ID:

der_1342

 Coordinate:

scaffold_4929:17263694-17263844 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.5 -8.3

Flybase annnotation

CDS [Dere\GG16705-cds]; exon [dere_GLEANR_16848:3]; intron [Dere\GG16705-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######--------------------------------------------
GCTTCTACAGATTCTTCATCGTCCGAATCTTCCACCAGTTCTACAGCTTCTTCGCCATCTTCAAGTCCTTCACCTACTCCCCCAACAAAGTACAAGGTTGCAGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACAATGTTTTTTTTGGAACTCAATTGTTATTCAAGATATTCATTTCATATTTTTTAACCGAACAGTGTTAAACCGCGGTTGTGTTAAGGTGCCCGAAGAACAATCCGGCTGCCAG
********************************************************........((((((...................(((..((((....))))..))).........))))))...************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 V108
head
 V040
embryo
 M057
embryo
....CTACAGATTCTTCATCGTCCGA................................................................................................................................................................................................................................. 22 0 1 4.00 4 2 0 1 1 0
..........................................................................................................GTTACAGCATCTACAAGGACGGAGT........................................................................................................................ 25 1 1 4.00 4 1 3 0 0 0
.............................................GCTTCTTCGCCATCTTCAAGT......................................................................................................................................................................................... 21 0 1 3.00 3 2 0 0 0 1
............................................................................................................TACAGCATCTACAAGGACGGA.......................................................................................................................... 21 0 1 3.00 3 1 2 0 0 0
..........................ATCTTCCACCAGTTCTACAG............................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0
................................................................................................................GCATCTACAAGGACGGAGT........................................................................................................................ 19 1 1 2.00 2 0 2 0 0 0
........................................................................................................................................................................................................GTGTTAAACCGCGGTTGTGTTAAG........................... 24 0 1 2.00 2 0 2 0 0 0
.............................................GCTTCTTCGCCATCTTCAAGTC........................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0
...........................................................................................ACAAGGTTGCAGCCTGTTACAGC......................................................................................................................................... 23 0 1 2.00 2 1 0 0 1 0
..TTCTACAGATTCTTCATCGTCCGA................................................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 1 1 0
..........................................................................................................GTTACAGCATCTACAAGGACGGA.......................................................................................................................... 23 0 1 2.00 2 0 1 0 1 0
....CTACAGATTCTTCATCGTCC................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0
........................................................................................................................................................................................................GTGTTAAACCGCGGTTGTGTTAAGGT......................... 26 0 1 2.00 2 1 0 1 0 0
.....................................................................................................................................................................................................................GTAGAGTTAAGGTGCCGGAA.................. 20 3 4 1.50 6 4 0 0 2 0
........................................................ATCTTCAAGTCCTTCACCTACTCCCC......................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1
............................................................................................................TACAGCATCTACAAGGACGGAGTG....................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................GTGTTAAACCGCGGTTGTGT............................... 20 0 1 1.00 1 0 1 0 0 0
...........................................................TTCAAGTCCTTCACCTACTCCCC......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................TTAAACCGCGGTTGTGTTAAGGT......................... 23 0 1 1.00 1 0 1 0 0 0
.....................................GTTCTACAGCTTCTTCGCCATCTT.............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..............................................CTTCTTCGCCATCTTCAAGT......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................TGTTACAGCATCTACAAGGACGG........................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................AACCGCGGTTGTGTTAAGGTGCCCGAA.................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................TGTTACAGCATTTACAAGGACGG........................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GTTAAACCGCGGTTGTGTTAAGGTGCCC..................... 28 0 1 1.00 1 1 0 0 0 0
...............................................................................................GGTTGCAGCCTGTTACAGCAT....................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
........................................CTACAGCTTCTTCGCCATCTTCAAGTC........................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
......................................TTCTACAGCTTCTTCGCCATCTTCAAGTC........................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
..........................................................CTTCAAGTCCTTCACCTACTCCCCC........................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................CAACCGCGGTTGTGTTAAGGTGCCCGAA.................. 28 1 1 1.00 1 1 0 0 0 0
..................................................................................CAACAAAGTACAAGGTTGCAGCC.................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0
..................................................................CCTTCACCTACTCCCCCAACAAAGT................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................GTTACAGCATCTACAAGGACGGAGTGT...................................................................................................................... 27 3 1 1.00 1 0 0 1 0 0
............................................................................................................................................................................................................TAAACCGCGGTTGTGTTAAGGT......................... 22 0 1 1.00 1 0 0 0 0 1
........................................................................................................CTGTTACAGCATCTACAAGGACGGA.......................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.........................................................................................................TGTTACAGCATCTACAAGGACGGAGT........................................................................................................................ 26 1 1 1.00 1 0 0 1 0 0
.................ATCGTACGAATCTTCCACCAGT.................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GTTAAACCGCGGTTGTGT............................... 18 0 1 1.00 1 1 0 0 0 0
.............................................................................................................ACAGCATCTACAAGGACGGAGT........................................................................................................................ 22 1 1 1.00 1 0 0 0 0 1
...................CGTCCGAATCTTCCACCAGTT................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................................................CTTCAAGTCCTTCACCTACTCCCCCAAC..................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1
........................................................................................................................................................................................................................................AGAACAATCCGGCTGCCAG 19 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................GCGGTTGTGTTAAGGTGCC...................... 19 0 1 1.00 1 0 0 0 0 1
..TTCTACAGATTCTTCATCGTCC................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................GTTAAACCGCGGTTGTGTTAAG........................... 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................AAACCGCGGTTGTGTTAAGGTGCCC..................... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................CAAGGTTGCAGCCTGTTACAGC......................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................GGTTGTGTTAAGGTGCCCGAA.................. 21 0 1 1.00 1 0 0 1 0 0
..........................ATCTTCCACCAGTTCTACAGC............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................TACAAGGTTGCAGCCTGTTACAG.......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................CGCGGTTGTGTTAAGGTGCCCGAA.................. 24 0 1 1.00 1 0 1 0 0 0
...........................................................................................................TTACAGCATCTACAAGGACGGAGT........................................................................................................................ 24 1 1 1.00 1 0 0 1 0 0
.............................................................CAAGTCCTTCACCTACTCCCCCAA...................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.......................................................................................AAGTACAAGGTTGCAGCCT................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
.....................................................................................................TGCCTGTTACAGCATCTACA.................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
.................................................CTTCGCCATCTTCAAGTCCTTCACCT................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.........................AATCTTCCACCAGTTCTACAG............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................ACAGCATCTACAAGGACGG........................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
........................................CTACAGCTTCTTCGCCGTCTT.............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0
.........................................................................................................................................................................................................................................GAACAATCCGGCTGCCAG 18 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................CCGAAGAACAATCCGGCTGCC.. 21 0 1 1.00 1 1 0 0 0 0
.............CTTCATCGTCCGAATCTTCCACCAGTT................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0
.....................................................................................................................................................................................................................GTTGTGTTAAGGTGCCCGAAGA................ 22 0 1 1.00 1 0 0 1 0 0
........................................................................................AGTACAAGGTTGCAGCCTGTTAC............................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
.............................................................CAAGTCCTTCACCTACTCCCCCAACAAA.................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTTGTGTTAAGGTGCCCGAAGA................ 23 0 1 1.00 1 0 0 0 1 0
....................GTCCGAATCTTCCACCAGTTCTACAGCT........................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................GTGTTAAACCGCGGTTGT................................. 18 0 1 1.00 1 1 0 0 0 0
............................................AGCTTCTTCGCCATCTTCAAGTCCTT..................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................GTACAAGGTTGCAGCCTGTTACAGC......................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1
...................................................................................AACAAAGTACAAGGTTGCAGCCTGTT.............................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
.........................................................................................................TGTTACAGCATCTACAAGGACGGA.......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................AAACCGCGGTTGTGTTAAGGTGCCCGAA.................. 28 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................AAACCGCGGTTGTGTTAAGGT......................... 21 0 1 1.00 1 0 1 0 0 0
...................................................................................AACAAAGTACAAGGTTGC...................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
..............................................CTTCTTCGCCATCTTCAAGTCCTT..................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...........TTCTTCATCGTCCGAATCTTCCACCA...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....CTACACATTCATCATCGCCCGA................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 1 0
..................................................................................................................................GTGATCACAATGCTTTTTTT..................................................................................................... 20 2 2 0.50 1 0 0 0 1 0
......................................................................................................................................................................................................................TAGAGTTAAGGTGCCGGAA.................. 19 3 19 0.05 1 0 1 0 0 0
..................................................................................................................ATCTACAAGGACGGAGTGT...................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0
..................................CTAGTTCTAAAGCGTCTTC...................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CGAAGATGTCTAAGAAGTAGCAGGCTTAGAAGGTGGTCAAGATGTCGAAGAAGCGGTAGAAGTTCAGGAAGTGGATGAGGGGGTTGTTTCATGTTCCAACGTCGGACAATGTCGTAGATGTTCCTGCCTCCACTCGTGTTACAAAAAAAACCTTGAGTTAACAATAAGTTCTATAAGTAAAGTATAAAAAATTGGCTTGTCACAATTTGGCGCCAACACAATTCCACGGGCTTCTTGTTAGGCCGACGGTC
**************************************************************************************************************************........((((((...................(((..((((....))))..))).........))))))...******************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 V108
head
 V060
head
 V107
male body
.............................................................................AGGGGGTTGTTTCGTGTTCAG......................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
