ID:

der_1248

 Coordinate:

scaffold_4929:3105952-3106102 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.9

Flybase annnotation

CDS [Dere\GG24920-cds]; exon [dere_GLEANR_9601:1]; intron [Dere\GG24920-in]

No Repeatable elements found

Sense Strand Reads

-----------------------------------###############---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGCTCATGAACTTGAAGCGCCACTGCGAGATTCGATGTGGGTTCGGGATGTGAGTTTTCGGGCTGGGGCTGTGCTGACGCCTACAGGAGTACTTTGGGCCCCAATCGATGGCTGCGAGAATAGGGCCGAGTGCATAAACAAACAGTGTAGGGTGGAAAGGGGCGGGCTATGTTTGTCGCCCTTGTTTACCTATCCAATGACGCAACTTTCGCTATATGGCCTGATGATAGCAGAATCGATTGTGGGCGGG
************************************************************************************************************************.....(((.....(((..(((.....)))...)))......)))....*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 V108
head
 M055
female body
 V040
embryo
 M057
embryo
 V060
head
....................................................................................................................................................TAGGGTGGAAAGGGGCGGGC................................................................................... 20 0 1 48.00 48 21 17 7 2 0 1
.....................................................................................................................................................AGGGTGGAAAGGGGCGGGC................................................................................... 19 0 1 16.00 16 8 4 4 0 0 0
....................................................................................................................................................TAGGGTGGAAAGGGGCGGGCT.................................................................................. 21 0 1 5.00 5 1 4 0 0 0 0
.....................................................................................................................................................AGGGTGGAAAGGGGCGGG.................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................................TAGGGTGGAAAGGGGCGGGCC.................................................................................. 21 1 1 2.00 2 0 1 1 0 0 0
.....................................................................................................................................................AGGGTGGAAAGTGGCGGGC................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................................GCAACTTTCGCTATATGGCCTG........................... 22 0 1 1.00 1 0 0 0 0 1 0
........................................................................................................................ATAGGGCCGAGTGCATAAACAA............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................TAGGGTGGAAAGGGGCGGGAT.................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................AGGGTGGAAAGGGGCGGGA................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
............................................................................GACGCCTACAGGAGTACTTTGGG........................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................TATGGCCTGATGATAGCAGAATC............. 23 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................TGGAAAGGGGCGGGCTATGTTTGTCGC....................................................................... 27 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................CTAGGGTGGAAAGGGGCGGGC................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................GGGTGGAAAGGGGCGGGC................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................AGGGTGGAAATGGGCGGGC................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................AAACAGTGTAGGGTGGAAAGGG......................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................TAGGGTGGAAAGGGGCGGG.................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................AGGGTGGAAAGGGGCGGGCA.................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................ATCGATGGCTGCGAGAATAGGGC............................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0
....................................................................................................................................................TAGGTTGGAAAGGGGCGGGC................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
...................GCCACTGCGAGATTCGATGTG................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0
.................................CCATGTGGTTTCGGGTTGTG...................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1 0 0

Anti-sense strand reads

AACGAGTACTTGAACTTCGCGGTGACGCTCTAAGCTACACCCAAGCCCTACACTCAAAAGCCCGACCCCGACACGACTGCGGATGTCCTCATGAAACCCGGGGTTAGCTACCGACGCTCTTATCCCGGCTCACGTATTTGTTTGTCACATCCCACCTTTCCCCGCCCGATACAAACAGCGGGAACAAATGGATAGGTTACTGCGTTGAAAGCGATATACCGGACTACTATCGTCTTAGCTAACACCCGCCC
***********************************************************************************.....(((.....(((..(((.....)))...)))......)))....************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM1528801
follicle cells		 V040
embryo
........................GCGCTCTAGGCTACACCC................................................................................................................................................................................................................. 18 2 2 0.50 1 1 0
...................CGGTGGCTCTCTAAGCTAGA.................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4929:3105902-3106152 + der_1248 TTGCTCATGAACTTGAAG--------CGCCACTGCGAG---------------------------ATT-----C--------------------GATG-----------------TGGGTTCGGGATGTGAGTTT-------TCGGGCTGGGG-----CTGT----------------GCTGACGCCTACAGGAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGAGAATAGGGCCGAGTGCATAAACAAACAGTG--TAGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------CTATGTTTGTCGC-------------------CC-----------------TTGTTTACCTATCCAATGACGCAACTTTC-GCT-----------ATATGGCCTGATGAT------AGC---------------------------------------AGAATCGATTG------------T--GGGC----GGG
