ID:

der_1390

 Coordinate:

scaffold_4929:21693282-21693432 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

0.0 0.0 0.2

Flybase annnotation

exon [dere_GLEANR_7975:1]; CDS [Dere\GG23144-cds]; intron [Dere\GG23144-in]

No Repeatable elements found

mature
  1. scaffold_1369:4031-4057 -
  2. der_1390  scaffold_4929:21693329-21693355 -
  3. scaffold_4929:21698299-21698325 -
  4. scaffold_4929:21702969-21702995 -
  5. scaffold_4938:1581-1607 -
star
  1. scaffold_1369:4067-4095 -
  2. der_1390  scaffold_4929:21693365-21693393 -
  3. scaffold_4929:21698335-21698363 -
  4. scaffold_4929:21703005-21703033 -
  5. scaffold_4938:1617-1645 -

Sense Strand Reads

----------------------############################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATACTTCTATGTCCCATTAGTTATGGACATCAATGAATATAAATTATACAGTAAGTTTCCTTCTTGTCAGTAATAACTAAAGCAAGTTTTAATAGTCTTCCCGATCGAAACATACAGCTCTTATTTTTATTATCAACTTCGTCATACATTTGTATGAATACAATATTGGACAAAGTGTGTTGTGCAGCAGCCACGCAATGCTAGCGTTTCACCAAAGACATTAGAATAACAAGATGCGTAATGCCATACAA
*****************************************************************************************.............((.((((............................))))))...........************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 GSM1528801
follicle cells		 V108
head
 V107
male body		 V040
embryo
 V060
head
...............................................................................................................................TATTATCAACTTCGTCATACATTTGTA................................................................................................. 27 0 5 7.00 35 35 0 0 0 0 0
...............................................................................................................................TATTATCAACTTCGTCATACATTTG................................................................................................... 25 0 5 3.60 18 18 0 0 0 0 0
................................................................................................................................................................................................................TCACCAAAGACATTAGAATAACAAGA................. 26 0 4 2.75 11 11 0 0 0 0 0
...............................................................................................................................................................................................................TTCACCAAAGACATTAGAATAACAAGA................. 27 0 4 1.50 6 6 0 0 0 0 0
.............................................................................................................................................................................................................................TAGAATAACAAGATGCGTAATGCCA..... 25 0 4 1.50 6 6 0 0 0 0 0
..........................................................................................................................................................TGAATACAATATTGGACAAAGTGTGT....................................................................... 26 0 4 1.25 5 5 0 0 0 0 0
......................................................................................................................TCTTATTTTTATTATCAACTTCGTCA........................................................................................................... 26 0 5 1.00 5 0 5 0 0 0 0
.........................................................................................TAATAGTCTTCCCGATCGAAACATACAGC..................................................................................................................................... 29 0 5 1.00 5 5 0 0 0 0 0
............................................................................................TAGTCTTCCCGATCGAAACATACAGC..................................................................................................................................... 26 0 5 0.80 4 4 0 0 0 0 0
.................................................................................................................................TTATCAACTTCGTCATACATTTGTA................................................................................................. 25 0 5 0.80 4 4 0 0 0 0 0
................................................................................................................................ATTATCAACTTCGTCATACATTTGTA................................................................................................. 26 0 5 0.80 4 4 0 0 0 0 0
..................................................................................................................................................................ATATTGGACAAAGTGTGTTGTGC.................................................................. 23 0 4 0.75 3 0 0 1 1 0 1
..................................................................................................................................TATCAACTTCGTCATACATTTGTA................................................................................................. 24 0 5 0.60 3 3 0 0 0 0 0
..........................................................................................................................................................TGAATACAATATTGGACAAAGTGTG........................................................................ 25 0 4 0.50 2 2 0 0 0 0 0
......................................................................................TTTTAATAGTCTTCCCGATCGAAACA........................................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0 0
...............................................................................................................................TATTATCAACTTCGTCATACATTTGT.................................................................................................. 26 0 5 0.40 2 2 0 0 0 0 0
............................................................TTCTTGTCAGTAATAACTAAAGCAAG..................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0 0
...............................................................................................TCTTCCCGATCGAAACATACAGCTCT.................................................................................................................................. 26 0 5 0.40 2 2 0 0 0 0 0
.................................................................................................................................................................................................................CACCAAAGACATTAGAATAACAAGA................. 25 0 5 0.40 2 2 0 0 0 0 0
..........................................................................................AATAGTCTTCCCGATCGAAACATACAGC..................................................................................................................................... 28 0 5 0.40 2 2 0 0 0 0 0
...............................................................................................................................TATTATCAACTTCGTCATACATT..................................................................................................... 23 0 5 0.40 2 2 0 0 0 0 0
.........................................................................................TAATAGTCTTCCCGATCGAAACATA......................................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0 0
.TACTTCTATGTCCCATTAGTTATGGACA.............................................................................................................................................................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................................TTGGACAAAGTGTGTTGTGCAGCAGC............................................................ 26 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TTCACCAAAGACATTAGCATAACAAGA................. 27 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................TGGACAAAGTGTGTTGTGCAGCAGCCA.......................................................... 27 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................TAGAATAACAAGATGCGTAATGCCATA... 27 0 4 0.25 1 1 0 0 0 0 0
................................................................................................................................................................................................................TCACCAAAGACATTAGAATAACAAG.................. 25 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TTCACCAAAGACATTAGAATAACAAGATG............... 29 0 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................TAAATACAATATTGGACAAAGTGTGT....................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
........................................................................................................................................................TATGAATACAATATTGGACAAAGTG.......................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
.....................................................................................................................................................................TTGGACAAAGTGTGTTGTGCAGCAGCCA.......................................................... 28 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................TACAATATTGGACAAAGTGTGTTGT.................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................TGTATGAATACAATATTGGACAAAGTGT......................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
........................................................................................................................................................TATGAATACAATATTGGACAAAGTGT......................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................TGAATACAATATTGGACAAGGTGTGT....................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................................................TGCTAGCGTTTCACCAAAGACAT.............................. 23 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................TATTTTTATTATCAACTTCGTCATA......................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................TTATTATCAACTTCGTCATACACTTGTA................................................................................................. 28 1 5 0.20 1 1 0 0 0 0 0
....................................................................................................................................................................................................AATGCTAGCGTTTCACCAAAGACAT.............................. 25 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................TATTTTTATTATCAACTTCGTCATACATT..................................................................................................... 29 0 5 0.20 1 1 0 0 0 0 0
............................................................................................................................TTTTATTATCAACTTCGTCATACAT...................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................TGTTGTGCAGCAGCCACGCAATGCTAG............................................... 27 0 5 0.20 1 1 0 0 0 0 0
......................................ATAAATTATACAGTAAGTTTCCTTC............................................................................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................TTCCCGATCGAAACATACAGCTCTTA................................................................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................................................................................................................AATGCTAGCGTTTCACCAAAGACA............................... 24 0 5 0.20 1 1 0 0 0 0 0
............................................................TTCTTGTCAGTAATAACTAAAG......................................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
..........................................................................AACTAAAGCAAGGTTTAATAGTCT......................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0 0
................TTAGTTATGGACATCAATGAATATAAA................................................................................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CACCAAAGACATTAGAATAACAAGAT................ 26 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................................................................................................TGTGCAGCAGCCACGCAATGCTAGCGT............................................ 27 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................CCCGATCGAAACATACAGCTCTTA................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0 0
