ID:

der_1239

 Coordinate:

scaffold_4929:907198-907487 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -12.0 -11.8

Flybase annnotation

CDS [Dere\GG24625-cds]; exon [dere_GLEANR_9334:1]; CDS [Dere\GG24625-cds]; exon [dere_GLEANR_9334:2]; intron [Dere\GG24625-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------###########--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTACACCGCACACACACACACACACACACACCTGTGAATGTGTGCAAAGTGAGTGTGTCAGTGTGCGTCGAAGGAGAGGAAAGGTCAAGCCGAAAATTGCGTAAAGGAATTCGAAAAGATTAGAGGGGAAAGGGGAGTTACGTCAGTTTCGCATAAACGATAAACAGCTTCGATTCCCTGTGCGATCCCGATAGGCAGCCAGAACGATAAGCAAAAAACGATAACAGCGGAAATTAACGTCATTTTGGAGTAGAAAGCAGCCGATTCCGATATCGATATAAATTCCCGAAAGAATTCGAAAAATCAGACAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
************************************************************************************************************************************************************************(((((((((((((((...(((.......((..............)).......))).)))).))))............)))))))***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 M055
female body
 V108
head
 V040
embryo
 M057
embryo
........................................................................................................................................................................GCTTCGATTCCCTGTGCGATCCC....................................................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0
.........................................................................................................................................................................................................................................AATTAACGTCATTTTGGAGT......................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................CCCTGTGCGATCCCGATAGGCAGCC............................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................GATTCAGTTCGTGTACGTTTA........................................................ 21 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................TCCCTGTGCGATCCCGATAGGC................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATTCCGA...................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................AACGATAACAGCGGAAATTAACGTCA.................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0
........................................................................................................................ATTAGAGGGGAAAGGGGAGTTACGTC.................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................GTGCAAAGTGAGTGTGTCA........................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0
.................................................................................................................CGAAAAGATTAGAGGGGAAAGGGGA............................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................................AAATCAGACAAGATTCAGTTCGT................................................................. 23 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................................GTCATTTTGGAGTAGAAAGCAGC............................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................AAAATCAGACAAGATTCAGTTCGT................................................................. 24 0 1 1.00 1 0 0 1 0 0
...................................................TGAGTGTGTCAGTGTGCGTCG.............................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................TAGAGGGGAAAGGGGAGTTACGTCA................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.......................................................TGTGTCAGTGTGCGTCGAAGG.......................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................CACCTGTGAATGTGTGCAAAGTGAGT.............................................................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
........................................................GTGTCAGTGTGCGTCGAAGGAGA....................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................CTTCGATTCCCTGTGCGATCC........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1
................................................................................................................................................................GATAAACAGCTTCGATTCCCT................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
..........................................................GTCAGTGTGCGTCGAAGGAGA....................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATTCCGATATC.................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................TTAGAGGGGAAAGTGGAGT.......................................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................TATACAGCCTCCATTCCCTGT............................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 0 1 0
.........................................................................................................................................................................................................................................AATTAACGTCATTTTGGCGTAGA...................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................AATCAGACAAGATTCAGTTCGTGTACGTT.......................................................... 29 0 1 1.00 1 1 0 0 0 0
..................................TGTGAATGTGTGCAAAGTGAGTGTGT.......................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................................................TGAGTGTGTCAGTGTGCGTCGA............................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................AATCAGACAAGATTCAGTTCGT................................................................. 22 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................................TTAACGTCATTTTGGAGTAGAAATCA................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.........................................GTGTGCAAAGTGAGTGTGTCAGTGT.................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................TAAACAGCTTCGATTCCCTGTGCGAT.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
............................................................................................................................................................................................................................................................TAGAAAGCAGCCGATTCCGATATC.................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATTCC........................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
...........................................GTGCAAAGTGAGTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.............................................GCAAAGTGAGTGTGTCAGT...................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................ATCAGACAAGATTCAGTTCGTGTACGT........................................................... 27 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................ATCAGACAAGATTTAGTTCGT................................................................. 21 1 1 1.00 1 1 0 0 0 0
....................................................................................................................AAAGATTAGAGGGGAAAGGGGAGTTAC....................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................CTGTTCGATCCCGATTGG................................................................................................................................................................................................. 18 2 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................................ATTCCGATAACGATATAGACT........................................................................................................ 21 3 3 0.33 1 0 0 0 1 0
...................................................................................................................................................................................CGGTTCGATCCCGATTGGC................................................................................................................................................................................................ 19 3 20 0.15 3 0 2 1 0 0
.....................................................................................................................................................................................GTGCGATCCCGATTGGCTC.............................................................................................................................................................................................. 19 3 14 0.07 1 1 0 0 0 0
