ID:

der_1358

 Coordinate:

scaffold_4929:18609102-18609252 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.8 -12.3 -12.0

Flybase annnotation

CDS [Dere\GG10671-cds]; exon [dere_GLEANR_10574:11]; intron [Dere\GG10671-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCCGCCGCGTCTCCACCAAAAACGAAGTCCTTTTGGCCTCGCCTCCCAAGTGGATTAATTCCTAGATTAGCTCCAGTCCTAGTCCCAGTCGAAGGTTGTGCAGCTTACAAATTGTGATACGTTTTTTAAGAGAGTTAGGATTGTGCTATATATGTATGTCTGTGCCTGATGTGCCAGGTCACCGAGCTCCAAGTTCGTCGACCAGTTAATTTTCGAAAGTATTCTGCTCCCAGCAGGTCTTTATGTTTAG
*****************************************************************************************************************..................((......(((((.((.((((..((((....))))...))))))))).))......))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 V108
head
 V040
embryo
 V060
head
 M057
embryo
.TCCCCGGCATCTCCACCAAAA..................................................................................................................................................................................................................................... 21 3 1 2.00 2 2 0 0 0 0 0
.................................................................................................................TGTGATACGTTTTTTAAGAGA..................................................................................................................... 21 0 1 2.00 2 0 1 1 0 0 0
.TCCCCGGCATCTCCACCAA....................................................................................................................................................................................................................................... 19 3 20 1.75 35 22 0 11 1 0 1
.TCCCCCGCATCTCCACCA........................................................................................................................................................................................................................................ 18 2 11 1.64 18 16 0 1 1 0 0
.TCCCCGGCGTCTCCACCA........................................................................................................................................................................................................................................ 18 2 7 1.14 8 6 1 1 0 0 0
.................................................................................................................................................................................................................ATTTTCGAAAGTATTCTGCTCCCA.................. 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TCGAAGGTTGTGCAGCTTACAA............................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................GCTCCAAGTTCGTCGACC............................................... 18 0 1 1.00 1 0 0 1 0 0 0
......................................................................................CAGTCGAAGGTTGTGCAGCTTACA............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................GATGTGCCAGGTCACCGAGCT.............................................................. 21 0 1 1.00 1 0 0 0 0 1 0
.........................................................................................................................................................................................AGCTCCAAGTTCGTCGACC............................................... 19 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................AATTGTGATACGTTTTTTAAGA....................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................ACGTTTTTTAAGAGAGTTAGGAT............................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................GTGTCTGTGCCTGATGTG............................................................................. 18 1 1 1.00 1 0 0 1 0 0 0
............................................................................GTCCTAGTCCCAGTCGAAGGTTGTGCA.................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
....................................................................................CCCAGTCGAAGGTTGTGCAGC.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..CCCCGGCGTCTCCACCAAAA..................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................AAAGTATTCTGCTCCCAGCT............... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................ATTCCTAGATTAGCTCCAG.............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................TTGTGATACGTTTTTTAAG........................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................GTCTGTGCCTGATGTGCCAGG........................................................................ 21 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................GCTCCCAGCACGTTCTTATGTT... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................................................................................GTGATACGTTTTTTAAGAGA..................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................ATTGTGCTATATATGTATGTCT......................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.TCCCCGGCATCTCCACCAAA...................................................................................................................................................................................................................................... 20 3 7 1.00 7 7 0 0 0 0 0
....................................................................................CCCAGTCGAAGGTTGTGC..................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................GCCAGGTCACCGAGCTCCAAGTTCGTC................................................... 27 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................GATACGTTTTTTAAGAGAGT................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
GTCCCCGGCGTCTCCACCA........................................................................................................................................................................................................................................ 19 2 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................GAGTTAGTATTGTGCTAT..................................................................................................... 18 1 2 0.50 1 0 0 0 1 0 0
.................................................................................GGTCCCAGTCTAGGGTTGTGC..................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
.ACCCCCGCGTCTCCACCA........................................................................................................................................................................................................................................ 18 2 5 0.40 2 0 1 0 1 0 0
GTACCCGGCGTCTCCACCA........................................................................................................................................................................................................................................ 19 3 13 0.38 5 0 3 2 0 0 0
..CCCCGGCATCTCCACCAAAAA.................................................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0
..........................................................................................................................................TGATTGTGCTACATATGGAT............................................................................................. 20 3 17 0.06 1 0 0 0 1 0 0
....................................................................................................................GATGCGTTTTTAAAGAGAGA................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

CAGGCGGCGCAGAGGTGGTTTTTGCTTCAGGAAAACCGGAGCGGAGGGTTCACCTAATTAAGGATCTAATCGAGGTCAGGATCAGGGTCAGCTTCCAACACGTCGAATGTTTAACACTATGCAAAAAATTCTCTCAATCCTAACACGATATATACATACAGACACGGACTACACGGTCCAGTGGCTCGAGGTTCAAGCAGCTGGTCAATTAAAAGCTTTCATAAGACGAGGGTCGTCCAGAAATACAAATC
**************************************************************..................((......(((((.((.((((..((((....))))...))))))))).))......))***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 M055
female body
 V060
head
.................................................................................TCAGGGTCAGCTTCCAACACG..................................................................................................................................................... 21 0 1 1.00 1 0 1 0
................................................................TCTAATCGAGGTCAGGATCAG...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
................................................................................................................................................................................................................................GACGAGGTTCGTCCAAAAATAT..... 22 3 2 0.50 1 0 0 1