.......................................................................................................GCACAATGTCGTGGAAGTT................................................................................................................................. 19 3 15 0.20 3 0 2 0 1
......................................................................................................CGCACAATGTCGTGGAAGT.................................................................................................................................. 19 3 7 0.14 1 0 1 0 0
...........................................................................TAAGGTGGTTGTTTCATG.............................................................................................................................................................. 18 2 8 0.13 1 1 0 0 0
....................................................................................................................................................................................................................................GGCTTCTTGGTGGGCCGGC.... 19 3 11 0.09 1 0 0 1 0
....................................................................................................................................................................................................................................GGCTTCTTGTTGGGACGGC.... 19 3 18 0.06 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4929:17263644-17263894 + der_1342 GCTTCTA---------CAGA---------TTCTTCATCGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCTACAGCTTCTTCGCCATCTTCAAGTCCTTCACCTA-----------------------------CTCCCCCAACAAAGTACAAGGTTGCAGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACAAT------------G------TTTTTTTTGG---------------------------------------------------------------------------------------AACTCAATTGTTATTCAAGATAT------------------------------------------------------------------------TCATTTCATATT-TTT--------TA-ACCGAACAGTGTTAAACCGCGGTTGTGTTAAGGTGCCCGAAGAACAATCCGGCTGCCAG
droYak3 2L:10992738-10992994 + GCTTCTA---------CAAA---CACAGATTCGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACTGCTTCGCCATCTACAAGCCCA------T-----------------------------CACCCCCAACAAATTACAAGATTGCAGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACATA------------G------CGTTCTTTGG---------------------------------------------------------------------------------------AACTCGATTGTTGTTCAAGATAT------------------------------------------------------------------------TTTATAAAACAT-TTT--CTCTTTTG-ACCAAACAGTGTTAAATCGCGGCTGTGTTAAGGTGCCCGAAGAACAATCCGGCTGCCAG
droSec2 scaffold_3:3850113-3850364 + ACCGCCA---------CAGA---------TTCGTCGTCGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGACAACTTCTTCGCCACCCATAAGCACTTCACCTT-----------------------------CTCCCCCAACAAATTACAAGATTGCGGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACACG------------G------CATTATTTGG---------------------------------------------------------------------------------------AACTCGATTGTTATACAAGATAT------------------------------------------------------------------------TAAATATAAATG-TTT--CTCT------TTGACCAGTGTTAAACCGTGGGTGTGTTAAGGTGCCCGAAGAAGAATCCGGCTGCCAG
droSim2 2l:8081707-8081959 + ACCGCCA---------CAGA---------TTCGTCGTCGTCCGAATCTTCAACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGACAACTTCTTCGCCACCCATAAGCACTTCACCTT-----------------------------CTCCCCCAACAAATTACAAAATTGCGGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACACG------------G------CGTTATTTGG---------------------------------------------------------------------------------------AACTCGATTGTTATACAAGATAT------------------------------------------------------------------------TAAATTTAAATG-TTT--CTCTTT-----TGACCAGTGTTAAACCGTGGTTGTGTTAAGGTGCCCGAAGAAGTATCCGGCTGCCAG
dm3 chr2L:8354555-8354927 + GGTTCTT---------CCAC------------------GTCAGATTCTTCAAC---------CTCCGATTCTACAACAGATTCGTCGACTGCTTCCTCCACCACAATTGGAGATTCTAGCAGCAGCTCATTGGGTTCCTCAACGACAGATTCTTCGACTGTTTCCTCCACCACAAATGCAGGTTCAACCGCCAGTTCTACAACTTCTTCGCCATCCATAAGCACTTCAACTT-----------------------------CTTCCCCAACAAATTACAAGATTGCGGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACACG------------G------CGTTGTTTGG---------------------------------------------------------------------------------------AACTCGATTGTTATACAAGATTT------------------------------------------------------------------------TAAATTTAAATG-TTT--CTCTTT-----TGACCAGAGTTAAACCGTGGTTGTGTTAAGGTGCCCGAGAAACATTCCGGCTGCCAG
droEug1 scf7180000409461:369989-370235 + TCTTCTA---------CAGA---------CTCCTCGTCGTCAAGCTCTGGCAC---------CACCGATTCCACT---------------------------------------------------------------------------------TCCG---------------------------------------------------------AA---TCTACGACTT-----------------------------CTCCTCCCATAAGTTATAAGCTTGCCGCTTGCTACAGCATCTACAAGGATGGAGGTAATTACACG------------AACGA-AGATTGTTTGG---------------------------------------------------------------------------------------TCCT---TTTTTAAACAATTAT-------------------------------------------------------ATTGAACTAA------------CTTACACA-TTT--TCCT------TTTTACAGTGCTAAATCGAGGCTGTGTTAAGATTCCCAATGACGTAGGAGGCTGCCAG
droBia1 scf7180000301500:293933-294177 - ACCTCTT---------CTACAGC------TTCTTCTACAGGCACAGATTCTACAAGCCCTACCACTGATGCTACT---------------------------------------------------------------------------------ACTG---------------------------------------------------------ATGCCACCACCAATC-----------------------------CTCCTCCCGTGAGCTATAAGCTTGCCGCCTGCTACAGCATCTACAAGGACGGAGGTGAGCCCACA------------C------AAAG----------------------------------------------------------------------------------------------ATTTGTTTATTTAGCAAGAAAA------------------------------------------------------------------------CTAAACCCAACA-TTT-----------CCCCAACAGAGATAAACCGTGGCTGCGTTCAGGTGCCCGAAGGACAAGGTGCCTGCCAA
droTak1 scf7180000415629:51930-52208 + GGTTCTT---------CAAC---------ATCTTCTACGACCGAGTCTAGCTCAAGTTCTACTACCGATTCTACA---------------------------------------------------------------------------------AGCG---------------------------------------------------------TA---TCAACACCGT-----------------------------CTTCTCCTGTATCTTACAAGCTTGCCGCCTGCTACAGTATCTACAAAGACGGAGGTGAGTTCACACA----------G------CAATATATTT---------------------------------------------------------------------------------------AAAACAAAAAATT------------------------------TTA-AATATATTTTATGAAGTATTGA--------ATGTTACTAA------A-----CGAA-ACA-TTT-TCTCCATATCACACAACAGTTATAAACCGTGGCTGTGTCCAGGTGCCCGATGGTCAAAGTGGCTGCCAG
droEle1 scf7180000491338:529226-529488 - ACCGATT---------CCAC------------------GTCTGATTCTACAAGTG------------ATTCTACA---------------------------------------------------------------------------------ACCG---------------------------------------------------------AAATCACTACAATTT-----------------------------CTCCCCCTATTAGTTATAAGCTTGCCGCCTGCTACAGCGCCTATAAGGAAGGAGGTGAGTCTTTG------------T--------------------------------------------------------TTTAAT---------------------------------------------TC-------------------ACCTTAAAGCAAAAAGACGTATAGCTTACATTCAAAAGTTTAT-GGAACTAAAATGAAC---------------CAAT--T-TTTTTCATCT--TT-CCCAAAAAGTGATTTACCGTGGTTGTATTAAGGTGCCCACAAACGAATCAGCCTGCCAG
droRho1 scf7180000780102:158132-158435 - TCCAGTT---------CTA------------------CGTCCGACTCTACGACTGATTCTACGCCCAATAGTTCT---------------------------------------------------------------------------------CCCG---------------------------------------------------------TA---ACTACAATTT-----------------------------CTCCACCTATAAGTTATAAATTGGCAGCCTGTTACAGCATCTATAAGGAAGGAGGTAATTATTGG------------T--------------------------------------------------------TTCAATGCACAACACACACATATACCAATTGCCTATTAC----TTCAAAC---------------GAAAATCAAACCTAAT-------------ATCTAACATTATAAATTTATA-TAAATTTTATTTTAC---------------CTAT--T-ATTTCCCTTT--AT-CCAAAACAGAGCTCTACCGTGGTTGTATTAAGGTGCCCACAAACGAATCAGCCTGCGAG
droFic1 scf7180000454117:3958-4258 + GACTCTAGCAGTGAATCTAC------------------CACCAGTTCCTCA------------ACAGATTCCTCG---------------------------------------------------------------------------------ACCG------------------------------------------------------ATTCCAGCACCACATCTC-------CACCAACCACTG----------TTCCACCCACAAATTATAAACTTGCCGCCTGCTACAGCATCTACAAGGATGGAGGTAAGAAAAAT------------A------T------------------------------------------------------------------------ACCTGT--------ACTTGTTAAGAACTGAAAT---------------CAGTCACAAG-------------TTCATTCTTTAAAATAAGATA-TTAATTGAA-----CTGACTGACAACTA--CTTT--T-AATTCCGTTT--AA-TTCAAACAGTGCTAAACCGTGGTTGTGTTAAGGTGCCCGACGAAGAGTCTGGATGCCAG
droKik1 scf7180000302570:596139-596522 + GCTTCTT---------CCAC---------TTCCACTTCTACAGGCTCTCCCACTG------------AAGCTGCT------------CCTGC---------------CGTAAGTCGTCGCCGCCGTAGTCTGGCCGCCCAGGCCACGGATGTGCTCC--------TGCG------------------------GAACTACC------------------------GAATC--ATTGCCCGGAATCAAAGGGATACGGATGC----------CGTCATAAAGGTGGCTGCCTGCTATAGCATCATCACGCAGGGAGGTGAGTGTACA------------C------CGGAAATGATATCTCAAGAATTTAAGAAAGAAAGAAATAAAAACTTTTTTGTTAGC---------------------------------------------AT-------------------ACTTTTAAGCTTAATC--TTA-AATTTAAATTGTAAACTTTACA--AATTTAA--------T------C-----CGAT--A-TTTTTCCTTTAT-----TTCCCAGAAATCCACCGCGGTTGCATCCGTGTGCCCGAAGGCCAAAGCGCCTGCCAG
droAna3 scaffold_12916:5909827-5910055 - TCGTC-------------G----------------------------------------------------------------------------------------------------------ATCCTTAACCGCCCAGGCCGCCGATATGCTCC--------TGCA------------------------AAATTACC------------------------GCAAC--------CTGAACC---GGGATTTGGACAT----------CACATATAAGACGGCCGCCTGTTACAGCATCAACAAGGATGGAGGTGAGTTTTTC------------AATAAT------------------------------------------------------------------------------------------------------------TTAAACATGAAAC------------------------------------------------------------------------TATTCTATAATC-TTC--CTTA--TT-CCGATACAGAAACCTACCGTGGATGCATTAGGGTGCCCGTAGGACAATCTGGTTGCCAG
droBip1 scf7180000396568:933563-933795 + GCCGCCG---------TCGA---------TCCTTAACCGCCC-------------------------------------------------------------------------------------------------AAGCCGCCGATATCCTCC--------TCCA------------------------AAATTACC------------------------GCAAC--------CTGAACC---GGGATGTGGATGT----------CGAATATAAGACTGCAGCCTGTTACAGTATCAACAAGGATGGAGGTGAGTTCTTT------------GATAAC------------------------------------------------------------------------------------------------------------CTAAACCGGAAAC------------------------------------------------------------------------TATTCTTTAATT-TTT--CTTT--AT-CCATCACAGAAACCTACCGTGGCTGCATTAGAGTGCCCGTAGGACAATCCGGCTGCCAG
dp5 4_group3:7944969-7945243 + ACTGATT---------CCAC------------------TACCGATTCCGCAAGTC---------------------------------------------------------------GTAGGAAAACGTTGGCTGCTATGGCCACAGATGTTTTGC--------TCCA------------------------GAACTATC------------------------GCACC--ATTTCCCGTGCTCGAAGGGACACGGATGG----------TACTATTAAGTTGACTGCCTGCTACAGTATTATGATGGGTGAAGGTATGTAAAAACCACAGAACCACA------CGTAATTTTG---------------------------------------------------------------------------------------A----------------------------------------------------------------------------ACTGAAC-----CA----C---ATCTCC-C-TTT----TT--CA-TTCCTACAGTGAAACATCTCGGCTGTGTTCGGGTATCGAATGGTCAGAGTGGATGTGAG
droWil2 scf2_1100000004516:1515585-1515815 - GCTGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTGC--------TACA------------------------AAACTATC------------------------GTTCC--TATGCACGTTATAGACGTGATGCAGAAGG----------CCAAATACGAACCACTGCCTGCTACAGTATTGTGAAGGACAATGGTAGGAAATTA------------A---------TTAATAA---------------------------------------------------------------------------------------AAATTGTCTATCGCACAATATAT------------------------------------------------------------------------A--ATATTATCG-TTT--------TA-AATTTCCAGTGATTCAACGTGGTTGCATTCGTATTCCCTATGGAAAAGGTGGATGTGAA
droVir3 scaffold_12963:16126052-16126187 + GTCGCGC---------TCGC--------------CG-----------------------------------------------------------------------------------------CTCCCTGGCTGCCCAGGCGGCCGATCAGCTGA--------TACG------------------------CAACTATC------------------------GCTCC--TACGAGTTCAA-----CGGACG-----------CGCCACCAACTACCGTACAACGGCCTGCTACAGCATCGAAAAGGATGGCGGTGAGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCTTCTA---------CAGA---------TTCTTCATCGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCTACAGCTTCTTCGCCATCTTCAAGTCCTTCACCTA-----------------------------CTCCCCCAACAAAGTACAAGGTTGCAGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACAAT------------G------TTTTTTTTGG---------------------------------------------------------------------------------------AACTCAATTGTTATTCAAGATAT------------------------------------------------------------------------TCATTTCATATT-TTT--------TA-ACCGAACAGTGTTAAACCGCGGTTGTGTTAAGGTGCCCGAAGAACAATCCGGCTGCCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....CTA---------CAGA---------TTCTTCATCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0042001010
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2514.0041000300
.........................................................................................................................................................................................................GCTTCTTCGCCATCTTCAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................2113.0032100000
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2113.0031000200
............................................ATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0022000000
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................1912.0020000200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAACCGCGGTTGTGTTAAG...........................2412.0020000200
.........................................................................................................................................................................................................GCTTCTTCGCCATCTTCAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................2212.0022000000
....................................................................................................................................................................................................................................................................................ACAAGGTTGCAGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2312.0021001000
..TTCTA---------CAGA---------TTCTTCATCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020001010
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2312.0020001100
....CTA---------CAGA---------TTCTTCATCGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAACCGCGGTTGTGTTAAGGT.........................2612.0021000010
....................................................................................................................................................................................................................ATCTTCAAGTCCTTCACCTA-----------------------------CTCCCC....................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGAGTG..................................................................................................................................................................................................................................................................................................................2411.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAACCGCGGTTGTGT...............................2011.0010000100