..................................................................................................................................................................................TCTGTTCGATCCCGATTGG................................................................................................................................................................................................. 19 3 14 0.07 1 0 1 0 0 0
................................................................................................................................................................................................................................AACAACAGAAATTAACGT.................................................................................................................................................... 18 2 20 0.05 1 0 0 1 0 0
....................................................................................................................................................................................................................................................................................................................GATAACATACAGTTCGTGT............................................................... 19 3 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

TTAATGTGGCGTGTGTGTGTGTGTGTGTGTGTGGACACTTACACACGTTTCACTCACACAGTCACACGCAGCTTCCTCTCCTTTCCAGTTCGGCTTTTAACGCATTTCCTTAAGCTTTTCTAATCTCCCCTTTCCCCTCAATGCAGTCAAAGCGTATTTGCTATTTGTCGAAGCTAAGGGACACGCTAGGGCTATCCGTCGGTCTTGCTATTCGTTTTTTGCTATTGTCGCCTTTAATTGCAGTAAAACCTCATCTTTCGTCGGCTAAGGCTATAGCTATATTTAAGGGCTTTCTTAAGCTTTTTAGTCTGTTCTAAGTCAAGCACATGCAAATGTTGTCGAGGCGCGGGGTGCGGCGGAGGAGGATGGCGTGGCGGCAGCGGGGGAAAC
*****************************************************************************************************************************************(((((((((((((((...(((.......((..............)).......))).)))).))))............)))))))************************************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 V060
head
 GSM1528801
follicle cells		 M055
female body
.........................TGTGTCTGGACTCTTACACGCGTT..................................................................................................................................................................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................................................................CTATTGCTATACTTAAGGGGT................................................................................................... 21 3 4 0.25 1 0 1 0 0
...............................................................................................................................................................GCAATTTGACGAAGCTAA..................................................................................................................................................................................................................... 18 2 7 0.14 1 1 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TGTTGTTGAGGCGCGGGC....................................... 18 2 7 0.14 1 1 0 0 0
.....................................................................................................................................................................................................GTCTGTCTTTCTATTCGTTTAT........................................................................................................................................................................... 22 3 9 0.11 1 1 0 0 0
...................................................................................................................TGTTCTAATCTCCCGCTTC................................................................................................................................................................................................................................................................ 19 3 13 0.08 1 1 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................AGGGCGTGGCAGCGGCGGGG..... 20 3 14 0.07 1 1 0 0 0
.........................................................................................................................AATCCCCCCTCTCCCCTAAA......................................................................................................................................................................................................................................................... 20 3 15 0.07 1 1 0 0 0
................................................................................................................................................................................................................................CTGGCGCCTTCAATTGCA.................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1
.......................................................................................................................................................................................................................................................................................................................................................GCGCGGGGTGCGACG................................ 15 1 20 0.05 1 0 0 1 0
...................................................................................................................................................................................................................................................................................................................................................CCAGGCGCGGGCTGCG................................... 16 2 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4929:907148-907537 - der_1239 AATTACA-CCGCACACACACACACAC--------ACACACACCTGTGAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTCAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGA-----------ATT----------------CGA------AAAGATT---AGAG-GGGA-AAGGGGAGTTACGTCAGTTTCGCATAAACGATAAACAGCTT-CGAT-TCCCTGT--------------------GCGATCCCG-------------------------------------------------------------------------ATA--GGCAGCCAGAACGATAAGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-AATTAACGTCATTTTGGAGTAGAAAGCAGCCGATT-CCGAT-------------------A-----T---------CGATATAAAT---TCCCGAAAGAATTCGAAAAATCAGACAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droYak3 2L:834194-834556 - dya_188 AATTACA-CCGCACACA----------CAAACATACACACACCTGTAAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTCAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGA-----------ATT--------------T-CGC------AAAGA-G---AGAG-GGGA-ACGGGGAGTTACGTCAGTTTCGCATGCACAATAAACAATTT-CGAT-TCCCTGG--------------------GCGATCCTG-------------------------------------------------------------------------ATA--GC----------------CAAAAAACGATAGC-------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTC---------------CGATA-CCGAT--AC--CTAT---ACCGAAA-----C---------CA------AT---TCCCGAAAGAATTCGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droSec2 scaffold_14:820984-821355 - AATCTCA-CCGCAC--------------------ACACACACCTGTGAG----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGGA-----------AAGG-AA----------AG-G-----AA--AGCTAC----GG-CGA---CGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCCATTACGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------A-----C---------CG------AT---TCCCGAAAGAATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droSim2 2l:813199-813570 - AATCGCA-CCGCAC--------------------ACACACACCTGTGAG----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCAA---AAAATTGCGTAAAGGA-----------AAGG-AA----------AG-G-----AA--AGCTAC----GG-CGA---GGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GTCAGCCATTGCGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-GATTTGCGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------A-----C---------CG------AT---TCCCGAAAGAATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
dm3 chr2L:850347-850720 - AATCGCA-CCGCAC--------------------ACACACACCTGTCAG----------------------------------TGTG--AGTGT-CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGAA-----------AAGG-AA----------AG-G-----AA--AGCTTAGAAGAG-GGGA--AGGGGAATTACGTCAGTTTCGCATTCCCGATAAAAATTTT-TGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCCATTACGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-AATTTACGTCAATTTGGAGCAGAAAGTAAACGATA-------------------------------C---------CA------AT---TCCCGAAAGAATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droEug1 scf7180000409554:1576610-1577071 - AATTATA-GCGCACAC------------------ACACACACCTGTAAT----------------------------------TTTG--TG----CAAAGTTGT-----G----TGTGCGAGTGTGAGGC-G----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGG-----------GAAG--------------A-GGT------AACGA-G---AGAG-CGGA---AAGGAGTTACGTCAGTTACGTATAGACGATAAGCAATATCCGATTACTCAGAACGTATTTCAATCCTTTACATTGATCTTAGTATGGAGA---------------------------------GTGAAG--------------------------TATTTG-------TACGATAAACAACAAGCGATATCCAATCTACCAAATTCGAT--TCCCCTTTTCACTTTCGCTTGTAT--------------CCGAAAGAAGACCGA-GATTAACGTCAAATTCTAATATACGATATACGATATCCGAT--AA----------CCGATT-----C---------CG------AT---TCATAAA-ATATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGTTCCGCGCCCCACGCCGCCTCCTCCTTCCGTACCGCCGTCGCCCCCTTTT