............................................................................................................................AAAATTATCTGAATCCTAA............................................................................................................ 19 2 6 0.17 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4929:18609052-18609302 + der_1358 GTCCGCCGCGTCTC---CACCAAAAACGAAGTCCTTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---TTAATTCCTAGAT-TAG----------CTCCAGTCC-------TAGTCCC-AGTC------GAAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAC--GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATATATG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCACCGAGCTCCAAGT---TCGTCGACCAGT--TAATTTTCGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--TTAG
droYak3 2L:16674711-16674964 - dya_349 GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---TAAATTCCTAGAC-TAG----------CTCCAGTCC-------TACCCCC-AGTC------CAAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAA--GTTCTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATATATG---------------TAT-----------GTAC---ATCTGTGCCTGAT-GTGCCAGGTCAGCGAACTCCAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CC-GCAGGT-CTTTATGT--TTAG
droSec2 scaffold_1:1663484-1663734 - GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---GTAATTCCTAGAT-TAG----------CTCCAGTCC-------TAGCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------CA----AATTGTGATAA--GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGCCAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTT-CTTTATGT--TTAG
droSim2 2r:4842383-4842633 - GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---GTAATTCCTAGAT-TAG----------CTCCAGTCC-------TAGCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------CA----AATTGTGATAA--GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGCCAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTT-CTTTATGT--TTAG
dm3 chr2R:4025555-4025805 - GTCCGCCGCGTCTC---CACCAAAAACGAAGTCATTATGGCTTCGCCT----------------------------------CCCA-----A-GTGGA---TTAATTCCTAGAC-TAG----------CTCCAGTCC-------TAGCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------CA----AATTGTGATGT--TTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--TTAG
droEug1 scf7180000409474:2850760-2851034 - ATTCG--------------------------TAATTTTAGGCAAAACCCAAAAATAGAAAAAAAAAAAAATCATCCTTGAAGGACA---------GGC---TGAATTCCTAGGCATAC----------CTCAAGTCC-------TATCCCA-ACCC------GAAGGTTGT--GTAGCTAA-------------AA----AATTGTGATAC--ATTTTCTAAG----------------------ACAG---TTAGGAT----TG--T------CCTATATGTTTATATATTATATATACTT-----------G-------TATGTGCCTGAT-GTGCCAGGTCTACGAACTAAAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--CTAG
droBia1 scf7180000302291:1878718-1878963 - GTCCGCCGCGACTC---CTCTAAAAACGAGGTCATCTTGGCCTCGCCC----------------------------------CCCA-----A-GTGGC---TGAATTCCTAGACACCC----------CTAGAGTCC-------TTTCCCA-CGCC------GATGGTTGT--GCAGCCTA-------------AA----AATTGTGATAA--GTTTTCTAAA----------------------AGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCTGCGAGCTCTAAGT---TCGCCGACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGTT-CTT--TGT--CTAG
droTak1 scf7180000415088:79220-79473 + GTCCGCCGCGTCTC---CTCCAAAAACGAGGTCATCCTGGCCTCGCCC----------------------------------CCCA-----A-GTGGT---TAAATTCCTAGACATAG----------CTCCAGTCC-------TTTCCCAAAGCC------GAAGGTTGT--GCAGCTTG-------------CG----AATTGTGATAA--GTTTTCTAAG------------------AGAGAGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCAGCGAGCTCCAAGT---TCGCCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGTCCTTTATGT--CTAG
droEle1 scf7180000491240:825852-826120 - GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATCTTGGCCTCGCCC----------------------------------CCCA-----A-GTGGT---TGAATTCCTAAAT-TAG----------CCACAGTCC-------TATCCCA-AGCC------GATGGTTGT--GCAGCCTA-------------CA----AATTGTGATAA--GTTTTCTAAGAAAGAGAGAGAGAGAGAGAGAGAGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCCGCGAGCTCCAAGT---TCGCCGACCAGT--TATGTTTGGAAAGTATTCTGCTC----CCAGCAGGT-CTTGATGT--TTAG
droRho1 scf7180000770177:113311-113558 - GTCCGCCGTGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCC----------------------------------CCCA-----A-GTGGT---TGAATTCCTAGATATAG----------CTACAGTCC-------TATCCCA-AACC------GAAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAA--GTTTTCTAAG----------------------AGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCAGCGAGCTTCAAGT---TCGCCAACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--CTAG
droFic1 scf7180000453215:181363-181619 + GTCCGTCGCGTCTC---CACCAAAAACGAGCTCATCCTGGCCCCAGGC----------------------------------CGCA-----A-ATT--------ATTCCTATAG--AG----------CTCCAAACC-------TATTCCC-AGCC------GAAGGTTGT--GCAGCTAG-------------CA----AATTGTGATAA--GTTTTCTAAA----------------------AGAG---TTAGGAG----TG--T------CCTATATATA---ATATCGTACCTATAT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCCGGAAGCTCCAAGT---TCGCCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGCT-TTTTATGT--CTAG
droKik1 scf7180000302476:1442295-1442548 + GTGCGCCGCGAGTCGGCCACCAAGAACAAGGTGGACCTGGCCCTGGCG----------------------------------ACCA-----G-ATGGTCGTCGAATTCCCAGACCTAG----------TT--------------------G-AGCT------GCAGGC--T--GCAGCTGA----------CAACA----AATTGTGATAA--GTTTTCTAAC----------------------AGAG---TTAGGAG----TG--T----GTCCTATAT-------------------A--CTAGTTATATATACCATAAATG----TGA--GTGCCAGATCTGCAAACTCCAAGT---TTGCGGACCAGT--TAAGTTTGGAAAGTATTCTGCA-----ATAGCAGGT-CTTTATGT--TTAG
droAna3 scaffold_13266:16338148-16338381 - GTCCGCCGGGTCTC---GACCAAGACCGAGGTGGTCCTCGCCTCGCCA----------------------------------CCCA-----A-ATGGT---CAAATTCCTAGGC-CCT-----------GAAGGTCC-------------------------------TGT--GCTGAAGA-------------CAAATGAAATGTGATAA--GTT-----AG----------------------GAAG---TTAGGAAGAAGGATGT------CCTGT----------------CC--TGT-TTTGTTGTT--------------------T-TTGTCGGCCGAG-GAG--TGTCGGTGTCGGCCGATCAGT--TGTGTTTGAAAAGTATTCTGCTC----CGAGCAGGT-CTTCATGTTGTTAG
droBip1 scf7180000395838:126533-126763 + GTCCGGAGGGTCTC---GACCAAGACCGAGGTGGTCCTCGCCTCGCCC----------------------------------CCCA-----A-ATGGT---CAAATTCCTAGGCCCAG----------TTCCAGCCCAAGCAAGTCTCCCC-AGCC---CAAGAAGGTTGT--GCAGCTGA-------------CAAATTAAATGTGATAA--GTT-------------------------------AG---TTAGGAG-GAGTA--T----GTCCTGTTT-------------------G------TTGTT-G-------TGTGT-------------------------------------GCCGATCGGT--TATGTTTGAAAAGTATTCTGCTC----CGAGCAGGT-CTTCATGTTGTTAG
dp5 3:7781682-7781980 + AGCCGCCGTGTGTC---GACCAAGAACGAAGTGGCCTTG------CTG-------------------------CCCTCACACGGCAACCTAACTTGGC---TGGATTCCTAGAC-CATGTAACCATAACCAGAACCC-------TGCCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGGAATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTGAG----------------------AGAGCTATTAGGAG----TG--TCCGTG-----T----------------CC--CATGTTTGTTGTG-----------------TAGTAGTGCCGGG-----G--GGCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGC-CTAAATGT--TTAG
droPer2 scaffold_4:1691867-1692165 + AGCCGCCGTGTGTC---GACCAAGAACGAAGTGGCCTTG------CTG-------------------------CCCTCACACGGCAACCTAACGTGGC---TGGATTCCTAGAC-CATGTAACCATAACCAGAACCC-------TGCCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGGAATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTGAG----------------------AGAGCTATTAGGAG----TG--TCCGTG-----T----------------CC--CATGTTTGTTGTG-----------------TAGTAGTGCCGGG-----G--GGCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGC-CTAAATGT--TTAG
droWil2 scf2_1100000004954:2824401-2824436 - ---CGCCGCGTGTC---TGCCAAAAACGAAGTGCTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:14940828-14940884 - ACTCACCATGGG------GCCAAAAATGAAATAATATTATCCTCACCA----------------------------------CCCA-----A-ATGGC---TAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GTCCGCCGCGTCTC---CACCAAAAACGAAGTCCTTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---TTAATTCCTAGAT-TAG----------CTCCAGTCC-------TAGTCCC-AGTC------GAAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAC--GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATATATG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCACCGAGCTCCAAGT---TCGTCGACCAGT--TAATTTTCGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--TTAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................TGTGATAC--GTTTTTTAAG----------------------AGA..................................................................................................................................................................................2112.0020000110
.........................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGAAAGTATTCTGCTC----CCA.....................2411.0011000000
..........................................................................................................................................................TC------GAAGGTTGT--GCAGCTTA-------------CA----A.................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGACC........................................................1811.0010000010