......................................................................................................................................................................................TGCAGCAGCCACGCAATGCTAGCGTT........................................... 26 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................TCCCGATCGAAACATACAGCTCTTA................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0
........................................................................................................TCGAAACATACAGCTCTTATTTT............................................................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................AGAATAACAAGATGCGTAATGC....... 22 0 5 0.20 1 0 0 0 0 1 0
.........................................................................................................................................................................................AGCAGCCACGCAATGCTAGCGTTTCACC...................................... 28 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................TCCCGATCGAAACATACAGCTCT.................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................TAGAATAACAAGATGCGTAATGC....... 23 0 5 0.20 1 1 0 0 0 0 0
..........................................................................................AATAGTCTTCCCGATCGAAACA........................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
............................................................................................TAGTCTTCCCGATCGAAACATACAG...................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
...................................................TAAGTTTCCTTCTTGTCAGTAATAACT............................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................................................................................CTCACCAAAGACATTAGAATAACAAGA................. 27 1 5 0.20 1 1 0 0 0 0 0
.......TATGTCCCATTAGTTATGGACATCAATG........................................................................................................................................................................................................................ 28 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................TATCAACTTCGTCATACATTTG................................................................................................... 22 0 5 0.20 1 0 0 0 0 1 0
.............................................................................................................................................................................................................................TAGAATAACAAGATGCGTAATGCC...... 24 0 5 0.20 1 1 0 0 0 0 0
.............................TCAATGAATATAAATTATACAGTAAGTT.................................................................................................................................................................................................. 28 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................ATCAACTTCGTCATACATTTTTA................................................................................................. 23 1 5 0.20 1 1 0 0 0 0 0
......................................................................................................................TCTTATTTTAATTATCAACTTCGTCA........................................................................................................... 26 1 5 0.20 1 0 1 0 0 0 0
.........................................................TCCTTCTTGTCAGTAATAACTAAAGCA....................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GCTAGCGTTTCACCAAAGACA............................... 21 0 5 0.20 1 0 0 1 0 0 0
...............................................................................................................ATACAGCTCTTATTTTTATT........................................................................................................................ 20 0 5 0.20 1 0 0 0 1 0 0
........................................................................................................TCGAAACATACAGTTCTTATT.............................................................................................................................. 21 1 5 0.20 1 0 0 1 0 0 0
.............................TCAATGAATATAAATTATACAGTAAGT................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
...........................................................................................ATAGTCTTCCCGATCGAAACATACAGC..................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................TGTTGTGCAGCAGCCACGCAATGCT................................................. 25 0 5 0.20 1 1 0 0 0 0 0
............................................................................................................................................................................................AGCCACGCAATGCTAGCGTTTCACCAA.................................... 27 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................TATTATCAACTTCGTCATACAT...................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................TTTATTATCAACTTCGTCATACATTTG................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
......................................................................................TTTTAATAGTCTTCCCAATCGAAACA........................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0
................................................................................................................................ATTATCAACTTCGTCATACATTTG................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................................................................................TCACCAAAGACATTAGAAA........................ 19 1 6 0.17 1 1 0 0 0 0 0
................................................................................................................................................................................................................GCACCAAAGACATTAGAATAACAAGA................. 26 1 6 0.17 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................TAGAATAACAAGATGCGTAATG........ 22 0 8 0.13 1 1 0 0 0 0 0
........................................................................................................................................................................................................................GAGATTAGAATAACAAGATGCG............. 22 1 13 0.08 1 0 0 1 0 0 0

Anti-sense strand reads

TATGAAGATACAGGGTAATCAATACCTGTAGTTACTTATATTTAATATGTCATTCAAAGGAAGAACAGTCATTATTGATTTCGTTCAAAATTATCAGAAGGGCTAGCTTTGTATGTCGAGAATAAAAATAATAGTTGAAGCAGTATGTAAACATACTTATGTTATAACCTGTTTCACACAACACGTCGTCGGTGCGTTACGATCGCAAAGTGGTTTCTGTAATCTTATTGTTCTACGCATTACGGTATGTT
*************************************************************************************************.............((.((((............................))))))...........***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 GSM1528801
follicle cells		 M057
embryo
 V060
head
 V107
male body		 V108
head
...........................................................GAAGAACAGTCATTATTGATTTCG........................................................................................................................................................................ 24 0 5 0.80 4 1 3 0 0 0 0
..................................................................................................................................................................................................CGTTACGATCGCAAAGTGGTTTCT................................. 24 0 5 0.60 3 3 0 0 0 0 0
...................................................................................................................................................................................................................TGTTTCTGTAATCTTATTGTTCTAC............... 25 1 13 0.54 7 0 7 0 0 0 0
..................................................................................................................................................................................................................TGGTTTATGTTATCTTATTGTTCTAC............... 26 2 17 0.41 7 0 7 0 0 0 0
..................................................................................................................................................................................................CGTTACGATCGCAAAGTGGTTTC.................................. 23 0 5 0.40 2 2 0 0 0 0 0
...................................................................................................................................................................................................GTTACGATCGCAAAGTGGTTTC.................................. 22 0 5 0.40 2 2 0 0 0 0 0
............................................................................................................................................CAGTATGTAAACATACTTATGTTATAAC................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................................................GCGTTACGATCGCAAAGTGGTTTC.................................. 24 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................................TCGAGAATAAAAATAATAGTTG.................................................................................................................. 22 0 5 0.20 1 0 0 1 0 0 0
...................................................................................................................................................................................................GTTACGATCGCAAAGTGGTTTCTGT............................... 25 0 5 0.20 1 1 0 0 0 0 0
.............GGTAATCAATACCTGTAGTTACTTAT.................................................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
.....................................................................................................................................................................................................TACGATCGCAAAGTGGTTTCT................................. 21 0 5 0.20 1 0 0 0 0 1 0
................................................................................................................ATGTCGAGAATAAAAATAATAGTTG.................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................GGGATAGCTTTGTATGTCGAGAA................................................................................................................................. 23 1 5 0.20 1 0 0 0 0 0 1
..................................................................................................................GTCGAGAATAAAAATAATAGTTG.................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0 0
...........................................................GAAGAACAGTCATGATTGATTTCG........................................................................................................................................................................ 24 1 5 0.20 1 0 1 0 0 0 0
....................................................................................................................CGAGAATAAAAATAATTGTTGAAGCAGT........................................................................................................... 28 1 5 0.20 1 1 0 0 0 0 0
..............................................ATGTCATTCAAAGGAAGCACAGTC..................................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0 0
..............................................ATGTCATTCAAAGGAAGAACAGTC..................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0
............GGGTAATCAATACCTGTAGTTACTT...................................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................AATAGTTGAAGCAGTATGTAAACAT................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................................CGGTGCGTTACGATCGCAAAGTGGTTT................................... 27 0 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................................................................TGCGTTACGATCGCAAAGTGGCTTCTG................................ 27 1 5 0.20 1 1 0 0 0 0 0
..............TTAATCAATACCTGTAGTTACTTAT.................................................................................................................................................................................................................... 25 1 5 0.20 1 1 0 0 0 0 0
...........................GTAGTTACTTATATTTAATATGTCATT..................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................................GCGTTACGATCGCAAAGCGGTTTC.................................. 24 1 5 0.20 1 1 0 0 0 0 0