droYak3 2L:3054119-3054401 + TTGTTCATGAACTTGAAG--------CGTCACACCGAG---------------------------ATT-----C--------------------GTTG-----------------TGGGTTGGGGATGTGGGTTT-TGGGTTTGGGGCAGGGGCTGTGCTGT----------------GCTGACGCGTACAGAAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGAGAATGGAGCCGAGTGCATAAACAAACAGTG--TGGAGTG--------------------------GAAA--AG----GG--AGGG----------------------------CTATGTTTGTCGC-------------------CC-----------------GTGTTTACCTATCCAATGACGCAACTTTC-GCTATATGC----TATATGGCCTGATGAT------GGAG-------------------------------------GTAGATCGATTGCGGGCGGAGGCGG--GGGC----GGG
droSec2 scaffold_5:1215449-1215706 + TTGTTCATGAACTGGAAG--------CGTCACAGCCAG---------------------------ATT-----C--------------------GATGTGCT------GGGCTGG-------GGGATGTGGGT--------TTCGGGCGGGGG-----CTGT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGGGAATGGAGCCGAGTGCATAAACAAACACTGTTTAGAGTG--------------------------GAAA--GG----GG--AGGGA----G----------------------CTATGTTTGTCGC-------------------CC-----------------GTGTTTACATATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GGG
droSim2 2l:2937328-2937585 + TTGTTCATGAACTTGAAG--------CGTCACAGCCAC---------------------------ATT-----C--------------------GATGTGCT------GGGCTGT-------TGGATGTGGGT--------TTCGGGCGGGGG-----CTGT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGGGAATGGAACCGAGTGCATAAACAAACACAGTTTAGAGTG--------------------------GAAA--GG----GG--AGGGG----G----------------------CTATGTTTGTCGC-------------------CC-----------------GTGTTTACATATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GGG
dm3 chr2L:3058186-3058443 + TTGTTCATGAACTTGAAG--------CGTCACAGGCAG---------------------------ATT-----C--------------------GATTTGCT------GGGCTG--------GGGATGTGGGTTT-------TTGGGCGGGGG-----CTGT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGGGAATGGAACCGAGTGCATAAACAAACACAGTTTAGAGTG--------------------------GAAA--GG----GG--AGGGG----G----------------------CTATGTTTGTCAC-------------------CC-----------------GTGTTTACATATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GGG
droEug1 scf7180000409554:3034004-3034265 - TTGTTCATGAACTTGAGG--------CGTCACCA-GAG---------------------------TTC-----G--------------------GATTGTAT------G-------------GGGATGGGGGTGT-------T--GGGAGGGC-----CCGA----------------AGTGACGCGTACAAGAGTACT----TTGGG-----CG-----------------CCAATCGATAACTGTGAAAATAGAACTGAGTGCATAAATAAACAGTG--GAGAGTGCCCT-------------------ATAGATG--AGGGAGGG--AGGG------G---------------------TATTGTTTGTC-C-------------------CT-----------------GTGTTTACCTATCGGATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGAT--------------------------------------TGGATCGCTTT------------GG-AGGC-GGGCAG
droBia1 scf7180000302188:2112233-2112477 + GTGTTCGTGAACTTGAAG--------CGTCACCG-AAGGC--------------------GAAGATTT-----C--------------------GCTGGGCT------GGGC------------------------------------------------GC----------------GGGGACGCCTCGGGGAGTACTCTCTTCGGA---ACCC-----------------CCAATCGATGGCTGTGGCAATAGAGCCGAGTGCATGGGCAAACAGCG--TAGAGTGCCCC-------------------ACCTATA--G-----------GG------GCAC----------------TGTGCTGTTTGTC-C-------------------CC-----------------GTGTTTACCCATCCAATGACGCAACTTTC-GCG-----------ATATGGCCTGATGAT------GGA---------------------------------------CGGATCGATGG------------G--GGGC----GGG
droTak1 scf7180000415438:763330-763597 - TTGTTCATGAACTTGAAG--------CGTCACCC-GAG---------------------------TTT-----C--------------------GATGGTGT------GGGCGAT-------CCG--ATGAGT-----------GGGGAGGGC-----CTGT----------------AGTGACGCGTACAGGAGTACTCT--TTGGG-----AC-----------------CCAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAATG--TAGAGTGCCCT-------------------GTGGAAA--AG----GG--AGGGGTGTGGGTAT----------------TGTATTGTTTGTC-C-------------------CC-----------------GTGTTTACCTATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGA----GGG
droEle1 scf7180000491046:1748338-1748609 + TCGTCCATGAACTTGAAG--------CGTCACCA-AAG---------------------------TTT-----C--------------------GATAGAGT------GTGGTGG-------GGGAGTATAGT--------TT--GGAAGAGC-----CTGT----------------AGTGACGCGTACACGTGTACT----TGATG-----CC-----------------CCAATCGATAACTGTGACAATAGAACCGAGTGCATAAATAAACAGTG--TTGAGTGTTCT-------------------ATGGAAA--AGTGTTGG--AGGG------GTGT----------------TGTGTTGTTTGTCTC-------------------CC-----------------ATGTTTACCTAGCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GATTGAGGGGG
droRho1 scf7180000780028:147945-148203 + TCGTTCATGAACTTGAAG--------CGTCACCA-AAG---------------------------CTT-----A--------------------GATGGAGT------G-----G-------GGGAGGTTAGT-----------GAGGGGAGT-----CTGT----------------TGTTTCGCGTACACGTGTACT----TGATG-----CC-----------------CCAATCGATAACTGTGAAAATAAAACCAAGTGCAAAAATAAACAATG--TAGAGTGCCCT-------------------ATGTAAA--AG----GG--AGGG------GTAC----------------TGTTTTGTTTGTCCT-------------------CC-----------------GTGTTTACCTATCCAGTGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GATT-G--GGG
droFic1 scf7180000453924:1039925-1040161 + TCATCCATGAACTTGAAG--------CGTCACAA-AAG---------------------------TTT-----G--------------------GATA-----------------TGGGTGGGGGAGTAGGGAA-CT-------------------------------------------------------GGGTACT----TGAGG-----AC-----------------CCAATCGATTACTGTGAAAATAGAACCGAGTGCATAAATAAACAGTGTGTTGAGTGCCCT-------------------GTGAAAA-TAA----GGG-AGGG------GTAT------------------TGATGTTTGCC-T-------------------CA-----------------TTGTTTACCTATCCAATGACGCAACTTTT-GCA-----------ATATGGCCTGATGAT------GGAT--------------------------------------TGGATCGACCG------------A--TATT----GGG
droKik1 scf7180000302246:264355-264647 + GCGCCCATGAACTTGAAGTGGTGCGTCGTCACCGGC----------------------CC-----A--TAGTGGG---------------------------------------------------------------------------CGG-----TGGT----------------GATGACGCGTACACGTGTACT----TGGGGC-CCTCC-----------------CTAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAGTG--TAAAGTGCCCGGTGCC------------CTGTGGAAAATAG----GGAGAAGGG----G--------------------T-TAATGTTTGCTGATTTGTATGTATGTGTATGTACATGTGGGTGTTTGTGTTTTGTTTGCCTTTCCAATGACGCAACTTTG-GCA-----------ATATGGCCTGATGAT------AAATGA-------------------------------ATAGATGGATCGATTG------------G-------------
droAna3 scaffold_12916:9597919-9598217 - ATGTTCATGAACTTGAAT--------CGTCACCA-GCG-CGGATTGGAG----------------GAT-----T--------------------GATG-----------------AGAGATGGGGA----------------------GCAGC-----CTGCAGTTGCCTGAGTCCGGAGCCCTGAGTCCACGTGTACT----TAAGAGGTGTCC-----------------ACAATCGATAGCTGCTAAAATAGAACCTCGTGCATAAATAAACATTG--TAAAGTGCCAT-------------------CCAAAAT--AG----GG--AC-----TAGGTACTGGCTACGAGGGGGAGCGCTTTGTTTAC--A-------------------AT-----------------GTGTTTGCTTATCCAATGACGCAATTTTC-GCA-----------ATATGGCCTGATGAT------G-AT-----------------------------------GGGTAGGTCGGTTG------------ACATAT--A--GCC