......................................................................................................................................................C-AGTC------GAAGGTTGT--GCAGCTTA-------------CA----..................................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................................................................................................................................................GAT-GTGCCAGGTCACCGAGCT..........................................................................2111.0010010000
............................................................................................................................................................................................................................................................................................................................................................AGCTCCAAGT---TCGTCGACC........................................................1911.0010000100
........................................................................................................................................................................................................AATTGTGATAC--GTTTTTTAAG----------------------A....................................................................................................................................................................................2211.0010000010
.................................................................................................................................................................................................................AC--GTTTTTTAAG----------------------AGAG---TTAGGAT----...................................................................................................................................................................2311.0010000100
.....................................................................................................................................GTCC-------TAGTCCC-AGTC------GAAGGTTGT--GCA..........................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................CCC-AGTC------GAAGGTTGT--GCAGC........................................................................................................................................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................AAAGTATTCTGCTC----CCAGCT..................2011.0011000000
........................................................................................................ATTCCTAGAT-TAG----------CTCCAG....................................................................................................................................................................................................................................................................................................1911.0011000000
..........................................................................................................................................................................................................TTGTGATAC--GTTTTTTAAG----------------------.....................................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................................................................................................................................................G-------TCTGTGCCTGAT-GTGCCAGG....................................................................................2111.0010001000
............................................................................................................................................................................................................GTGATAC--GTTTTTTAAG----------------------AGA..................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................AT----TG--T------GCTATATATG---------------TAT-----------G-------TCT......................................................................................................2211.0010000100
....................................................................................................................................................CCC-AGTC------GAAGGTTGT--GC...........................................................................................................................................................................................................................................................1811.0010000010
................................................................................................................................................................................................................................................................................................................................................GCCAGGTCACCGAGCTCCAAGT---TCGTC............................................................2711.0011000000
..............................................................................................................................................................................................................GATAC--GTTTTTTAAG----------------------AGAG---T.............................................................................................................................................................................2011.0010000100
droYak3
GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---TAAATTCCTAGAC-TAG----------CTCCAGTCC-------TACCCCC-AGTC------CAAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAA--GTTCTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATATATG---------------TAT-----------GTAC---ATCTGTGCCTGAT-GTGCCAGGTCAGCGAACTCCAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CC-GCAGGT-CTTTATGT--TTAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................GACCAGT--TAAGTTTTGAAAGTATT..................................2412.00200000020000
............................................................................................................................................................................................................................................................................................................................................................AACTCCAAGT---TCGTCGACCAGT--TAAG...............................................2612.00211000000000
.............................................................................................................................................................................................................................AG----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................1911.00100000010000
...................................................................................................................................................................AAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAA--.....................................................................................................................................................................................................................2911.00100000010000
........................................................................................................................................C-------TACCCCC-AGTC------CAAGGTTGT--GCAGC........................................................................................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................GCCTGAT-GTGCCAGGTCAGCG..............................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................CTGTGCCTGAT-GTGCCAGGTC..................................................................................2111.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTTTTGAAAGTATTCTGCTC----CC-.....................2211.00100100000000
.......................................................................................................................................................................................................................TCTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTA....................................................................................................................................................2611.00100000010000
............................................................................................................................................................................................................................................................................................................................................................AACTCCAAGT---TCGTCGACCAGT--...................................................2211.00100100000000