.........ACAGGGTAATCAATACCTGTAGTTACTT...................................................................................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CGATCGCAAAGTGGTTTCTGTA.............................. 22 0 5 0.20 1 0 0 0 1 0 0
.....................................................................................................................................................................................CACGTCGTCGGTGCGTTACGATCGCAA........................................... 27 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................................................GTGGTTTCTGTGATCTTATTGTTCTAC............... 27 1 20 0.15 3 0 3 0 0 0 0
..................................................................................................................................................................................................................CGGTTTCTGTAATCTTATTGTTCTAC............... 26 1 14 0.14 2 0 2 0 0 0 0
..................................................................................................................................................................................................................TGGTTTCTGTTATCTTATTGTTCTAC............... 26 1 16 0.13 2 0 2 0 0 0 0
..................................................................................................................................................................................................................TGGTTTCGGTTATCTTATTGTTCTAC............... 26 2 18 0.11 2 0 2 0 0 0 0
...................................................................................................................................................................................................................GGTTTCTGTAATCTTATTGTTCTAC............... 25 0 10 0.10 1 1 0 0 0 0 0
..................................................................................................................................................................................................................TGGTTTCTGTAATCTTATTGTTCT................. 24 0 10 0.10 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TGGTTTCTGTCATCTTATTGTTCTAC............... 26 1 16 0.06 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TGGTTTATGTTAGCTTATTGTTCTAC............... 26 3 19 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................................GGTTTCTGTTATCTTATTGTTCTAC............... 25 1 19 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................................GTGGTTTCTGTGAGCTTATTGTTCTAC............... 27 2 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TGGTTTCTGTTATCTTATTGTTTTAC............... 26 2 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TGGTTTCGGTTAGCTTATTGTTCTAC............... 26 3 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4929:21693232-21693482 - der_1390 ATACTTCTATG-TCCCATT-------------------------------------AGTTATGGACATCAATGA--------------ATATAAATTAT---------ACA----GTAAG-----TTTCC--TTCTTG--TCAGTAATAAC-------TAAAGCAAGTTTTAATAGTCTTCCCGATCGAAAC--------------------------------ATACAGCTCTTATTTTTATTATCAACTTCGT------------------------------------CATACATTT-------------GTATGAATACAATATTGGACAAAGTG---------------------------------------------------------------T---------GTTGTGCAGCAGCCACGCAA--------------------TGCTAGCGTTTCACCAAAGAC-ATTA-GAATAACAAGATGCGTAATG-CCATACAA---------------
droYak3 v2_chrUn_6987:5424-5650 + GTACATCTATGC-----------------A--------------------TTTGCGTGA-----ACATTAAT------------------TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAATTGTATTACATTTTTTGAATTTTTGTTT-------------------------------------------------------------------------------------------------------------------GTGGGCATATTTATCCTAAATGGGAT----------CCACTTAAATATTTCGGACATTTTATTTGT--------------------CATAAAATTCAAATTTTGTGCATTTTCAGCTTTGGTTTTACCAAAGAC-ATTA-GAATAACAAGATGCGTAACG-CCATACGA---------------
droSec2 scaffold_136:84967-85205 + ATGATTCTTCT-GCCTGTTATATGTATACGAATGTAGTATAACCTTTTACTCTGCGAATTAAAGGTATAATTATG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAATGGT-TTTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTTTA-CCAATATAGTGTTTACAACTGCCTACGTGTTCTTTTTATACACGTTACTCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAAGAC-ACTA-GAATAACAAGATGCGTAACGGCTATAC-----------------
droSim2 2l:20880765-20881003 + ATGATTCTTCT-GCCTGTTATATGTATACGAATCTAGTATAACCTTTTACTCTGCGAATTAAAGGTATAATTATG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAATGGT-TTTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTTTA-CCAATATAGTGTTTACAACTGCCTACGTGTTCTTTTTATACACGTTACTCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAAGAC-ACTA-GAATAACAAGATGTGTAACGGCTATAC-----------------
dm3 chr2R:1032318-1032465 + TTCTAT----G-GCCGATT-------------------------------------AGCTATGGACATCAATGA--------------ATATAATTTAT---------ACA----GTAAG-----TTTCC--TTCTCG--TCAGTGACAAG-------CAAAGCAAGTTGAAAAAGTCTT-------------------------------------------------GCCCTAATATCTATTATCAAATTCAT------------------------------------CATA----T-------------GTATGAA------------------------------------------------------------------------------TATGTGTAAAATGTG--------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409672:7086052-7086113 - ATACTTT---------------------------------------TTACTCTACGAGTAACGGGTATAAAAAGA--------------A--AGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCCAAAATT-CCTTTTTG---------------
droBia1 scf7180000297098:4094-4198 - ATACTTTCCGAC-----------------GAATCTAGTATACCCTTTCACTCTACGAGTTACGGGTATAAAAAT---------------TATATAATAT---------ACA----GGA-------TTTTA--TTCTTC--GAATCAAAAGC-------AAAAACATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415454:33109-33297 - AGTTAT---AAC-----------------CAAAATAAGATTTTCTTCGTCTTCCCAAAATGAAAATTTAATTCTG------------T----------------------------------TTG-----CCAGTT--TGTCAGTT--TG------TCCAAAACATGTT---------------------------------------------------------------------------------------------------------------------------------TT-------------TTATGTTTTGAAAATTTGATATGACG---------------------------------------------------------------T---------TCATCACATCGA-TATAAAA--------------------AACTTTTGTTCTACCAAAGAC-ATTA-GAATATGAAGATGGATAACG-CCATACGA---------------
droEle1 scf7180000491238:896184-896377 + ATACATTTCAAC-----------------GAATACAATATACCCTTTTACTCTACTAGTAACAAGTATAAAAATTAAGGACTTAGGGTCCGTAAGCTTTTAACTTATAGCCTCATATAAAAAGGGTTTGTT-------C------AAAAGTCAAAATATGAT---------------------------------------------------------------------------TTTTTTTTGAATTTTTTT------------------------------------TATATATTTGTATTATATAAATAT------AAAATGTTGAATAGAGTG------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------------------------
droRho1 scf7180000761616:677-872 - ATACTTTTGCAC-----------------GAATACAATATACCCTTTTACTCTACGAGTAACGGGTATAAAAAC----------------------TC--------------------------------------------------------------------------ATATTCTGTCCCACTTTAAC--------------------------------AGAAAGCTCTCTTCTTTTGGATCTTCTTCGTATTAAGCCTGTTTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCAGGGCCCGATCAAAGACCAATATAAACACCAAGATGCGTAACG-CCATACGATTTTTTTGCACACGA
droKik1 scf7180000298251:731-805 - GAAAACAACATT-----------------GG------------------ATTGCTGCGAAGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTACCAAAGAC-AATA-GAGCTATAAGATAAGTAACG-CCATACGA---------------
droBip1 scf7180000394979:11010-11013 + ATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000013149:1076-1226 + ATACATTTTGGC-----------------GACTTTAATA------------------CCTATGGGTGTATAGT-----------------ATAATTAAT---------GCTTTGAGCAATTTTAG-----CTTGTT--TTTCAGTAACAG------TGCAAATCATGTTTGAA---------------------------------------------------------------------------TTCTTT-----------------------G-------------------------------------------------------------ATAGGCA------------------------------------TTTTTTCTTTAT--ATTTTCAA-------------------------AA----------------------------------------------------------------------------ATATTTTTGTTTGAGT
droVir3 scaffold_12815:17517-17684 + ACAAGTACAATT-----------------TACACTAATACCCATTT----TTAATGGGTTCAGGGTATACA----------------------AATTTC---------GAA----GTAGA-----TTTATT--CCGTAG-TTGATAGTAAT-------TACCACAAAATTTAACT-------------------------------------------------AAA---------------------CT--------------GTT-TTTAGTTTGGACCGGAATATTTATATATATTTAAACTATATATATATATGAAT-----------------A------------------------------------------------------------------------TA--------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6482:499614-499621 - ATACTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:8241880-8241882 - ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
ATACTTCTATG-TCCCATT-------------------------------------AGTTATGGACATCAATGA--------------ATATAAATTAT---------ACA----GTAAG-----TTTCC--TTCTTG--TCAGTAATAAC-------TAAAGCAAGTTTTAATAGTCTTCCCGATCGAAAC--------------------------------ATACAGCTCTTATTTTTATTATCAACTTCGT------------------------------------CATACATTT-------------GTATGAATACAATATTGGACAAAGTG---------------------------------------------------------------T---------GTTGTGCAGCAGCCACGCAA--------------------TGCTAGCGTTTCACCAAAGAC-ATTA-GAATAACAAGATGCGTAATG-CCATACAA---------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................TATTATCAACTTCGT------------------------------------CATACATTT-------------GTA...............................................................................................................................................................................................................2757.003535000000
................................................................................................................................................................................................................................................TATTATCAACTTCGT------------------------------------CATACATTT-------------G.................................................................................................................................................................................................................2553.601818000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAAAGAC-ATTA-GAATAACAAGA.................................2642.751111000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACCAAAGAC-ATTA-GAATAACAAGA.................................2741.5066000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAATG-CCA....................2541.5066000000
............................................................................................................................................................................................................................................................................................................................TGAATACAATATTGGACAAAGTG---------------------------------------------------------------T---------GT.............................................................................................................2641.2555000000
.......................................................................................................................................................................................................................................TCTTATTTTTATTATCAACTTCGT------------------------------------CA......................................................................................................................................................................................................................................2651.0050000005
..........................................................................................................................................................................TAATAGTCTTCCCGATCGAAAC--------------------------------ATACAGC....................................................................................................................................................................................................................................................................................................2951.0055000000
.............................................................................................................................................................................TAGTCTTCCCGATCGAAAC--------------------------------ATACAGC....................................................................................................................................................................................................................................................................................................2650.8044000000
