATAATTTTGTGAGCTAGGATAAAGTACAAAAGAATT------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................2415566.005566001401020012911308810328102000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACT...................................................................................................................................221695.0069500616200000007700000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAACT...................................................................................................................................231307.0030710296000000001000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................241289.0028900590000062022200000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................231289.0028900352000087023601000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................251275.002750017300002316021600000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAAC....................................................................................................................................221271.0027100219001000005100000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................241140.0014000040000311009500000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................241139.001390030000046012600000
................................................................................................................................................................................................................CATTGTATGGCCTACTTAACT...................................................................................................................................21181.0081007600000000500000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................23174.007400040000181104100000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGC................................................................................................................................................................................22165.0065006001001005700000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGG.................................................................................................................................................................................21132.0032001006000701800000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACC...................................................................................................................................22123.0023002300000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGT..............................................................................................................................................................................24121.0021000000000002100000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAACC...................................................................................................................................23118.0018001800000000000000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAAC....................................................................................................................................21117.0017001100000000600000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATA............................................................................................................................................................................25114.0014000000000201200000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAG..................................................................................................................................................................................20113.001300100900000300000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................25113.0013000000001001200000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACTT..................................................................................................................................2318.00800800000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGG..............................................................................................................................................................................2318.00800000000000800000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACG...................................................................................................................................2218.00800800000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGAA.............................................................................................................................................................................2518.00800000001400300000
............................................................................................................................................................................................................ATCGCATTGTATGGCCTACTTAACT...................................................................................................................................2518.00800700000000100000
..................................................................................................................................................................TTAAGTAGTGGATACAAAA...................................................................................................................................................................................1918.00800000800000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGC................................................................................................................................................................................2118.00800000000000800000
............................................................................................................................................................................................................ATCGCATTGTATGGCCTACTT.......................................................................................................................................2117.00700700000000000000
....................................................................................................................................................................AAGTAGTGGATACAAAAGGCGA..............................................................................................................................................................................2216.00600020000210100000
...........................................................................................................................................................................................................TATCGCATTGTATGGCCTACTTAACT...................................................................................................................................2615.00500500000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAA....................................................................................................................................................................................1815.00500000300000200000
................................................................................................................................................................................................................CATTGTATGGCCTACTTAACTT..................................................................................................................................2215.00500500000000000000
....................................................................................................................................................................AAGTAGTGGATACAAAAGGCGAT.............................................................................................................................................................................2315.00500000100210100000
............................................................................................................................................................................................................ATCGCATTGTATGGCCTACTTAAC....................................................................................................................................2415.00500300000000200000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACT........................................................................................................................................1814.00400400000000000000
........................................................................................................................................................................AGTGGATACAAAAGGCGA..............................................................................................................................................................................1814.00400000000011200000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCG...............................................................................................................................................................................2214.00400100000000300000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGATT............................................................................................................................................................................2613.00300000000000300000
......................................................................................................................................................................................................AG---TATCGCATTGTATGGCC............................................................................................................................................1913.00300200000000100000
.....................................................................................................................................................................................................AAG---TATCGCATTGTATGGCC............................................................................................................................................2013.00300300000000000000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTT.......................................................................................................................................1913.00300300000000000000
............................................................................................................................................................................................................ATCGCATTGTATGGCCTACT........................................................................................................................................2013.00300300000000000000
...........................................................................................................................................................................GGATACAAAAGGCGA..............................................................................................................................................................................1513.00300000000120000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCGGA.............................................................................................................................................................................2512.00200000000000200000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCCG..............................................................................................................................................................................2412.00200000000000200000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAA..................................................................................................................................................................................2012.00200100000000100000
..............................................................................................................................................................................................................CGCATTGTATGGCCTACTTAACG...................................................................................................................................2312.00200200000000000000
...........................................................................................................................................................................................................TATCGCATTGTATGGCCTACT........................................................................................................................................2112.00200200000000000000
................................................................................................................................................................................................ATAA-AAG---TATCGCATTGTATGGCC............................................................................................................................................2412.00200200000000000000