.......................................................................................................................................................................................................................................................................................ATATG---------------TAT-----------GTAC---ATCTGTGCCTGA..............................................................................................2411.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................AGTATTCTGCTC----CC-GCAGGT-CT............2211.00100100000000
....................................................................................................................................................................................A-------------CA----AATTGTGATAA--GTTCTTTAAG----------------------AGA..................................................................................................................................................................................2711.00101000000000
.................................................................................................................................................ACCCCC-AGTC------CAAGGTTGT--GC...........................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................GTGATAA--GTTCTTTAAG----------------------AGAG---T.............................................................................................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGACCAGT--TAAGTTTTGAAA.......................................2311.00100000010000
........................................................................................................................................................................................................................CTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTAT...................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................................................................................................................AACTCCAAGT---TCGTCGAC.........................................................1811.00110000000000
.....................................................................................................................................................CC-AGTC------CAAGGTTGT--GCAGCT.......................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................TCCAAGT---TCGTCGACCAGT--T..................................................2011.00100000100000
droSec2
GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---GTAATTCCTAGAT-TAG----------CTCCAGTCC-------TAGCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------CA----AATTGTGATAA--GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGCCAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTT-CTTTATGT--TTAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAGT--T..................................................2211.0010100
.........................................................................................................................................................................................................................TTTAAG----------------------AGAG---TTAGGAT----TG--T------GC......................................................................................................................................................2211.0010010
............................................................................................................................................................................................................................................................................................................................................T-GTGCCAGGCCAGCGAGCT..........................................................................1911.0010001
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCA.......................................................1911.0010010
.......................................................................................................................................CC-------TAGCCCC-AGTC------GAAGGTTGT--GCA..........................................................................................................................................................................................................................................................2511.0011000
droSim2
GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCT----------------------------------CCCA-----A-GTGGA---GTAATTCCTAGAT-TAG----------CTCCAGTCC-------TAGCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------CA----AATTGTGATAA--GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGCCAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGTT-CTTTATGT--TTAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................ATAA--GTTTTTTAAG----------------------AGAG---TTAGGAT----T..................................................................................................................................................................2614.00400400000000000000
...................................................................................................................................................................................................................................................................................CTATACCTG---------------TAT-----------G-------TCTGTGCCT................................................................................................2213.00300300000000000000
............................................................................................................................................................................................................................AAG----------------------AGAG---TTAGGAT----TG--T------GCTATAC.................................................................................................................................................2413.00300200000001000000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAGT--...................................................2112.00200100000000001000
.......................................................................................................................................................................................................................TTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GC......................................................................................................................................................2412.00201000000000100000
.......................................................................................................................................................................................................................................................................................ACCTG---------------TAT-----------G-------TCTGTGCCT................................................................................................1812.00200200000000000000
.......................................................................................................................................................................................................................TTTTTAAG----------------------AGAG---TTAGGA........................................................................................................................................................................1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................ATACCTG---------------TAT-----------G-------TCTGTGCCT................................................................................................2012.00201100000000000000
.............................................................................................................................................................................................................................AG----------------------AGAG---TTAGGAT----TG--T------GCTAT...................................................................................................................................................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................TATACCTG---------------TAT-----------G-------TCTGTGCCT................................................................................................2111.00100100000000000000
..............................................................................................................................................................................................................................G----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................1811.00100100000000000000