..................................................................................................................................................................................................................................................TTATCAACTTCGT------------------------------------CATACATTT-------------GTA...............................................................................................................................................................................................................2550.8044000000
.................................................................................................................................................................................................................................................ATTATCAACTTCGT------------------------------------CATACATTT-------------GTA...............................................................................................................................................................................................................2650.8044000000
....................................................................................................................................................................................................................................................................................................................................ATATTGGACAAAGTG---------------------------------------------------------------T---------GTTGTGC........................................................................................................2340.7530010110
...................................................................................................................................................................................................................................................TATCAACTTCGT------------------------------------CATACATTT-------------GTA...............................................................................................................................................................................................................2450.6033000000
............................................................................................................................................................................................................................................................................................................................TGAATACAATATTGGACAAAGTG---------------------------------------------------------------T---------G..............................................................................................................2540.5022000000
.......................................................................................................................................................................TTTTAATAGTCTTCCCGATCGAAAC--------------------------------A..........................................................................................................................................................................................................................................................................................................2650.4022000000
................................................................................................................................................................................................................................................TATTATCAACTTCGT------------------------------------CATACATTT-------------GT................................................................................................................................................................................................................2650.4022000000
....................................................................................................................................TTCTTG--TCAGTAATAAC-------TAAAGCAAG....................................................................................................................................................................................................................................................................................................................................................................2650.4022000000
................................................................................................................................................................................TCTTCCCGATCGAAAC--------------------------------ATACAGCTCT.................................................................................................................................................................................................................................................................................................2650.4022000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAAGAC-ATTA-GAATAACAAGA.................................2550.4022000000
...........................................................................................................................................................................AATAGTCTTCCCGATCGAAAC--------------------------------ATACAGC....................................................................................................................................................................................................................................................................................................2850.4022000000
................................................................................................................................................................................................................................................TATTATCAACTTCGT------------------------------------CATACATT................................................................................................................................................................................................................................2350.4022000000
..........................................................................................................................................................................TAATAGTCTTCCCGATCGAAAC--------------------------------ATA........................................................................................................................................................................................................................................................................................................2550.4022000000
.TACTTCTATG-TCCCATT-------------------------------------AGTTATGGACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3311000000
.......................................................................................................................................................................................................................................................................................................................................TTGGACAAAGTG---------------------------------------------------------------T---------GTTGTGCAGCAGC..................................................................................................2640.2511000000
........................................................................................................................................................................................................................................................................................................................................TGGACAAAGTG---------------------------------------------------------------T---------GTTGTGCAGCAGCCA................................................................................................2740.2511000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAATG-CCATA..................2740.2511000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAAAGAC-ATTA-GAATAACAAG..................................2540.2511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACCAAAGAC-ATTA-GAATAACAAGATG...............................2940.2511000000
..........................................................................................................................................................................................................................................................................................................................TATGAATACAATATTGGACAAAGTG---------------------------------------------------------------.........................................................................................................................2540.2511000000
.......................................................................................................................................................................................................................................................................................................................................TTGGACAAAGTG---------------------------------------------------------------T---------GTTGTGCAGCAGCCA................................................................................................2840.2511000000
................................................................................................................................................................................................................................................................................................................................TACAATATTGGACAAAGTG---------------------------------------------------------------T---------GTTGT..........................................................................................................2540.2511000000
...........................................................................................................................................................................................................................................................................................................T-------------GTATGAATACAATATTGGACAAAGTG---------------------------------------------------------------T---------...............................................................................................................2840.2511000000
..........................................................................................................................................................................................................................................................................................................................TATGAATACAATATTGGACAAAGTG---------------------------------------------------------------T---------...............................................................................................................2640.2511000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGCGTTTCACCAAAGAC-AT...............................................2350.2011000000
..........................................................................................................................................................................................................................................TATTTTTATTATCAACTTCGT------------------------------------CATA....................................................................................................................................................................................................................................2550.2011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------TGCTAGCGTTTCACCAAAGAC-AT...............................................2550.2011000000
..........................................................................................................................................................................................................................................TATTTTTATTATCAACTTCGT------------------------------------CATACATT................................................................................................................................................................................................................................2950.2011000000