.......................................................................................................................................................................................................................TTCAAGTCCTTCACCTA-----------------------------CTCCCC....................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACCGCGGTTGTGTTAAGGT.........................2311.0010000100
.................................................................................................................................................................................................GTTCTACAGCTTCTTCGCCATCTT......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................CTTCTTCGCCATCTTCAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................................................................TGTTACAGCATCTACAAGGACGG......................................................................................................................................................................................................................................................................................................................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCGGTTGTGTTAAGGTGCCCGAA..................2711.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAACCGCGGTTGTGTTAAGGTGCCC.....................2811.0011000000
........................................................................................................................................................................................................................................................................................GGTTGCAGCCTGTTACAGCAT..................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................CTACAGCTTCTTCGCCATCTTCAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..................................................................................................................................................................................................TTCTACAGCTTCTTCGCCATCTTCAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
......................................................................................................................................................................................................................CTTCAAGTCCTTCACCTA-----------------------------CTCCCCC...................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...........................................................................................................................................................................................................................................................................CAACAAAGTACAAGGTTGCAGCC.............................................................................................................................................................................................................................................................................................................................................2311.0010000010
..............................................................................................................................................................................................................................CCTTCACCTA-----------------------------CTCCCCCAACAAAGT...........................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGACGGAGTGT.................................................................................................................................................................................................................................................................................................................2711.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACCGCGGTTGTGTTAAGGT.........................2211.0010100000
.................................................................................................................................................................................................................................................................................................CTGTTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2511.0010000100
..................................................................................................................................................................................................................................................................................................TGTTACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2611.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAACCGCGGTTGTGT...............................1811.0011000000
......................................................................................................................................................................................................................................................................................................ACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2211.0010100000
.....................................CGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................................................CTTCAAGTCCTTCACCTA-----------------------------CTCCCCCAAC................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAATCCGGCTGCCAG1911.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTTGTGTTAAGGTGCC......................1911.0010100000
..TTCTA---------CAGA---------TTCTTCATCGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAACCGCGGTTGTGTTAAG...........................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGCGGTTGTGTTAAGGTGCCC.....................2511.0011000000
.....................................................................................................................................................................................................................................................................................CAAGGTTGCAGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2211.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGTGTTAAGGTGCCCGAA..................2111.0010000010
............................................ATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCTACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................................................................................................TACAAGGTTGCAGCCTGTTACAG.....................................................................................................................................................................................................................................................................................................................................2311.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGTTGTGTTAAGGTGCCCGAA..................2411.0010000100
....................................................................................................................................................................................................................................................................................................TTACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2411.0010000010
.........................................................................................................................................................................................................................CAAGTCCTTCACCTA-----------------------------CTCCCCCAA.................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
................................................................................................................................................................................................................................................................................AAGTACAAGGTTGCAGCCT............................................................................................................................................................................................................................................................................................................................................1911.0010000100
.............................................................................................................................................................................................................CTTCGCCATCTTCAAGTCCTTCACCT........................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...........................................AATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................................................................................................................................ACAGCATCTACAAGGACGG......................................................................................................................................................................................................................................................................................................................1911.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAATCCGGCTGCCAG1811.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAAGAACAATCCGGCTGCC..2111.0011000000
...............................CTTCATCGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTTAAGGTGCCCGAAGA................2211.0010000010
.................................................................................................................................................................................................................................................................................AGTACAAGGTTGCAGCCTGTTAC.......................................................................................................................................................................................................................................................................................................................................2311.0010000100
.........................................................................................................................................................................................................................CAAGTCCTTCACCTA-----------------------------CTCCCCCAACAAA.............................................................................................................................................................................................................................................................................................................................................................2811.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGTGTTAAGGTGCCCGAAGA................2311.0010001000
......................................GTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCTACAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAACCGCGGTTGT.................................1811.0011000000
........................................................................................................................................................................................................AGCTTCTTCGCCATCTTCAAGTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..................................................................................................................................................................................................................................................................................GTACAAGGTTGCAGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2511.0010100000
............................................................................................................................................................................................................................................................................AACAAAGTACAAGGTTGCAGCCTGTT.........................................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................................................................................................................................................................................................................................................TGTTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGCGGTTGTGTTAAGGTGCCCGAA..................2811.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGCGGTTGTGTTAAGGT.........................2111.0010000100
............................................................................................................................................................................................................................................................................AACAAAGTACAAGGTTGC.................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..........................................................................................................................................................................................................CTTCTTCGCCATCTTCAAGTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................TTCTTCATCGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...........................................................................................................................................................................................................................................................................................................ATCTACAAGGACGGAGTGT.................................................................................................................................................................................................................................................................................................................19200.0510000100
droYak3
GCTTCTA---------CAAA---CACAGATTCGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACTGCTTCGCCATCTACAAGCCCA------T-----------------------------CACCCCCAACAAATTACAAGATTGCAGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACATA------------G------CGTTCTTTGG---------------------------------------------------------------------------------------AACTCGATTGTTGTTCAAGATAT------------------------------------------------------------------------TTTATAAAACAT-TTT--CTCTTTTG-ACCAAACAGTGTTAAATCGCGGCTGTGTTAAGGTGCCCGAAGAACAATCCGGCTGCCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2315.00500000050000
....CTA---------CAAA---CACAGATTCGTCATCGTCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400000040000
....CTA---------CAAA---CACAGATTCGTCATCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00400000040000
.............................TTCGTCATCGTCTGAATCTTCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000000003
................................GTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00312000000000
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................1913.00301000020000
.CTTCTA---------CAAA---CACAGATTCGTCATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00210100000000