..........................................................................................................................................................................................................................................................................................TG---------------TAT-----------G-------TCTGTGCCTGAT-GT..........................................................................................2011.00100010000000000000
......................................................................................................................................................................................................................TTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................2611.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAGT--TAAGTT.............................................2711.00100100000000000000
.....................AAAAACGAGGTCATTTTGGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.....................................................................................................................................................................................................................GTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCC.....................................................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................AAG----------------------AGAG---TTAGGAT----TG--T------GCTATACC................................................................................................................................................2511.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCTCCAAGT---TCGTCGGCC........................................................1911.00100100000000000000
......................................................................................................................................................C-AGTC------GAAGGTTGT--GCAGCTT......................................................................................................................................................................................................................................................2111.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................G-------TCTGTGCCTGAT-GTGCCAGG....................................................................................2111.00100100000000000000
.....................................................................................................................................................................................................................................................AGAG---TTAGGAT----TG--T------GCTATACC................................................................................................................................................2211.00110000000000000000
...........CTC---CACCAAAAACGAGGTCA........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.....................................................................................................................................................................................................................GTTTTTTAAG----------------------AGAG---TTAGGAT----...................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................AG----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................1911.00101000000000000000
..................................................................................CCCA-----A-GTGGA---GTAATTCC.............................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCCAGT--TAAGTTTCGAAAGT.....................................2011.00100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCA.......................................................1911.00100010000000000000
........................................................................................................................................................................................................................TTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................2411.00101000000000000000
....................................................................................................................................................................................................................................................................................TATACCTG---------------TAT-----------G-------TCTGTGCC.................................................................................................2011.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................TGCCTGAT-GTGCCAGGCCAGCGA.............................................................................2311.00100000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................GT--TAAGTTTCGAAAGTATTCTGCTC----........................2511.00100010000000000000
............................................................................................................................................................................................................................AAG----------------------AGAG---TTAGGAT----TG--T------GCTATA..................................................................................................................................................2311.00100100000000000000
..........................................................................................................................................................................................................................TTAAG----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................2211.00101000000000000000
dm3
GTCCGCCGCGTCTC---CACCAAAAACGAAGTCATTATGGCTTCGCCT----------------------------------CCCA-----A-GTGGA---TTAATTCCTAGAC-TAG----------CTCCAGTCC-------TAGCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------CA----AATTGTGATGT--TTTTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCAGCGAGCTCCAAGT---TCGTCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--TTAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................TTTAAG----------------------AGAG---TTAGGAT----TG--T------G.......................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................CCAGTCC-------TAGCCCC-AGTC------GA......................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TACCTG---------------TAT-----------G-------TCTGTGCCTGAT-GTGC........................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................GAGCTCCAAGT---TCGTCGGC.........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................TTAAG----------------------AGAG---TTAGGAT----TG--T------GCTAT...................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCTATACCTG---------------TAT-----------G-------TCTGTGCC.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCC........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TCGGCCAGT--TAAGTTTCGA.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CCAGGTCAGCGAGCTCCAAGT---TCG..............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................CCAAAAACGAAGTCATTATGGCT................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TATACCTG---------------TAT-----------G-------TCTGTGCCTGAT-G...........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCA.......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................TGAT-GTGCCAGGTCAGCGAGCTCCA.......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................................................................................................................................................................................................................................GAT----TG--T------GCTATACCTG---------------TAT-----------G-------T........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GTGCCAGGTCAGCGAGCTCCAAGT---T................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................GCTTCGCCT----------------------------------CCCA-----A-GTGGA---TT...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCGAAAGTATTCTGCTC----CCAG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................AGT---TCGTCGGCCAGT--TAAGTTTCG..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................GGTTGT--GCAGCTTG-------------CA----AATTGTGA..........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCTCCAAGT---TCGTCGGCCAG......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GCCCC-AGTC------GAAGGTTGT--GCAGCTTG-------------........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................A---TTAATTCCTAGAC-TAG----------CTCC......