ID:

der_1167

 Coordinate:

scaffold_4845:16322522-16322672 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.8 -21.5 -21.5

Flybase annnotation

CDS [Dere\GG22476-cds]; exon [dere_GLEANR_7204:4]; intron [Dere\GG22476-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAACGGATGCTATCGACAGACCCACCCAACTGGCATGGTTGTGGAGGCATGTGTGTGCACCTCCCGAGTGGGCTTGATACCCTGTAATGGCTGCTCGAAATCGCAGAGTGCGCTGATGGGCTGGGCTCTTTGTGTGCTCGGCCTTTATCAATGGCTATATAAATATCGAATAGTTTGAACTACAAATACACACGATTCTGCCTTTATGTAATGTGACATTTCCGGGCTTTTGATTTTGACAAGTTTTTGCA
************************************************************************************************.....((((...)))).(((((((((((((.........)))))))))..))))..((((((...........))))))..................********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V108
head
 V107
male body		 V040
embryo
 V060
head
.........................................................................................................................................................................ATAGTTTGAACTACAAATACACAC.......................................................... 24 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................TTGAACTACAAATACACACGATTCTGC.................................................. 27 0 1 1.00 1 1 0 0 0 0
................................................................................................GAAATCGCAGAGTGCGCTGATGGGCTG................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0
.....................................................................................................CGCAGAGTGCGCTGATGGGCTGGCCTC........................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
................................................................................................GAAATCGCAGAGTGCGCT......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
....................................................................................................TCGCAGAGTGCGCTGATGGGC.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................CACGATTCTGCCTTTATGT.......................................... 19 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................ACGATTCTGCCTTTATGT.......................................... 18 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................ATCGAATAGTTTGAACTAC.................................................................... 19 0 1 1.00 1 1 0 0 0 0
...............................................................................................CGAAATCGCAGAGTGCGCTGATGGGCT................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.............................................................................................CTCGAAATCGCAGAGTGCGCTGATGGG................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0
...........................................................................................................GTGCGCTGATGGGCTGGGCT............................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
...............................................................................................CGAAATCGCAGAGTGCGCTGATGG.................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.............................CTGGCATGGTTGTGGAGGCATGT....................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
........................................................................CTTGATACCCTGTAATGGCTGCT............................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
...............................................................................................CGACATCGCAGAGTGCGCTGATGG.................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
....GGATGCTATCGACAGACCCA................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
.......................................................................................................CAAAGTGCGCTGATGGGCT................................................................................................................................. 19 1 1 1.00 1 0 1 0 0 0
.....................................................................................AATGGCTGCTCGAAATCGC................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.....................................................................................................CGCAGAGTGCGCTGATGGGCTGGGCT............................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................CGCAGAGTGCGCTGATGGGCTGGGAT............................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................GGCTCTTTGTGTGCTCGGC............................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
..................................ATGGTTGTGGAGGCATGTGTGTG.................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................TACAAATAACCACGATTCTAC.................................................. 21 3 4 0.25 1 0 0 0 1 0
....................................................................................................TCGCAGCGTGCTTTGATGGGC.................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 1
..................................................................................................................................................................................................................ATGTGAAATCCCCGGGCTT...................... 19 3 16 0.25 4 2 1 1 0 0
..........................................................................................................AGCACGCTGATGGGTTGGGCT............................................................................................................................ 21 3 5 0.20 1 0 0 1 0 0
...........................................................................................................GCGCGCTGGTGGGCTGTGC............................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

GTTGCCTACGATAGCTGTCTGGGTGGGTTGACCGTACCAACACCTCCGTACACACACGTGGAGGGCTCACCCGAACTATGGGACATTACCGACGAGCTTTAGCGTCTCACGCGACTACCCGACCCGAGAAACACACGAGCCGGAAATAGTTACCGATATATTTATAGCTTATCAAACTTGATGTTTATGTGTGCTAAGACGGAAATACATTACACTGTAAAGGCCCGAAAACTAAAACTGTTCAAAAACGT
**********************************************************.....((((...)))).(((((((((((((.........)))))))))..))))..((((((...........))))))..................************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body
...............................................................................................................CGACCACCAGACCCGACAAA........................................................................................................................ 20 3 12 0.42 5 4 1
................................................................................................................GACTACCAGACCCGACAA......................................................................................................................... 18 2 3 0.33 1 1 0
................................................................................................................GACCACCAGACCCGACAAA........................................................................................................................ 19 3 20 0.30 6 6 0
...................TGGATGTGTTGACCGTACAA.................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4845:16322472-16322722 + der_1167 CAACGGATGCTATCGACAGACCCACCCAACTGGCATGGTTGTGGAGGCATGTGTGTGCACCTCCCGAGTGGGCTTGATACCCTGTAATGGCTGCTCGAAAT---CGCAG------------------AGTGCGCTGATGGGCTGGGCTCTTTGTGTGCT--CGGC---CT-TTATCAATGGCTATATAAAT---ATCGAATAGTTTGAACTACAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTCTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--T------GCA
droYak3 2R:7456554-7456811 + dya_485 CAACGGATGCTATCGACAGACCCACCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAA------AGTG---C---------TCTGATGGGCTGGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTATATAAAT---ATAGAATATTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTTGCC-CC--TTATGT-A--ATGTGACA--TTTCCGCTTTTCG-CTTTTGATTTTGACAACTTTT--T------GCG