....................................................................................................................................................................................................................................................................................ACAAGATTGCAGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2312.00201100000000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2512.00200000020000
.................................................................................................................................................................................................................................................................................ATTACAAGATTGCAGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2612.00200100010000
.............................TTCGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00201000010000
.....................................................................................................................................................................................................................................................................................CAAGATTGCAGCCTGTTACAG.....................................................................................................................................................................................................................................................................................................................................2112.00201000010000
.................................................................................................................................................................................................GCTCTACAACTGCTTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2312.00200000020000
.........................................................................................................................................................................................................................................................................................ATTGCAGCCTGTTACAGCAT..................................................................................................................................................................................................................................................................................................................................2012.00202000000000
................CAAA---CACAGATTCGTCATCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
...........................GATTCGTCATCGTCTGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000
....................................................................................................................................................................................................CTACAACTGCTTCGCCATCTACAA...................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
....CTA---------CAAA---CACAGATTCGTCATCGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCGCGGCTGTGTTAAGGTGC.......................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAGTGT.................................................................................................................................................................................................................................................................................................................2141.00401000030000
.............................................TCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACTGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................................................................................................................................................................................................................ATCTACAAGCCCA------T-----------------------------CACCCC....................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..................AA---CACAGATTCGTCATCGTCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................CGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
....CTA---------CAAA---CACAGATTCGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......................................................................................................................................................................................................................CTACAAGCCCA------T-----------------------------CACCCCCAACA...............................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................................................TTACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2411.00100000010000
....CTA---------CAAA---CACAGATTCGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................CGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.........................CAGATTCGTCATCGTCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATCGCGGCTGTGT...............................1811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGCGGCTGTGTTAAGGTGCCC.....................2511.00101000000000
......................................................................................................................................................................................................................................................................................................ACAGCATCTACAAGGACGGAGTG..................................................................................................................................................................................................................................................................................................................2311.00101000000000
......A---------CAAA---CACAGATTCGTCATCGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................GATTGCAGCCTGTTACAGCATCT................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...................................................................................................................................................................................................................................................................................TACAAGATTGCAGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGTGCCCGAAGAACA.............1911.00101000000000
.CTTCTA---------CAAA---CACAGATTCGTCATCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
....CTA---------CAAA---CACAGATTCGTCATCGTCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................................................................................................................................................................................CAACTGCTTCGCCATCTACA....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
................................GTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................................................................................................................................................................................................................................................................................................TTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................CGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...........................................AATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................TGTTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAG....................................................................................................................................................................................................................................................................................................................1811.00100000010000
.................................................................................................................................................................................................................................................................................................CTGTTACAGCATCTACAAGGACGGAGTGT.................................................................................................................................................................................................................................................................................................................2911.00100000010000
.............................TTCGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.................................................CCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACTGCTTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................................................................................................................AGCCTGTTACAGCATCTACAAGGACG.......................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................CGTCATCGTCTGAATCTTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGGTGCCCGAAGAACAATCCGGCTG....2911.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAGGTGCCCGAAG.................1811.00101000000000
.................AAA---CACAGATTCGTCATCGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................AGATTCGTCATCGTCTGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................................................................................................................................................................................................................................................................................AAGATTGCAGCCTGTTACAG.....................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................................................................................................................................................................................................................................................................................................ACAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................CAGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2111.00100000010000
...TCTA---------CAAA---CACAGATTCGTCATCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.............................TTCGTCATCGTCTGAATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
......................................................................................................................................................................................................................CTACAAGCCCA------T-----------------------------CACCCCCAAC................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCGCGGCTGTGTTAAGGTG........................2311.00101000000000
.................................................................................................................................................................................................................................................................................................CTGTTACAGCATCTACAAG...........................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................CTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACTGCTTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................CATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................................TGCTTCGCCATCTACAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..................................CATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................................................................................................................................................................................................CTACAACTGCTTCGCCATCTACAAGCC................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
....CTA---------CAAA---CACAGATTCGTCATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................................................................................................................................................................................................................................AAATTACAAGATTGCAGCCTG...........................................................................................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................................AATTACAAGATTGCAGCCTGTTACAGCAT..................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..............................................CTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAGTG..................................................................................................................................................................................................................................................................................................................2021.00201000010000
........................................................................................................................................................................................................................................................................................................AGCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................CGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
...............................CGTCATCGTCTGAATCTTCCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAATCGCGGCTGTGTTAAGGT.........................2611.00101000000000
...TCTA---------CAAA---CACAGATTCGTCATCGTCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTGTTAAGGTGCCCGAA..................2111.00101000000000
.................AAA---CACAGATTCGTCATCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................TCGTCATCGTCTGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCGGCTGTGTTAAGGT.........................2011.00100000010000
....................................................................................................................................................................................................CTACAACTGCTTCGCCATC........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................CTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GCTCTACAACTGCTTCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAACAATCCGGCTGCCAG2211.00101000000000
..........................................................................................................................................................................................................................................................................................................CATCTACAAGGACGGAGTGT.................................................................................................................................................................................................................................................................................................................20150.20301000020000
...........................................................................................................................................................................................................................................................................................................ATCTACAAGGACGGAGTG..................................................................................................................................................................................................................................................................................................................18130.08100000010000