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................AGTTTCGAAAGTATTCTGCTC----CCA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GC......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGGAT----TG--T------GCTATACCTG---------------TAT-----------G-------T........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GA---TTAATTCCTAGAC-TAG----------CTCC......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGCCAGGTCAGCGAGCTCCAAGT---TCGTC............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................GTCGGCCAGT--TAAGTTTCGAAAGT.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GTGCCTGAT-GTGCCAGGTCAGCGA.............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTAGGAT----TG--T------GCTATACCTG---------------T..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AGCCCC-AGTC------GAAGGTTGT--.............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TCGAAAGTATTCTGCTC----CCAGCAGG................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TGATGT--TTTTTTTAAG----------------------AGAG---T.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTTTTAAG----------------------AGAG---TTAGGAT----TG--T------GCT.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TAT-----------G-------TCTGTGCCTGAT-GTGCC.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTAGGAT----TG--T------GCTATACCTG---------------G..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCTCCAAGT---TCGTCGGC.........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTCTC---CACCAAAAACGAA............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................AATTCCTAGAC-TAG----------CTCCAGT...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................................................................................GAG---TTAGGAT----TG--T------GCTATACC................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CGCCT----------------------------------CCCA-----A-GTGGA---TTAATTCCT............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TC------GAAGGTTGT--GCAGCTTG-------------CA----AATTG.............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGGCCAGT--TAAGTTTCGAAAGT.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTATGGCTTCGCCT----------------------------------CCCA-----A-GTGGA---TTAATT...............................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................G----------CTCCAGTCC-------TAGCCCC-AGT...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTTCGAAAGTATTCTGCTC----CCAGCAGG................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TG---------------TAT-----------G-------TCTGTGCCTGAT-GTGCCAGG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................T-GTGCCAGGTCAGCGAGCT..........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GCAGCTTG-------------CA----AATTGTGAGA........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CC-------TAGCCCC-AGTC------GAAGGTT.................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEug1
ATTCG--------------------------TAATTTTAGGCAAAACCCAAAAATAGAAAAAAAAAAAAATCATCCTTGAAGGACA---------GGC---TGAATTCCTAGGCATAC----------CTCAAGTCC-------TATCCCA-ACCC------GAAGGTTGT--GTAGCTAA-------------AA----AATTGTGATAC--ATTTTCTAAG----------------------ACAG---TTAGGAT----TG--T------CCTATATGTTTATATATTATATATACTT-----------G-------TATGTGCCTGAT-GTGCCAGGTCTACGAACTAAAAGT---TCGTCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--CTAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTCCGCCGCGACTC---CTCTAAAAACGAGGTCATCTTGGCCTCGCCC----------------------------------CCCA-----A-GTGGC---TGAATTCCTAGACACCC----------CTAGAGTCC-------TTTCCCA-CGCC------GATGGTTGT--GCAGCCTA-------------AA----AATTGTGATAA--GTTTTCTAAA----------------------AGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCTGCGAGCTCTAAGT---TCGCCGACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGTT-CTT--TGT--CTAGSizeHit CountTotal NormTotal
No Reads
droTak1
GTCCGCCGCGTCTC---CTCCAAAAACGAGGTCATCCTGGCCTCGCCC----------------------------------CCCA-----A-GTGGT---TAAATTCCTAGACATAG----------CTCCAGTCC-------TTTCCCAAAGCC------GAAGGTTGT--GCAGCTTG-------------CG----AATTGTGATAA--GTTTTCTAAG------------------AGAGAGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCAGCGAGCTCCAAGT---TCGCCGACCAGT--TAAGTTTTGAAAGTATTCTGCTC----CCAGCAGGTCCTTTATGT--CTAGSizeHit CountTotal NormTotal
No Reads
droEle1
GTCCGCCGCGTCTC---CACCAAAAACGAGGTCATCTTGGCCTCGCCC----------------------------------CCCA-----A-GTGGT---TGAATTCCTAAAT-TAG----------CCACAGTCC-------TATCCCA-AGCC------GATGGTTGT--GCAGCCTA-------------CA----AATTGTGATAA--GTTTTCTAAGAAAGAGAGAGAGAGAGAGAGAGAGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCCGCGAGCTCCAAGT---TCGCCGACCAGT--TATGTTTGGAAAGTATTCTGCTC----CCAGCAGGT-CTTGATGT--TTAGSizeHit CountTotal NormTotal
No Reads
droRho1
GTCCGCCGTGTCTC---CACCAAAAACGAGGTCATTTTGGCCTCGCCC----------------------------------CCCA-----A-GTGGT---TGAATTCCTAGATATAG----------CTACAGTCC-------TATCCCA-AACC------GAAGGTTGT--GCAGCTTA-------------CA----AATTGTGATAA--GTTTTCTAAG----------------------AGAG---TTAGGAG----TG--T------CCTATAT-------------------AT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCAGCGAGCTTCAAGT---TCGCCAACCAGT--TAAGTTTCGAAAGTATTCTGCTC----CCAGCAGGT-CTTTATGT--CTAGSizeHit CountTotal NormTotal
No Reads
droFic1
GTCCGTCGCGTCTC---CACCAAAAACGAGCTCATCCTGGCCCCAGGC----------------------------------CGCA-----A-ATT--------ATTCCTATAG--AG----------CTCCAAACC-------TATTCCC-AGCC------GAAGGTTGT--GCAGCTAG-------------CA----AATTGTGATAA--GTTTTCTAAA----------------------AGAG---TTAGGAG----TG--T------CCTATATATA---ATATCGTACCTATAT-----------G-------TCTGTGCCTGAT-GTGCCAGGTCCGGAAGCTCCAAGT---TCGCCGGCCAGT--TAAGTTTCGAAAGTATTCTGCTC----GCAGCAGCT-TTTTATGT--CTAGSizeHit CountTotal NormTotal
No Reads
droKik1
GTGCGCCGCGAGTCGGCCACCAAGAACAAGGTGGACCTGGCCCTGGCG----------------------------------ACCA-----G-ATGGTCGTCGAATTCCCAGACCTAG----------TT--------------------G-AGCT------GCAGGC--T--GCAGCTGA----------CAACA----AATTGTGATAA--GTTTTCTAAC----------------------AGAG---TTAGGAG----TG--T----GTCCTATAT-------------------A--CTAGTTATATATACCATAAATG----TGA--GTGCCAGATCTGCAAACTCCAAGT---TTGCGGACCAGT--TAAGTTTGGAAAGTATTCTGCA-----ATAGCAGGT-CTTTATGT--TTAGSizeHit CountTotal NormTotal
No Reads
droAna3
GTCCGCCGGGTCTC---GACCAAGACCGAGGTGGTCCTCGCCTCGCCA----------------------------------CCCA-----A-ATGGT---CAAATTCCTAGGC-CCT-----------GAAGGTCC-------------------------------TGT--GCTGAAGA-------------CAAATGAAATGTGATAA--GTT-----AG----------------------GAAG---TTAGGAAGAAGGATGT------CCTGT----------------CC--TGT-TTTGTTGTT--------------------T-TTGTCGGCCGAG-GAG--TGTCGGTGTCGGCCGATCAGT--TGTGTTTGAAAAGTATTCTGCTC----CGAGCAGGT-CTTCATGTTGTTAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................GAG-GAG--TGTCGGTGTCGGCC............................................................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................GGCCGAG-GAG--TGTCGGTGTCGGC.............................................................2311.001010000
...................................................................................................................................................................................GA-------------CAAATGAAATGTGATAA--GTT-----AG----------------------.....................................................................................................................................................................................2411.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................GTTTGAAAAGTATTCTGCTC----........................2011.001010000
.....................................................................................................................................................................................................................................................................................GT----------------CC--TGT-TTTGTTGTT--------------------T-TTGTCGGC....................................................................................2511.001000010
..................................................................................................................................................................................................................................................................................................................GTTGTT--------------------T-TTGTCGGCCGAG-GAG--TGT.......................................................................2511.001010000
..............................................................................................................................................................................................................................................................................................................................................................................GATCAGT--TGTGTTTGAAA........................................1811.001000001