droSec2 scaffold_1:7009823-7010050 - CAACGGATGCTATCGACAGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGTGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAG------------------AGCGCCGTGCTGGGCTCGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------TCACACG------------------------------------------------------------------------A--TTTCCGCT------CTTTTGATTTTGACAAGTTTT--T------GAG
droSim2 2r:10155249-10155499 - CAACGGATGCTATCGACAGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAG------------------AGCGCCGTGCTGGGCTCGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTCG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCT------CTTTTGATTTTGACAAGTTTT--T------GCG
dm3 chr2R:9492011-9492261 - CAACGGATGCTATCGACAGACCCACCCAAGTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGGGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAG------------------TGTGCTGTGCTGGGCTGGGCACTTTGTTTGTA--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCT------CTTTTGATTTTGACAAGTTTT--T------GCG
droEug1 scf7180000409462:3367834-3368090 + CAACGGATGCTATCGACAGACCCATCCGACTGGCATGGTTGTGGAGGCATGTGTCTGCACCTCACGAGTTGGCCTGATACCCTGTAATGGCTGTACGAAATTTGCACA-A--CGAAATA---G---------TTTAATGGGCTTGGCACTTTGTTTGCT--TGGTTTGCT-TTATCAATGGCTAAATAAAT---ATCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC---------------------------------------------------G-CC-TT--TAATGT-A--ATGTGACA--TTTCCGGA------CTTTTGATTTTGACAAGTTTT--TTGTTTGAAG
droBia1 scf7180000302291:666950-667198 + CAACGGGTGCTATCGCCAGTTACATCCCACCGGTATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGAGTGGGTCTGATACCCTGTAATGGCTGCTCGAAAA---CTCG-G--CTCGGTG---G---------AGCTACGGGCTGGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGAATCGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------TTTTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCT------CTTTTGATTTTAACAGGTCTC--T------GCA
droTak1 scf7180000415401:1157568-1157819 + CAACGGGTGCTATCGACAGACCCATCCGACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTCTGATACCCTGTAATGGCGGCTCGAACA---CTCG-G--CTCGGTGGCGT---------TGTAATGGGCTTGGCTCTTTGTTTGCC--CGGC---CT-TTATCGATGGCTAAATAAAT---ATCGAATGGTCTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------TTTCG-CC--T--TTATGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTC--T------GTG
droEle1 scf7180000491282:744588-744836 - CAACGGGTGCTATCGACAGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCAAAGTGGGCCTGATACCCTGTAATGGCTGCTCCAACT---CACG-G--CTCAGTG---G---------AGCAACGGGCTTGGCACTTTGTTTGAT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------TTTTC-CC--C--TTTTGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--TT-----GCG
droRho1 scf7180000780243:9819-10067 + CAACGGGTGCTATCGACAGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCCAAGTGGGCCTGATACCCTGTAATGGCGGCTCGAACT---CCCA-A--ATCAGTG---G---------TGCAACGGGCTTGGCTCTTTGTTTGCT--CGGA---CT-TTATCAATGGCTAAATAAAT---AGCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------TTTTC-CC--T--TTGTGTAA--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--T------GCA
droFic1 scf7180000454039:307377-307625 - CAATGGGTGCTATCGACAGACCCATTCCACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTTTGATACCCTGTAATGGCTGCTCAAATA---TCCA-A--CTCAATG---G---------TGTAATGGGCTGGGCTCTTTGTTTGCT--CGGC---CT-TTATCGATGGCTAAATAAAT---ATCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------TGTTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCG------CTTTTGATTTTGACAAGTTTT--TC-----GCG
droKik1 scf7180000302638:164289-164532 + TAATGGTTGCTATCGGCAGACCCACGAGAACGGAATGCAGGTGGAGGCCTGCGTGTGCACCTCTCGCCTGGGAATGATACCCTGTAATGGCTGCTCAAGGC---AGCGGCTGCACGATC---G---------TGTAATGGGCTTGGCCCTGTGCCTGCT--TGGT---GC-TTATCAGTTGCTAAATAAATTTCGTCGGATAGTTTGATCAGCAAAC--------------------------------------------------------------------------------------------ATATA-------------------------------------------------------------GT-AATATGTGACA--TTTCCTGC------TCTTTGGTTTTGACAAGT-----T------GGG
droAna3 scaffold_13266:16795039-16795284 - CAACGGGTGCTACACTCAGACTAAGGAGAATGGCATGCAGGTGGAGGCCTGTGTCTGCACCTCTAGAGTCGGACTGCAACCCTGTAATGGATCTGCAAACA---ACAA-A--CCAACAC---T---------GGTAATGGGCTGGGCGCTGTGTTTGAT--CGGC---TC-TTATCAATTGCTTAATAAAT---ATCGAATACTTTGAAC----AAT--------------------------------------------------------------------------------------------GC-----------------------------------------------TTTTG-AC--TGGCAATGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--T------GTG
droBip1 scf7180000396735:48440-48689 - CAATGGCTGTTTCACCCAGACTTATGAGAATGGCATGCAGGTGGAGGCCTGCGTCTGCACATCTAGAGTCGGCCTGATGCCCTGTAATGGCTCGGCAAACA---ATGG-A--CCAACAC---T---------TGTAATGGGCTGGGCACTGTGTTTGCT--CGGC---TC-TTATCAATTGCTTAATAAAT---ATCGAATAGTTTGAACTGACAGT--------------------------------------------------------------------------------------------GC-----------------------------------------------TTTTG-AC--TGGCAATGT-A--ATGTGACA--TTTCCTGG------CTTTTGATTTTGACAAGTTTT--T------GCG
dp5 3:14589571-14589843 + CAATGGCTGCTATCGACAGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTAGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCACTCA-A---TCGATG--CA---------TGTAATGGGCCTGGCCCTCTGTTTGCT--CAAC---GT-TTATCAATTGCTGAATAAAT---ATCGAATAGTTTGACACGGGGAG--------------------------------------------------------------------------------------------AGACACCCCCCTCCCCCCCCCCCCCACCCCT----------------------------C--GTGTGT-A--ATGTGACA--TTTCCGGA-----CTTTTTGATTTTGACAAGTTTC---------ATG
droPer2 scaffold_4:3016784-3017059 - CAATGGCTGCTATCGACAGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTCGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCACTCA-A---TCGATG--CA---------TGTAATGGGCCTGGCCCTCTGTTTGCT--CAAC---GT-TTATCAATTGCTGAATAAAT---ATCGAATAGTTTGACACGCT-CT--ACTCTGGTCTCTC--------------------------------------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCT----------------------------C--GTGTGT-A--ATGTGACA--TTTCCGGG-----CCTTTTGATTTTGACAAGTTTC---------ATG
droWil2 scf2_1100000004822:1310553-1310805 + GAATGGTTGCTATAAACAGACCTATTCGACGGGCATGCAAGTGGAGGCTTGTGTTTGCACTTCAAAAATTGGTCTAATACCCTGTAATGGGTGTTCAGATCGCAGTCA-A---GTGAAT--CAGCTTATTGGTTTTCTGGGTTTGGCATT--GTTTGTTTTC----------------TGGTTAAATAAAT---AGTTA-TGGTT---------ATT--------------------------------------------------------------------------------------------GT---TT--------------------------------A---------ATTTC-CCTCT--ATTTGA-A--ACGTGACAAGTTTCCGCGCCAAGTTGTTTGATTTTGACAAGTCGCAAT------GTA
droVir3 scaffold_12875:8070649-8070818 - CAATGGTTGTTACCTACAAACGCATTCGACGGGCATGCAGGTGGAAGCCTGCGTTTGCACCTCCAAACTGGGCCTGATGCCCTGCAATGGCAGCTTGAGTA---CGCA-G--TCTCAAC---A---------AGTTTTGGGCTTTGCCATAGCCTTGCT--CAGC---GTTTTTATGATTGTTAAATAAAC---AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:19189123-19189218 + CAATGGCTGCTACCGTGAAACCCAGGCGACGGGCATGCAGGTGGAGGCTTGTGTTTGCACCTCTAAACTGGGTCTGATACCCTGCAATTGCAGCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:1559785-1560144 - AAATGGCTGCTACCGGCAAAAGCATTCGACGGGCATGCAGGTTGAGGCCTGTGTTTGCACCTCCAAGCTGGGTCTGATACCCTGTAATAATAGCCCAACAA---CGAATG--CTCAAC----A---------ATCTCTGGGCTTGGCCATAGCACTGCT--CAGC---GTGTTAATAATTGTTAAATAAAC---AAAAAAATATATAAAT----AATGTACTC-GATATCTGTCGCACTTCCACACGTTGGCAAGTGCATTGCCCATTTGTTTAGTCAACGTCAATATAGGGGGGTTTGAGTGGGGGAGAGACTCGGCCTTTATATTGTATGTGGTACTTGGTGTGCGACTTCGCTCTTTTTC-AA--TAACCATCT-A--ATTTGACA--TTTCCGCG---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CAACGGATGCTATCGACAGACCCACCCAACTGGCATGGTTGTGGAGGCATGTGTGTGCACCTCCCGAGTGGGCTTGATACCCTGTAATGGCTGCTCGAAAT---CGCAG------------------AGTGCGCTGATGGGCTGGGCTCTTTGTGTGCT--CGGC---CT-TTATCAATGGCTATATAAAT---ATCGAATAGTTTGAACTACAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTCTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--T------GCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................ATAGTTTGAACTACAAAT--------------------------------------------------------------------------------------------ACACAC...........................................................................................................................2412.0022000000