droBia1 scf7180000302261:2963483-2963900 + GGTTACG-GCACAC--------------------GCACACACCTGTGAT----------------------------------TTCG--TG--ACCAGAGCGGT-----G----TGTGTGAGTGTGAGGC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAGAAGGGGAAAAGGGAAG--------------AG-G-------AAAGA-G---AGAG-CGGA--GAGGGAGTTACGTCAGTTGCAAA-AAACGATAGGCAATAC-CGAT---------------------------------CTTAGACAG-------------------------------------------------------------------GATA--CCC-G--CTTGCGATAATCAATAACCGAAAGC--ACCGA------TCCAA--TCCGATACACAATCCCGATTGTACTG---------------------AGCGGA-GATTCCCGTCACATTCGAGCCTGCGATAAGCAATCTCCGAT--AG----------CCC--------------------ATAAAGGT---TTTTGAAAATATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCCTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTCG
droTak1 scf7180000415856:508819-509250 - CATTACA-GCACAC--------------------GCACACACCTGTGAT-T-----------------------------TTCTGTG--TGTGTCCA-AGT-GT----TGTGTGTGTGTGAGTGTGAGGC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGAA-----------AGGGGGAAGAGGAGAG-A-CGA------AAAGA-G---AGAG-CGGA--AAGAGAGTTACGTCAGTTACAAAAAAACGATAAACAATTTCCGATTTACCAAA--------------------TCGATCGAG------------------------------------------------------------------------GATA--TC-------TACGATAAACCGCA-----------ATCTAGAAAATTTCAT--TCCCATACAAAGTCTTGAT---ATTT---------------------ATCGGA-GTTTTACGTCAAATTCGATTAGGCGATAAGCAAAATCCGAT--AC----------TCG--------------------ATAACGATTTTTCGTTAA-AAATAAGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTTCCGCACCGCCGTCGCCCCCTTTG
droEle1 scf7180000490458:442349-442783 + AATCACA-GCACAC--------------------ACACACACCTGTGAT-TCTCATT------------------GT--------CGTGTG----T--TGTGGT-----G----TGTGTGAGTGTGAG-C-G----------------------AAGGAGAGGAAAGGTCAAGCTG---AAAATTGCGTAAAGT-----------GGAA--------------G-GGGGACGAAAAAGA-G---AGAG---AAAACGAAGAGTTACGTCAATTACGAATAAACGATAAACAATATCCGATAACCCGAAACCGCTTCCGATTCGTCATAACGATCGTGCAAAGGAGA---------------------------------ATAAAGAAAAGTTGAAGCGAAA-------------------------------------------------------------------------------CTTGAA---ATAA-----ATAAT-----AAAGAAAGCGGA-GATTTACGTCAAAAACAAAC-----AAAATCGATATTCGAT--AACCCCTTTAAACCGATT-----T---------CG------AT---ACCTGAA-AAATCAGGAAAATCAGGCAAGATTCAGTTCGTTTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droRho1 scf7180000769144:103112-103605 + AATTACA-GAACAC--------------------ACACACACCTGTGAC-T--------------------------------TTCGTGTG----T--AGTAGT-----G----TGTGTGAGTGTGAG-C-G----------------------AAGGAGAGGAAAGGTCAAGACG---AAAATTGCGTAAAGT-----------GGAA--------------A-GGGTACGGAAGAGC-G---AGAG-------CGAAGAGTTACGTCAATTACGTACAAGCGATAAATAATATCCGATAACTGGCGACCGCTTCCGATTTCTTATATCGATCGTGCAAAGGAGATAAAAGGAAGAGGTCAAGGCAAAATTAACGTCAGTTACG--------------------------TA--TT-------CATGATAAAAAATAAGAGAAAT--------------ACCATAAT-CCATAAACAATCTCGATTGTGCTAAGCGGAAAGTCGCGGAAAGAGAGCGGA-GATTTACGTCAAGTACGA--------AAAACGATATCAGAT--AACCCTTT---ACCGATT-----T---------CG------AT---TCCTGAA-AAATCAGGAAAATCAGGCAAGATTCAGTTCGTCTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droFic1 scf7180000453904:1120997-1121407 - CATTACA-GCGCAC----------------------ACACACCTGTGAA-C-----------------------------T--TGTG--TG----C--AGTGGT-----G----TGTGTGAGTGTGCGAC-A----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAAA-----------GGAG--------------T-----------------------G--GGA-AAGGAGAGTTACGTCAGTTACGAATATCCGATAAATAATATCCGATAACCCGAAACCTATTAAGACAGCTCCTATCGATCGTGAAAAGAGGA---------------------------------A------------GACGCGTAGCTGGAAAGGAT-----------------------------------------------------------ATATCCAATCTTGCTTCTGCTAAGCAAAAAATC------------TGGAGGATTTCTGTCAAAT---AATTTACCATAAACGACACATGAT--AA----------CCGATT-----C---------CG------TT---TCCTGAT-AAATCAGGAAAATCAGGCAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTG
droKik1 scf7180000301725:158443-158564 + CATTCAA-T-----------------------------------------TACCATT------------------GT-GCT--TGTG--TG-------AGT-GC-----G----CGCTTGAGTGTGTGC--G------------------AGGCAAGGAGAGGAAAGGTCAAGCCGTGGAAAGTTGCGTAAAGA-----------GAAGG-A-----------------------------------GGC-AA-AAAGAGAGTTACGTCAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:2739961-2740284 - TATTCCA-GCAAAA--A----------TAAAC--ACAAACACTTGTTTGTTGCTATTGCTATTACTGTTCCTGTTGTTGTT--GGTG--TG--------GT-GT-----G----TGCGTGCGTGTGTGTGAGAA----GAAGAGGAGGG--GGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGCAAAAA-----------GACGGGGCAG-------------------------G---CCAG-------CGGAGAGTTACGTCAGTTACA--TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGATAT-------T---ATCCGATCCAAGCCGATCTGATCGTTTGAAG-----CGT-----GACCCGGA-AAGCCAGCAACATTCAGTTCGTCTACGTTTACAACAGTTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTCG
droBip1 scf7180000396737:2024393-2024738 + TATTCCA-GCAAAG-TAAACACACTCGCAAAC--ACACACACTTGTTTGTTGCTGTTG----TGCTG-------------TGCTGTG--TG----T--AGT-GAGTGGTGTG--TGCGTGCGTGTGTGACAGAAAGCGGAGAAGGAGGGCAGGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAAA-----------GACGAGCCAGGCCAGGCCAG-G-------CCAGA-G---AAAC-TAG---CAGAGAGTTACGTCAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTA---------------CGGATAG-------C---ATCCGATCC----------GATCGTTTGAAG-----CGC-----GACCCCAAAAATCCATCAACATTCAGTTCGTCTACGTTTACAACAGCTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTTG
dp5 4_group3:5642090-5642177 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACG
droPer2 scaffold_1:7133032-7133119 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACG
droWil2 scf2_1100000004585:2290961-2291048 + AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTCAAAATTCAGTTCGTTTACGTTTATAACAGCGCCGCCCCCCACGCTGCTGACAAATATCGGTCCGCTGTTGCACCCTACG
droVir3 scaffold_13042:2754284-2754374 - AAATACAGGCACAC--ACACACACAC--------ACACACACATACATA----------------------------------TGTG--TG----C-----------------------------------A----------------------CAGTGGAGGGAAGACGGAGCCG---AAG---GCGTAGGGGA-----------ACT--------------T-GG-------AGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:23816585-23816657 + C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAAATCAGGCAAAATTCAGTTCGTTTACGTTTACAACAGCAGCGCTCCACACGCGGCCGACATTTATCAG-------------------
droGri2 scaffold_15252:7263145-7263202 - A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCAGGCAAAATTCAGTTCGCATACGTTTACAGCAGCAGCAGCAGCAGCACTGCC-------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
AATTACA-CCGCACACACACACACAC--------ACACACACCTGTGAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTCAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGA-----------ATT----------------CGA------AAAGATT---AGAG-GGGA-AAGGGGAGTTACGTCAGTTTCGCATAAACGATAAACAGCTT-CGAT-TCCCTGT--------------------GCGATCCCG-------------------------------------------------------------------------ATA--GGCAGCCAGAACGATAAGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-AATTAACGTCATTTTGGAGTAGAAAGCAGCCGATT-CCGAT-------------------A-----T---------CGATATAAAT---TCCCGAAAGAATTCGAAAAATCAGACAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................GCTT-CGAT-TCCCTGT--------------------GCGATCCC...........................................................................................................................................................................................................................................................................................................................................................................................2312.0022000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAACGTCATTTTGGAGT..............................................................................................................................................................................2012.0020000200
