ID:

der_1224

 Coordinate:

scaffold_4845:22268374-22268524 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.2 -22.9 -22.9

Flybase annnotation

CDS [Dere\GG19865-cds]; exon [dere_GLEANR_4712:2]; intron [Dere\GG19865-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACCCCGAGTTATAGTACATATTCCCTATCTTATATGTTTGTGTTGGCTGCCCCAAGTTTCTGCCGCACCAGCTGCCGGCAATGTGACGATGACGATGATGATGACACTAAGTAAACAGCCCTCCCTTTCATACAATCGATTTCGCTAAACTGGAAATTTTAAAAGCCAAAACTTTGTGCAGGCGTCTTGCCTCAT
**************************************************.((..(((.....(((((....(((..((..(((((((((((((.(((((((.(((..((......))..)))))))).)).))).)))))).))))..))..)))))))).....)))..))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 M057
embryo
 V040
embryo
 V108
head
 V107
male body
...................CAAGGACAGATACTACTCTGGC.................................................................................................................................................................................................................. 22 0 1 2.00 2 1 0 0 1 0
..........GCACAACATCAAGGACAGA.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................AAACAGCCCTCCCTTTCATACAATC.......................................................... 25 0 1 1.00 1 0 1 0 0 0
..............AACATCAAGGCCAGACACTACTCT..................................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
...........................GATACTACTCTGGCCTAATCTATAC....................................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
................CATCAAGGACAGATACTACTCTGGC.................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.......TTTGCACAACATCAAGGACAG............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.............CAACATCAAGGACAGATACTACTCT..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................ACGATGACGATGATGATCA........................................................................................... 19 1 19 0.05 1 0 0 0 0 1

Anti-sense strand reads

GGAGGCAAAACGTGTTGTAGTTCCTGTCTATGATGAGACCGGATTAGATACACTCATGGGGCTCAATATCATGTATAAGGGATAGAATATACAAACACAACCGACGGGGTTCAAAGACGGCGTGGTCGACGGCCGTTACACTGCTACTGCTACTACTACTGTGATTCATTTGTCGGGAGGGAAAGTATGTTAGCTAAAGCGATTTGACCTTTAAAATTTTCGGTTTTGAAACACGTCCGCAGAACGGAGTA
**************************************************.((..(((.....(((((....(((..((..(((((((((((((.(((((((.(((..((......))..)))))))).)).))).)))))).))))..))..)))))))).....)))..))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4845:22268324-22268574 - der_1224 CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------CCGA----GTT-AT-AGT---------------------ACATATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCTGCCGC---ACCAGCTG-------CCGGCAATGTGACG-ATGAC----------------------------------GATGATGAT--GA---CACTAA-GTAAACAGC-----------------------CCTCC-CTTTCATACAATCGATTTCGCTAAACTGGAAATTTTAAAAGCCAAAACTTTGTGCAGGCG-----TCTTGCCTCAT-
droYak3 2R:20857917-20858168 - CCTCCGTTTTGCACAACATCAAGGACAGATATTACTCTGGCCTTATCTATGTGAGTACC-------------------------------------------------------------------------------CCGA----GTT-GT-AGT---------------------ACAGATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGCTGCCGGCTGCCGGCAACGTGACG-A-----------------------------------TGA-----TGAT--GA---CACTAA-GTAAACAGC-----------------------CCTCC-CTTTCATACAATTGATTTCGCTTAACTGGAAACTTTGAAAGGCAAAACTTTATAGAGGCG-----TCTTGCCTCAT-
droSec2 scaffold_23:750433-750679 - CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------TCGA----GTT-AT-AGT---------------------ACATATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGTTG-------CCGGCAATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-GAAAACACA---------------CCG-----CC-CC-CCTTCACACAATCGATTTCGCTAAACTGAAAATTTTGAAAGGCATCACTTTATAGAGGCG-----TCTTGGCTCAT-
droSim2 2r:21356796-21357042 - dsi_29309 CCTCCGTCTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------TCGA----GTT-AT-AGT---------------------ACATATTCCCTATCTTAAATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGCTG-------CCGGCAATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-GTAAACACA---------------CCG-----CC-CC-TCTTCACACAATCGATTTCGCTAAACTGAAAATTTTGAAAGGCATAACTTTATAGAGGCG-----TCTTGGCTCAT-
dm3 chr2R:20893201-20893440 - CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------TCG--------------T---------------------ACATATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGCTG-------CCGGTAATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-GTAAACAGC-------------C--CC-----CC-CCCCTTTCACACATTTGATTTCGCTTAACTGGAAATTTTGAAAGGCCAAACTTTATAAAGGCG-----TCTTGCCTCAT-
droEug1 scf7180000409464:1428143-1428375 + CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTACC-------------------------------------------------------------------------------ACGA----ATA-AT-AGT-------------------------------------TTATGTTTG-----TT----TTGGACGCCCCA---------AA------CGTAGC---GCCAGCTG-------CCGGCAACGTGACG-TTGG-----------------------------------GTTGATGAT--GA---TTCTGA-GTAAACAGG-------------C--AC-----CT-TCCCTTTTCATCGATTGTTTTCGCTTTGCTGGAAATTTTGAAAGGCATAACGTTTTCAAGCCG-----TCTTGCCTCAT-