droSec2
ACCGCCA---------CAGA---------TTCGTCGTCGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGACAACTTCTTCGCCACCCATAAGCACTTCACCTT-----------------------------CTCCCCCAACAAATTACAAGATTGCGGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACACG------------G------CATTATTTGG---------------------------------------------------------------------------------------AACTCGATTGTTATACAAGATAT------------------------------------------------------------------------TAAATATAAATG-TTT--CTCT------TTGACCAGTGTTAAACCGTGGGTGTGTTAAGGTGCCCGAAGAAGAATCCGGCTGCCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAACCGTGGGTGT.................................1813.0030030
......A---------CAGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020020
.............................TTCGTCGTCGTCCGAATCTTCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
...............................................................................................................................................................................................................................................................................AAATTACAAGATTGCGGCCTG...........................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................................................................................................................................................................................................................................................................TACAAGATTGCGGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2411.0010010
............................................................................................................................................................................................................................................................................AACAAATTACAAGATTGCGGCCTGT..........................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTAAACCGTGGGTGT.................................1911.0010100
.................................................................................................................................................................................................................................................................................ATTACAAGATTGCGGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2611.0010010
.......................................................................................................................................................................................................................CATAAGCACTTCACCTT-----------------------------CTCCCCC...................................................................................................................................................................................................................................................................................................................................................................2411.0011000
....CCA---------CAGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................................................................ATTACAAGATTGCGGCCTGT..........................................................................................................................................................................................................................................................................................................................................2011.0010100
.....................................CGTCCGAATCTTCCACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAGT...................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAACCGTGGGTGTGTTAAGG..........................2511.0010010
.................AGA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................................................................................................................................................................................................................TTACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2211.0010100
..CGCCA---------CAGA---------TTCGTCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGAATCCGGCTGCCA.2111.0010100
........................................................................................................................................................................................................................................................................................GATTGCGGCCTGTTACAGCAT..................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................................ACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGACAACTTCTTCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.........................................................................................................................................................................................................ACTTCTTCGCCACCCATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.......................................................................................................................................................................................................................................................................................AGATTGCGGCCTGTTACAGCAT..................................................................................................................................................................................................................................................................................................................................2211.0011000
..................GA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................................................................................................................................................................................................AACAAATTACAAGATTGCGGCCT............................................................................................................................................................................................................................................................................................................................................2311.0010010
...GCCA---------CAGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................ATCTACAAGGACGGAGTG..................................................................................................................................................................................................................................................................................................................1860.1710010
droSim2
ACCGCCA---------CAGA---------TTCGTCGTCGTCCGAATCTTCAACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGACAACTTCTTCGCCACCCATAAGCACTTCACCTT-----------------------------CTCCCCCAACAAATTACAAAATTGCGGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACACG------------G------CGTTATTTGG---------------------------------------------------------------------------------------AACTCGATTGTTATACAAGATAT------------------------------------------------------------------------TAAATTTAAATG-TTT--CTCTTT-----TGACCAGTGTTAAACCGTGGTTGTGTTAAGGTGCCCGAAGAAGTATCCGGCTGCCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................GA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1919.00903600000000000000
.................AGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00400400000000000000
...GCCA---------CAGA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300300000000000000
......A---------CAGA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00301200000000000000
................CAGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00302100000000000000
...................A---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00301200000000000000
.....CA---------CAGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
..CGCCA---------CAGA---------TTCGTCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
...GCCA---------CAGA---------TTCGTCGTCGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGAC........................................................................................................................................................................................................................................................................................................................2012.00200110000000000000
...GCCA---------CAGA---------TTCGTCGTCGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..................................................................................................................................................................................................................................................................................................TGTTACAGCATCTACAAGGAC........................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGG.....................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...................................................................................................................................................................................................................................................................................TACAAAATTGCGGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
................CAGA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...........................................AATCTTCAACCA------------------------------------------------------------------------------------------------------------------------------------------GTTCGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
......................................................................................................................................................................................................................................................................................AAAATTGCGGCCTGTTACAGCATCTACA.............................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.................AGA---------TTCGTCGTCGTCCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................TTACAGCATCTACAAGGACGGG.....................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
......A---------CAGA---------TTCGTCGTCGTCCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGTATCCGGCTGCCG.2111.00100100000000000000
..CGCCA---------CAGA---------TTCGTCGTCGTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
ACCGCCA---------CAGA---------TTCGTCGTCGTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
................................................................................................................................................................................................................................................................................AATTACAAAATTGCGGCCTGTTA........................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.....CA---------CAGA---------TTCGTCGTCGTCCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
......A---------CAGA---------TTCGTCGTCGTCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
dm3
GGTTCTT---------CCAC------------------GTCAGATTCTTCAAC---------CTCCGATTCTACAACAGATTCGTCGACTGCTTCCTCCACCACAATTGGAGATTCTAGCAGCAGCTCATTGGGTTCCTCAACGACAGATTCTTCGACTGTTTCCTCCACCACAAATGCAGGTTCAACCGCCAGTTCTACAACTTCTTCGCCATCCATAAGCACTTCAACTT-----------------------------CTTCCCCAACAAATTACAAGATTGCGGCCTGTTACAGCATCTACAAGGACGGAGGTGAGCACACG------------G------CGTTGTTTGG---------------------------------------------------------------------------------------AACTCGATTGTTATACAAGATTT------------------------------------------------------------------------TAAATTTAAATG-TTT--CTCTTT-----TGACCAGAGTTAAACCGTGGTTGTGTTAAGGTGCCCGAGAAACATTCCGGCTGCCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...................................................................................................................................................................................................................................................................................TACAAGATTGCGGCCTGTTACAGCATC.................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000
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...............................................................................................................................................................................................................................................................................................................................GCACACG------------G------CGTTGTTTGG---------------------------------------------------------------------------------------AAC..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTAAGGTGCCCGAGA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................ATTCTAGCAGCAGCTCATTGGGTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................AGCATCTACAAGGACGGAGAG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
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.........................................................................................................................................CTCAACGACAGATTCTTCGACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TTCTAGCAGCAGCTCATTGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACCGTGGTTGTGTTAAG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................TT-----------------------------CTTCCCCAACAAATTACAAGATTGC.................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTAAACCGTGGTTGTGTT..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................AAGATTGCGGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TCCCCAACAAATTACAAGATTGCG................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCTACAAGGAC........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................GCTCATTGGGTTCCTCAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GGCCTGTTACAGCATCTACAAGGAC........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGTTGTGTTAAGGTGCCC.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTAAGGTGCCCGAGAAA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CTTCAACTT-----------------------------CTTCCCCAAC................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAACCGTGGTTGTGT...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................GTGAGCACACG------------G------CGTTGTTTG.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACAGCATCTACAAGGACGGA.....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGTGTTAAGGTGCCCGAA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TACAGCATCTACAAGGACGGAGAGT.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................AATTACAAGATTGCGGCCT............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GGCCTGTTACAGCATCTA...............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CAGTTCTACAACTTCTTCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................ATTACAAGATTGCGGCCT............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................CAGCATCTACAAGGACGGAG....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTGGTTGTGTTAAGGTGCCC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACCGTGGTTGTGTTAAGGTGC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................CATCCATAAGCACTTCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAACCGTGGTTGTGTTAAGG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................CTACAACAGATTCGTCGACTGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120010000000000000000000000003000010000000