droBip1 scf7180000396580:1433175-1433431 + TTGCTCATGAACTTGAAT--------CGTCACCA-AACGCGGATTGGAGGATCGCAGCCG-----A------------------------------------------------------------------T-----------GGCGAGAGT-----CTGC----------------GGTGACGCGTCCACGTGTACT----TAAGAGGTGTCC-----------------ACAATCGATAGCTGCGAAAATAGAACCTCGTGCATAAATAAACATTG--TAAAGTGCCAT-------------------CTAGAAT--AG----GG--CGGG----------------------GGAGC----GTTTTGT--T-------------------AT-----------------GTGTTTGCTTATCCAATGACGCAATTTTC-GCA-----------ATATGGCCTGATGAT------G-A---------------------------------------TGGCTCGATTG------------ACATAT--A--GCC
dp5 4_group3:7175515-7175867 - GTCTCCA------------------------CC-------------------------CCAAAAGTTTTAGTGGGTGAGATGAGAATGAGGGCTAATTATATGTAGATGGATAGA-------------TGGGTG-CTGGGTGCTGTATATAGGGTGC-A----------------TAGAGGTTCCAGTACACGTGCACT----TGAGTC-TCTGCCTTGCCCCACCCTGGCCAAAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAATA--TAGAGTGCCCC-------TACCCGGATTCTAGGGAAG--GG------------------ACACT------GAGGAGGGGT----GGTTTGTT-T-------------------AC-----------------ATGTTTGCTTATCTAATGACGCAATTTTTAGCA-----------GTATGGCCTGATGAT------GGGTGACACCCACACACATATGTACATACATACACGAA-------------------CACAGA-GA--TAGT----GGA
droPer2 scaffold_1:8622926-8623285 - TCGTCT----------------------CCACC-------------------------CCAAAAGTTTTAGTGGGTGAGATGAGAATGAGGGCTAATTATATGTAGATGGATAGA-------------TGGGTG-CTGGGTGCTGGATATAGGGTGT-A----------------TAGAGGTTCCAGTACACGTGCACT----TGAGTC-TCTGCCTTGCCCCACCCTGGCCAAAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAATA--TAGAGTGCCCAAGACCCCTACCCCGATTCTAGGGAAG--GG------------------ACACT------GAGGAGGGGT----GGTTTGTT-T-------------------AC-----------------ATGTTTGCTTATCTAATGACGCAATTTTTAGCA-----------GTATGGCCTGATGAT------GGGTGACACCCACACACACAC--ATATACATACACGAA-------------------CACAGA-GA--TAGT----GGA
droWil2 scf2_1100000004945:396383-396533 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-----------------ATAATCAATAACTGTGAAAATAGAATTGAGTGCATAAATAAACAATG--TAAAGTGCCTT---------CCCCAATTT-------------------------------------------------------AAACAGTT-T-------------------AC-----------------ACATTTGTTTATCCAATGACGCAATTTTC-GCAAAAAAAAAAAAATGTGGCCTGATGGCAAGAGTGGGTGAC------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TTGCTCATGAACTTGAAG--------CGCCACTGCGAG---------------------------ATT-----C--------------------GATG-----------------TGGGTTCGGGATGTGAGTTT-------TCGGGCTGGGG-----CTGT----------------GCTGACGCCTACAGGAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGAGAATAGGGCCGAGTGCATAAACAAACAGTG--TAGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------CTATGTTTGTCGC-------------------CC-----------------TTGTTTACCTATCCAATGACGCAACTTTC-GCT-----------ATATGGCCTGATGAT------AGC---------------------------------------AGAATCGATTG------------T--GGGC----GGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................TAGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------C..................................................................................................................................................................................................20148.0048701221170
..........................................................................................................................................................................................................................................................................................AGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------C..................................................................................................................................................................................................19116.00164000840
.........................................................................................................................................................................................................................................................................................TAGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------CT.................................................................................................................................................................................................2115.0050000140
..........................................................................................................................................................................................................................................................................................AGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------...................................................................................................................................................................................................1812.0020000200
.........................................................................................................................................................................................................................................................................................TAGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------CC.................................................................................................................................................................................................2112.0021000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTC-GCT-----------ATATGGCCTG..........................................................................................2211.0010100000
...........................................................................................................................................................................................................................................................ATAGGGCCGAGTGCATAAACAA............................................................................................................................................................................................................................................................................................2211.0010000100