.................................................................................................................................................................................................TAA-AAG---TATCGCATTGTATGGCC............................................................................................................................................2312.00200200000000000000
.........................................................................................................................................................................GTGGATACAAAAGGCGAT.............................................................................................................................................................................1812.00200000000010100000
...............................................................................................................................................................................................TATAA-AAG---TATCGCATTGTATGGCC............................................................................................................................................2512.00200200000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCTC..............................................................................................................................................................................2412.00200100000000100000
...........................................................................................................................................................................................................TATCGCATTGTATGGCCTACTTAAC....................................................................................................................................2512.00200200000000000000
................................................................................................................................................................................................................CATTGTATGGCCTACTTAAC....................................................................................................................................2012.00200100000000100000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGATC............................................................................................................................................................................2512.00200000000000200000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGGCGC..............................................................................................................................................................................2311.00100000000000100000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTAACTC..................................................................................................................................2311.00100100000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAAGG.................................................................................................................................................................................2011.00100000000000100000
...................................................................................................................................................................TAAGTAGTGGATACAAAA...................................................................................................................................................................................1811.00100000000000100000
...................................................................................................................................................................TAAGTAGTGGATACAAAAG..................................................................................................................................................................................1911.00100000100000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAAGGCCC..............................................................................................................................................................................2411.00100000000000100000
...............................................................................................................................................................................................................GCATTGTATGGCCTACTTACT....................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................TAGTGGATACAAAAGGCGA..............................................................................................................................................................................1911.00100010000000000000
...............................................CAGAGTATTGTCGGAATAAATATA.................................................................................................................................................................................................................................................................................................2411.00100100000000000000
........................................................................................................................................................................AGTGGATACAAAAGGCGG..............................................................................................................................................................................1811.00100100000000000000
dm3
GTTAA--AGTCAACACATAAGT--A----GTGATA-ATG-------CAAGAGTATTGT-----------------------------------------------------ATCGGAA--------------T--TAA---------TTAGAAATTATATATTTAAGTAGTGGATACAAAGGGCGATTTGATATAA-AAG---TGTCGCATTGTATGACCTACTTAACTAGCTGATTTTGTATCCCAACATA----ATA--GGTTAAAAATTAATTCGAATTTTGTGAGCTGGGATAAAGTACCAAAGAATT-------------------------------TTGAAAACTGCACATTCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGA..............................................................................................................................................................................24112964.00129640000100135210100000000000000000000000100010000010000000000100000000000000000000000020182422000001000030000012000030010522101600000000200000000000000030030706000000000000000000001100004000000000000030000000000700000110000000000003030003205720039000058228510000000020000002000000000141061100000000000000120635935053130000000000010000202095410111047892312000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGG.................................................................................................................................................................................2112968.00296800000000000000000000000000000000003840000100000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000040011030000200000001000000000000000000000000000000010000000000000000000000001130000010132040000221500000000020000000000000000071076000000000000030001892238004000000000000000010003210000002660001000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCG...............................................................................................................................................................................2311844.00184400000000500000000000000000000000000000000000000000000000000000000000000000000000010622300000000010000000000000000310001000000000000000000000070023000000000000000000000000000000000000000000000000001000000000000000000001000100020118011700006541000000000000000000000400000100250000000000000220070174000300000000000000003000512100010911310000000
...............................................................................................................................................................................................................GCATTGTATGACCTACTTAACT...................................................................................................................................2211834.001834000000052710000000000000000000000000000000000000000000000000000000000000000000000007340649676700120300100350010000100001443702100000000200000000000000012532000000000000000000000010000000000000000000000000000000000000000000000000000000150720130000590000000000000000000000000001000000000000000000000531400000000000000000000000100000000010000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGC................................................................................................................................................................................2211769.001769000000001000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000001000300200000000000000000000100000000000000000000000000000000000000000000000000010000000412120000380000000000000000000000000001001000000000000001101496952005000000000000002000008220120842314830003000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGG..................................................................................................................................................................................2011041.00104100000000000000000000000000000000004430000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000010060000000000000000000000000000000000000000000000000020000000000000000000000100000000310700007400000000000000000000000000020022000000000000000004550500000000100001000100000400000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGCGAT.............................................................................................................................................................................241963.009630000000041000000000000000000000000000000000000000000000000000000000000000000000004068150000000000000000000000000050000000000000000000000000000004600000000000000000000000000001000000000000000000000000000000000000000000000000000013001000060330000000000000000000000000000000000000000000000000506196010000000000000000000005000000012100000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGC................................................................................................................................................................................211472.004720000000000000000000000000000000000000000000000000000007000000000000000000000000001001000000000000000000000000000000000000000000000000000000200180000000000000000000000000000000000000000000000000000100000000000000100000000000000100700000000000000000000000000000000010011000000000000000002161490000000000000000000000029301220047170000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGCG...............................................................................................................................................................................221329.0032900000000100000000000000000000000000000000000000000000000000000000000000000000000000233000000000000000000000000003000000000000000000000000000300600000000000000000000000000000000000000000000000000000000000000000000000000000001014003000091400000000010000000000000000000001000000000000000001895500000000100000000000000100001102240000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGCGA..............................................................................................................................................................................231266.00266000000001000000000000000000000000000000000000000000000000000000000000000000000000001480000000000000000000001000001000000000000000000000000001000000000000000000000000002000000000000000000000000000000000000000000000000000000000130000000221400000000000000000000000000000000000000000000000001256000000000000000000000000210000003250000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGG..............................................................................................................................................................................241246.00246000000000000000000000000000000000000000000000000000000000000000000000000000000000001867000000000000000000000000003460200000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129001000000000000000000000000000000000000000000000022300000000000000000000000000000000010000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAG...................................................................................................................................................................................191179.00179000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000116000000000000000100000000000000000000000000
..............................................................................................................................................................................................................CGCATTGTATGACCTACTTAAC....................................................................................................................................221175.0017500000000310000000000000000000000000000000000000000000000000000000000000000000000080216800000000000000000000000000178000000000000000000000000001220500000000000000000000000000000000000000000000000000000000000000000000000000000050001010000370000000001000000000000000000000000000000000000000111000000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGG.................................................................................................................................................................................201150.00150000000000000000000000000000000000065000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000220000000000000000000000000000000200000000000000000145800100000000000000000000300000001000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGC..............................................................................................................................................................................241136.0013600000000000000000000000000000000000000000000000000000000000000000000000000000000020612000000000100000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022130000000000000000000000000000000100000000000000000413400000000000000000000000000000000000000000