droBia1 scf7180000301754:5867007-5867258 - CCTCCGTTCTGCACAACATCAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTACC-------------------------------------------------------------------------------CC-A----GCC-AT-AGTTTATGTTTCGTGTTCTACAGTAC---------ATCCTACATGTTTG-----TG----TTGGCCGCCCCA-----------AGTTCCCGCCGC---GCCAGCTG-------CCGGCAATGTGACG-ATAGC---G------ATGCTGCTGG-----------TGG-----TGAT--GA---CTCTAA-GTAAACAGC-----------------------CCTCC-CCTA------------------TAACTGGAAATTTTGAAAGGCAAAACTTTGTCG-GGCG-----TCTTGCCTCAT-
droTak1 scf7180000415805:317406-317667 + CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTATT-------------------------------------------------------------------------------AT-AGAGAATT-AT-AGTCCGTATTCCCTATT-------CCA-------TATCTTATATGTTTG-----TG----TTGGCTGCCCCA----------AAGTTTCCGCCGC---GCCAGCTG-------CCGGCAATGTGACG-ACGAA----------------------------------GATGATGAC--GA---GTCTAA-GTAAACAGC-----------------------CCTCC-CCTTTAACCGAGCGTTTTCGCTTTGCTGGAAATTTTGAAAGGCTAAACTTTGTCGAGCCG-----TCGTGCCTCAT-
droEle1 scf7180000491107:289233-289327 + CCTCCGTTTTGCACAACATTAAGGACAGATACTACTCTGGCCTGATCTATGTAAGTACC-------------------------------------------------------------------------------TTAA----ATT-AT-ATT---------------------TAATTCTCTTTTGCTTATA-GTTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778233:32814-33050 - CCTCCGTTTTGCACAACATTAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTACA-------------------------------------------------------------------------------TCGA----ATT-AT-AAT---------------------TCAT-------ATCTTTCATGTTTG-----TG----TTGGCTGCCCCA----------AAGTTTCCGACGA---ACCAGCTG-------CCGGCAATGTGACG-ACTGC---TAT-------ATAA--------------TGG-----CGAT--GA---CACTAA-GTAAACAGT------------------------------TTTTAACCAAGAGATTTCGCTTTGCTGAAAATTTAA-------AAACTTTGTCGAGCCG-----TCTTGCCTCAT-
droFic1 scf7180000453858:599873-600102 + CCTCCGTTTTGCACAACATCAAGGACAGATACTATTCTGGCCTGATCTATGTGAGTACC-------------------------------------------------------------------------------ACGA----GTT-AT-AGT---------------------CCATA-TCTTATAC--ATATGTTTCTTGGCTG----TTGGCTGCCCCA----------AAGTTTCCGCCGC---GCCAGCTG-------TCGGCAATGTGACG-ACCAC---C---------ATAA--------------TGG-----TGAT--GG---CTCTAA-GTAAACAG-------------------------------------------------GCTTTGCTGGAAAT-TTGAAAGGCA-AACCTTGTCGAGGCG-----TCTTGTCTCGT-
droKik1 scf7180000302366:1041346-1041576 - CCTCCGTGCTGCACAACATCAAGGACAGATATTACTCTGGCCTGATCTATGTAAGTAAC-------------------------------------------------------------------------------TTGA----ATTTGT-AG----------------------------GCGTAAGTTGGAATGTTTG-----TC----TTGGCCGCCGGA---------AAAGTTTCCGCTGT---GCCAGCTG-------CCGGCAATGTGACG-C-GGC---TAGCGTAATAATAATGA-----------T--GATGATGAT--GG---CGCTGA-GTAAACAGC-------------T--GG-----CT-TCCCTTT-----------------------GAAAAT---------------TCGGCGGAGGAG---AGTATT-CCTCATA
droAna3 scaffold_13266:12185912-12186111 - CCTCCGTGCTGCACAACATCAAAGACAGATACTACTCTGGCTTGATCTATGTGAGTATACT------------------------CCCCCACC--------------------CC-----------------------CCCA----GTT-A---GT-----------------------------------CT-AATGTTTG-----TG----TTGGCTCACTCG---------AAAGTTTCCGCCGG--AGCCAGCTG-------CTGGCAATGTGACG-ACGAC---C---------CTAA--------------TGA-----TGATGTGA---CTCCGC-GTAAACAGAGAC----------------------------------------------------------------------------------GGCGGCCGGTG--CCGTCATC
droBip1 scf7180000396547:294913-294994 + CCTCCGTGCTGCACAACATCAAAGACAGATACTATTCTGGCTTGATCTATGTGAGTATA-------------------------------------------------------------------------------T-------ATC-TT-AAC---------------------ACCTATCCCCTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:2011494-2011697 - GTAC------------------------------------------ATATGTATGT-------------------------------------------------------------------------------------------------------------------------------------ACATACAAATTTG-----TG----TTGGAAGACTTG---------AAAGTTGCCGCTGT---GCCAGCTG-------TTGGCAAGATGACG-ACGACAGCCACCATGATGCTAATGG-----------T--GATGATGAT--GACGACTTTAGAGTAAACAAAAACAACATAAATACATCCCTATCCCTCC-CTA----------------AGTTTTCTGGAATTATTGAAAAGCGAAACTCTGT-----------------CCTCAA-
droPer2 scaffold_2:2183846-2184032 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAATTTA-----TG----TTGGAAGACTTG---------AAAGTTGCCGCTGT---GCCAGCTG-------TTGGCAAGATGACG-ACGACAGCCACCATGATGCTAATGG-----------T--GATGATGAT--GACGACTTTAGAGTAAACAACAACAACATAAATACATCCCTATCCCTCC-CTA----------------AGTTTTCTGGAATTATTGAAAAGCGAAACTCTGT-----------------CCTCAA-
