ID:

der_1149

 Coordinate:

scaffold_4845:15078113-15078263 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -7.1 -6.7

Flybase annnotation

CDS [Dere\GG20488-cds]; exon [dere_GLEANR_5281:2]; intron [Dere\GG20488-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCCTGTATGAGCTGGCCCAAAATCAGGACATTCAGGATCAACTAAGGGCGGAGATCAACAATGTTCTGAGCCAGCACAACAACGAGTTTACTTACGAGGGAATCAAACAGATGAAGTACCTGGAACAGGTCGTCATGGGTGAGTGAAATCACGCAATATCACAAATCCATGCCTAATTATGATTCTTATTTTGTGCGACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTTACGCGTATGACCCAG
*******************************************************.........((((..((((.((..((....((((...............))))...))..))..))))..)))).************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 M055
female body
 M057
embryo
 V040
embryo
 V108
head
 GSM1528801
follicle cells
.............................ATTCAGGATCAACTAAGGGCGGAGAT.................................................................................................................................................................................................... 26 0 1 5.00 5 4 0 0 0 0 1
..........................GACATTCAGGATCAACTAAGGGC.......................................................................................................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
.......................................................CAACAATGTTCTGAGCCAGC................................................................................................................................................................................ 20 0 1 3.00 3 0 1 1 1 0 0
..................................................................................................................................CGTCATGGGTTACTGAATTCA.................................................................................................... 21 3 2 3.00 6 2 4 0 0 0 0
............................CATTCAGGATCAACTAAGGGC.......................................................................................................................................................................................................... 21 0 1 3.00 3 1 1 1 0 0 0
.............................................................................................................GATGAAGTACCTGGAACAGGT......................................................................................................................... 21 0 1 3.00 3 2 0 0 1 0 0
.......................................................CAACAATGTTCTGAGCCAGCA............................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0
................................CAGGATCAACTAAGGGCGGAG...................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
........................................................AACAATGTTCTGAGCCAGC................................................................................................................................................................................ 19 0 1 2.00 2 1 0 1 0 0 0
.............................ATTCAGGATCAACTAAGGGCGGA....................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0
................................................................................................................GAAGTACCTGGAACAGGTC........................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0
..............................................................................................................ATGAAGTACCTGGAACAGGT......................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................................................................................................................ATCCAGTTCTGGCGCATCTTACGC........... 24 0 1 2.00 2 0 0 2 0 0 0
............................................................................CAACAACGAGTTTACTTACGAGGGAATC................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
...............................TCAGGATCAACTAAGGGCGGAGAT.................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
.....................................................ATAAACAATGTTCTGAGCCAGC................................................................................................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
..........................GACATTCAGGATCAACTAAGGGCG......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.............GGCCCAAAATCAGGACATTCAGGAT..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0
.............................................GGGCGGAGATCAACAATGTTCTGAGC.................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................CATGGAAACCCTTCGCAAGTATCCA.............................. 25 3 1 1.00 1 0 0 0 1 0 0
.......................................................CAACAATGTTCTGAGCCAGCAC.............................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0
.....................................TCAACTAAGGGCGGAGATCAACAATG............................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
..............GCCCAAAATCAGGACATTCAGGAT..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.............................ATTCAGGATCAACTAAGGGCGG........................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................AAACAGATGAAGTACCTGGAACAGGT......................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0
...........................................................................................................................................................................................................ACCCTTCGCAAGTATCCAGTTCTGGC...................... 26 0 1 1.00 1 0 0 1 0 0 0
.......................................................CAACAATGTTCTGAGCCAGCACAACA.......................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.....................................TCAACTAAGGGCGGAGATC................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
....................................ATCAACTAAGGGCGGTGATC................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GAGGGAATCAAACAGATG.......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................ACTTACGAGGGAATCAAACAGAT........................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