............................................................................................................................................................................................................TTGAACTACAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTCTG-C.........................................................................2711.0011000000
................................................................................................GAAAT---CGCAG------------------AGTGCGCTGATGGGCTG......................................................................................................................................................................................................................................................................................................2711.0010000100
................................................................................................GAAAT---CGCAG------------------AGTGCGCT...............................................................................................................................................................................................................................................................................................................1811.0011000000
....................................................................................................T---CGCAG------------------AGTGCGCTGATGGGC........................................................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................................................................................CACG--------------------------------A---------TTCTG-CC--T--TTATGT-............................................................1911.0011000000
.........................................................................................................................................................................................................................................................................................................................ACG--------------------------------A---------TTCTG-CC--T--TTATGT-............................................................1811.0010000010
..................................................................................................................................................................................................ATCGAATAGTTTGAACTAC.................................................................................................................................................................................................................................1911.0011000000
...............................................................................................CGAAAT---CGCAG------------------AGTGCGCTGATGGGCT.......................................................................................................................................................................................................................................................................................................2711.0010000010
.............................................................................................CTCGAAAT---CGCAG------------------AGTGCGCTGATGGG.........................................................................................................................................................................................................................................................................................................2711.0010000100
................................................................................................................................GTGCGCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................2011.0010000010
...............................................................................................CGAAAT---CGCAG------------------AGTGCGCTGATGG..........................................................................................................................................................................................................................................................................................................2411.0011000000
.............................CTGGCATGGTTGTGGAGGCATGT..................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
........................................................................CTTGATACCCTGTAATGGCTGCT.......................................................................................................................................................................................................................................................................................................................................................2311.0010000010
....GGATGCTATCGACAGACCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................AATGGCTGCTCGAAAT---CGC...........................................................................................................................................................................................................................................................................................................................................1911.0011000000
........................................................................................................CGCAG------------------AGTGCGCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................2611.0011000000
................................................................................................................................................GGCTCTTTGTGTGCT--CGGC---..............................................................................................................................................................................................................................................................................1911.0011000000
..................................ATGGTTGTGGAGGCATGTGTGTG.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
droYak3
CAACGGATGCTATCGACAGACCCACCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAA------AGTG---C---------TCTGATGGGCTGGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTATATAAAT---ATAGAATATTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTTGCC-CC--TTATGT-A--ATGTGACA--TTTCCGCTTTTCG-CTTTTGATTTTGACAACTTTT--T------GCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................GTTGTGGAGGCATGTGTCTGC............................................................................................................................................................................................................................................................................................................................................................................................2112.00201000010000
...................................................................................................................AGTG---C---------TCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................1912.00202000000000
.............................................GGCATGTGTCTGCACCTCCCGCGT.................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
.......................................................................................................................................................................................................................AT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTTGCC-CC--...................................................................2011.00101000000000
........................................................................................................CGCAA------AGTG---C---------TCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................CAA------AGTG---C---------TCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................2211.00100000010000