droWil2 scf2_1100000004510:1928098-1928322 - dwi_431 CCTCTGTATTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTACAAA------------------------CACACACAAACAACAACAAAAACAAATACAA--ATACAAAAAAA--AAGACATTAGA----GGC-ATTAGA-----------------------------------TG---ATTTTT-----CG----TTGGGGGGCCCAAACATGTTGAAAGTTTCCGCCATGTGACCAGCTG-------TTGGCAATATGACG-ACGAC---C---------AAG-T--CAACTTAAGAA---GATGATGAT--GA-----------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:17141743-17141959 + dvi_7417 CGTCCGTGTTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTACCAATATGCCCC--CTATATACCCTATATACACACATACATATG------CCCATTCCCACAAACCAAATAGAGAAACCATTA--GAGAAT------------------------------------------------TGACTG-----TGCGACGGGATTGCTCGA----------AAGTTGCCA---------CAGCTG-------CTGGCAATGTGACG-A-----------------------------------TGA--TGACGCG--AA---CTTTAG-ATAAACA------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:10860762-10860968 - CGTCCGTGTTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTATCAATGTGCTCCAGCTAAATACCCAA--TACATACAGACATTTGTATAGACCCATGCCC--AAAGCAAATAG--ATGCCATTA--GAG--------------------------------------------------------------AG----GGGATTGCTTG----------AAAGCTGCC---------ACAGCTG-------CTGGCAATGTGACGGA-----------------------------------TGA--TGACGCG--AA---CTTTAG-ATAAACA------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:16670288-16670348 + CGTCCGTTTTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTACT-------------------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------CCGA----GTT-AT-AGT---------------------ACATATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCTGCCGC---ACCAGCTG-------CCGGCAATGTGACG-ATGAC----------------------------------GATGATGAT--GA---CACTAA-GTAAACAGC-----------------------CCTCC-CTTTCATACAATCGATTTCGCTAAACTGGAAATTTTAAAAGCCAAAACTTTGTGCAGGCG-----TCTTGCCTCAT-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................CAAGGACAGATACTACTCTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021000010
..........GCACAACATCAAGGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.........................................................................................................................................................................................................................................................................................................................................................AAACAGC-----------------------CCTCC-CTTTCATACAATC................................................................2511.0010100000
...........................GATACTACTCTGGCCTAATCTATAC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
................CATCAAGGACAGATACTACTCTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......TTTGCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.............CAACATCAAGGACAGATACTACTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
droYak3
CCTCCGTTTTGCACAACATCAAGGACAGATATTACTCTGGCCTTATCTATGTGAGTACC-------------------------------------------------------------------------------CCGA----GTT-GT-AGT---------------------ACAGATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGCTGCCGGCTGCCGGCAACGTGACG-A-----------------------------------TGA-----TGAT--GA---CACTAA-GTAAACAGC-----------------------CCTCC-CTTTCATACAATTGATTTCGCTTAACTGGAAACTTTGAAAGGCAAAACTTTATAGAGGCG-----TCTTGCCTCAT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......TTTGCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................ATCAAGGACAGATATTACTCTGGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...........................................TATCTATGTGAGTACC-------------------------------------------------------------------------------CCGA----........................................................................................................................................................................................................................................................................................................................2011.00100000010000
.......TTTGCACAACATCAAGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
............................ATATTACTCTGGCCTTATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGCAAAACTTTATAGAGGCG-----............2311.00101000000000
..............AACATCAAGGACAGATATTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.CTCCGTTTTGCACAACATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....GTTTTGCACAACATCAAGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
................................................................................................................................................................................................................................................................................................................................................CACTAA-GTAAACAGC-----------------------CCTCC-CTTT.........................................................................2411.00101000000000
...................CAAGGACAGATATTACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.....GTTTTGCACAACATCAAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........TGCACAACATCAAGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000
droSec2
CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------TCGA----GTT-AT-AGT---------------------ACATATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGTTG-------CCGGCAATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-GAAAACACA---------------CCG-----CC-CC-CCTTCACACAATCGATTTCGCTAAACTGAAAATTTTGAAAGGCATCACTTTATAGAGGCG-----TCTTGGCTCAT-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........TTGCACAACATCAAGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021010