.............................................................................................................................................................................................................................................TTTTATTATCAACTTCGT------------------------------------CATACAT.................................................................................................................................................................................................................................2550.2011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T---------GTTGTGCAGCAGCCACGCAA--------------------TGCTAG.................................................................2750.2011000000
..........................................................................................ATAAATTAT---------ACA----GTAAG-----TTTCC--TTC....................................................................................................................................................................................................................................................................................................................................................................................................2550.2011000000
..................................................................................................................................................................................TTCCCGATCGAAAC--------------------------------ATACAGCTCTTA...............................................................................................................................................................................................................................................................................................2650.2011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------TGCTAGCGTTTCACCAAAGAC-A................................................2450.2011000000
....................................................................................................................................TTCTTG--TCAGTAATAAC-------TAAAG........................................................................................................................................................................................................................................................................................................................................................................2250.2011000000
.................TT-------------------------------------AGTTATGGACATCAATGA--------------ATATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAAGAC-ATTA-GAATAACAAGAT................................2650.2011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCAGCCACGCAA--------------------TGCTAGCGT..............................................................2750.2011000000
....................................................................................................................................................................................CCCGATCGAAAC--------------------------------ATACAGCTCTTA...............................................................................................................................................................................................................................................................................................2450.2011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCCACGCAA--------------------TGCTAGCGTT.............................................................2650.2011000000
...................................................................................................................................................................................TCCCGATCGAAAC--------------------------------ATACAGCTCTTA...............................................................................................................................................................................................................................................................................................2550.2011000000
.........................................................................................................................................................................................TCGAAAC--------------------------------ATACAGCTCTTATTTT...........................................................................................................................................................................................................................................................................................2350.2011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GAATAACAAGATGCGTAATG-C......................2250.2010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCACGCAA--------------------TGCTAGCGTTTCACC........................................................2850.2011000000
...................................................................................................................................................................................TCCCGATCGAAAC--------------------------------ATACAGCTCT.................................................................................................................................................................................................................................................................................................2350.2011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAATG-C......................2350.2011000000
...........................................................................................................................................................................AATAGTCTTCCCGATCGAAAC--------------------------------A..........................................................................................................................................................................................................................................................................................................2250.2011000000
.............................................................................................................................................................................TAGTCTTCCCGATCGAAAC--------------------------------ATACAG.....................................................................................................................................................................................................................................................................................................2550.2011000000
....................................................................................................................TAAG-----TTTCC--TTCTTG--TCAGTAATAAC-------T............................................................................................................................................................................................................................................................................................................................................................................2750.2011000000
.......TATG-TCCCATT-------------------------------------AGTTATGGACATCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.2011000000
...................................................................................................................................................................................................................................................TATCAACTTCGT------------------------------------CATACATTT-------------G.................................................................................................................................................................................................................2250.2010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAATG-CC.....................2450.2011000000
...................................................................TCAATGA--------------ATATAAATTAT---------ACA----GTAAG-----TT............................................................................................................................................................................................................................................................................................................................................................................................................2850.2011000000
...............................................................................................................................TCC--TTCTTG--TCAGTAATAAC-------TAAAGCA......................................................................................................................................................................................................................................................................................................................................................................2750.2011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGCGTTTCACCAAAGAC-A................................................2150.2010000010
................................................................................................................................................................................................................................ATACAGCTCTTATTTTTATT.......................................................................................................................................................................................................................................................................................2050.2010000100
...................................................................TCAATGA--------------ATATAAATTAT---------ACA----GTAAG-----T.............................................................................................................................................................................................................................................................................................................................................................................................................2750.2011000000
............................................................................................................................................................................ATAGTCTTCCCGATCGAAAC--------------------------------ATACAGC....................................................................................................................................................................................................................................................................................................2750.2011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T---------GTTGTGCAGCAGCCACGCAA--------------------TGCT...................................................................2550.2011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACGCAA--------------------TGCTAGCGTTTCACCAA......................................................2750.2011000000
................................................................................................................................................................................................................................................TATTATCAACTTCGT------------------------------------CATACAT.................................................................................................................................................................................................................................2250.2011000000
..............................................................................................................................................................................................................................................TTTATTATCAACTTCGT------------------------------------CATACATTT-------------G.................................................................................................................................................................................................................2750.2011000000
.................................................................................................................................................................................................................................................ATTATCAACTTCGT------------------------------------CATACATTT-------------G.................................................................................................................................................................................................................2450.2011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAAAGAC-ATTA-GAAA........................................1960.1711000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAATG-.......................2280.1311000000