....................................................................................................................................................................................................AATGAAATGTGATAA--GTT-----AG----------------------GA...................................................................................................................................................................................2211.001010000
.................GACCAAGACCGAGGTGGTCCTCGCCT...............................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
............................................................................................................................................................................................................................................................TTAGGAAGAAGGATGT------CCTGT----------------CC--TGT-T..........................................................................................................................2711.001000010
.....................................................................................................................T-----------GAAGGTCC-------------------------------TGT--GCTGAAGA-------------CA......................................................................................................................................................................................................................................2211.001100000
...............................................................................................................GGC-CCT-----------GAAGGTCC-------------------------------TGT--GCTGAAGA-------------CA......................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATTCTGCTC----CGAGC...................2011.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCTC----CGAGCAGGT-CTTCATGTT.....2211.001000010
...................................................................................................................CCT-----------GAAGGTCC-------------------------------TGT--GCTGAAGA-------------CAAAT...................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................GCTGAAGA-------------CAAATGAAATGT............................................................................................................................................................................................................................2011.001001000
............................................................................................................................................................................................................................................................................................................GT-TTTGTTGTT--------------------T-TTGTCGGCC...................................................................................2111.001010000
...................................................................................................................CCT-----------GAAGGTCC-------------------------------TGT--GCTGAAGA-------------C.......................................................................................................................................................................................................................................2311.001010000
droBip1
GTCCGGAGGGTCTC---GACCAAGACCGAGGTGGTCCTCGCCTCGCCC----------------------------------CCCA-----A-ATGGT---CAAATTCCTAGGCCCAG----------TTCCAGCCCAAGCAAGTCTCCCC-AGCC---CAAGAAGGTTGT--GCAGCTGA-------------CAAATTAAATGTGATAA--GTT-------------------------------AG---TTAGGAG-GAGTA--T----GTCCTGTTT-------------------G------TTGTT-G-------TGTGT-------------------------------------GCCGATCGGT--TATGTTTGAAAAGTATTCTGCTC----CGAGCAGGT-CTTCATGTTGTTAGSizeHit CountTotal NormTotal
No Reads
dp5
AGCCGCCGTGTGTC---GACCAAGAACGAAGTGGCCTTG------CTG-------------------------CCCTCACACGGCAACCTAACTTGGC---TGGATTCCTAGAC-CATGTAACCATAACCAGAACCC-------TGCCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGGAATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTGAG----------------------AGAGCTATTAGGAG----TG--TCCGTG-----T----------------CC--CATGTTTGTTGTG-----------------TAGTAGTGCCGGG-----G--GGCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGC-CTAAATGT--TTAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................GGATTCCTAGAC-CATGTAACCATAACC........................................................................................................................................................................................................................................................................................................2712.0020020000000
...............................................................................................................................................................TTAGAAGGTTGTGGGCAGCTGG.....................................................................................................................................................................................................................................................2212.0020200000000
.........................................................................................TAACTTGGC---TGGATTCCTAGAC-CAT....................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................AAGGTTGTGGGCAGCTGGAA...................................................................................................................................................................................................................................................2011.0010000010000
.............................................................................................................................................................TCTTAGAAGGTTGTGGGCAGCTGGA....................................................................................................................................................................................................................................................2511.0010100000000
..............................................................................................................................AACCAGAACCC-------TGCCCTA-GTC...............................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................GGTTGTGGGCAGCTGGAAT..................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................GGGCAGCTGGAATGAAATGATGAT.......................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................GGCAGCTGGAATGAAATGATGAT.......................................................................................................................................................................................................................................2311.0010000001000
........................................................................................................................AACCATAACCAGAACCC-------TGCCCTA-GTC...............................................................................................................................................................................................................................................................................2711.0010010000000
.......................................................................................................................................................................................................................TTTCTGAG----------------------AGAGCTATTAGGA........................................................................................................................................................................2111.0010000000001
...........................................................................................................................................................................................................................................................................TCCGTG-----T----------------CC--CATGTTTGTTG....................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................G-----------------TAGTAGTGCCGGG-----G--GGCGA.......................................................................2011.0010100000000
.............................AGTGGCCTTG------CTG-------------------------CCCTCACACGG......................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
....................................................................................................................................................................................................................................................................................................................................................GG-----G--GGCGAAGC---TCTCGGGCC........................................................2011.0010100000000