.........................................................................................................ATTGGAGATTCTAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000022000000
......................................................................CTACAACAGATTCGTCGACTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.7870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000003000210000000
.........................................................................................................ATTGGAGATTCTAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.6740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000
........................................................................................................AATTGGAGATTCTAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.6740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010001000000000000000000000000010000000
................CCAC------------------GTCAGATTCTTCAAC---------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................AGATTCGTCGACTGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.6760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000100000000000000000000011000000
..............................................................................GATTCGTCGACTGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.5650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000010000000000
...............................................................................ATTCGTCGACTGCTTCCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.5650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000002000000
............................................................................CAGATTCGTCGACTGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.5650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000101000000
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..........................................GATTCTTCAAC---------CTCCGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................GTCAGATTCTTCAAC---------CTCCGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GTCAGATTCTTCAAC---------CTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................C------------------GTCAGATTCTTCAAC---------CTCCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T---------CCAC------------------GTCAGATTCTTCAAC---------CTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................TTCTTCAAC---------CTCCGATTCTACAACAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GACTGTTTCCTCCACCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAC------------------GTCAGATTCTTCAAC---------CTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................CTTCAAC---------CTCCGATTCTACAACAGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................ACAGATTCGTCGACTGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000110000000
......................................................................................GACTGCTTCCTCCACCACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TACAACAGATTCGTCGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.4040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000001000000
..................................................................................................CACCACAATTGGAGATTCTAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................CCAC------------------GTCAGATTCTTCAAC---------CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................CCACCACAATTGGAGATTCTAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................AATTGGAGATTCTAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
...........................................................................................................TGGAGATTCTAGCAGCAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................CAGATTCGTCGACTGCTTCCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000
.................CAC------------------GTCAGATTCTTCAAC---------CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AACAGATTCGTCGACTGCTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000
........................................................................................................AATTGGAGATTCTAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................CCACCACAATTGGAGATTCTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................CTACAACAGATTCGTCGACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010001000000
.........................................................................................................................................................................................................................................................................................................GCATCTACAAGGACGGAGAGT.................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................TGCTTCCTCCACCACAATTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ATTCGTCGACTGCTTCCTCCACCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
...............................................................................ATTCGTCGACTGCTTCCTCCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
........................................................................................CTGCTTCCTCCACCACAATTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTCTACAACAGATTCGTCGACTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000
.......................................................................TACAACAGATTCGTCGACTGCTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................AGATTCGTCGACTGCTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000
droEug1
TCTTCTA---------CAGA---------CTCCTCGTCGTCAAGCTCTGGCAC---------CACCGATTCCACT---------------------------------------------------------------------------------TCCG---------------------------------------------------------AA---TCTACGACTT-----------------------------CTCCTCCCATAAGTTATAAGCTTGCCGCTTGCTACAGCATCTACAAGGATGGAGGTAATTACACG------------AACGA-AGATTGTTTGG---------------------------------------------------------------------------------------TCCT---TTTTTAAACAATTAT-------------------------------------------------------ATTGAACTAA------------CTTACACA-TTT--TCCT------TTTTACAGTGCTAAATCGAGGCTGTGTTAAGATTCCCAATGACGTAGGAGGCTGCCAGSizeHit CountTotal NormTotal
No Reads
droBia1
ACCTCTT---------CTACAGC------TTCTTCTACAGGCACAGATTCTACAAGCCCTACCACTGATGCTACT---------------------------------------------------------------------------------ACTG---------------------------------------------------------ATGCCACCACCAATC-----------------------------CTCCTCCCGTGAGCTATAAGCTTGCCGCCTGCTACAGCATCTACAAGGACGGAGGTGAGCCCACA------------C------AAAG----------------------------------------------------------------------------------------------ATTTGTTTATTTAGCAAGAAAA------------------------------------------------------------------------CTAAACCCAACA-TTT-----------CCCCAACAGAGATAAACCGTGGCTGCGTTCAGGTGCCCGAAGGACAAGGTGCCTGCCAASizeHit CountTotal NormTotal
No Reads
droTak1
GGTTCTT---------CAAC---------ATCTTCTACGACCGAGTCTAGCTCAAGTTCTACTACCGATTCTACA---------------------------------------------------------------------------------AGCG---------------------------------------------------------TA---TCAACACCGT-----------------------------CTTCTCCTGTATCTTACAAGCTTGCCGCCTGCTACAGTATCTACAAAGACGGAGGTGAGTTCACACA----------G------CAATATATTT---------------------------------------------------------------------------------------AAAACAAAAAATT------------------------------TTA-AATATATTTTATGAAGTATTGA--------ATGTTACTAA------A-----CGAA-ACA-TTT-TCTCCATATCACACAACAGTTATAAACCGTGGCTGTGTCCAGGTGCCCGATGGTCAAAGTGGCTGCCAGSizeHit CountTotal NormTotal
No Reads
droEle1
ACCGATT---------CCAC------------------GTCTGATTCTACAAGTG------------ATTCTACA---------------------------------------------------------------------------------ACCG---------------------------------------------------------AAATCACTACAATTT-----------------------------CTCCCCCTATTAGTTATAAGCTTGCCGCCTGCTACAGCGCCTATAAGGAAGGAGGTGAGTCTTTG------------T--------------------------------------------------------TTTAAT---------------------------------------------TC-------------------ACCTTAAAGCAAAAAGACGTATAGCTTACATTCAAAAGTTTAT-GGAACTAAAATGAAC---------------CAAT--T-TTTTTCATCT--TT-CCCAAAAAGTGATTTACCGTGGTTGTATTAAGGTGCCCACAAACGAATCAGCCTGCCAGSizeHit CountTotal NormTotal
No Reads
droRho1
TCCAGTT---------CTA------------------CGTCCGACTCTACGACTGATTCTACGCCCAATAGTTCT---------------------------------------------------------------------------------CCCG---------------------------------------------------------TA---ACTACAATTT-----------------------------CTCCACCTATAAGTTATAAATTGGCAGCCTGTTACAGCATCTATAAGGAAGGAGGTAATTATTGG------------T--------------------------------------------------------TTCAATGCACAACACACACATATACCAATTGCCTATTAC----TTCAAAC---------------GAAAATCAAACCTAAT-------------ATCTAACATTATAAATTTATA-TAAATTTTATTTTAC---------------CTAT--T-ATTTCCCTTT--AT-CCAAAACAGAGCTCTACCGTGGTTGTATTAAGGTGCCCACAAACGAATCAGCCTGCGAGSizeHit CountTotal NormTotal
No Reads
droFic1
GACTCTAGCAGTGAATCTAC------------------CACCAGTTCCTCA------------ACAGATTCCTCG---------------------------------------------------------------------------------ACCG------------------------------------------------------ATTCCAGCACCACATCTC-------CACCAACCACTG----------TTCCACCCACAAATTATAAACTTGCCGCCTGCTACAGCATCTACAAGGATGGAGGTAAGAAAAAT------------A------T------------------------------------------------------------------------ACCTGT--------ACTTGTTAAGAACTGAAAT---------------CAGTCACAAG-------------TTCATTCTTTAAAATAAGATA-TTAATTGAA-----CTGACTGACAACTA--CTTT--T-AATTCCGTTT--AA-TTCAAACAGTGCTAAACCGTGGTTGTGTTAAGGTGCCCGACGAAGAGTCTGGATGCCAGSizeHit CountTotal NormTotal
No Reads
droKik1
GCTTCTT---------CCAC---------TTCCACTTCTACAGGCTCTCCCACTG------------AAGCTGCT------------CCTGC---------------CGTAAGTCGTCGCCGCCGTAGTCTGGCCGCCCAGGCCACGGATGTGCTCC--------TGCG------------------------GAACTACC------------------------GAATC--ATTGCCCGGAATCAAAGGGATACGGATGC----------CGTCATAAAGGTGGCTGCCTGCTATAGCATCATCACGCAGGGAGGTGAGTGTACA------------C------CGGAAATGATATCTCAAGAATTTAAGAAAGAAAGAAATAAAAACTTTTTTGTTAGC---------------------------------------------AT-------------------ACTTTTAAGCTTAATC--TTA-AATTTAAATTGTAAACTTTACA--AATTTAA--------T------C-----CGAT--A-TTTTTCCTTTAT-----TTCCCAGAAATCCACCGCGGTTGCATCCGTGTGCCCGAAGGCCAAAGCGCCTGCCAGSizeHit CountTotal NormTotal
No Reads
droAna3
TCGTC-------------G----------------------------------------------------------------------------------------------------------ATCCTTAACCGCCCAGGCCGCCGATATGCTCC--------TGCA------------------------AAATTACC------------------------GCAAC--------CTGAACC---GGGATTTGGACAT----------CACATATAAGACGGCCGCCTGTTACAGCATCAACAAGGATGGAGGTGAGTTTTTC------------AATAAT------------------------------------------------------------------------------------------------------------TTAAACATGAAAC------------------------------------------------------------------------TATTCTATAATC-TTC--CTTA--TT-CCGATACAGAAACCTACCGTGGATGCATTAGGGTGCCCGTAGGACAATCTGGTTGCCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................ATAAGACGGCCGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2315.005210110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTAGGGTGCCCGTAGGAC..............2313.003030000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGGGTGCCCGTAGGAC..............2113.003001020
....................................................................................................................................................................................................................................................................................ATAAGACGGCCGCCTGTTACAGCAT..................................................................................................................................................................................................................................................................................................................................2512.002200000
..................................................................................................................................................................................................................................................................................ATATAAGACGGCCGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2512.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATTAGGGTGCCCGTAGGAC..............2412.002200000
......................................................................................................................................................ATGCTCC--------TGCA------------------------AAATTACC------------------------GCAAC--------CT...............................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATTAGGGTGCCCGTAGGACAAT...........2711.001000010
..................G----------------------------------------------------------------------------------------------------------ATCCTTAACCGCCCAGGCCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTGCCCGTAGGACAAT...........2111.001100000
..............................................................................................................................................................................................................................................CTGAACC---GGGATTTGGAC............................................................................................................................................................................................................................................................................................................................................................................1811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGGGTGCCCGTAGGACAATCT.........2611.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGGGTGCCCGTAGGACAAT...........2411.001000010
...................................................................................................................................................................................................................................AAC--------CTGAACC---GGGATTTGGAC............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCGTGGATGCATTAGGGTGCCC.....................2511.001100000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCAACAAGGATGGAGAAA.................................................................................................................................................................................................................................................................................................................2711.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGCCCGTAGGACAATCT.........2111.001010000