...............................................................................................................................................................................................................................................................................AATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-G..................................................................................................................2611.0010010
.........TGCACAACATCAAGGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
droSim2
CCTCCGTCTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------TCGA----GTT-AT-AGT---------------------ACATATTCCCTATCTTAAATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGCTG-------CCGGCAATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-GTAAACACA---------------CCG-----CC-CC-TCTTCACACAATCGATTTCGCTAAACTGAAAATTTTGAAAGGCATAACTTTATAGAGGCG-----TCTTGGCTCAT-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........GCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300300000000000000
.............................TACTACTCTGGCCTAATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................1913.00303000000000000000
...........................GATACTACTCTGGCCTAATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100000000000000
.............CAACATCAAGGACAGATACTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
............................ATACTACTCTGGCCTAAT............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.................ATCAAGGACAGATACTACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...........CACAACATCAAGGACAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCTAAACTGAAAATTTTGAAAGGCAT................................2911.00100100000000000000
.......CTTGCACAACATCAAGGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
............................ATACTACTCTGGCCTAATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...............ACATCAAGGACAGATACTACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.........TGCACAACATCAAGGACAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......TCTTGCACAACATCAAGGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.......CTTGCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............ACAACATCAAGGACAGATACTACTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..........GCACAACATCAAGGACAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.......................GACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.......................................................................................................................................................................................................................................................................................G-A-----------------------------------TGA-----TGAT--GA---AACTAA-GT.................................................................................................................1911.00100100000000000000
........................ACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
dm3
CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTAATCTATGTGAGTACC-------------------------------------------------------------------------------TCG--------------T---------------------ACATATTCCCTATCTTATATGTTTG-----TG----TTGGCTGCCCCA-----------AGTTTCCGCCGC---GCCAGCTG-------CCGGTAATGTGACG-A-----------------------------------TGA-----TGAT--GA---AACTAA-GTAAACAGC-------------C--CC-----CC-CCCCTTTCACACATTTGATTTCGCTTAACTGGAAATTTTGAAAGGCCAAACTTTATAAAGGCG-----TCTTGCCTCAT-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................AAGGACAGATACTACTCTGGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000
..................TCAAGGACAGATACTACTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
..........GCACAACATCAAGGACAGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.............CAACATCAAGGACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGCACAACATCAAGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGGACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................G-A-----------------------------------TGA-----TGAT--GA---AACTAA-GTAAACAGC-------------C--..........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................TACTACTCTGGCCTAATCTATAC......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATACTACTCTGGCCTAATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATACTACTCTGGCCTAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATACTACTCTGGCCTAATCTATACA.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATCAAGGACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCCGTTTTGCACAACATCAAGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........GCACAACATCAAGGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................AAGGACAGATACTACTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGGACAGATACTACTCTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATCAAGGACAGATACTACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GGTAATGTGACG-A-----------------------------------TGA-----TGAT--GA---A.........