..........................................................................................................................................................................................................................................................................................AGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------A..................................................................................................................................................................................................1911.0010000010
.....................................................................................................................................................................................GACGCCTACAGGAGTACT----TTGGG-----........................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCCTGATGAT------AGC---------------------------------------AGAATC...............................2311.0010000010
..............................................................................................................................................................................................................................................................................................TG--------------------------GAAA--GG----GG--CGGG----------------------------CTATGTTTGTCGC-------------------...................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................................................................................GGGTG--------------------------GAAA--GG----GG--CGGG----------------------------C..................................................................................................................................................................................................1811.0010000100
...............................................................................................................................................................................................................................................................................AAACAGTG--TAGGGTG--------------------------GAAA--GG----G......................................................................................................................................................................................................................................2211.0010001000
.........................................................................................................................................................................................................................................................................................TAGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------...................................................................................................................................................................................................1911.0011000000
..........................................................................................................................................................................................................................................................................................AGGGTG--------------------------GAAA--GG----GG--CGGG----------------------------CA.................................................................................................................................................................................................2011.0011000000
...........................................................................................................................................................................................................................................ATCGATGGCTGCGAGAATAGGGC...........................................................................................................................................................................................................................................................................................................2311.0010100000
...........................GCCACTGCGAG---------------------------ATT-----C--------------------GATG-----------------TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TTGTTCATGAACTTGAAG--------CGTCACACCGAG---------------------------ATT-----C--------------------GTTG-----------------TGGGTTGGGGATGTGGGTTT-TGGGTTTGGGGCAGGGGCTGTGCTGT----------------GCTGACGCGTACAGAAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGAGAATGGAGCCGAGTGCATAAACAAACAGTG--TGGAGTG--------------------------GAAA--AG----GG--AGGG----------------------------CTATGTTTGTCGC-------------------CC-----------------GTGTTTACCTATCCAATGACGCAACTTTC-GCTATATGC----TATATGGCCTGATGAT------GGAG-------------------------------------GTAGATCGATTGCGGGCGGAGGCGG--GGGC----GGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................G--TGGAGTG--------------------------GAAA--AG----GG--AGGG----------------------------CTAAAA.............................................................................................................................................................................................2611.00101000000000
......................................................................................................................................................................................................................................................................................G--TGGAGTG--------------------------GAAA--AG----GG--AGGG----------------------------C..................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................GCTGTGCTGT----------------GCTGACGCGTAC...............................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.........................................................................................................................................................................................................................................CAATCGATGGCTGCGAGAATGGAG............................................................................................................................................................................................................................................................................................................2411.00100100000000