..............................................................................................................................................................................................................CGCATTGTATGACCTACTTAACT...................................................................................................................................231108.00108000000010200000000000000000000000000000000000000000000000000000000000000000000000150621900001000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGAT.............................................................................................................................................................................251100.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000720000000000000000000000000001000200000000000000000402400000000000000000000000800000000040000000
..................................................................................................................................................................TTAAGTAGTGGATACAAA....................................................................................................................................................................................18192.00920000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016000000000000000000000000000000000000000000000000008300000000000000000000000000000000000000000
................................................................................................................................................................................................................CATTGTATGACCTACTTAACT...................................................................................................................................21187.008700000001500000000000000000000000000000000000000000000000000000000000000000000000040193100000000010000000000000000760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000000000000000001000000000000000000000000000000001800000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGG................................................................................................................................................................................22153.005300000000000000000000000000000000001000000000000000000000000000000000000000000000000150000000000000000000000000020000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000101900000000030000001000000000000002000000000000000000200000000000000000000000300000000010000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGT..............................................................................................................................................................................24137.00370000000000000000000000000000000000000000000000000000000000000000000000000000000001011200000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002100000000000000000000000000000010000000000000000008600000000000000000000000000000000010000000
....................................................................................................................................................................AAGTAGTGGATACAAAGGG.................................................................................................................................................................................19136.00360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013500000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGG..................................................................................................................................................................................19130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000062100000000000000000000000100000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAG...................................................................................................................................................................................18124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000001800000000000000000000000000000000000000000
..............................................................................................................................................................................................................CGCATTGTATGACCTACTTAA.....................................................................................................................................21122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000001012000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGG................................................................................................................................................................................21122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000040000000000000000040006000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................AAGTAGTGGATACAAAGGGCGA..............................................................................................................................................................................22115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009500000000000000000000000000000000000000000
...............................................................................................................................................................................................................GCATTGTATGACCTACTTAAC....................................................................................................................................21115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000014300000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100100200000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGAA.............................................................................................................................................................................25115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007300000000000000000000000400000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGA................................................................................................................................................................................22110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010001400000000000000000000000100010100000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGCGA...............................................................................................................................................................................2319.009000000003000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGT..................................................................................................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGAC.............................................................................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004300000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGCGATT............................................................................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006200000000000000000000000000000000010000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGT................................................................................................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000100000000000000000
....................................................................................................................................................................AAGTAGTGGATACAAAGG..................................................................................................................................................................................1817.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGT.................................................................................................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCC...............................................................................................................................................................................2316.006000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCT...............................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000010000000000000000001200000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGC.................................................................................................................................................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTAGTGGATACAAAGGGCGG..............................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAGTAGTGGATACAAAGGGC................................................................................................................................................................................2015.005000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000
...............................................................................................................................................................................................................GCATTGTATGACCTACTTAACC...................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGGCGATT............................................................................................................................................................................2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTGGATACAAAGGA.................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000300000000000000000000000000000000000000000
droEug1
GTCGA--ATTCAACAT-TA---TTA--------------------------------T-----------------------------------------------------ATACAAA--------------TTAAT-------TTTACAAAAATCATATACTTAAGTAGTGGATACAAATTGCGATTTTAA--AA-TAT---ACTCGCATTGTATGGCCTACTTAGTTAGTTGATTTTTAACACCGTCA-------A-----------------------------------GATAAAAGGCAAGTGAATGAAATTAAGTC---AAGAAATT----------------------TGTTCSizeHit CountTotal NormTotal
No Reads
droBia1
GTCCA--TTTCTTCAT-TTTAA--A----GTAATA-GAACAATTTC---------------------------AATAT----------------------------------TTTAAAA-----TAT-----TTAGA-------ATTTAGAAAATCATTTGTTTAAGTAGTGCATACAAAAGGCGATTTGCTATCA-AAC---GTTCGCATTGTATGCCCTACTTAACTAGTTGGTTTT-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTCCT--CTTTTACAT-TTATT--A----GTAA---------ATTGGAAA---ATTGT-----------------------------------------------------TTTTGAA--------------A--TTT---------CAAAAAATCATACATTTAAGTAGTGGATACAAAAGGCGATTTGCTAATAAAAT---GTTCGCATTGTATGGCCTACTTAACTAACTGATTTTTTTTAACAACATT----AAAAT--------A-----------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
GACCA--TGCCAGTGT-TTAA---A----AT---------ACAATA----------------------------AAAG----------------------------------ATT----ATGTTTT--------GTTT---------AAAAAAATCATGTATTTAAGTAGTGGATACAAAAGGCGATTTACAAAATAAAT---GTTCGCATTGTATGCCCTACTTAACTAGCAGGTTTT-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GACAA--TGTCGCCGT-TTAA---A----GT---------AGATTA----------------------------ATAA----------------------------------CTAA----AATTCTGT---------T------ATAAAAAAAATCATATGTTTAAGTAGTGGATACAAATGGCGACTTGCAAACGAAAT---GTTCGCATTGTATGTCCTACTTAAGTAGCTGATTTTTCCAAG---CGT-------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GTTAT--ACAGAACAC-TA---TA-----ATA----AAA-------GAAAAGTGTT---------------------------------------------------------------ATAT--TTTTAACA--TAT---------TAAAAAATTATACGTTTAAGTAGTGGATACAAAAGGCGATTTGTATAACGAAA---GTTCGCATTGTATGTCCTACTTAAGTGGCTGATTTTTTCAAGCAACATC----AAAAA--------ATTGT----------------------------------------------TTA----GAGGT------------------------GAATSizeHit CountTotal NormTotal
No Reads
droKik1
GTTTA--TTCCGGCTT-TCAT---ATA---------GA----ATCA----------------------------CTATCTTGAATTCCTGACCTAAAATAAGGACATACATATCTGTT----------------AATT---------AAGAAAATCGTATGTTTAAGTAGTGGATACAA-CGGCGATTGAACACAATAAT---CTTCGCAGTGTGTTACCTACTTAATTAGTCGATTTT-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTTAA--AGTCGGCTA-AAATA--A----GTTTCA---------------------------------------------AGCATTTCAAGCCAAAGTTT---TCATAAATATCTGTG---------------------------CAAACTAAATCATGTGTTTAAGTAGGCAATACAT-GGGCGACTAAATAAAA-TAT---ACTCGCAATGTATAGCCTACATAACTAGTTGATTTTTGCAAGCATCC---ATTACA--A-------ATTAAATACAATTTTAA----------------------------------GT----TGAAGTGATTATTGTTATTGAAA--TCCAGCTACSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................2316998.0069985595510025724
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGG.................................................................................................................................................................................201371.003710191177003