droYak3
GTACATCTATGC-----------------A--------------------TTTGCGTGA-----ACATTAAT------------------TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAATTGTATTACATTTTTTGAATTTTTGTTT-------------------------------------------------------------------------------------------------------------------GTGGGCATATTTATCCTAAATGGGAT----------CCACTTAAATATTTCGGACATTTTATTTGT--------------------CATAAAATTCAAATTTTGTGCATTTTCAGCTTTGGTTTTACCAAAGAC-ATTA-GAATAACAAGATGCGTAACG-CCATACGA---------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----A..........................................................................................................................................................................................................................................................................................................................................25151.1317015100010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAATTTTGTGCATTTTCAGCTTTGG...............................................................2711.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-CC.....................24200.7515014000100000
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAA.......................................................................................................................................................................................................................................................................................................................................28150.7311010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-CCA....................25200.7014000100130000
.TACATCTATGC-----------------A--------------------TTTGCGTGA-----ACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.7014013000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GAATAACAAGATGCGTAACG-CCA....................24200.7014013100000000
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AA.........................................................................................................................................................................................................................................................................................................................................26150.60908100000000
.......................................................................T------------------TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCC...................................................................................................................................................................................................................................................................................................................................................26200.45914400000000
.......................................................................T------------------TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCT..................................................................................................................................................................................................................................................................................................................................................27200.30602400000000
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAA........................................................................................................................................................................................................................................................................................................................................27150.27402200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-CCAT...................26200.25500320000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-.......................22200.20401000030000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAGATGCGTAACG-CCATACG................24200.20404000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-CCATA..................27200.15300300000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-GAATAACAAGATGCGTAACG-CC.....................25200.10200200000000
.TACATCTATGC-----------------A--------------------TTTGCGTGA-----ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
....................................................................................................................TGAG------------------------------------------------------ATATTTGGCCTTAG----AAAATTGTAT.................................................................................................................................................................................................................................................................................................................................28100.10101000000000
.........................................................................................................................................................................................TAG----AAAATTGTATTACATTTTTTGAAT...................................................................................................................................................................................................................................................................................................................27100.10101000000000
..........................................................................................TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCC...................................................................................................................................................................................................................................................................................................................................................25200.10202000000000
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAAT......................................................................................................................................................................................................................................................................................................................................29140.07100000010000
................................................................................................TAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAAT......................................................................................................................................................................................................................................................................................................................................28140.07101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------CATAAAATTCAAATTTTGTGCATT..........................................................................25140.07101000000000
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----...........................................................................................................................................................................................................................................................................................................................................24150.07101000000000
..................................................................................................T---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAA.......................................................................................................................................................................................................................................................................................................................................25150.07101000000000
.................................................................................................AT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAA.......................................................................................................................................................................................................................................................................................................................................26150.07101000000000
.............................................................................................ATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----A..........................................................................................................................................................................................................................................................................................................................................27150.07100100000000
.................................................................................................AT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----A..........................................................................................................................................................................................................................................................................................................................................23150.07101000000000
...............................................................................................TTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAC.......................................................................................................................................................................................................................................................................................................................................28150.07101000000000
................................................................................................TAT---------A------GTGAG------------------------------------------------------ATATTTGGCCTTAG----AAAA.......................................................................................................................................................................................................................................................................................................................................27150.07101000000000
..........................................................................................TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCT..................................................................................................................................................................................................................................................................................................................................................26200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-CCAC...................26200.05100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GAATAACAAGATGCGTAACG-CCATAC.................27200.05101000000000
.....................................................................AAT------------------TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCC...................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
.TACATCTATGC-----------------A--------------------TTTGCGTGA-----ACATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
.......TATGC-----------------A--------------------TTTGCGTGA-----ACATTAAT------------------TCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-CCATAA.................28200.05101000000000
.......................................................................T------------------TCGATTTAT---------A------GTGAG------------------------------------------------------ATATTTGGCCC..................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGCGTAACG-C......................23200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAAGATGCGTAACG-CCATA..................23200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-GAATAACAAGATGCGTAACG-CCA....................26200.05101000000000