..............................................................................................................................................................................................................................................................................................................CCCTGT--------------------GCGATCCCG-------------------------------------------------------------------------ATA--GGCAGCC.....................................................................................................................................................................................................................................................................................................2511.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGTTCGTGTACGTTTA........................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................TCCCTGT--------------------GCGATCCCG-------------------------------------------------------------------------ATA--GGC.........................................................................................................................................................................................................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATT-CCGA..........................................................................................................................................................2111.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATAAC-------------------------------------------------------------------AGCGGA-AATTAACGTCA.......................................................................................................................................................................................2611.0010000010
..............................................................................................................................................................................................................................................ATT---AGAG-GGGA-AAGGGGAGTTACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
......................................................................................G--TG----CAAAGT-GA-----G----TGTGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.................................................................................................................................................................................................................................CGA------AAAGATT---AGAG-GGGA-AAGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCAGACAAGATTCAGTTCGT.................................................................2311.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATTTTGGAGTAGAAAGCAGC....................................................................................................................................................................2311.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCAGACAAGATTCAGTTCGT.................................................................2411.0010000010
....................................................................................................T-GA-----G----TGTGTCAGTGTGCGTC-G----------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
................................................................................................................................................................................................................................................T---AGAG-GGGA-AAGGGGAGTTACGTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................................................................................................................TGTGTCAGTGTGCGTC-G----------------------AAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................CACCTGTGAA----------------------------------TGTG--TG----CAAAGT-GA-----G----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...................................................................................................................GTGTCAGTGTGCGTC-G----------------------AAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
....................................................................................................................................................................................................................................................................................................CTT-CGAT-TCCCTGT--------------------GCGATCC............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
...........................................................................................................................................................................................................................................................................................GATAAACAGCTT-CGAT-TCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.....................................................................................................................GTCAGTGTGCGTC-G----------------------AAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATT-CCGAT-------------------A-----T---------C.....................................................................................................................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGACAAGATTCAGTTCGTGTACGTT..........................................................2911.0010000100
...........................................TGTGAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
....................................................................................................T-GA-----G----TGTGTCAGTGTGCGTC-G----------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGACAAGATTCAGTTCGT.................................................................2211.0010000100
....................................................................................GTG--TG----CAAAGT-GA-----G----TGTGTCAGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................................................................................................................................................TAAACAGCTT-CGAT-TCCCTGT--------------------GCGAT..............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAGCAGCCGATT-CCGAT-------------------A-----T---------C.....................................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGCAGCCGATT-CC............................................................................................................................................................1911.0010000100
......................................................................................G--TG----CAAAGT-GA-----G----TGTGTCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..........................................................................................G----CAAAGT-GA-----G----TGTGTCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGACAAGATTCAGTTCGTGTACGT...........................................................2711.0010000100
..........................................................................................................................................................................................................................................AAAGATT---AGAG-GGGA-AAGGGGAGTTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
droYak3
AATTACA-CCGCACACA----------CAAACATACACACACCTGTAAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTCAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGGA-----------ATT--------------T-CGC------AAAGA-G---AGAG-GGGA-ACGGGGAGTTACGTCAGTTTCGCATGCACAATAAACAATTT-CGAT-TCCCTGG--------------------GCGATCCTG-------------------------------------------------------------------------ATA--GC----------------CAAAAAACGATAGC-------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTC---------------CGATA-CCGAT--AC--CTAT---ACCGAAA-----C---------CA------AT---TCCCGAAAGAATTCGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................G----CAAAGT-GA-----G----TGTGTCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00402000020000
...............................................................................................................................................................................................................................................................................................................................................TG-------------------------------------------------------------------------ATA--GC----------------CAAAAAACGATAGC-------------------------------------------------------------------AGCGGA-GAT...............................................................................................................................................................................................3012.00200000000002
...................................................................................TGTG--TG----CAAAGT-GA-----G----TGTGTCAGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------CAAAAAACGATAGC-------------------------------------------------------------------AGCGGA-..................................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACGATAGC-------------------------------------------------------------------AGCGGA-..................................................................................................................................................................................................1911.00100100000000