............................................................................ATACCCTGTAATGGCTGCTCGAAGT---..............................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.............................CTGGTATGGTTGTGGAGGC......................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
........................................................................CTTGATACCCTGTAATGGCTGCTCGAA...................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.........CTATCGACAGACCCACCCAACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..........................CAACTGGTATGGTTGTGGAGGCAT....................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................C---------TCTGATGGGCTGGGCTCTTT..............................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................TGTGTCTGCACCTCCCGCGT.................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................GAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTT............................................................................2311.00101000000000
.........................................................................................................GCAA------AGTG---C---------TCTGATGGGCTGGGC...................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................TGGGCTGGGCTCTTTGTTTGCT--CGG..................................................................................................................................................................................................................................................................................2511.00110000000000
............................................AGGCATGTGTCTGCACCTCCC.....................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.....................................................................................................................................................................................................................AAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTTGCC-CC--TTA................................................................2511.00101000000000
....................................................GTCTGCACCTCCCGCGTGGGCTTG..........................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
.............................CTGGTATGGTTGTGGAGGCATGTG.................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................GTATGGTTGTGGAGGCATGTGTC...............................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................................................................................GCTCGAAGT---CGCAA------AGTG---C---------TCTGATGGG.........................................................................................................................................................................................................................................................................................................2811.00100000010000
.......................................................................................................................................................................................................................AT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTTGCC-C......................................................................1911.00101000000000
.......................................................................................................................................GATGGGCTGGGCTCTTTGTTTG.........................................................................................................................................................................................................................................................................................2211.00101000000000
.............................CTGGTATGGTTGTGGAGGCATGTGT................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................................................TGCTCGAAGT---CGCAA------AGTG---C---------TCTGATGG..........................................................................................................................................................................................................................................................................................................2811.00100000010000
............................................................................................GCTCGAAGT---CGCAA------AGTG---C---------TCTGATG...........................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................CGAAGT---CGCAA------AGTG---C---------TCTGATGG..........................................................................................................................................................................................................................................................................................................2411.00100000010000
....................................................GTCTGCACCTCCCGCGTGG...............................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................CGAAGT---CGCAA------AGTG---C---------TCTGATGGG.........................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................................................CCCGCGTGGGCTTGATACCCTGT.................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................................................AGT---CGCAA------AGTG---C---------TCTGATGGGCT.......................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................T---ATAGAATATTTTGAACTGCAAA..............................................................................................................................................................................................................................2311.00100000010000
.........................................................................................................GCAA------AGTG---C---------TCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................GTG---C---------TCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................................................................GTTTGCT--CGGC---CT-TTATCAATGGCT...............................................................................................................................................................................................................................................................2511.00101000000000
..................................ATGGTTGTGGAGGCATGTGTCT..............................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...................................................................................................................AGTG---C---------TCTGATGGGCTGGGCT..................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................GTGGAGGCATGTGTCTGCACCT........................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........TATCGACAGACCCACCCAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................AA------AGTG---C---------TCTGATGGGCTGGG....................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................GTTGTGGAGGCATGTGTCTGCAC..........................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.....................................................................................AATGGCTGCTCGAAGT---CGCAA------AGT................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................................................CGCAA------AGTG---C---------TCTGATGGGCTGG.....................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................TACCCTGTAATGGCTGCTCGAAGT---CGC...........................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................................................................................................ATAGAATATTTTGAACTGCAA...............................................................................................................................................................................................................................2111.00101000000000