.TACATCTATGC-----------------A--------------------TTTGCGTGA-----AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.........TGC-----------------A--------------------TTTGCGTGA-----ACATTAAT------------------TCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droSec2
ATGATTCTTCT-GCCTGTTATATGTATACGAATGTAGTATAACCTTTTACTCTGCGAATTAAAGGTATAATTATG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAATGGT-TTTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTTTA-CCAATATAGTGTTTACAACTGCCTACGTGTTCTTTTTATACACGTTACTCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAAGAC-ACTA-GAATAACAAGATGCGTAACGGCTATAC-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................TAGTGTTTACAACTGCCTACGTGTTCT.........................................................................................................................................2711.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACGGCTA....................2011.0010100
.TGATTCTTCT-GCCTGTTATATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
..GATTCTTCT-GCCTGTTATATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGAC-ACTA-GAATAACAAGATG...............................25200.0511000
droSim2
ATGATTCTTCT-GCCTGTTATATGTATACGAATCTAGTATAACCTTTTACTCTGCGAATTAAAGGTATAATTATG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAATGGT-TTTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTTTA-CCAATATAGTGTTTACAACTGCCTACGTGTTCTTTTTATACACGTTACTCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAAGAC-ACTA-GAATAACAAGATGTGTAACGGCTATAC-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....TCTTCT-GCCTGTTATATGTATACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.001000000002260000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGGCTAT...................2515.00501010000003000000
.........................................................................TG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAATGGT-T.................................................................................................................................................................................................................................................................................................................................2514.00400000004000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGGC......................2214.00400001001101000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGGCTATA..................2614.00400010000001020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGGCT.....................2313.00300000003000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAGATGTGTAACGGCTATAC-----------------2413.00300000001001010000
....................................................TGCGAATTAAAGGTATAATTATG---------------------------------------------------------------------------------------------------GGGCT........................................................................................................................................................................................................................................................................................................................................................2813.00300000000200010000
...............................................TACTCTGCGAATTAAAGGTATAATTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000000010020000
................................................................................................................................................................................................................TTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTT.............................................................................................................................................................................2712.00200000002000000000
............................................TTTTACTCTGCGAATTAAAGGTATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000000020000
.........................................................................TG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAATGGT-..................................................................................................................................................................................................................................................................................................................................2412.00200000011000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGTGTAACGGCTATAC-----------------2312.00200010000001000000
..........................................................................................................................................................................................................TTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAA...................................................................................................................................................................................2712.00200000011000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GAATAACAAGATGTGTAACGGC......................2412.00200000000101000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGGCTATAC-----------------2712.00200010000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGG.......................2112.00200000000001001000
....................................................................................................................................................................................................TGGT-TTTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................2711.00100000001000000000
.TGATTCTTCT-GCCTGTTATATGTATACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
.....................................TATAACCTTTTACTCTGCGAATTAAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
....TTCTTCT-GCCTGTTATATGTATACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
.......................................................................................................................................................................................................T-TTTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAA....................................................................................................................................................................................2811.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAA.....................................................2611.00100000010000000000
.......TTCT-GCCTGTTATATGTATACGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..........T-GCCTGTTATATGTATACGAATCTAGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAGATGTGTAACGGCTATA..................2311.00100000000001000000
..........................................................................................................................................................................................................TTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GA......................................................................................................................................................................................2411.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACGGCTA....................2411.00100000000000010000
...................................................................................................................................................................................................................TATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTT.............................................................................................................................................................................2411.00100000001000000000
................................TCTAGTATAACCTTTTACTCTGCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGTAT--------------------------------------------TGTGTTGAACCAAAGAC-A................................................2711.00100000001000000000
..................................TAGTATAACCTTTTACTCTGCGAATTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
..................................TAGTATAACCTTTTACTCTGCGAATTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................................................................................................................................TTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACAAGTT.............................................................................................................................................................................2511.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGTAT--------------------------------------------TGTGTTGAACCAAAGAC-A................................................2611.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAAG....................................................2611.00100000000000010000
..........................................................................................................................................................................................................TTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAAACA.................................................................................................................................................................................2911.00100000010000000000
..........................................................................................................................................................................................................TTCATTTTTTATTGGCGGCGTT-------------------------------------------------------------------------------------------------------------------GAAA....................................................................................................................................................................................2611.00100000000000010000
..........................................................................................................................................................................................TG----AAAATGGT-TTTCATTTTTTATTGGC.................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
..........................TACGAATCTAGTATAACCTTTTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
................................................ACTCTGCGAATTAAAGGTATAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAGATGTGTAACGGC......................1911.00100000100000000000
.......................................................................TATG---------------------------------------------------------------------------------------------------GGGCTTGCCGCTTG----AAAAT......................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTATACACGTTACTCGTAGAGTA................................................................................................................2811.00100000000100000000
....TTCTTCT-GCCTGTTATATGTATACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.....TCTTCT-GCCTGTTATATGTATACGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGTAGAGTAT--------------------------------------------TGTGTTGAACCAAAGA...................................................2711.00100000000010000000