................................................................TCTGAGCCAGCACAACAACGAGT.................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.............GGCCCAAAATCAGGACATTCAGG....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
............................TATTCAGGATCAACTTAGGGCGGAGA..................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 1
........GAGCTGGCCCAAAATCAGGA............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
..CTGTATGAGCTGGCCCAAAAT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
............................................................................CAACAACGAGCTTACTTACGA.......................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.....................................................ATCAACAATGTTCTGAGCCA.................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GTATCCAGTTCTGGCGCATCTTAC............. 24 0 1 1.00 1 0 0 1 0 0 0
....................................................GATCAACAATGTTCTGAGC.................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.........................................................ACAATGTTCTGAGCCAGCA............................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.............................ATTCAGGATCAACTAAGGGCGGAG...................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..............................................................GTTCTGAGCCAGCACAACAACGAGT.................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................AAGTACCTGGAACAGGTCGTCATGG................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
........................................................................AGCACAACAACGAGTTTACTTACGAG......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................TCAAACAGATGAAGTACCTGGAACAGGT......................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
....................................ATCAACTAAGGGCGGAGATCAACAAT............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................AACAGATGAAGTACCTGGAACAGGTC........................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0
......................................CAACTAAGGGCGGAGATCAAC................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0
..............................................................................................................ATGAAGTACCTGGAACAGGTC........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
......................................CAACTAAGGGCGGAGATCAACAATGT........................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.....................................................ATCAACAATGTTCTGAGCCATC................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
........................................................AACAATGTTCTGAGCCAGCA............................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
............................................................................................................AGATGAAGTACCTGGAACAGGTCGTCA.................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0
...............................................................................CAACGAGTTTACTTACGAGG........................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................ATCAAACAGATGAAGTACCTGGAACA............................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................CCTGGAACAGGACGTCATAGA................................................................................................................ 21 3 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................TGGAAACCCTTCGCAAGTATC................................ 21 2 1 1.00 1 0 0 0 0 1 0
............................................................ATGTTCTGAGCCAGCACAACAACG....................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
........................................................AACAATGTTCTGAGCCAGCACAACAAC........................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................CAAACAGATGAAGTACCT.................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0
...............................TCAGGATCAACTAAGGGCGGAG...................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................ATTCAGGATCAACTAAGGGC.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0
........................................................................................................AAACAGATGAAGTACCTGGAACAGGTCG....................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.............................................................................AACAACGAGTTTACTTACGAGGGAATC................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.....................................................ATCAACAATGTTCTGAGCCAGCAC.............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................AACGAGTTTACTTACGAGGGA...................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.............GTCCCAAAATCAGGACATTCAGGATC.................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
.......................................................CAACAATGTTCTGAGCCAGCACAAC........................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
......................TCAGGACATTCAGGATCAACTAAGGGC.......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0
................................................................TCTGAGCCAGCACAACAACGAGTT................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
..............................TTCAGGATCAACTAAGGGCGGAG...................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
.............................................................................AACAACGAGTTTACTTACGA.......................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..........................................................................CACAACAACGAGTTTACTTACGAGG........................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0
.......................................................CAACAATGTTCTGAGCCAGCACAACAAC........................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................CAAACAGATGAAGTACCTGGAACAGGT......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................ACAACAACGAGTTTACTTACGAGG........................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................GTCATGGGTTACTGAATTCA.................................................................................................... 20 3 5 0.60 3 1 2 0 0 0 0