....................................................................................................................................TTT-TGGGTTTGGGGCAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................19120.08100000100000
droSec2
TTGTTCATGAACTGGAAG--------CGTCACAGCCAG---------------------------ATT-----C--------------------GATGTGCT------GGGCTGG-------GGGATGTGGGT--------TTCGGGCGGGGG-----CTGT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGGGAATGGAGCCGAGTGCATAAACAAACACTGTTTAGAGTG--------------------------GAAA--GG----GG--AGGGA----G----------------------CTATGTTTGTCGC-------------------CC-----------------GTGTTTACATATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................AGTG--------------------------GAAA--GG----GG--AGGGA----G----------------------...................................................................................................................................................................................................1811.0011000
.................................GCCAG---------------------------ATT-----C--------------------GATGTGCT------GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.................................................................ATT-----C--------------------GATGTGCT------GGGCTGG-------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................T-----C--------------------GATGTGCT------GGGCTGG-------GGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................TGG-------GGGATGTGGGT--------TTCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................................................................................................................................................................................................................................................TGCGGGAATGGAGCCGAGTGC....................................................................................................................................................................................................................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................AA--GG----GG--AGGGA----G----------------------CTATGTTTGTCGC-------------------C..................................................................................................................................................................2611.0010100
.................................................................................................................GG-------GGGATGTGGGT--------TTCGGGCGGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
droSim2
TTGTTCATGAACTTGAAG--------CGTCACAGCCAC---------------------------ATT-----C--------------------GATGTGCT------GGGCTGT-------TGGATGTGGGT--------TTCGGGCGGGGG-----CTGT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGGGAATGGAACCGAGTGCATAAACAAACACAGTTTAGAGTG--------------------------GAAA--GG----GG--AGGGG----G----------------------CTATGTTTGTCGC-------------------CC-----------------GTGTTTACATATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................CGGGGG-----CTGT----------------GCTGACGCGTACA..............................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
.............................................................................................................................................................................................CAGCAGTACT----TTGGG-----CC-----------------CCAA.................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................TATGTTTGTCGC-------------------CC-----------------GTGTTTA.........................................................................................................................................2111.00100000000010000000
................................................................................................................................................................................................................................................................................................................................GG----GG--AGGGG----G----------------------CTATA..............................................................................................................................................................................................15170.06100000000001000000
.................................................................................................................GT-------TGGATGTGGGT--------TA..............................................................................................................................................................................................................................................................................................................................................................................................................................15180.06100000000100000000
dm3
TTGTTCATGAACTTGAAG--------CGTCACAGGCAG---------------------------ATT-----C--------------------GATTTGCT------GGGCTG--------GGGATGTGGGTTT-------TTGGGCGGGGG-----CTGT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----CC-----------------CCAATCGATGGCTGCGGGAATGGAACCGAGTGCATAAACAAACACAGTTTAGAGTG--------------------------GAAA--GG----GG--AGGGG----G----------------------CTATGTTTGTCAC-------------------CC-----------------GTGTTTACATATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................CT------GGGCTG--------GGGATGTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000310000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAT------GGA---------------------------------------TGGATCGATTG------------..............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCAG---------------------------ATT-----C--------------------GATTTGCT------GGGCTG--------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CT------GGGCTG--------GGGATGTGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000001000