droSec2
CAACGGATGCTATCGACAGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGTGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAG------------------AGCGCCGTGCTGGGCTCGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------TCACACG------------------------------------------------------------------------A--TTTCCGCT------CTTTTGATTTTGACAAGTTTT--T------GAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................ATAAAT---ATCGCATAGTTTGAAC....................................................................................................................................................................................................................................2211.0011000
..................................ATGGTTGTGGAGGCATGTGTC...............................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droSim2
CAACGGATGCTATCGACAGACCCATCCAACTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGCGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAG------------------AGCGCCGTGCTGGGCTCGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTCG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCT------CTTTTGATTTTGACAAGTTTT--T------GCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......TGCTATCGACAGACCCATCCAACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................................................................................................................................................................................AAAT---ATCGCATAGTTTGAACTG..................................................................................................................................................................................................................................2211.00101000000000000000
.....GATGCTATCGACAGACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................ATCCAACTGGTATGGTTGTGGAGGC......................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.........................................................................................................GCAG------------------AGCGCCGTGCTGGGCTCGGCTCTTT..............................................................................................................................................................................................................................................................................................2911.00100010000000000000
..................................................................................................................................................................................................ATCGCATAGTTTGAACTG..................................................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................................................GCTAAATAAAT---ATCGCATAGTT.........................................................................................................................................................................................................................................2211.00100010000000000000
..................................................................................................................................................................................................ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACAC...........................................................................................................................2911.00100010000000000000
...................................................................................GTAATGGCTGCTCGAAGT---CGCAG------------------.......................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
................................................................................................................................................GGCTCTTTGTTTGCT--CGGC---..............................................................................................................................................................................................................................................................................1911.00101000000000000000
.............................................................................................................................................................................................AT---ATCGCATAGTTTGAACTGCAA...............................................................................................................................................................................................................................2311.00100010000000000000
...........................................................................................................................................................................................AAAT---ATCGCATAGTTTGAACTGC.................................................................................................................................................................................................................................2311.00101000000000000000
........................................................................................................................................................................................................TAGTTTGAACTGCAAAA--------------------------------------------------------------------------------------------G................................................................................................................................18200.05100000000100000000
dm3
CAACGGATGCTATCGACAGACCCACCCAAGTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGGGTGGGCTTGATACCCTGTAATGGCTGCTCGAAGT---CGCAG------------------TGTGCTGTGCTGGGCTGGGCACTTTGTTTGTA--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGCATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACACACG--------------------------------A---------TTTTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCT------CTTTTGATTTTGACAAGTTTT--T------GCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................CAAGTGGTATGGTTGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
..................................................GTGTCTGCACCTCCCGGGTGGGCT............................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
.........................CCAAGTGGTATGGTTGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.............CGACAGACCCACCCAAGTG......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GGCATGTGTCTGCACCTCCCGGGT.................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGTGACA--TTTCCGCT------CTTTTGATTT.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AG------------------TGTGCTGTGCTGGGCT.......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................TTGTA--CGGC---CT-TTATCAAT...................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TGCTCGAAGT---CGCAG------------------TGTG...................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................AG------------------TGTGCTGTGCTGGGCTGGGC...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................ATGGCTGCTCGAAGT---CGC...........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................G------------------TGTGCTGTGCTGGGCT.......................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGGTTGTGGAGGCATGTGTC...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGTGCTGTGCTGGGCTGGGC...................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................TTGTGGAGGCATGTGTCT..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................GTATGGTTGTGGAGGCATGTGTCTGCAC..........