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGC................................................................................................................................................................................211299.00299022967021
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCG...............................................................................................................................................................................221257.00257119557022
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................22178.007806216000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GG..................................................................................................................................................................................19148.004803018000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGAC.............................................................................................................................................................................24144.00440440000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................24142.00420384000
...............................................................................................................................................................................................................GCAATGTATAGCCTACATAACT...................................................................................................................................22139.00390345000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGG..............................................................................................................................................................................23121.00210129000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGAA.............................................................................................................................................................................24115.00150132000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGAT.............................................................................................................................................................................24114.00140140000
....................................................................................................................................................................AAGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................21113.00130103000
...............................................................................................................................................................................................................GCAATGTATAGCCTACATAACC...................................................................................................................................22111.00110110000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGC..............................................................................................................................................................................23110.0010019000
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGCGAC.............................................................................................................................................................................23110.00100100000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGT..............................................................................................................................................................................2316.006032010
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGACT............................................................................................................................................................................2516.006060000
..................................................................................................................................................................TTAAGTAGGCAATACAT-G...................................................................................................................................................................................1816.006033000
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGCG...............................................................................................................................................................................2114.004022000
...............................................................................................................................................................................................................GCAATGTATAGCCTACATAAC....................................................................................................................................2114.004040000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-GGG.................................................................................................................................................................................2114.004022000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCC...............................................................................................................................................................................2214.004040000
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGC................................................................................................................................................................................2014.004040000
.....................................................................................................................................................................AGTAGGCAATACAT-GGGCGACTA...........................................................................................................................................................................2313.003030000
....................................................................................................................................................................AAGTAGGCAATACAT-GGG.................................................................................................................................................................................1813.003012000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGT.................................................................................................................................................................................2013.003012000
....................................................................................................................................................................AAGTAGGCAATACAT-GGGC................................................................................................................................................................................1913.003030000
....................................................................................................................................................................AAGTAGGCAATACAT-GGGCGACT............................................................................................................................................................................2313.003021000
............................................................................................................................................................................................................CTCGCAATGTATAGCCTACATA......................................................................................................................................2213.003021000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGAAA............................................................................................................................................................................2512.002020000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-GGGCG...............................................................................................................................................................................2312.002011000
...................................................................................................................................................................TAAGTAGGCAATACAT-GGG.................................................................................................................................................................................1912.002002000
.......................................................................................................................................................................TAGGCAATACAT-GGGCGA..............................................................................................................................................................................1812.002011000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGATA............................................................................................................................................................................2512.002020000
...............................................................................................................................................................................................................GCAATGTATAGCCTACATAACTT..................................................................................................................................2311.001010000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-....................................................................................................................................................................................1811.001001000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCGAG.............................................................................................................................................................................2411.001010000
.....................................................................................................................................................................AGTAGGCAATACAT-GGGCGA..............................................................................................................................................................................2011.001010000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGCCC..............................................................................................................................................................................2311.001001000
.....................................................................................................................................................................AGTAGGCAATACAT-GGGCGACC............................................................................................................................................................................2211.001010000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-GG..................................................................................................................................................................................2011.001001000
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGCGAA.............................................................................................................................................................................2311.001010000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-GGGC................................................................................................................................................................................2211.001010000
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGCGAT.............................................................................................................................................................................2311.001010000
..................................................................................................................................................................TTAAGTAGGCAATACAT-GGGT................................................................................................................................................................................2111.001000010
...................................................................................................................................................................TAAGTAGGCAATACAT-GGGCGACC............................................................................................................................................................................2411.001010000
.................................................................................................................................................................TTTAAGTAGGCAATACAT-GGGCGAA.............................................................................................................................................................................2511.001010000