.............................................................................................................G----TGTGTCAGTGTGCGTC-G----------------------AAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAAAAATCAGGCAAGATT.........................................................................2211.00100000010000
.........................................................................................................................GTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........................................................................................................................GTGCGTC-G----------------------AAGGAGAGGAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................GAAAGGTCAAGCCG---AAAATTGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................................GTAAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTACGTCAGTTC---------------CGATA-CCGA..........................................................................................................................................................2411.00100100000000
...........................................................................................................................................................................................................................................................................................................T-TCCCTGG--------------------GCGATCCTG-------------------------------------------------------------------------ATA--GC----------------CA........................................................................................................................................................................................................................................................................................2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAAAATCAGGCAAGATTCA.......................................................................2311.00100000010000
.....................................CACACCTGTAAA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.................................................................................................................................C-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
................................................A----------------------------------TGTG--TG----CAAAGT-GA-----G----TGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...............................................AA----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
............................................................................................................................................................................................TAAAGGA-----------ATT--------------T-CGC------AAAGA-G---A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................G----------------------AAGGAGAGGAAAGGTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
.................................................................................................................................................................................................................................CGC------AAAGA-G---AGAG-GGGA-ACGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................AATTGCGTAAAGGA-----------ATT--------------T-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................................................................................G--TG----CAAAGT-GA-----G----TGTGTCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................................................................................................................................G---AAAATTGCGTAAAGGA-----------ATT--------------T-CGC------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCTTACAACA...................................................2511.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGC-------------------------------------------------------------------AGCGGA-GATTTACGTCA.......................................................................................................................................................................................2311.00100000010000
................................................................................................AAAGT-GA-----G----TGTGTCAGTGTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---ACCGAAA-----C---------CA------AT---TCCCGAA..................................................................................................2111.00100100000000
droSec2
AATCTCA-CCGCAC--------------------ACACACACCTGTGAG----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGGA-----------AAGG-AA----------AG-G-----AA--AGCTAC----GG-CGA---CGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCCATTACGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-GATTTACGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------A-----C---------CG------AT---TCCCGAAAGAATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................G----CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
........................................................................................................................................................................................................................................AA--AGCTAC----GG-CGA---CGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCT..........................................................1811.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCTTACAAC....................................................2411.0011000
..........................................................................................................................................................................................................................................................................................................AT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--............................................................................................................................................................................................................................................................................................................2111.0010010
.......................................................................................................................GAGTGTGCGTC-G----------------------AAGGAGAGGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATA-CCGAT-------------------A-----C---------CG------AT---.........................................................................................................1811.0010010
..........................................................................................................................TGTGCGTC-G----------------------AAGGAGAGGAAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-G.................................................................................................................................................................................................2211.0011000
........................................................................................................................................................................................................................................AA--AGCTAC----GG-CGA---CGGGGAGTTACGTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
...................................................................................................................................................................................................................................................................................................................A--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCC.....................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................AA----------AG-G-----AA--AGCTAC----GG-CGA---CGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
.......................................CACCTGTGAG----------------------------------TGTG--TG----CAAAGT-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