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................GCATGTGTCTGCACCTCCCGGGTGG...............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GTGCTGTGCTGGGCTGGGCA..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................TTTGTA--CGGC---CT-TTATCAAT...................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CATGTGTCTGCACCTCCCGGGTGGGCT............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................T---CGCAG------------------TGTGCTGTGCTGGTA........................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................ATGGTTGTGGAGGCATC...................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TGGGCTGGGCACTTC..............................................................................................................................................................................................................................................................................................15150.4060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CAACGGATGCTATCGACAGACCCATCCGACTGGCATGGTTGTGGAGGCATGTGTCTGCACCTCACGAGTTGGCCTGATACCCTGTAATGGCTGTACGAAATTTGCACA-A--CGAAATA---G---------TTTAATGGGCTTGGCACTTTGTTTGCT--TGGTTTGCT-TTATCAATGGCTAAATAAAT---ATCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC---------------------------------------------------G-CC-TT--TAATGT-A--ATGTGACA--TTTCCGGA------CTTTTGATTTTGACAAGTTTT--TTGTTTGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CAACGGGTGCTATCGCCAGTTACATCCCACCGGTATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGAGTGGGTCTGATACCCTGTAATGGCTGCTCGAAAA---CTCG-G--CTCGGTG---G---------AGCTACGGGCTGGGCTCTTTGTTTGCT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGAATCGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------TTTTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCT------CTTTTGATTTTAACAGGTCTC--T------GCASizeHit CountTotal NormTotal
No Reads
droTak1
CAACGGGTGCTATCGACAGACCCATCCGACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTCTGATACCCTGTAATGGCGGCTCGAACA---CTCG-G--CTCGGTGGCGT---------TGTAATGGGCTTGGCTCTTTGTTTGCC--CGGC---CT-TTATCGATGGCTAAATAAAT---ATCGAATGGTCTGAACTGCAAAT--------------------------------------------------------------------------------------------ACG----------------------------------------------TTTCG-CC--T--TTATGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTC--T------GTGSizeHit CountTotal NormTotal
No Reads
droEle1
CAACGGGTGCTATCGACAGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCAAAGTGGGCCTGATACCCTGTAATGGCTGCTCCAACT---CACG-G--CTCAGTG---G---------AGCAACGGGCTTGGCACTTTGTTTGAT--CGGC---CT-TTATCAATGGCTAAATAAAT---ATCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------TTTTC-CC--C--TTTTGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--TT-----GCGSizeHit CountTotal NormTotal
No Reads
droRho1
CAACGGGTGCTATCGACAGACCCATGCCACGGGAATGGTGGTGGAGGCCTGTGTCTGCACCTCCCAAGTGGGCCTGATACCCTGTAATGGCGGCTCGAACT---CCCA-A--ATCAGTG---G---------TGCAACGGGCTTGGCTCTTTGTTTGCT--CGGA---CT-TTATCAATGGCTAAATAAAT---AGCGAATACTTTGAACGGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------TTTTC-CC--T--TTGTGTAA--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--T------GCASizeHit CountTotal NormTotal
No Reads
droFic1
CAATGGGTGCTATCGACAGACCCATTCCACGGGAATGGTTGTGGAGGCCTGTGTCTGCACCTCCCGCGTGGGTTTGATACCCTGTAATGGCTGCTCAAATA---TCCA-A--CTCAATG---G---------TGTAATGGGCTGGGCTCTTTGTTTGCT--CGGC---CT-TTATCGATGGCTAAATAAAT---ATCGAATAGTTTGAACTGCAAAT--------------------------------------------------------------------------------------------AC-----------------------------------------------TGTTG-CC--T--TTATGT-A--ATGTGACA--TTTCCGCG------CTTTTGATTTTGACAAGTTTT--TC-----GCGSizeHit CountTotal NormTotal
No Reads
droKik1
TAATGGTTGCTATCGGCAGACCCACGAGAACGGAATGCAGGTGGAGGCCTGCGTGTGCACCTCTCGCCTGGGAATGATACCCTGTAATGGCTGCTCAAGGC---AGCGGCTGCACGATC---G---------TGTAATGGGCTTGGCCCTGTGCCTGCT--TGGT---GC-TTATCAGTTGCTAAATAAATTTCGTCGGATAGTTTGATCAGCAAAC--------------------------------------------------------------------------------------------ATATA-------------------------------------------------------------GT-AATATGTGACA--TTTCCTGC------TCTTTGGTTTTGACAAGT-----T------GGGSizeHit CountTotal NormTotal
No Reads
droAna3
CAACGGGTGCTACACTCAGACTAAGGAGAATGGCATGCAGGTGGAGGCCTGTGTCTGCACCTCTAGAGTCGGACTGCAACCCTGTAATGGATCTGCAAACA---ACAA-A--CCAACAC---T---------GGTAATGGGCTGGGCGCTGTGTTTGAT--CGGC---TC-TTATCAATTGCTTAATAAAT---ATCGAATACTTTGAAC----AAT--------------------------------------------------------------------------------------------GC-----------------------------------------------TTTTG-AC--TGGCAATGT-A--ATGTGACA--TTTCCGGG------CTTTTGATTTTGACAAGTTTT--T------GTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................GAATGGCATGCAGGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................1812.002100010
..........................................................ACCTCTAGAGTCGGACTGCAACC.....................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................AAACA---ACAA-A--CCAACAC---T---------GGTA..............................................................................................................................................................................................................................................................................................................2211.001100000
...........................GAATGGCATGCAGGTGGAGGCCT....................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................................CTAGAGTCGGACTGCAACCCTGTAACC.............................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......................AGGAGAATGGCATGCAGGT............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..................................................GTGTCTGCACCTCTAGAGT.................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................GACTAAGGAGAATGGCATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................AGAATGGCATGCAGGTGGAGGCCT....................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.............................................GGCCTGTGTCTGCACCTCTAGAGTCGGAC............................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.....................TAAGGAGAATGGCATGCAGGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................................AGGCCTGTGTCTGCACCT........................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................................TGCAACCCTGTAATGGATCTGCAAACA---AC............................................................................................................................................................................................................................................................................................................................................2911.001010000
droBip1
CAATGGCTGTTTCACCCAGACTTATGAGAATGGCATGCAGGTGGAGGCCTGCGTCTGCACATCTAGAGTCGGCCTGATGCCCTGTAATGGCTCGGCAAACA---ATGG-A--CCAACAC---T---------TGTAATGGGCTGGGCACTGTGTTTGCT--CGGC---TC-TTATCAATTGCTTAATAAAT---ATCGAATAGTTTGAACTGACAGT--------------------------------------------------------------------------------------------GC-----------------------------------------------TTTTG-AC--TGGCAATGT-A--ATGTGACA--TTTCCTGG------CTTTTGATTTTGACAAGTTTT--T------GCGSizeHit CountTotal NormTotal
No Reads
dp5
CAATGGCTGCTATCGACAGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTAGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCACTCA-A---TCGATG--CA---------TGTAATGGGCCTGGCCCTCTGTTTGCT--CAAC---GT-TTATCAATTGCTGAATAAAT---ATCGAATAGTTTGACACGGGGAG--------------------------------------------------------------------------------------------AGACACCCCCCTCCCCCCCCCCCCCACCCCT----------------------------C--GTGTGT-A--ATGTGACA--TTTCCGGA-----CTTTTTGATTTTGACAAGTTTC---------ATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................GACCCATCCCACTGGCATGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................2213.0030300000000