............................................................................................................................GATGTGGGTTT-------TTGGGCGGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAG--------CGTCACAGGCAG---------------------------ATT-----C--------------------GATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCGGGAATGGAACCGAGTGCA...................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGATGAT------GGA---------------------------------------TGGAT................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................T------GGGCTG--------GGGATGTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................ATTTGCT------GGGCTG--------GGGATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GGA---------------------------------------TGGATCGATTG------------G--GGGC----...2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTGAAG--------CGTCACAGGCAG---------------------------ATT-----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................GTGGGTTT-------TTGGGCGGGGG-----...............................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000
....................................................................................................CT------GGGCTG--------GGGATGTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000
.....................................G---------------------------ATT-----C--------------------GATTTGCT------GGGCTG--------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................GGATGTGGGTTT-------TTGGGCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000
...........................................................................................................................................................................................................TTGGG-----CC-----------------CCAATCGATGGCTG.......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GTTTGTCAC-------------------CC-----------------GTGTTTACA.......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACAGTTTAGAGTG--------------------------GAAA--GG----GG--...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................GCTG--------GGGATGTGGGTTT-------TTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATC...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................TGCGGGAATGGAACCGAGTG.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................G---------------------------ATT-----C--------------------GATTTGCT------GGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TAAACAAACACAGTTTAGAGT..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTGCT------GGGCTG--------GGGATGTGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................TTGCT------GGGCTG--------GGGATGTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................................................................................................................................................................................................GGCTGCGGGAATGGAACCGAG.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................CT------GGGCTG--------GGGATGTGGGTTT-------TTGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........ACTTGAAG--------CGTCACAGGCAG---------------------------AT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................G--------GGGATGTGGGTTT-------TTGGGCGGGGT-----...............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGCCTGATGAT------GGA---------------------------------------TGG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTAGAGTG--------------------------GAAA--GG----GG--AGGGG----G----------------------CTA................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCTGCGGGAATGGAACCGAGT......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GGGATGTGGGTTT-------TTGGGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................GGGG-----CTGT----------------GCTGACGCGTACA..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CACAGTTTAGAGTG--------------------------GAAA--GG----GG--A..................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................TGCGGGAATGGAACCGAGTGC....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............................................................................................ATTTGCT------GGGCTG--------GGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................GATGGCTGCGGGAATGGAACCGAGTGC....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................AAACAAACACAGTTTAGAGTG--------------------------...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GGA---------------------------------------TGGATCGATTG------------G--GGGC----GG.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..........................................................................................................................................................................................................................................AATCGATGGCTGCGGGAATGG..............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAACTTGAAG--------CGTCACAGGCAG---------------------------ATT-----C--------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................................................................AACCGAGTGCATAAACAAACACA.......................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TGTGGGTTT-------TTGGGCGGGGG-----...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-GCA-----------ATATGGCCTGATGAT------G..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAT------GGA---------------------------------------TGGATCGATTG------------G--...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................AGGCAG---------------------------ATT-----C--------------------GATTTGCT------GGGCTG--------GGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAT------GGA---------------------------------------TGGATCGATTG------------G--G..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------------------------TGGATCGATTG------------G--GGGC----GGG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.................................................................................................TTGCT------GGGCTG--------GGGATGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAT------GGA---------------------------------------TGGATCGATTG------------G--...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................TT-------TTGGGCGGGGG-----CTGT----------------GCTGA......................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTCAC-------------------CC-----------------GTGTTTACATATCC..................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GGGGG-----CTGT----------------GCTGACGCGTACAGCAG..