droBip1
GTCCA--AGTTGAAAA-TA---TC--------------------------------TTCCAAACAATATT-------------------------------------------------ATCT--TCTTAATA--TA--------CAACTTAAATCATGTGTTTAAGTAGGCAATACAT-GGGCGATTCATTA------C---ATTCGCAATGTATGGCTTACATAACTAGTTGATTTTTGAAGTCATCC---ATTCCA--------AAGTTAATTTCTATCTTAT----------------------------------AT---GTGAAGTG----------------------TGTATSizeHit CountTotal NormTotal
No Reads
dp5
GTCAA--AGTCAACAG-AA---CT--------------------------------GTGCGATTAGAGTTATCAATAG----------------------------------GCAGGT-----CCTCT---------C---------AAAATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCTCGATT---------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................2315183.005183068728120168400000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAAT...................................................................................................................................221711.00711051470018910000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................221528.00528090215022300000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................231472.00472025293015400000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................211198.001980886010400000
.................................................................................................................................................................CCTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................231167.0016703611601500000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................221130.001300355504000000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGAC.............................................................................................................................................................................23178.007800770100000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGG.................................................................................................................................................................................20166.0066022803600000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAA....................................................................................................................................21160.0060063601800000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGC................................................................................................................................................................................20150.0050001903100000
..............................................................................................................................................................................................................CGCATTGTGTGACCTACTTAAA....................................................................................................................................22146.004602703700000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAAC...................................................................................................................................22146.004600460000000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................24128.002806170500000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGC..............................................................................................................................................................................23126.002600701900000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................21126.002605801300000
.............................................................................................................................................................................................................TCGCATTGTGTGACCTACTTAAA....................................................................................................................................23118.001800601200000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGT..............................................................................................................................................................................23118.001801601100000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGG..............................................................................................................................................................................23117.00170080900000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGATT............................................................................................................................................................................24114.001402110100000
.................................................................................................................................................................CCTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................22113.001301110100000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GG..................................................................................................................................................................................19112.00120030900000
............................................................................................................................................................................................................TTCGCATTGTGTGACCTACTTA......................................................................................................................................22111.001101001000000
....................................................................................................................................................................AAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................21111.00110820100000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGAC.............................................................................................................................................................................24110.00100080200000
.................................................................................................................................................................CCTAAGTAGTTGATACAA-GGG.................................................................................................................................................................................2118.0080080000000
............................................................................................................................................................................................................TTCGCATTGTGTGACCTACTTAAA....................................................................................................................................2418.0080010700000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGAA.............................................................................................................................................................................2417.0070230200000
.............................................................................................................................................................................................................TCGCATTGTGTGACCTACTTAA.....................................................................................................................................2217.0070010600000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGATA............................................................................................................................................................................2517.0070060100000
.................................................................................................................................................................CCTAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................2417.0070230200000
................................................................................................................................................................................................................CATTGTGTGACCTACTTAAAT...................................................................................................................................2117.0070330100000
................................................................................................................................................................................................................CATTGTGTGACCTACTTAAATG..................................................................................................................................2216.0060020400000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGG.................................................................................................................................................................................1916.0060000600000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGATC............................................................................................................................................................................2415.0050050000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAA.....................................................................................................................................2015.0050110300000
..............................................................................................................................................................................................................CGCATTGTGTGACCTACTTAA.....................................................................................................................................2115.0050000500000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGATA............................................................................................................................................................................2414.0040020200000
.....................................................................................................................................................................AGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................2014.0040200200000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGG..............................................................................................................................................................................2213.0030010200000
............................................................................................................................CTCT---------C---------AAAATAATCGGGCAC......................................................................................................................................................................................................2013.0030030000000
.................................................................................................................................................................................................................ATTGTGTGACCTACTTAAAT...................................................................................................................................2013.0030010200000
............................................................................................................................................................................................................TTCGCATTGTGTGACCTACTTAA.....................................................................................................................................2313.0030100200000
.............................................................................................................................TCT---------C---------AAAATAATCGGGCAC......................................................................................................................................................................................................1913.0030030000000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGC..............................................................................................................................................................................2213.0030030000000
....................................................................................................................................................................AAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................2213.0030210000000