...........ATCGACAGACCCATCCCACTGGCATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................2812.0020200000000
..................GACCCATCCCACTGGCATGC................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020110000000
..................................................................................................................................................................................................ATCGAATAGTTTGACACGGGGAG--------------------------------------------------------------------------------------------.................................................................................................................................2312.0020200000000
...........................................................................................................................................................................................AAAT---ATCGAATAGTTTGACACGGGGA..............................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................ACACCCCCCTCCCCCCCCC............................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GT-A--ATGTGACA--TTTCCGGA-----..................................1911.0010100000000
....................CCCATCCCACTGGCATGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................TACCCTGTAATGGCTGCTCTCCCGGCA..............................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................TATCAATTGCTGAATAAAT---ATCGA...............................................................................................................................................................................................................................................2411.0010100000000
.......................................GGTCGAGGCCTGTGTGTGCA...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................CA-A---TCGATG--CA---------TGTAATGGGCCT......................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................ATAAAT---ATCGAATAGTTTGACACGGG................................................................................................................................................................................................................................2611.0010100000000
....................................................................................................GGCACTCA-A---TCGATG--CA---------TGTAATGGGC........................................................................................................................................................................................................................................................................................................2711.0010100000000
..........................................................................TGATACCCTGTAATGGCTGCTCTCCCG.................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................................................................................................................................................................TTATCAATTGCTGAATAAAT---ATCGAATA............................................................................................................................................................................................................................................2811.0010100000000
.AATGGCTGCTATCGACAGACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................GGCCTGGCCCTCTGTTTGCT--C....................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................CGAATAGTTTGACACGGGG...............................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................ATCGAATAGTTTGACACGG.................................................................................................................................................................................................................................1911.0010100000000
.......................................GGTCGAGGCCTGTGTGTGCAC..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................CTGATACCCTGTAATGGCTG.........................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................GGCCTGGCCCTCTGTTTGC........................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................CGAATAGTTTGACACGGG................................................................................................................................................................................................................................1811.0010100000000
droPer2
CAATGGCTGCTATCGACAGACCCATCCCACTGGCATGCAGGTCGAGGCCTGTGTGTGCACCTCCCGAGTCGGTCTGATACCCTGTAATGGCTGCTCTCCCGGCACTCA-A---TCGATG--CA---------TGTAATGGGCCTGGCCCTCTGTTTGCT--CAAC---GT-TTATCAATTGCTGAATAAAT---ATCGAATAGTTTGACACGCT-CT--ACTCTGGTCTCTC--------------------------------------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCT----------------------------C--GTGTGT-A--ATGTGACA--TTTCCGGG-----CCTTTTGATTTTGACAAGTTTC---------ATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................CTCA-A---TCGATG--CA---------TGTAATGGGC........................................................................................................................................................................................................................................................................................................2311.001010000
......................................................GTGCACCTCCCGAGTCGGT.............................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................................GGTCGAGGCCTGTGTGTGCACC.........................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................................................................................................AATTGCTGAATAAAT---ATCGA...............................................................................................................................................................................................................................................2011.001010000
..................................................GTGTGTGCACCTCCCGAGTCGGT.............................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droWil2
GAATGGTTGCTATAAACAGACCTATTCGACGGGCATGCAAGTGGAGGCTTGTGTTTGCACTTCAAAAATTGGTCTAATACCCTGTAATGGGTGTTCAGATCGCAGTCA-A---GTGAAT--CAGCTTATTGGTTTTCTGGGTTTGGCATT--GTTTGTTTTC----------------TGGTTAAATAAAT---AGTTA-TGGTT---------ATT--------------------------------------------------------------------------------------------GT---TT--------------------------------A---------ATTTC-CCTCT--ATTTGA-A--ACGTGACAAGTTTCCGCGCCAAGTTGTTTGATTTTGACAAGTCGCAAT------GTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................GTTCAGATCGCAGTCA-A---GTGA.................................................................................................................................................................................................................................................................................................................................2115.00520300
............................................................................................GTTCAGATCGCAGTCA-A---GT...................................................................................................................................................................................................................................................................................................................................1913.00300300
............................................................................................GTTCAGATCGCAGTCA-A---GTG..................................................................................................................................................................................................................................................................................................................................2012.00200200