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--G..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................T------GGGCTG--------GGGATGTGGGTTT-------TTG............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CTATGTTTGTCAC-------------------CC-----------------GTGTTT..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------GGA---------------------------------------TGGATCGATTG------------G--G..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................................................................................................................CAATCGATGGCTGCGGGAATG...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................ATT-----C--------------------GATTTGCT------GGGCTG--------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTTTAGAGTG--------------------------GAAA--GG----GG--A..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................GCTG--------GGGATGTGGGTTT-------TTGGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................GATGGCTGCGGGAATGGAACCGAG.......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................ATT-----C--------------------GATTTGCT------GGGCTG--------GGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................GTTT-------TTGGGCGGGGG-----CTGT----------------GCT........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................C--------------------GATTTGCT------GGGCTG--------GGGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GTCAC-------------------CC-----------------GTGTTTACATATC...................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACAGTTTAGAGTG--------------------------GAAA--GG----GT--...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATGGCTGCGGGAATGGAACCGAGTGC....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT------GGA---------------------------------------TGGATCGATTG------------G--GG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................ATT-----C--------------------GATTTGCT------GGGCTG--------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TT-----C--------------------GATTTGCT------GGGCTG--------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................................................................................................................................................................................................................................CACAGTTTAGAGTG--------------------------GAAA--GG----GG--...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................GT----------------GCTGACGCGTACAGCAGTACT----TTGGG-----C.......................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TTGTTCATGAACTTGAGG--------CGTCACCA-GAG---------------------------TTC-----G--------------------GATTGTAT------G-------------GGGATGGGGGTGT-------T--GGGAGGGC-----CCGA----------------AGTGACGCGTACAAGAGTACT----TTGGG-----CG-----------------CCAATCGATAACTGTGAAAATAGAACTGAGTGCATAAATAAACAGTG--GAGAGTGCCCT-------------------ATAGATG--AGGGAGGG--AGGG------G---------------------TATTGTTTGTC-C-------------------CT-----------------GTGTTTACCTATCGGATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGAT--------------------------------------TGGATCGCTTT------------GG-AGGC-GGGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTGTTCGTGAACTTGAAG--------CGTCACCG-AAGGC--------------------GAAGATTT-----C--------------------GCTGGGCT------GGGC------------------------------------------------GC----------------GGGGACGCCTCGGGGAGTACTCTCTTCGGA---ACCC-----------------CCAATCGATGGCTGTGGCAATAGAGCCGAGTGCATGGGCAAACAGCG--TAGAGTGCCCC-------------------ACCTATA--G-----------GG------GCAC----------------TGTGCTGTTTGTC-C-------------------CC-----------------GTGTTTACCCATCCAATGACGCAACTTTC-GCG-----------ATATGGCCTGATGAT------GGA---------------------------------------CGGATCGATGG------------G--GGGC----GGGSizeHit CountTotal NormTotal
No Reads
droTak1
TTGTTCATGAACTTGAAG--------CGTCACCC-GAG---------------------------TTT-----C--------------------GATGGTGT------GGGCGAT-------CCG--ATGAGT-----------GGGGAGGGC-----CTGT----------------AGTGACGCGTACAGGAGTACTCT--TTGGG-----AC-----------------CCAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAATG--TAGAGTGCCCT-------------------GTGGAAA--AG----GG--AGGGGTGTGGGTAT----------------TGTATTGTTTGTC-C-------------------CC-----------------GTGTTTACCTATCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GGGA----GGGSizeHit CountTotal NormTotal
No Reads
droEle1
TCGTCCATGAACTTGAAG--------CGTCACCA-AAG---------------------------TTT-----C--------------------GATAGAGT------GTGGTGG-------GGGAGTATAGT--------TT--GGAAGAGC-----CTGT----------------AGTGACGCGTACACGTGTACT----TGATG-----CC-----------------CCAATCGATAACTGTGACAATAGAACCGAGTGCATAAATAAACAGTG--TTGAGTGTTCT-------------------ATGGAAA--AGTGTTGG--AGGG------GTGT----------------TGTGTTGTTTGTCTC-------------------CC-----------------ATGTTTACCTAGCCAATGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GATTGAGGGGGSizeHit CountTotal NormTotal
No Reads
droRho1
TCGTTCATGAACTTGAAG--------CGTCACCA-AAG---------------------------CTT-----A--------------------GATGGAGT------G-----G-------GGGAGGTTAGT-----------GAGGGGAGT-----CTGT----------------TGTTTCGCGTACACGTGTACT----TGATG-----CC-----------------CCAATCGATAACTGTGAAAATAAAACCAAGTGCAAAAATAAACAATG--TAGAGTGCCCT-------------------ATGTAAA--AG----GG--AGGG------GTAC----------------TGTTTTGTTTGTCCT-------------------CC-----------------GTGTTTACCTATCCAGTGACGCAACTTTC-GCA-----------ATATGGCCTGATGAT------GGA---------------------------------------TGGATCGATTG------------G--GATT-G--GGGSizeHit CountTotal NormTotal
No Reads
droFic1
TCATCCATGAACTTGAAG--------CGTCACAA-AAG---------------------------TTT-----G--------------------GATA-----------------TGGGTGGGGGAGTAGGGAA-CT-------------------------------------------------------GGGTACT----TGAGG-----AC-----------------CCAATCGATTACTGTGAAAATAGAACCGAGTGCATAAATAAACAGTGTGTTGAGTGCCCT-------------------GTGAAAA-TAA----GGG-AGGG------GTAT------------------TGATGTTTGCC-T-------------------CA-----------------TTGTTTACCTATCCAATGACGCAACTTTT-GCA-----------ATATGGCCTGATGAT------GGAT--------------------------------------TGGATCGACCG------------A--TATT----GGGSizeHit CountTotal NormTotal
No Reads
droKik1