................................................................................................................................................................................................................................................................................ACATATAAGACGGCCGCCTGTTACAGC....................................................................................................................................................................................................................................................................................................................................2711.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCGTGGATGCATTAGGGTGCCCGT...................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGGTGCCCGTAGGAC..............1911.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGGTGCCCGTAGGACAATCTGGT......2711.001000001
............................................................................................................................................................................................................................................................TTTGGACAT----------CACATATAAGACGGCC................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCGTGGATGCATTAGGGTGCC......................2411.001100000
..GTC-------------G----------------------------------------------------------------------------------------------------------ATCCTTAACCGCCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................................TGGACAT----------CACATATAAGACGGC.................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................GTTACAGCATCAACAAGGATGGAGAA..................................................................................................................................................................................................................................................................................................................2611.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGGGTGCCCGTAGGACA.............2211.001000010
.................................................................................................................................................................................................AAATTACC------------------------GCAAC--------CTGAACC---GGGAT..................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................GCAAC--------CTGAACC---GGGATTTGGAC............................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAGGGTGCCCGTAGGACAAT...........2311.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTAGGGTGCCCGTAGGACA.............2311.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATTAGGGTGCCCGTAGGACAA............2611.001000010
droBip1
GCCGCCG---------TCGA---------TCCTTAACCGCCC-------------------------------------------------------------------------------------------------AAGCCGCCGATATCCTCC--------TCCA------------------------AAATTACC------------------------GCAAC--------CTGAACC---GGGATGTGGATGT----------CGAATATAAGACTGCAGCCTGTTACAGTATCAACAAGGATGGAGGTGAGTTCTTT------------GATAAC------------------------------------------------------------------------------------------------------------CTAAACCGGAAAC------------------------------------------------------------------------TATTCTTTAATT-TTT--CTTT--AT-CCATCACAGAAACCTACCGTGGCTGCATTAGAGTGCCCGTAGGACAATCCGGCTGCCAGSizeHit CountTotal NormTotal
No Reads
dp5
ACTGATT---------CCAC------------------TACCGATTCCGCAAGTC---------------------------------------------------------------GTAGGAAAACGTTGGCTGCTATGGCCACAGATGTTTTGC--------TCCA------------------------GAACTATC------------------------GCACC--ATTTCCCGTGCTCGAAGGGACACGGATGG----------TACTATTAAGTTGACTGCCTGCTACAGTATTATGATGGGTGAAGGTATGTAAAAACCACAGAACCACA------CGTAATTTTG---------------------------------------------------------------------------------------A----------------------------------------------------------------------------ACTGAAC-----CA----C---ATCTCC-C-TTT----TT--CA-TTCCTACAGTGAAACATCTCGGCTGTGTTCGGGTATCGAATGGTCAGAGTGGATGTGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................AAAACGTTGGCTGCTATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030300000000
............................................................................................................................AAACGTTGGCTGCTATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020100100000
.................................................................................................................................................................................................................................................GCTCGAAGGGACACGGATG...........................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
...................................................AGTC---------------------------------------------------------------GTAGGAAAACGTTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................GATTCCGCAAGTC---------------------------------------------------------------GTAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................A------------------------GAACTATC------------------------GCACC--ATTTCCCGTGCTC..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCGAATGGTCAGAGTGGATGTGA.2611.0010100000000
..............................................................................................................................................................................................................................................CGTGCTCGAAGGGACACGGATGG----------T...............................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................................................GCTCGAAGGGACACGGATGG----------TACT............................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
......................................................................................................................................................GTTTTGC--------TCCA------------------------GAACTATC------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGTCAGAGTGGATGTGA.2011.0010100000000
.................................................................................................................................................................................................................................................GCTCGAAGGGACACGGATGG----------TA..............................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................................ATTTCCCGTGCTCGAAGGGA...................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................C---------------------------------------------------------------GTAGGAAAACGTTGGCTGCTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................................................................................ATTAAGTTGACTGCCTGCT.........................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......T---------CCAC------------------TACCGATTCCGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................TGCTCGAAGGGACACGGATGG----------TA..............................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................TACAGTATTATGATGGGTGAAGT...................................................................................................................................................................................................................................................................................................................2311.0010000100000
....................................................................................................................................................................................................................................................................G----------TACTATTAAGTTGACTGCCTGCTACA......................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCGGCTGTGTTCGGGT.........................2011.0010100000000
.....................................................................................................................................................................................................................................................................................TAAGTTGACTGCCTGCTACA......................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................CCGCAAGTC---------------------------------------------------------------GTAGGAAAACGTTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................................................................................................................................................................................................GCTCGAAGGGACACGGAT............................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................AGGAAAACGTTGGCTGCTATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................................................................................................................................CACAGATGTTTTGC--------TCCA------------------------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...................................................................................................................................................................................................ACTATC------------------------GCACC--ATTTCCCGT..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATGGTCAGAGTGGATGTGA.2211.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGCTGTGTTCGGGTATCGAAT..................2411.0010100000000
...............................................................................................................................................CACAGATGTTTTGC--------TCCA------------------------GAACTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................CCAC------------------TACCGATTCCGCAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
droWil2
GCTGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTGC--------TACA------------------------AAACTATC------------------------GTTCC--TATGCACGTTATAGACGTGATGCAGAAGG----------CCAAATACGAACCACTGCCTGCTACAGTATTGTGAAGGACAATGGTAGGAAATTA------------A---------TTAATAA---------------------------------------------------------------------------------------AAATTGTCTATCGCACAATATAT------------------------------------------------------------------------A--ATATTATCG-TTT--------TA-AATTTCCAGTGATTCAACGTGGTTGCATTCGTATTCCCTATGGAAAAGGTGGATGTGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCTATGGAAAAGGTGGAT.....2414.00401300
...............................................................................................................................................................................................................................................GTTATAGACGTGATGCAGAAGG----------CCAA............................................................................................................................................................................................................................................................................................................................................................2613.00300210
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATTCCCTATGGAAAAGGTGGAT.....2712.00202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTATGGAAAAGGTGGATGTG..2412.00200200
....................................................................................................................................................................................................................................CC--TATGCACGTTATAGACGT.....................................................................................................................................................................................................................................................................................................................................................................................2012.00200200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTCCCTATGGAAAAGGTGGAT.....2512.00200200
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCAACGTGGTTGCATTC.............................2112.00202000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCCTATGGAAAAGGTGGATGTGA.2711.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATTCCCTATGGAAAAGGTG........2411.00101000
..................................................................................................................................................................................................................................TTCC--TATGCACGTTATAGACGT.....................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.....................................................................................................................................................................................................................................C--TATGCACGTTATAGACGT.....................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.......................................................................................................................................................................................................................................................................................................CAGTATTGTGAAGGACAATGT...................................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................................................................................................................................................................................GTTATAGACGTGATGCAGAA............................................................................................................................................................................................................................................................................................................................................................................2011.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACGTGGTTGCATTCGT...........................2011.00100100
.............................................................................................................................................GCCACCGATCGATTGC--------TACA------------------------AAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
....................................................................................................................................................................................................CTATC------------------------GTTCC--TATGCACGTTATAGACGT.....................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.................................................................................................................................................................................................................................................................................................CTGCTACAGTATTGTGAAGGACAATGT...................................................................................................................................................................................................................................................................................................................2711.00100010