.......................ATTCGACGGGCATGCAAGT............................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
..................................................................AATTGGTCTAATACCCTGTAATGGGT..........................................................................................................................................................................................................................................................................................................................................................2611.00101000
........................................................................................................................................CTGGGTTTGGCATT--GTTTGTTTT.....................................................................................................................................................................................................................................................................................2311.00101000
......................................AAGTGGAGGCTTGTGTTTGCA...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................................................................................................................TATTGGTTTTCTGGGTTTGGCATT--GT............................................................................................................................................................................................................................................................................................2611.00100100
..............AACAGACCTATTCGACGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
................................................................AAAATTGGTCTAATACCCTGTAATGGGT..........................................................................................................................................................................................................................................................................................................................................................2811.00101000
........................................GTGGAGGCTTGTGTTTGCACT.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
......................................................................................................................................TTCTGGGTTTGGCATT--GTTTGTTTTC----------------T...................................................................................................................................................................................................................................................................2711.00100100
..........................CGACGGGCATGCAAGTGGAGGCTTGTGT................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
................CAGACCTATTCGACGGGCATGCAAGT............................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
................CAGACCTATTCGACGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.......................ATTCGACGGGCATGCAAGTGGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.....................................................................................................................AT--CAGCTTATTGGTTTTCTGGGTTTGG....................................................................................................................................................................................................................................................................................................2711.00101000
..................GACCTATTCGACGGGCATGCAAGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...............................................................................CCCTGTAATGGGTGTTCAGATC.................................................................................................................................................................................................................................................................................................................................................2211.00101000
..................GACCTATTCGACGGGCATGC................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..............................................................................................TCAGATCGCAGTCA-A---GTGAAT--.............................................................................................................................................................................................................................................................................................................................2111.00100100
..........................CGACGGGCATGCAAGTGGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..................................................................................TGTAATGGGTGTTCAGATCGC...............................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................................................................................TCAGATCGCAGTCA-A---GTGAA................................................................................................................................................................................................................................................................................................................................2011.00100100
........................TTCGACGGGCATGCAAGTGGAGGCTT....................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.................................................................................................................................................................C----------------TGGTTAAATAAAT---AGTTA-TGGTT---------A...............................................................................................................................................................................................................................2511.00100010
droVir3
CAATGGTTGTTACCTACAAACGCATTCGACGGGCATGCAGGTGGAAGCCTGCGTTTGCACCTCCAAACTGGGCCTGATGCCCTGCAATGGCAGCTTGAGTA---CGCA-G--TCTCAAC---A---------AGTTTTGGGCTTTGCCATAGCCTTGCT--CAGC---GTTTTTATGATTGTTAAATAAAC---AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................TTTGCACCTCCAAACTGGGC.............................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
..........................CGACGGGCATGCAGGTGGAAGCCTG...................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................GCCTGCGTTTGCACCTCCAAACTGGG..............................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCTCAAC---A---------AGTTTTGGGCTTG.....................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..............................GGGCATGCAGGTGGAAGC......................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
CAATGGCTGCTACCGTGAAACCCAGGCGACGGGCATGCAGGTGGAGGCTTGTGTTTGCACCTCTAAACTGGGTCTGATACCCTGCAATTGCAGCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................GGTCTGATACCCTGCAATTGCAGCC.......................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................AAACCCAGGCGACGGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................................................TGTTTGCACCTCTAAACTGGGTC............................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
AAATGGCTGCTACCGGCAAAAGCATTCGACGGGCATGCAGGTTGAGGCCTGTGTTTGCACCTCCAAGCTGGGTCTGATACCCTGTAATAATAGCCCAACAA---CGAATG--CTCAAC----A---------ATCTCTGGGCTTGGCCATAGCACTGCT--CAGC---GTGTTAATAATTGTTAAATAAAC---AAAAAAATATATAAAT----AATGTACTC-GATATCTGTCGCACTTCCACACGTTGGCAAGTGCATTGCCCATTTGTTTAGTCAACGTCAATATAGGGGGGTTTGAGTGGGGGAGAGACTCGGCCTTTATATTGTATGTGGTACTTGGTGTGCGACTTCGCTCTTTTTC-AA--TAACCATCT-A--ATTTGACA--TTTCCGCG---------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:31 PM