GCGCCCATGAACTTGAAGTGGTGCGTCGTCACCGGC----------------------CC-----A--TAGTGGG---------------------------------------------------------------------------CGG-----TGGT----------------GATGACGCGTACACGTGTACT----TGGGGC-CCTCC-----------------CTAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAGTG--TAAAGTGCCCGGTGCC------------CTGTGGAAAATAG----GGAGAAGGG----G--------------------T-TAATGTTTGCTGATTTGTATGTATGTGTATGTACATGTGGGTGTTTGTGTTTTGTTTGCCTTTCCAATGACGCAACTTTG-GCA-----------ATATGGCCTGATGAT------AAATGA-------------------------------ATAGATGGATCGATTG------------G-------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATGTTCATGAACTTGAAT--------CGTCACCA-GCG-CGGATTGGAG----------------GAT-----T--------------------GATG-----------------AGAGATGGGGA----------------------GCAGC-----CTGCAGTTGCCTGAGTCCGGAGCCCTGAGTCCACGTGTACT----TAAGAGGTGTCC-----------------ACAATCGATAGCTGCTAAAATAGAACCTCGTGCATAAATAAACATTG--TAAAGTGCCAT-------------------CCAAAAT--AG----GG--AC-----TAGGTACTGGCTACGAGGGGGAGCGCTTTGTTTAC--A-------------------AT-----------------GTGTTTGCTTATCCAATGACGCAATTTTC-GCA-----------ATATGGCCTGATGAT------G-AT-----------------------------------GGGTAGGTCGGTTG------------ACATAT--A--GCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................CTGCAGTTGCCTGAGTCCGGA..........................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
TTGCTCATGAACTTGAAT--------CGTCACCA-AACGCGGATTGGAGGATCGCAGCCG-----A------------------------------------------------------------------T-----------GGCGAGAGT-----CTGC----------------GGTGACGCGTCCACGTGTACT----TAAGAGGTGTCC-----------------ACAATCGATAGCTGCGAAAATAGAACCTCGTGCATAAATAAACATTG--TAAAGTGCCAT-------------------CTAGAAT--AG----GG--CGGG----------------------GGAGC----GTTTTGT--T-------------------AT-----------------GTGTTTGCTTATCCAATGACGCAATTTTC-GCA-----------ATATGGCCTGATGAT------G-A---------------------------------------TGGCTCGATTG------------ACATAT--A--GCCSizeHit CountTotal NormTotal
No Reads
dp5
GTCTCCA------------------------CC-------------------------CCAAAAGTTTTAGTGGGTGAGATGAGAATGAGGGCTAATTATATGTAGATGGATAGA-------------TGGGTG-CTGGGTGCTGTATATAGGGTGC-A----------------TAGAGGTTCCAGTACACGTGCACT----TGAGTC-TCTGCCTTGCCCCACCCTGGCCAAAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAATA--TAGAGTGCCCC-------TACCCGGATTCTAGGGAAG--GG------------------ACACT------GAGGAGGGGT----GGTTTGTT-T-------------------AC-----------------ATGTTTGCTTATCTAATGACGCAATTTTTAGCA-----------GTATGGCCTGATGAT------GGGTGACACCCACACACATATGTACATACATACACGAA-------------------CACAGA-GA--TAGT----GGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------GTATGGCCTGATGAT------GG.............................................................................1812.0020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGCA-----------GTATGGCCTGATGA......................................................................................2111.0010100000000
.......................................................................................GAGGGCTAATTATATGTAGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
TCGTCT----------------------CCACC-------------------------CCAAAAGTTTTAGTGGGTGAGATGAGAATGAGGGCTAATTATATGTAGATGGATAGA-------------TGGGTG-CTGGGTGCTGGATATAGGGTGT-A----------------TAGAGGTTCCAGTACACGTGCACT----TGAGTC-TCTGCCTTGCCCCACCCTGGCCAAAATCGATAACTGTGAAAATAGAACCGAGTGCATAAATAAACAATA--TAGAGTGCCCAAGACCCCTACCCCGATTCTAGGGAAG--GG------------------ACACT------GAGGAGGGGT----GGTTTGTT-T-------------------AC-----------------ATGTTTGCTTATCTAATGACGCAATTTTTAGCA-----------GTATGGCCTGATGAT------GGGTGACACCCACACACACAC--ATATACATACACGAA-------------------CACAGA-GA--TAGT----GGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------GTATGGCCTGATGAT------GGGTG..........................................................................2111.001001000
.........................................................................................................................................................................................AGTACACGTGCACT----TGAGTC-TC.........................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................GA-------------TGGGTG-CTGGGTGCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................1950.201000001
droWil2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-----------------ATAATCAATAACTGTGAAAATAGAATTGAGTGCATAAATAAACAATG--TAAAGTGCCTT---------CCCCAATTT-------------------------------------------------------AAACAGTT-T-------------------AC-----------------ACATTTGTTTATCCAATGACGCAATTTTC-GCAAAAAAAAAAAAATGTGGCCTGATGGCAAGAGTGGGTGAC------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................ATAGAATTGAGTGCATAAATAAAC..........................................................................................................................................................................................................................................................................................2411.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGATGGCAAGAGTGGGTGA.........................................................................2311.00100010
.............................................................................................................................................................................................................................................................AGAATTGAGTGCATAAATAAACAAT.......................................................................................................................................................................................................................................................................................2511.00100010
.................................................................................................................................................................................................................................................................TTGAGTGCATAAATAAACAATG--TAAAG...............................................................................................................................................................................................................................................................................2711.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTGATGGCAAGAGTGGGT...........................................................................2411.00100010

Generated: 05/17/2015 at 11:41 PM