.....................................................................................................................................................................AGTAGTTGATACAA-GGGCGATAATG.........................................................................................................................................................................2513.0030010200000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGATTT...........................................................................................................................................................................2512.0020010100000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGAG.............................................................................................................................................................................2412.0020200000000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGATC............................................................................................................................................................................2512.0020020000000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGT..............................................................................................................................................................................2211.0010000100000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCCT..............................................................................................................................................................................2211.0010000100000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAATA..................................................................................................................................2311.0010010000000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGG................................................................................................................................................................................2111.0010010000000
......................................................................................................................................................................GTAGTTGATACAA-GGGCGA..............................................................................................................................................................................1911.0010000100000
.....................................................................................................................T-----CCTCT---------C---------AAAATAATCGGGCA.......................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAATG..................................................................................................................................2311.0010000100000
droPer2
GTCGA--AGTCAACAG-AA---CT--------------------------------GTGCGATTAGAGTTATCAATAG----------------------------------GCAGGT-----CCTCT---------C---------AAAATAATCGGGCACCTAAGTAGTTGATACAA-GGGCGATAATGTAAAAGAAC---TTTCGCATTGTGTGACCTACTTAAATGCCCGATT---------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................231877.00877391234401220
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................211138.00138121017000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAAT...................................................................................................................................22198.009831463000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................22163.006349112010
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGG..............................................................................................................................................................................23155.00555401000
.............................................................................................................................TCT---------C---------AAAATAATCGGGCAC......................................................................................................................................................................................................19122.00221912000
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................22118.00184212000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGC..............................................................................................................................................................................23115.00151005000
............................................................................................................................CTCT---------C---------AAAATAATCGGGCAC......................................................................................................................................................................................................2019.009900000
.................................................................................................................................................................CCTAAGTAGTTGATACAA-GGGCG...............................................................................................................................................................................2317.007420010
...................................................................................................................................................................TAAGTAGTTGATACAA-GGGCGAT.............................................................................................................................................................................2316.006402000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAA....................................................................................................................................2115.005203000
..........................................................................................................................................................................................TAATGTAAAAGAAC---TTTC.........................................................................................................................................................1814.004400000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GG..................................................................................................................................................................................1914.004103000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGG.................................................................................................................................................................................2014.004112000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGAC.............................................................................................................................................................................2414.004400000
.............................................................................................................................................................................................................TCGCATTGTGTGACCTACTTAAA....................................................................................................................................2313.003003000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGT..............................................................................................................................................................................2313.003102000
................................................................................................................................................................................................................CATTGTGTGACCTACTTAAATG..................................................................................................................................2213.003300000
.................................................................................................................................................................CCTAAGTAGTTGATACAA-GGGC................................................................................................................................................................................2212.002200000
..............................................................................................................................CT---------C---------AAAATAATCGGGCAC......................................................................................................................................................................................................1812.002200000
............................................................................................................................................................................................................TTCGCATTGTGTGACCTACTTAAA....................................................................................................................................2412.002002000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGG................................................................................................................................................................................2112.002200000
............................................................................................................................................................................................................TTCGCATTGTGTGACCTACTTA......................................................................................................................................2212.002002000
.......................................................................................................................................................................TAGTTGATACAA-GGGCGA..............................................................................................................................................................................1812.002101000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGAA.............................................................................................................................................................................2411.001001000
............................................................................................................................................................................................................TTCGCATTGTGTGACCTACTTAA.....................................................................................................................................2311.001001000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCGCC.............................................................................................................................................................................2411.001100000
.....................................................................................................................................................................AGTAGTTGATACAA-GGGCG...............................................................................................................................................................................1911.001001000
..................................................................................................................................................................CTAAGTAGTTGATACAA-GGGCA...............................................................................................................................................................................2211.001001000
.....................................................................................................................................................................AGTAGTTGATACAA-GGGCGA..............................................................................................................................................................................2011.001100000
.....................................................................................................................................................................AGTAGTTGATACAA-GGGCGATAATG.........................................................................................................................................................................2511.001001000
................................................................................................................................................................................................................CATTGTGTGACCTACTTAAAT...................................................................................................................................2111.001001000
.................................................................................................................................................................................................................ATTGTGTGACCTACTTAAAT...................................................................................................................................2011.001001000
...........................................................................................................................CCTCT---------C---------AAAATAATCGGGCAC......................................................................................................................................................................................................2111.001100000
droWil2
TCTGA--AATCAACAA-ATAT---AGAAAGT-----------ATTGAAAAAGTG----------------TTCATTTG---------------------------------ATCTGGT-----------------CAT---------TGAAAAATGTTACACTTAAGTAGTTAATACAA-TGGCGATTCGTATTCC-ATTGTACATCGCATTGTGTGAGTTACTTTGTTGAGAGATTTT-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................23125007.0025007014902483820