..............................................................................................................................CGTC-G----------------------AAGGAGAGGAAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.................................................................................................AAGT-GA-----G----TGTGTGAGTGTGCGTC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..................................................................................................AGT-GA-----G----TGTGTGAGTGTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................................................................................................................................GAGAGGAAAGGTCAAGCCA---AAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGCAAGATTCAGTTCGTGTACG............................................................2611.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------------------------------------------------AGCGGA-GATTTACGTC........................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAC-------------------------------------------------------------------AGCGGA-GATTTACG..........................................................................................................................................................................................1911.0010010
....................................................................................GTG--TG----CAAAGT-GA-----G----TGTGTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...........................................................................................................................................................................................................................................................................................................T-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCC.....................................................................................................................................................................................................................................................................................................2711.0010010
.......................................................................................................A-----G----TGTGTGAGTGTGCGTC-A----------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100
droSim2
AATCGCA-CCGCAC--------------------ACACACACCTGTGAG----------------------------------TGTG--TG----CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCAA---AAAATTGCGTAAAGGA-----------AAGG-AA----------AG-G-----AA--AGCTAC----GG-CGA---GGGGGAGTTACGTCAGTTTCGCATTCCCGATAAACAATTT-AGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GTCAGCCATTGCGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-GATTTGCGTCAGTTTGGAGTAGAAAGTAAACGATA-CCGAT-------------------A-----C---------CG------AT---TCCCGAAAGAATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGCGTCAGTTTGGA................................................................................................................................................................................1814.00400400000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGTAGAAAGTAAAC...................................................................................................................................................................1812.00200200000000000000
..................................................................................................................................................................................................................................G-----AA--AGCTAC----GG-CGA---GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000002000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGTTCGTGTACGC...........................................................1812.00200200000000000000
..................................ACACACACCTGTGAG----------------------------------TGTG--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCAAGATTCAGTTCGTGTA..............................................................2311.00100010000000000000
...............................................................................................................................................................................................................AGG-AA----------AG-G-----AA--AGCTAC----GG-CGA---GGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
............................................................................................................................................................................................TAAAGGA-----------AAGG-AA----------AG-G-----AA--AGCTAC----GG-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCAAGATTCAGTTCGTGTACGCT..........................................................2711.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTCAGTTTGGAGTAGAAAGT.......................................................................................................................................................................2311.00100000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTGGAGTAGAAAGT.......................................................................................................................................................................1811.00100000000000100000
...................................................................................................................GTGTGAGTGTGCGTC-G----------------------AAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAC-------------------------------------------------------------------AGCGGA-GATTTGCGTCA.......................................................................................................................................................................................2311.00100000000000100000
............................................GTGAG----------------------------------TGTG--TG----CAAAGT-GA-----G----TG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------------------------------------------------AGCGGA-GATTTGCGTC........................................................................................................................................................................................1911.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTTCGTGTACGCC..........................................................1811.00100100000000000000
...................................................................................................................GTGTGAGTGTGCGTC-G----------------------AAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATA-CCGAT-------------------A-----C---------CG------AT---T........................................................................................................1911.00100000000000100000
........................................................................................................................................................................TCAAGCAA---AAAATTGCGTAAAGGA-----------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGC......................................................................................................................................................................................................2411.00100010000000000000
.............................................................................................................G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.......................................CACCTGTGAG----------------------------------TGTG--TG----CAAAGT-GA-----G----TGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAAGTAAACGATA-CC............................................................................................................................................................1911.00100100000000000000
.......................................................................................................................GAGTGTGCGTC-G----------------------AAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCAAAAAATCAGGCAAG............................................................................2011.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CCGAT-------------------A-----C---------CG------AT---TCCCGAAAG................................................................................................2111.00100000000000100000
.....................................................................................................................GTGAGTGTGCGTC-G----------------------AAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.............................................................................................................................................................GAGAGGAAAGGTCAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000100000000
..................................................................................................................TGTGTGAGTGTGCGTC-G----------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.........................................................................................................................GTGTGCGTC-G----------------------AAGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15120.08100000000010000000