.TGATTCTTCT-GCCTGTTATATGTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAAC.........................1930.67200002000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAA..........................1830.67200002000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGTAACG........................2020.50100001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGTGTAACG........................1620.50100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTGT............................1630.33100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TATACACGTTACTCGTAGAGT.................................................................................................................2130.33100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTATACACGTTACTCGTAGAGTA................................................................................................................2330.33100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AT--------------------------------------------TGTGTTGAACCAAAGT...................................................1830.33100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAACCAAAGAC-ACT..............................................1740.25100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGTGTAAC.........................1540.25100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAACCAAAGAC-ACTA-GAATAACAAGA.................................2880.13100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACACGTTACTCGTAGAGTA................................................................................................................1990.11100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAACCAAAGAC-ACTA-GAA.........................................2090.11100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCAAAGAC-ACTA-GAATAACAAGA.................................2790.11100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCAAAGAC-ACTA-GAATAACAA...................................2590.11100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGTC.............................15190.11200000000002000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGAC-ACTA-GAATAACAAGA.................................24200.10200000020000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAC-ACTA-GAATAACAAG..................................21200.05100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAC-ACTA-GAATAACAAGATG...............................21200.05100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAC-ACTA-GAATAACAAG..................................20200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGAC-ACTA-GAATAACAAG..................................23200.05100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-ACTA-GAATAACAAGAT................................19200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTATACACGTTAG..........................................................................................................................15200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGTAACGGCTCA...................16200.05100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGAC-ACTA-GAAA........................................17200.05100000000100000000
dm3
TTCTAT----G-GCCGATT-------------------------------------AGCTATGGACATCAATGA--------------ATATAATTTAT---------ACA----GTAAG-----TTTCC--TTCTCG--TCAGTGACAAG-------CAAAGCAAGTTGAAAAAGTCTT-------------------------------------------------GCCCTAATATCTATTATCAAATTCAT------------------------------------CATA----T-------------GTATGAA------------------------------------------------------------------------------TATGTGTAAAATGTG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........G-GCCGATT-------------------------------------AGCTATGGACATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................24113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........G-GCCGATT-------------------------------------AGCTATGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000101000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGGACATCAATGA--------------ATATAATTTAT---------...............................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................T-------------------------------------AGCTATGGACATCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000000000000000000000000000000000000000000000
..........G-GCCGATT-------------------------------------AGCTATGGACATCAATGA--------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CAT------------------------------------CATA----T-------------GTATGAA------------------------------------------------------------------------------TATGTGTA.....................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TATGGACATCAATGA--------------ATATAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TATGGACATCAATGA--------------ATATAATTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCCGATT-------------------------------------AGCTATGGACATCAATGA--------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....T----G-GCCGATT-------------------------------------AGCTATGGACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................ATGAA------------------------------------------------------------------------------TATGTGTAAAATGTG--------------------------------------------------------------------------------------------------------------2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................ATT-------------------------------------AGCTATGGACATCAATGA--------------ATATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ATA----T-------------GTATGAA------------------------------------------------------------------------------TATGTGTA.....................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CTATGGACATCAATGA--------------ATATAATTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AT----G-GCCGATT-------------------------------------AGCTATGGACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TAT----G-GCCGATT-------------------------------------AGCTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TT-------------------------------------AGCTATGGACATCAATGA--------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CA----GTAAG-----TTTCC--TTCTCG--TCAGTGACA......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TAAG-----TTTCC--TTCTCG--TCAGTGACAAG-------CA...........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................G-----TTTCC--TTCTCG--TCAGTT.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TATGGACATCAATGA--------------ATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATT-------------------------------------AGCTATGGACATCAATGA--------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TT-------------------------------------AGCTATGGACATCAATGA--------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CTATGGACATCAATGA--------------ATATAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAATGA--------------ATATAATTTAT---------AC.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCCGATT-------------------------------------AGCTATGGACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....AT----G-GCCGATT-------------------------------------AGCTATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GCTATGGACATCAATGA--------------ATATAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TCAGTGACAAG-------CAAAGCAAGTTGAA...............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTCG--TCAGTGACAAG-------CAAAGC.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCCGATT-------------------------------------AGCTATGGACATCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CATCAATGA--------------ATATAATTTAT---------ACA----GTAAG-----..............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCGATT-------------------------------------AGCTATGGACATCAATGA--------------ATA................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCTAT----G-GCCGATT-------------------------------------AGCTATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGATT-------------------------------------AGCTATGGACATCAATGA--------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TCTCG--TCAGTGACAAG-------CAA..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................T-------------GTATGAA------------------------------------------------------------------------------TATGTGTAAAATG................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................ACAAG-------CAAAGCAAGTTGA................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........G-GCCGATT-------------------------------------AGCTATGGACATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAAAGCAAGTTGAAAAAG...........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GATT-------------------------------------AGCTATGGACATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ATA----T-------------GTATGAA------------------------------------------------------------------------------TATGTGTAAATG.................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEug1
ATACTTT---------------------------------------TTACTCTACGAGTAACGGGTATAAAAAGA--------------A--AGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCCAAAATT-CCTTTTTG---------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATACTTTCCGAC-----------------GAATCTAGTATACCCTTTCACTCTACGAGTTACGGGTATAAAAAT---------------TATATAATAT---------ACA----GGA-------TTTTA--TTCTTC--GAATCAAAAGC-------AAAAACATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGTTAT---AAC-----------------CAAAATAAGATTTTCTTCGTCTTCCCAAAATGAAAATTTAATTCTG------------T----------------------------------TTG-----CCAGTT--TGTCAGTT--TG------TCCAAAACATGTT---------------------------------------------------------------------------------------------------------------------------------TT-------------TTATGTTTTGAAAATTTGATATGACG---------------------------------------------------------------T---------TCATCACATCGA-TATAAAA--------------------AACTTTTGTTCTACCAAAGAC-ATTA-GAATATGAAGATGGATAACG-CCATACGA---------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATACATTTCAAC-----------------GAATACAATATACCCTTTTACTCTACTAGTAACAAGTATAAAAATTAAGGACTTAGGGTCCGTAAGCTTTTAACTTATAGCCTCATATAAAAAGGGTTTGTT-------C------AAAAGTCAAAATATGAT---------------------------------------------------------------------------TTTTTTTTGAATTTTTTT------------------------------------TATATATTTGTATTATATAAATAT------AAAATGTTGAATAGAGTG------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATACTTTTGCAC-----------------GAATACAATATACCCTTTTACTCTACGAGTAACGGGTATAAAAAC----------------------TC--------------------------------------------------------------------------ATATTCTGTCCCACTTTAAC--------------------------------AGAAAGCTCTCTTCTTTTGGATCTTCTTCGTATTAAGCCTGTTTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCAGGGCCCGATCAAAGACCAATATAAACACCAAGATGCGTAACG-CCATACGATTTTTTTGCACACGASizeHit CountTotal NormTotal
No Reads
droKik1
GAAAACAACATT-----------------GG------------------ATTGCTGCGAAGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTACCAAAGAC-AATA-GAGCTATAAGATAAGTAACG-CCATACGA---------------SizeHit CountTotal NormTotal
No Reads
droBip1
ATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droWil2
ATACATTTTGGC-----------------GACTTTAATA------------------CCTATGGGTGTATAGT-----------------ATAATTAAT---------GCTTTGAGCAATTTTAG-----CTTGTT--TTTCAGTAACAG------TGCAAATCATGTTTGAA---------------------------------------------------------------------------TTCTTT-----------------------G-------------------------------------------------------------ATAGGCA------------------------------------TTTTTTCTTTAT--ATTTTCAA-------------------------AA----------------------------------------------------------------------------ATATTTTTGTTTGAGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ACAAGTACAATT-----------------TACACTAATACCCATTT----TTAATGGGTTCAGGGTATACA----------------------AATTTC---------GAA----GTAGA-----TTTATT--CCGTAG-TTGATAGTAAT-------TACCACAAAATTTAACT-------------------------------------------------AAA---------------------CT--------------GTT-TTTAGTTTGGACCGGAATATTTATATATATTTAAACTATATATATATATGAAT-----------------A------------------------------------------------------------------------TA--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................T----TTAATGGGTTCAGGGTATACA----------------------AAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.204000000000000000001001000000000010000000000000000000000000000010
...........................................TTT----TTAATGGGTTCAGGGTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000200000000000000000000000000000000
....................................................AATGGGTTCAGGGTATACA----------------------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..................................TAATACCCATTT----TTAATGGGTTCAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000010000000000000000000000000000000000
............................................TT----TTAATGGGTTCAGGGTATACA----------------------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
....................................................AATGGGTTCAGGGTATACA----------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000010000000000000000000000000000000
........................................CCATTT----TTAATGGGTTCAGGGTATACA----------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................TTAACT-------------------------------------------------AAA---------------------CT--------------GTT-TTTAGT.........................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
........................................CCATTT----TTAATGGGTTCAGGGTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
........................................CCATTT----TTAATGGGTTCAGGGTATACA----------------------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
ATACTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:58 PM