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCG...............................................................................................................................................................................2211805.00180506017981
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................241762.007620707541
...................................................................................................................................................................TAAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................231592.005920605860
...............................................................................................................................................................................................................GCATTGTGTGAGTTACTTTGTT...................................................................................................................................22196.0096000960
...................................................................................................................................................................TAAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................22191.00910120790
.................................................................................................................................................................CTTAAGTAGTTAATACAA-TGGCG...............................................................................................................................................................................23164.0064000640
.................................................................................................................................................................CTTAAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................24135.0035000350
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGAA.............................................................................................................................................................................24128.0028000280
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGG.................................................................................................................................................................................20119.0019010180
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGG..............................................................................................................................................................................23115.0015000150
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGATT............................................................................................................................................................................25112.0012000120
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCA...............................................................................................................................................................................22112.0012000120
...................................................................................................................................................................TAAGTAGTTAATACAA-TGGCGATT............................................................................................................................................................................24110.0010000100
...................................................................................................................................................................TAAGTAGTTAATACAA-TGGCG...............................................................................................................................................................................21110.0010000100
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGC................................................................................................................................................................................2119.00900090
....................................................................................................................................................................AAGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................2119.00901080
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGC..............................................................................................................................................................................2319.00900090
..............................................................................................................................................................................................................CGCATTGTGTGAGTTACTTTGTT...................................................................................................................................2318.00800080
.....................................................................................................................................................................AGTAGTTAATACAA-TGGCGA..............................................................................................................................................................................2016.00600060
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGAC.............................................................................................................................................................................2415.00500050
....................................................................................................................................................................AAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................2215.00503020
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCT...............................................................................................................................................................................2214.00400040
..........................................................................................................................................................................................TTCGTATTCC-ATTGTACATC.........................................................................................................................................................2014.00400040
...............................................................................................................................................................................................................GCATTGTGTGAGTTACTTTG.....................................................................................................................................2013.00300030
..............................................................................................................................................................................................................CGCATTGTGTGAGTTACTTTG.....................................................................................................................................2113.00300030
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGT..............................................................................................................................................................................2313.00300030
...................................................................................................................................................................TAAGTAGTTAATACAA-TGGC................................................................................................................................................................................2013.00300030
...................................................................................................................................................................TAAGTAGTTAATACAA-TGGCGATA............................................................................................................................................................................2412.00200020
.............................................................................................................................................................................................................TCGCATTGTGTGAGTTACTTTG.....................................................................................................................................2212.00200020
................................................................................................................................................................................................................CATTGTGTGAGTTACTTTGTTG..................................................................................................................................2212.00200020
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGCGA...............................................................................................................................................................................2231.67500050
.......................................................................................................................................................................TAGTTAATACAA-TGGCGA..............................................................................................................................................................................1811.00100010
..................................................................................................................................................................TTAAGTAGTTAATACAA-T...................................................................................................................................................................................1811.00101000
...............................................................................................................................................................................................................GCATTGTGTGAGTTACTTTGTTA..................................................................................................................................2311.00100010
..............................................................................................................................................................................................................CGCATTGTGTGAGTTACTTTGT....................................................................................................................................2211.00100010
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGATA............................................................................................................................................................................2511.00100010
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCC...............................................................................................................................................................................2211.00100010
...................................................................................................................................................................TAAGTAGTTAATACAA-TGG.................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................AGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................2111.00100010
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGA.................................................................................................................................................................................2011.00100010
.......................................................................................................................................................................TAGTTAATACAA-TGGCGATT............................................................................................................................................................................2011.00100010
.................................................................................................................................................................CTTAAGTAGTTAATACAA-TGGCGAT.............................................................................................................................................................................2511.00100010
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGCG................................................................................................................................................................................2111.00100010
..................................................................................................................................................................TTAAGTAGTTAATACAA-TGGCGATC............................................................................................................................................................................2511.00100010
droVir3