.............................................................................................................................................................................................AAAGGA-----------AAGG-AA----------AG-G-----AA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
dm3
AATCGCA-CCGCAC--------------------ACACACACCTGTCAG----------------------------------TGTG--AGTGT-CAAAGT-GA-----G----TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGAA-----------AAGG-AA----------AG-G-----AA--AGCTTAGAAGAG-GGGA--AGGGGAATTACGTCAGTTTCGCATTCCCGATAAAAATTTT-TGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCCATTACGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-AATTTACGTCAATTTGGAGCAGAAAGTAAACGATA-------------------------------C---------CA------AT---TCCCGAAAGAATTCAAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
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OSC		V145
S2		V146
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTCAATTTGGAGCAG............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCCAGCCAT...................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCAAGATTCAGTTCGTGTACGCTTA........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTCAGTTCGTGTACGCT..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................GA-----G----TGTGTGAGTGTGCGTC-G----------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTAAACGATA-------------------------------C---------CA------AT---TCCCGAA..................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................TGTGTGAGTGTGCGTC-G----------------------AAGGAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................CCTGTCAG----------------------------------TGTG--AGTGT-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................CAAAGT-GA-----G----TGTGTGAGTGTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GTG--AGTGT-CAAAGT-GA-----G----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CCTGTCAG----------------------------------TGTG--AGTGT-CAAAGT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AAAGGTCAAGCCA---AAAATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGCAGAAAGTAAA....................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................GAGGAAAGGTCAAGCCA---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................G----TGTGTGAGTGTGCGTC-G----------------------AAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATAGGCAAAAAACGATAAC-------------------------------------------------------------------.........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AAAGGTCAAGCCA---AAAATTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAGCTCCGCGCCCCACGCCGCC...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAAGTAAACGATA-------------------------------C---------CA------AT---TCCCGA...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GTCAGTTTCGCATTCCCGATA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AAGT-GA-----G----TGTGTGAGTGTGCGTC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GTCAAGCCA---AAAATTGCGTAAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAC-------------------------------------------------------------------AGCGGA-AATTTACGTC........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................GAGTGTGCGTC-G----------------------AAGGAGAGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AA--AGCTTAGAAGAG-GGGA--AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATAGGCAAAAAACGA................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGTGTGCGTC-G----------------------AAGGAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGG....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATA-------------------------------C---------CA------AT---TCCCGAAC.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GGTCAAGCCA---AAAATTGCGTAAAGAA-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTCGTGTACGCTTACA......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................GAGTGTGCGTC-G----------------------AAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TGAT-TCCCTAA--------------------ACGATCCTG-------------------------------------------------------------------------ATA--GCC.........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GAG-GGGA--AGGGGAATTACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................................................................AATTACGTCAGTTTCGCATTCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAAGT-GA-----G----TGTGTGAGTGTGCGTC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTCAATTTGGAGCAGAAAGT.......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATAGGCAAAAAACG.................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCAATTTGGAGCAGA...........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AGAAGAG-GGGA--AGGGGAATTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AG----------------------------------TGTG--AGTGT-CAAAGT-GA-----G----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGTGTACGCTTACAACAGCTCCGCG...........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TG--AGTGT-CAAAGT-GA-----G----TGTGTGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GTCAGTTTCGCATTCCCGATAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................GTGAGTGTGCGTC-G----------------------AAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATAGGCAAAAAACGATAAC-------------------------------------------------------------------AGCGGA-..................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCCA---AAAATTGCGTAAAGAA-----------AAGG-A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAATCAGGCAAGATTCAGTTCGT.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................GGAAAGGTCAAGCCA---AAAATTGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CACCTGTCAG----------------------------------TGTG--AGTGT-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................GAAAGGTCAAGCCA---AAAATTGCGTAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
AATTATA-GCGCACAC------------------ACACACACCTGTAAT----------------------------------TTTG--TG----CAAAGTTGT-----G----TGTGCGAGTGTGAGGC-G----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAGG-----------GAAG--------------A-GGT------AACGA-G---AGAG-CGGA---AAGGAGTTACGTCAGTTACGTATAGACGATAAGCAATATCCGATTACTCAGAACGTATTTCAATCCTTTACATTGATCTTAGTATGGAGA---------------------------------GTGAAG--------------------------TATTTG-------TACGATAAACAACAAGCGATATCCAATCTACCAAATTCGAT--TCCCCTTTTCACTTTCGCTTGTAT--------------CCGAAAGAAGACCGA-GATTAACGTCAAATTCTAATATACGATATACGATATCCGAT--AA----------CCGATT-----C---------CG------AT---TCATAAA-ATATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGTTCCGCGCCCCACGCCGCCTCCTCCTTCCGTACCGCCGTCGCCCCCTTTTSizeHit CountTotal NormTotal
No Reads
droBia1
GGTTACG-GCACAC--------------------GCACACACCTGTGAT----------------------------------TTCG--TG--ACCAGAGCGGT-----G----TGTGTGAGTGTGAGGC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAGAAGGGGAAAAGGGAAG--------------AG-G-------AAAGA-G---AGAG-CGGA--GAGGGAGTTACGTCAGTTGCAAA-AAACGATAGGCAATAC-CGAT---------------------------------CTTAGACAG-------------------------------------------------------------------GATA--CCC-G--CTTGCGATAATCAATAACCGAAAGC--ACCGA------TCCAA--TCCGATACACAATCCCGATTGTACTG---------------------AGCGGA-GATTCCCGTCACATTCGAGCCTGCGATAAGCAATCTCCGAT--AG----------CCC--------------------ATAAAGGT---TTTTGAAAATATAAGGAAAATCAGGCAAGATTCAGTTCGTGTACGCCTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTCGSizeHit CountTotal NormTotal
No Reads
droTak1
CATTACA-GCACAC--------------------GCACACACCTGTGAT-T-----------------------------TTCTGTG--TGTGTCCA-AGT-GT----TGTGTGTGTGTGAGTGTGAGGC-G----------------------AAGGAGAGGAAAGGTCAAGCCG---AAAATTGCGTAAAGAA-----------AGGGGGAAGAGGAGAG-A-CGA------AAAGA-G---AGAG-CGGA--AAGAGAGTTACGTCAGTTACAAAAAAACGATAAACAATTTCCGATTTACCAAA--------------------TCGATCGAG------------------------------------------------------------------------GATA--TC-------TACGATAAACCGCA-----------ATCTAGAAAATTTCAT--TCCCATACAAAGTCTTGAT---ATTT---------------------ATCGGA-GTTTTACGTCAAATTCGATTAGGCGATAAGCAAAATCCGAT--AC----------TCG--------------------ATAACGATTTTTCGTTAA-AAATAAGAAAAATCAGGCAAGATTCAGTTCGTGTACGCTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTTCCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droEle1
AATCACA-GCACAC--------------------ACACACACCTGTGAT-TCTCATT------------------GT--------CGTGTG----T--TGTGGT-----G----TGTGTGAGTGTGAG-C-G----------------------AAGGAGAGGAAAGGTCAAGCTG---AAAATTGCGTAAAGT-----------GGAA--------------G-GGGGACGAAAAAGA-G---AGAG---AAAACGAAGAGTTACGTCAATTACGAATAAACGATAAACAATATCCGATAACCCGAAACCGCTTCCGATTCGTCATAACGATCGTGCAAAGGAGA---------------------------------ATAAAGAAAAGTTGAAGCGAAA-------------------------------------------------------------------------------CTTGAA---ATAA-----ATAAT-----AAAGAAAGCGGA-GATTTACGTCAAAAACAAAC-----AAAATCGATATTCGAT--AACCCCTTTAAACCGATT-----T---------CG------AT---ACCTGAA-AAATCAGGAAAATCAGGCAAGATTCAGTTCGTTTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droRho1