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................TCAAGGACAGATACTACTCTGGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAACATCAAGGACAGATACTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................TCAAGGACAGATACTACTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.CTCCGTTTTGCACAACATCAAGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CAGATACTACTCTGGCCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGATACTACTCTGGCCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACTCTGGCCTAATCTATGT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...........................GATACTACTCTGGCCTAATCTATA.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATCAAGGACAGATACTACTCTGGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTGAGTACC-------------------------------------------------------------------------------TCG--------------T---------------------ACATATTCCCTATCT..........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGGACAGATACTACTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCAAGGACAGATACTACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............................ATACTACTCTGGCCTAATCTAT........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAACTTTATAAAGGCG-----TCT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTATATGTTTG-----TG----TTGGCTGC.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........TGCACAACATCAAGGACAGATAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................AGATACTACTCTGGCCTAATCTATACA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCAAGGACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTTTTGCACAACATCAAGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................ATGTGACG-A-----------------------------------TGA-----TGAT--GA---AAC.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................CAAGGACAGATACTACTCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGTTTTGCACAACATCAAGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGGACAGATACTACTCTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTCCGTTTTGCACAACATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGTTTTGCACAACATCAAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................A-----------------------------------TGA-----TGAT--GA---AACTAA-GTAAACAG...........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTACC-------------------------------------------------------------------------------ACGA----ATA-AT-AGT-------------------------------------TTATGTTTG-----TT----TTGGACGCCCCA---------AA------CGTAGC---GCCAGCTG-------CCGGCAACGTGACG-TTGG-----------------------------------GTTGATGAT--GA---TTCTGA-GTAAACAGG-------------C--AC-----CT-TCCCTTTTCATCGATTGTTTTCGCTTTGCTGGAAATTTTGAAAGGCATAACGTTTTCAAGCCG-----TCTTGCCTCAT-SizeHit CountTotal NormTotal
No Reads
droBia1
CCTCCGTTCTGCACAACATCAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTACC-------------------------------------------------------------------------------CC-A----GCC-AT-AGTTTATGTTTCGTGTTCTACAGTAC---------ATCCTACATGTTTG-----TG----TTGGCCGCCCCA-----------AGTTCCCGCCGC---GCCAGCTG-------CCGGCAATGTGACG-ATAGC---G------ATGCTGCTGG-----------TGG-----TGAT--GA---CTCTAA-GTAAACAGC-----------------------CCTCC-CCTA------------------TAACTGGAAATTTTGAAAGGCAAAACTTTGTCG-GGCG-----TCTTGCCTCAT-SizeHit CountTotal NormTotal
No Reads
droTak1
CCTCCGTTTTGCACAACATCAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTATT-------------------------------------------------------------------------------AT-AGAGAATT-AT-AGTCCGTATTCCCTATT-------CCA-------TATCTTATATGTTTG-----TG----TTGGCTGCCCCA----------AAGTTTCCGCCGC---GCCAGCTG-------CCGGCAATGTGACG-ACGAA----------------------------------GATGATGAC--GA---GTCTAA-GTAAACAGC-----------------------CCTCC-CCTTTAACCGAGCGTTTTCGCTTTGCTGGAAATTTTGAAAGGCTAAACTTTGTCGAGCCG-----TCGTGCCTCAT-SizeHit CountTotal NormTotal
No Reads
droEle1
CCTCCGTTTTGCACAACATTAAGGACAGATACTACTCTGGCCTGATCTATGTAAGTACC-------------------------------------------------------------------------------TTAA----ATT-AT-ATT---------------------TAATTCTCTTTTGCTTATA-GTTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCTCCGTTTTGCACAACATTAAGGACAGATACTACTCTGGCCTGATCTATGTGAGTACA-------------------------------------------------------------------------------TCGA----ATT-AT-AAT---------------------TCAT-------ATCTTTCATGTTTG-----TG----TTGGCTGCCCCA----------AAGTTTCCGACGA---ACCAGCTG-------CCGGCAATGTGACG-ACTGC---TAT-------ATAA--------------TGG-----CGAT--GA---CACTAA-GTAAACAGT------------------------------TTTTAACCAAGAGATTTCGCTTTGCTGAAAATTTAA-------AAACTTTGTCGAGCCG-----TCTTGCCTCAT-SizeHit CountTotal NormTotal
No Reads
droFic1