ATCAGCAAATCGATAA-G-----------AC---------AAACTA-----------AAAAATTTAAATCATTGCTA----------------------------------------------------------AGGCTTGCTGCAATGAAAATTGAACGCTTAAGTAGTTAATACAA-GGGCGAGTTTTTT--C-TTG---CATCGCATTGTGTGACCTACTTAAATGACAAATTTT-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................2318526.0085261113826010100000000000000001000102625927390010102185611061711623362491921861750004692049270021312510010112975674551
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCG...............................................................................................................................................................................221517.005170011200000000000001000001000001000000000000001079143430513719242300045890000000100000013500
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................221474.004740001650000000000000000000000110000002180000010173371217171910700048107010001220000002101351
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAAT...................................................................................................................................221406.004060001000000000000000000000000000000000010000000213141231181811101712000213100000112700000033141513
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGC................................................................................................................................................................................21187.0087000380000000000000000000000000000000000000000000133584410001060000020000000000002
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGG.................................................................................................................................................................................20176.0076000160000000000000000000000000000000000000000021262929870001020000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGAT.............................................................................................................................................................................24167.006700028000000000000000000000000000000000000000000201075135000560000010000000002100
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGAA.............................................................................................................................................................................24153.0053000250000000000000000000000000001000000000000000011221300003110000000100000010001
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCG...............................................................................................................................................................................21132.00320015000000000000000000000000000000000000000000131122513000050000000000000000110
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAA....................................................................................................................................21129.00290005000000000000000000000000000000011000000001013050120000340000000100000010000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGC..............................................................................................................................................................................23127.002700040000000000000000000000000000000000000000000000101110001180000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGT..............................................................................................................................................................................23126.002600012000000000000000000000000000000000000000000001041000000260000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGG..............................................................................................................................................................................23126.00260007000000000000000000000000000000000000000000000031121000470000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGAC.............................................................................................................................................................................24125.00250006000000000000000000000000000000000000000001001140220000710000000000000000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAATT..................................................................................................................................23123.00230005000000000000000000000000000000000000000002014020001000030000001100000002100
.................................................................................................................................................................CTTAAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................24113.00130008000000000000000000000000000000000000000000000000000000050000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGATC............................................................................................................................................................................25112.00120000000000000000000000000000000000000000000000012141011000100000000000000000000
....................................................................................................................................................................AAGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................2116.0060004000000000000000000000000000000000000000000000000000000010000000000000000001
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGAAA............................................................................................................................................................................2516.0060004000000000000000000000000000000000000000000000000000000110000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GG..................................................................................................................................................................................1915.0050001000000000000000000000000000000000000000000001002000000100000000000000000000
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGAT.............................................................................................................................................................................2315.0050002000000000000000000000000000000000000000000000000100000000000000000000001100
...................................................................................................................................................................TAAGTAGTTAATACAA-GGG.................................................................................................................................................................................1914.0040001000000000000000000000000000000000000000000000110010000000000000000000000000
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGC..............................................................................................................................................................................2214.0040002000000000000000000000000000000000000000000000000000000020000000000000000000
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGT..............................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000010001100000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCT...............................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000100000001000100000000000000000000
................................................................................................................................................................................................................CATTGTGTGACCTACTTAAAT...................................................................................................................................2113.0030001000000000000000000000000000000000000000000000001000000010000000000000000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTT.......................................................................................................................................1812.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAAC...................................................................................................................................2212.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GTTTTTT--C-TTG---CATCGCATTGTGTGACCTACTTAAAT...................................................................................................................................3712.0020000000000000000000000000000000000000000000000000000011000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGTT.............................................................................................................................................................................2412.0020001000000000000000000000000000000000000000000000000000000010000000000000000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAA.....................................................................................................................................2012.0020000000000000000000000000000000000000000000000000010000000010000000000000000000
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGAG.............................................................................................................................................................................2312.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCA...............................................................................................................................................................................2212.0020001000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGATA............................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000001010000000000000000000000000
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGC................................................................................................................................................................................2012.0020001000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCC...............................................................................................................................................................................2212.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAATA..................................................................................................................................2312.0020000000000000000000000000000000000000000000001000010000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGAAAC...........................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000010000000000000000100
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGAGT............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGAC.............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................G---CATCGCATTGTGTGACCTACTTAA.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................GTTTTTT--C-TTG---CATC.........................................................................................................................................................1511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................AGTAGTTAATACAA-GGGCGA..............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
..............................................................................................................................................................................................................CGCATTGTGTGACCTACTTAA.....................................................................................................................................2111.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGAAC............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................GCATTGTGTGACCTACTTAAATTT.................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................TCGCATTGTGTGACCTACTTAA.....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
..............................................................................................................................................................................................................CGCATTGTGTGACCTACTTA......................................................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................AAGTAGTTAATACAA-GGGCGAGT............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGA.................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
..................................................................................................................................................................TTAAGTAGTTAATACAA-GGGCGTC.............................................................................................................................................................................2411.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTAGTTAATACAA-GGGCGTT.............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................................................................................TTTTTT--C-TTG---CATCGCATTGTGTGACCT...........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000010000000000000000000000000000

Generated: 10/20/2015 at 10:18 PM