...................................................................................................................................................................................................................................................................................................GCTACAGTATTGTGAAGGACAATGT...................................................................................................................................................................................................................................................................................................................2511.00110000
.........................................................................................................................................................................................................................................................TGATGCAGAAGG----------CCAAATACGAAC....................................................................................................................................................................................................................................................................................................................................................2411.00100100
................................................................................................................................................................................................................................................TTATAGACGTGATGCAGAAGG----------CC..............................................................................................................................................................................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................................................................TACAGTATTGTGAAGGACAATGTG..................................................................................................................................................................................................................................................................................................................2411.00100100
.....................................................................................................................................................................................................................................................................................................TACAGTATTGTGAAGGAC........................................................................................................................................................................................................................................................................................................................1811.00110000
....................................................................................................................................................................................................................................................................................................CTACAGTATTGTGAAGGACAA......................................................................................................................................................................................................................................................................................................................2111.00100100
......A------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
....................................................................................................................................................................................................................................................................................................CTACAGTATTGTGAAGGACAATGTG..................................................................................................................................................................................................................................................................................................................2511.00100100
.....AA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTGC--------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..........................................................................................................................................................................................................................................................GATGCAGAAGG----------CCAAATACG.......................................................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTATGGAAAAGGTGGATGTGA.2411.00100100
...................................................................................................................................................................................................................................TCC--TATGCACGTTATAGACGT.....................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCTATGGAAAAGGTGG.......2211.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGTGGTTGCATTCGT...........................1911.00101000
.................................................................................................................................................................................................................................................TATAGACGTGATGCAGAAGG----------CC..............................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTATGGAAAAGGTGGATGT...2111.00100010
........................................................................................................................................................................................................................................................GTGATGCAGAAGG----------CCAAA...........................................................................................................................................................................................................................................................................................................................................................1811.00100100
......................................................................................................................................................................................................ATC------------------------GTTCC--TATGCACGTTATAGACGT.....................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTATGGAAAAGGTGGATGT...2211.00100100
.....AA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTGC--------TA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGTGGTTGCATTCGTA..........................2011.00100100
........................................................................................................................................................................................................................................................................................................AGTATTGTGAAGGACAATG....................................................................................................................................................................................................................................................................................................................1911.00100100
.CTGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTGC--------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTATTCCCTATGGAAAAGGTGGAT.....2811.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCTATGGAAAAGGTGGAT.....2211.00100100
..TGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTGC--------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAACGTGGTTGCATTCGT...........................2211.00101000
.CTGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...............................................................................................................................................................................................................................................GTTATAGACGTGATGCAGAAGG----------CC..............................................................................................................................................................................................................................................................................................................................................................2411.00101000
...................................................................................................................................................................................................................................................................................................GCTACAGTATTGTGAAGGACAAT.....................................................................................................................................................................................................................................................................................................................2311.00110000
....................................................................................................................................................................................................................................................................G----------CCAAATACGAACCACTGCCTGCT.........................................................................................................................................................................................................................................................................................................................................2411.00100010
..TGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...GCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................................................................................................................GTTATAGACGTGATGCAGA.............................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..........................................................................................................................................................................................................................................................GATGCAGAAGG----------CCAAATACGA......................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................................................................................................................................TACAGTATTGTGAAGGACAAT.....................................................................................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................CAGTATTGTGAAGGACAAT.....................................................................................................................................................................................................................................................................................................................1911.00101000
.....................................................................................................................................................................................................................................................GACGTGATGCAGAAGG----------CCAA............................................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTCGTATTCCCTATGGAAAAGGT.........2711.00100100
GCTGCAA------------------------------------------------------------------------------------------------------------------------------------GGGCCACCGATCGATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATTCCCTATGGAAAAGGT.........2311.00100100
...........................................................................................................................................................................................................................................................................................................ATTGTGAAGGACAATGTG..................................................................................................................................................................................................................................................................................................................18140.07100010
droVir3
GTCGCGC---------TCGC--------------CG-----------------------------------------------------------------------------------------CTCCCTGGCTGCCCAGGCGGCCGATCAGCTGA--------TACG------------------------CAACTATC------------------------GCTCC--TACGAGTTCAA-----CGGACG-----------CGCCACCAACTACCGTACAACGGCCTGCTACAGCATCGAAAAGGATGGCGGTGAGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................CCTGCTACAGCATCGAAAAGGATGGCGAG..................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................CCCAGGCGGCCGATCAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CGATCAGCTGA--------TACG------------------------CAACTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................GC--------------CG-----------------------------------------------------------------------------------------CTCCCTGGCTGCCCAGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................G-----------------------------------------------------------------------------------------CTCCCTGGCTGCCCAGGCGGCCGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CAA-----CGGACG-----------CGCCACCAACTACC........................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CC--TACGAGTTCAA-----CGGACG-----------CGCC..................................................................................................................................................................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TGGCTGCCCAGGCGGCCGATCAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TACAACGGCCTGCTACAGCATC.................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ATC------------------------GCTCC--TACGAGTTCAA-----CGGA...................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..................................CG-----------------------------------------------------------------------------------------CTCCCTGGCTGCCCAGGCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..CGCGC---------TCGC--------------CG-----------------------------------------------------------------------------------------CTCCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GA--------TACG------------------------CAACTATC------------------------GCTCC--TACGA..................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000

Generated: 05/17/2015 at 11:50 PM