CCTCCGTTTTGCACAACATCAAGGACAGATACTATTCTGGCCTGATCTATGTGAGTACC-------------------------------------------------------------------------------ACGA----GTT-AT-AGT---------------------CCATA-TCTTATAC--ATATGTTTCTTGGCTG----TTGGCTGCCCCA----------AAGTTTCCGCCGC---GCCAGCTG-------TCGGCAATGTGACG-ACCAC---C---------ATAA--------------TGG-----TGAT--GG---CTCTAA-GTAAACAG-------------------------------------------------GCTTTGCTGGAAAT-TTGAAAGGCA-AACCTTGTCGAGGCG-----TCTTGTCTCGT-SizeHit CountTotal NormTotal
No Reads
droKik1
CCTCCGTGCTGCACAACATCAAGGACAGATATTACTCTGGCCTGATCTATGTAAGTAAC-------------------------------------------------------------------------------TTGA----ATTTGT-AG----------------------------GCGTAAGTTGGAATGTTTG-----TC----TTGGCCGCCGGA---------AAAGTTTCCGCTGT---GCCAGCTG-------CCGGCAATGTGACG-C-GGC---TAGCGTAATAATAATGA-----------T--GATGATGAT--GG---CGCTGA-GTAAACAGC-------------T--GG-----CT-TCCCTTT-----------------------GAAAAT---------------TCGGCGGAGGAG---AGTATT-CCTCATASizeHit CountTotal NormTotal
No Reads
droAna3
CCTCCGTGCTGCACAACATCAAAGACAGATACTACTCTGGCTTGATCTATGTGAGTATACT------------------------CCCCCACC--------------------CC-----------------------CCCA----GTT-A---GT-----------------------------------CT-AATGTTTG-----TG----TTGGCTCACTCG---------AAAGTTTCCGCCGG--AGCCAGCTG-------CTGGCAATGTGACG-ACGAC---C---------CTAA--------------TGA-----TGATGTGA---CTCCGC-GTAAACAGAGAC----------------------------------------------------------------------------------GGCGGCCGGTG--CCGTCATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................GACAGATACTACTCTGGCTTGATCTATAC......................................................................................................................................................................................................................................................................................................................................................................................................................2912.002020000
.............................TACTACTCTGGCTTGATCTATAC......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................TGTGA---CTCCGC-GTAAACAGAGAC----------------------------------------------------------------------------------GGC..................2611.001100000
.......................GACAGATACTACTCTGGCTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................CAGATACTACTCTGGCTTGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
CCTCCGTGCTGCACAACATCAAAGACAGATACTATTCTGGCTTGATCTATGTGAGTATA-------------------------------------------------------------------------------T-------ATC-TT-AAC---------------------ACCTATCCCCTACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GTAC------------------------------------------ATATGTATGT-------------------------------------------------------------------------------------------------------------------------------------ACATACAAATTTG-----TG----TTGGAAGACTTG---------AAAGTTGCCGCTGT---GCCAGCTG-------TTGGCAAGATGACG-ACGACAGCCACCATGATGCTAATGG-----------T--GATGATGAT--GACGACTTTAGAGTAAACAAAAACAACATAAATACATCCCTATCCCTCC-CTA----------------AGTTTTCTGGAATTATTGAAAAGCGAAACTCTGT-----------------CCTCAA-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAATTTA-----TG----TTGGAAGACTTG---------AAAGTTGCCGCTGT---GCCAGCTG-------TTGGCAAGATGACG-ACGACAGCCACCATGATGCTAATGG-----------T--GATGATGAT--GACGACTTTAGAGTAAACAACAACAACATAAATACATCCCTATCCCTCC-CTA----------------AGTTTTCTGGAATTATTGAAAAGCGAAACTCTGT-----------------CCTCAA-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................CAGCTG-------TTGGCAAGATGACG-AC...............................................................................................................................................................................2211.001100000
.................................................................................................................................................................................................................................................................................................................G-----------T--GATGATGAT--GACGACTTT......................................................................................................................2011.001010000
droWil2
CCTCTGTATTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTACAAA------------------------CACACACAAACAACAACAAAAACAAATACAA--ATACAAAAAAA--AAGACATTAGA----GGC-ATTAGA-----------------------------------TG---ATTTTT-----CG----TTGGGGGGCCCAAACATGTTGAAAGTTTCCGCCATGTGACCAGCTG-------TTGGCAATATGACG-ACGAC---C---------AAG-T--CAACTTAAGAA---GATGATGAT--GA-----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........TGCACAACATCAAAGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
.....GTATTGCACAACATCAAAGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020
.......................GACAGATATTACTCTGGCTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.................ATCAAAGACAGATATTACTCTGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................GATATTACTCTGGCTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.............................TATTACTCTGGCTTGATCTATAC......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.........TGCACAACATCAAAGACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.............................TATTACTCTGGCTTGATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..................................................................................................................................................................................................................................................................................................................CAACTTAAGAA---GATGATGA..................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................................................TGACCAGCTG-------TTGGCAATATGACG-AC...............................................................................................................................................................................2611.00101000
.........TGCACAACATCAAAGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.............................TATTACTCTGGCTTGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........GCACAACATCAAAGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.....................................................................................................................................................................................................................................................CATGTGACCAGCTG-------TTGG............................................................................................................................................................................................1811.00100010
droVir3
CGTCCGTGTTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTACCAATATGCCCC--CTATATACCCTATATACACACATACATATG------CCCATTCCCACAAACCAAATAGAGAAACCATTA--GAGAAT------------------------------------------------TGACTG-----TGCGACGGGATTGCTCGA----------AAGTTGCCA---------CAGCTG-------CTGGCAATGTGACG-A-----------------------------------TGA--TGACGCG--AA---CTTTAG-ATAAACA------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................GACAGATATTACTCTGGCTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000002
.GTCCGTGTTGCACAACATCAAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
........TTGCACAACATCAAAGACAGATATTACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000100000000000000
............ACAACATCAAAGACAGATATTACTCTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000000000000010000
...........CACAACATCAAAGACAGATATTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
.GTCCGTGTTGCACAACATCAAAGACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
CGTCCGTGTTGCACAACATCAAAGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
......................AGACAGATATTACTCTGGCTTGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
............ACAACATCAAAGACAGATATTACTCTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000001
...........................GATATTACTCTGGCTTGATCTATAC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000010000000000000000000000000
.....................AAGACAGATATTACTCTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
CGTCCGTGTTGCACAACATCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
...CCGTGTTGCACAACATCAAAGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
.......................GACAGATATTACTCTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
CGTCCGTGTTGCACAACATCAAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTGACG-A-----------------------------------TGA--TGACGCG--AA---CT........................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
................................................................................................................................................................................................................................................................................ATGTGACG-A-----------------------------------TGA--TGACGAT--...............................................................................................................................19190.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
CGTCCGTGTTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTATCAATGTGCTCCAGCTAAATACCCAA--TACATACAGACATTTGTATAGACCCATGCCC--AAAGCAAATAG--ATGCCATTA--GAG--------------------------------------------------------------AG----GGGATTGCTTG----------AAAGCTGCC---------ACAGCTG-------CTGGCAATGTGACGGA-----------------------------------TGA--TGACGCG--AA---CTTTAG-ATAAACA------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................CAGATATTACTCTGGCTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.......GTTGCACAACATCAAAGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........TGCACAACATCAAAGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................GATATTACTCTGGCTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
CGTCCGTTTTGCACAACATCAAAGACAGATATTACTCTGGCTTGATCTATGTAAGTACT-------------------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:38 PM