AATTACA-GAACAC--------------------ACACACACCTGTGAC-T--------------------------------TTCGTGTG----T--AGTAGT-----G----TGTGTGAGTGTGAG-C-G----------------------AAGGAGAGGAAAGGTCAAGACG---AAAATTGCGTAAAGT-----------GGAA--------------A-GGGTACGGAAGAGC-G---AGAG-------CGAAGAGTTACGTCAATTACGTACAAGCGATAAATAATATCCGATAACTGGCGACCGCTTCCGATTTCTTATATCGATCGTGCAAAGGAGATAAAAGGAAGAGGTCAAGGCAAAATTAACGTCAGTTACG--------------------------TA--TT-------CATGATAAAAAATAAGAGAAAT--------------ACCATAAT-CCATAAACAATCTCGATTGTGCTAAGCGGAAAGTCGCGGAAAGAGAGCGGA-GATTTACGTCAAGTACGA--------AAAACGATATCAGAT--AACCCTTT---ACCGATT-----T---------CG------AT---TCCTGAA-AAATCAGGAAAATCAGGCAAGATTCAGTTCGTCTACGTTTACAACGGTACCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droFic1
CATTACA-GCGCAC----------------------ACACACCTGTGAA-C-----------------------------T--TGTG--TG----C--AGTGGT-----G----TGTGTGAGTGTGCGAC-A----------------------AAGGAGAGGAAAGGTCAAGCCA---AAAATTGCGTAAAAA-----------GGAG--------------T-----------------------G--GGA-AAGGAGAGTTACGTCAGTTACGAATATCCGATAAATAATATCCGATAACCCGAAACCTATTAAGACAGCTCCTATCGATCGTGAAAAGAGGA---------------------------------A------------GACGCGTAGCTGGAAAGGAT-----------------------------------------------------------ATATCCAATCTTGCTTCTGCTAAGCAAAAAATC------------TGGAGGATTTCTGTCAAAT---AATTTACCATAAACGACACATGAT--AA----------CCGATT-----C---------CG------TT---TCCTGAT-AAATCAGGAAAATCAGGCAAGATTCAGTTCGTGTACGTTTACAACAGCTCCGCGCCCCACGCCGCCTCCTCCTACCGCACCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
droKik1
CATTCAA-T-----------------------------------------TACCATT------------------GT-GCT--TGTG--TG-------AGT-GC-----G----CGCTTGAGTGTGTGC--G------------------AGGCAAGGAGAGGAAAGGTCAAGCCGTGGAAAGTTGCGTAAAGA-----------GAAGG-A-----------------------------------GGC-AA-AAAGAGAGTTACGTCAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TATTCCA-GCAAAA--A----------TAAAC--ACAAACACTTGTTTGTTGCTATTGCTATTACTGTTCCTGTTGTTGTT--GGTG--TG--------GT-GT-----G----TGCGTGCGTGTGTGTGAGAA----GAAGAGGAGGG--GGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGCAAAAA-----------GACGGGGCAG-------------------------G---CCAG-------CGGAGAGTTACGTCAGTTACA--TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGATAT-------T---ATCCGATCCAAGCCGATCTGATCGTTTGAAG-----CGT-----GACCCGGA-AAGCCAGCAACATTCAGTTCGTCTACGTTTACAACAGTTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACCGCTCCGCCGTCGCCCC.....2212.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-------T---ATCCGATCCAAGCC..............................................................................................................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCAACATTCAGTTCGT.................................................................2111.001100000
...........................................................................GTTGTT--GGTG--TG--------GT-GT-----G----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCTCCTCGTACCGCTCCGCCGT...........2511.001000001
.............................................................................................................................................GAGGAGGG--GGCAAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCCGTCGCCCCCTT..1911.001100000
.............................................................................................................................GTGTGAGAA----GAAGAGGAGGG--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
......................................................................................................................................................................................GTTGCGCAAAAA-----------GACGGGGCAG-------------------------G---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............................................................................................................................................................................................................ACGGGGCAG-------------------------G---CCAG-------CGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................G-------------------------G---CCAG-------CGGAGAGTTACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..........................................................................................G--------GT-GT-----G----TGCGTGCGTGTGTGTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................GTTGTT--GGTG--TG--------GT-GT-----G----TGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....................................................................................................................................................G--GGCAAGGAGAGGAAAGGTCAAGCCG---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................GTGTGTGTGAGAA----GAAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................CGCAAAAA-----------GACGGGGCAG-------------------------G---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................AA-----------GACGGGGCAG-------------------------G---CCAG-------CGGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..................................................TGCTATTGCTATTACTGTTCCTGTTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................AGAGGAAAGGTCAAGCCG---AAAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................................................................................GTG--TG--------GT-GT-----G----TGCGTGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................................................................................................GT-GT-----G----TGCGTGCGTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
droBip1
TATTCCA-GCAAAG-TAAACACACTCGCAAAC--ACACACACTTGTTTGTTGCTGTTG----TGCTG-------------TGCTGTG--TG----T--AGT-GAGTGGTGTG--TGCGTGCGTGTGTGACAGAAAGCGGAGAAGGAGGGCAGGCAAGGAGAGGAAAGGTCAAGCCG---AAAGTTGCGTAAAAA-----------GACGAGCCAGGCCAGGCCAG-G-------CCAGA-G---AAAC-TAG---CAGAGAGTTACGTCAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTA---------------CGGATAG-------C---ATCCGATCC----------GATCGTTTGAAG-----CGC-----GACCCCAAAAATCCATCAACATTCAGTTCGTCTACGTTTACAACAGCTCCGCGCCCCACGCTGCCTCCTCGTACCGCTCCGCCGTCGCCCCCTTTGSizeHit CountTotal NormTotal
No Reads
dp5
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCCCACGTCGCGGATT...........................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTACAACAGCTCCGTCCC.........................................2111.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTCCGTCCCCCACGTCGCGGATT...........................2711.0010001000000
droPer2
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGGCAAAATTCAGTTCGTTTACGTCTACAACAGCTCCGTCCCCCACGTCGCGGATTCCTACCGCACGGCCGTCGCCCCCTACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCCCACGTCGCGGATTCCTACCG....................2611.001000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCTACCGCACGGCCGT...........2011.001001000
droWil2
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTCAAAATTCAGTTCGTTTACGTTTATAACAGCGCCGCCCCCCACGCTGCTGACAAATATCGGTCCGCTGTTGCACCCTACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTCCGCTGTTGCAC......1815.00550000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATATCGGTCCGCTGTTG.........2212.00200200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAGCGCCGCCCCCCACGCTG.................................2411.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTCCGCTGTTGCACC.....1811.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAATATCGGTCCGCTGTT..........2111.00100100
droVir3
AAATACAGGCACAC--ACACACACAC--------ACACACACATACATA----------------------------------TGTG--TG----C-----------------------------------A----------------------CAGTGGAGGGAAGACGGAGCCG---AAG---GCGTAGGGGA-----------ACT--------------T-GG-------AGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAAATCAGGCAAAATTCAGTTCGTTTACGTTTACAACAGCAGCGCTCCACACGCGGCCGACATTTATCAG-------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTTTACAACAGCAGCGC............................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCAAAATTCAGTTCGTTTACGT...........................................................2511.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAACAGCAGCGCTCCACACGCGGCC...............................2811.001100000
droGri2
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCAGGCAAAATTCAGTTCGCATACGTTTACAGCAGCAGCAGCAGCAGCACTGCC-------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAGCAGCAGCAGCA.......................................19200.05110

Generated: 05/17/2015 at 11:40 PM