...........................................................................................................................................................CTTCTTAGAAGGTTGTGGGCAGCTGGA....................................................................................................................................................................................................................................................2711.0010100000000
.....CCGTGTGTC---GACCAAGAACG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................G----TG--TCCGTG-----T----------------CC--CATGTTTGTTGTG-----------------T................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................GTG-----------------TAGTAGTGCCGGG-----G--GGC.........................................................................2011.0010100000000
.............................................................................................................................................................................GCAGCTGGAATGAAATGATG.........................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................GTG-----------------TAGTAGTGCCGGG-----G--GGCGA.......................................................................2211.0010100000000
.GCCGCCGTGTGTC---GACCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................AGCTGGAATGAAATGATGATG......................................................................................................................................................................................................................................2111.0010100000000
droPer2
AGCCGCCGTGTGTC---GACCAAGAACGAAGTGGCCTTG------CTG-------------------------CCCTCACACGGCAACCTAACGTGGC---TGGATTCCTAGAC-CATGTAACCATAACCAGAACCC-------TGCCCTA-GTCCTTCTTAGAAGGTTGTGGGCAGCTGGAATGAAATGATGATGAATGAATTGTGATAAGAGTTTTCTGAG----------------------AGAGCTATTAGGAG----TG--TCCGTG-----T----------------CC--CATGTTTGTTGTG-----------------TAGTAGTGCCGGG-----G--GGCGAAGC---TCTCGGGCCAGTCGTAAGTTTTGAAAGTATTTTGCTCAGCAGCAGCAGGC-CTAAATGT--TTAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................CAACCTAACGTGGC---TGGAT................................................................................................................................................................................................................................................................................................................................1911.001010000
.GCCGCCGTGTGTC---GACCAA...................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................C---TCTCGGGCCAGTCGTAAGTTTT...........................................2311.001100000
........................................................................................................................................................................................GAAATGATGATGAATGAATTGT............................................................................................................................................................................................................................2211.001000001
..............................................................................................................................................................CTTAGAAGGTTGTGGGCAGCTGGAAT..................................................................................................................................................................................................................................................2611.001000001
.....................................................................................................................................................................GGTTGTGGGCAGCTGGAATGAAAT.............................................................................................................................................................................................................................................2411.001000001
..............................................................................................................AGAC-CATGTAACCATAACCAGAACCC-------T.........................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................................................................................................................................................................................................C---TCTCGGGCCAGTCGTAAGTTT............................................2211.001100000
.....................................................................................................................................................................................................ATGAATTGTGATAAGAGTTTTC...............................................................................................................................................................................................................2211.001100000
......................................................................................................................GTAACCATAACCAGAACCC-------T.........................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................GTAACCATAACCAGAACCC-------TGCCCTA-GTC...............................................................................................................................................................................................................................................................................2911.001100000
.........................................................................................................................................................................GTGGGCAGCTGGAATGAAAT.............................................................................................................................................................................................................................................2011.001000001
AGCCGCCGTGTGTC---GACCAA...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.........................................................................................................................................................................GTGGGCAGCTGGAATGAAATGATGATG......................................................................................................................................................................................................................................2711.001000001
......................................................................................................................................................................GTTGTGGGCAGCTGGAATGAA...............................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................GGGCAGCTGGAATGAAAT.............................................................................................................................................................................................................................................1811.001000001
..CCGCCGTGTGTC---GACCAA...................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...................................................................................GCAACCTAACGTGGC---TGGATTCCT............................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................TGAATGAATTGTGATAAGAG....................................................................................................................................................................................................................2011.001000010
........................................................................................................................................................................................GAAATGATGATGAATGAATTGTGAT.........................................................................................................................................................................................................................2511.001000001
AGCCGCCGTGTGTC---GACC.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
---CGCCGCGTGTC---TGCCAAAAACGAAGTGCTATTGGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droGri2
ACTCACCATGGG------GCCAAAAATGAAATAATATTATCCTCACCA----------------------------------CCCA-----A-ATGGC---TAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................ATATTATCCTCACCA----------------------------------CCCA-----A-ATG..........................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/17/2015 at 11:51 PM