..CTGTATGAGCTGGCCAAAA...................................................................................................................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 1 0
........................................................................................................................TGGAACAGGACGTCATAG................................................................................................................. 18 2 2 0.50 1 0 1 0 0 0 0
......................................................................................................................CTTGGAACAGGACGTCATAG................................................................................................................. 20 3 7 0.43 3 0 2 0 1 0 0
.......................................................................................................................TTGGAACAGGACGTCATAG................................................................................................................. 19 3 15 0.20 3 1 2 0 0 0 0
..................................................................................................................................CGTCATGGGTTACTGAATTC..................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0
..............................................AGCGGAGATCATCAATGT........................................................................................................................................................................................... 18 2 6 0.17 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................TTCTGGCGCATGATATGCGT......... 20 3 12 0.08 1 0 0 0 0 1 0
...................................................................GAACCAACACAACTACGAG..................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................CGTCTTGGGTTAGTGAATT...................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GGGACATACTCGACCGGGTTTTAGTCCTGTAAGTCCTAGTTGATTCCCGCCTCTAGTTGTTACAAGACTCGGTCGTGTTGTTGCTCAAATGAATGCTCCCTTAGTTTGTCTACTTCATGGACCTTGTCCAGCAGTACCCACTCACTTTAGTGCGTTATAGTGTTTAGGTACGGATTAATACTAAGAATAAAACACGCTGTCTTTGGGAAGCGTTCATAGGTCAAGACCGCGTAGAATGCGCATACTGGGTC
*************************************************************************************************************************.........((((..((((.((..((....((((...............))))...))..))..))))..)))).******************************************************* 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
.GGAAATACTCGTCCGGGTTTG..................................................................................................................................................................................................................................... 21 3 3 0.33 1 1
............................................................................................................TCTATTTCATTGACCTTG............................................................................................................................. 18 2 12 0.08 1 1
....................TTAGTACCGTAAGTCCTTG.................................................................................................................................................................................................................... 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4845:15078063-15078313 - der_1149 CCCTGTATGAGCTGGCCCAAAATCAGGACATTCAGGATCAACTAAGGGCGGAGATCAACAATGTTCTGAGCCAGCACAA---CAACGAGTTTACTTACGAGGGAATCAAACAGATGAAGTACCTGGAACAGGTCGTCATGGGTGAGTGAAATCACGC------------------AA----------------------------------------------TA-TC-----------ACA----------AATCCATGCCTAATTA--TGATTCTTATTTTG---------TGCGACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTTACGCGTATGACCCAG
droYak3 2R:10702007-10702257 + CCCTGTACGAGCTGGCCCGCAATCAGGACATTCAGGATCAGCTTAGGGCGGAGATCAACAAGGTTCTGGGCAAGCACAA---CAACGAATTCACTTATGAGGGAATCAAAGAGATGAAGTACCTGGAACGGGTCGTCATGGGTGAGTGAAATTCCGC------------------AA----------------------------------------------TG-AT-----------ACA----------AATCATTACCTCAAAA--TTTTCCCTATTTTA---------TGCGATAGAAACCCTTCGCATGTATCCGGTTCTGGCGCATCTTACAAGAATGACTGAG
droSec2 scaffold_1:8286858-8287107 + CCCTGTACGAGCTGGCCCGCAATCAGGATATTCAGGATCAACTTCGAGAGGAGATCAACAGTGTTCTGGGCAAGCACAA---CAACGAGTTTACCTACGAGGGCATCAAGGAGATGAAGTATCTGGAGCAAGTTGTCATGGGTGAGTAAAATCACAA------------------GA----------------------------------------------GG-TT-----------ACA----------CAACTTTACCTAAATA--TT-TTCCCATTTTA---------TGCAACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACCCAG
droSim2 2r:11465766-11466016 + CCCTGTACGAGCTGGCCCGCAATCAGGATATTCAAGATCAACTTCGAGAGGAGATCAACAGTGTTCTGGGCAAGCACAA---CAACGAGTTTACCTACGAGGGCATCAAGGAGATGAAGTATCTAGAGCAAGTTGTCATGGGTGAGTAAAATCCCAC------------------AT----------------------------------------------GG-AT-----------ACA----------GAACTTTAACTAAATA--CTTTCCCTATTTTG---------CGCAACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACCCAG
dm3 chr2R:10764315-10764567 + CCCTGTACGAGCTCGCCCTCGATCAGGATATTCAGGATCAACTTAGGGCGGAGATCAACAATGTTCTGAGCAAACACAA---CAACGAGTTTACCTACGAGGGAATCAAAGAGATGAAGTATCTGGAGCAGGTCGTCATGGGTAAGTAAAATCCCAA------------------GA----------------------------------------------GG-TT-----------GCA----------TAACTTTACCTAAAGGGCCTTTTCCCATTTTA---------CGCCACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACCCAG
droEug1 scf7180000409462:390856-391110 - CTCTTTACGAACTAGCCCAGAACCAGGATGTTCAGGATAAACTCAGGGACGAGGTTAACCATGTTCTGGCCAAGCACAA---TAACGAGTTTACTTACGAGGCCATCAAGGAGATGAAATACCTGGAGCAGGTCGTCATGGGTAATAT----CACAGAAAGCTTTGATATATATA-A--TTAA---------------------------------TA---------------------------------T---TATTAACTAA--------TCCATATTTAA---------TTCCATAGAAACCCTTCGCAAGTACCCAGTACTGGCTCATCTTACGAGGATGACCCAG
droBia1 scf7180000302292:890954-891219 + CCCTCTATGAACTGGCTCGTAACCAGGATATTCAGGATAAGGTCAGGAAGGAGATCTATGATGTTCTGGGCAAGCACAA---CCACCAGTTCACCTACGAGGGAATCAAGGAGATGAAGTACCTGGAGCAGGTTGTGATGGGTAAGTAACTTAATGT------------------GGTATTATTATTTTATACCTAATAACTTGTAAGCAA-ATAATAATCAT--------------------------------------------------------------TT-CGTTTGCTTCCAGAAACCCTCCGCAAGTATCCAGTTTTGGCTCATCTTACGAGAATGACCGGG
droTak1 scf7180000415260:171455-171703 - CCCTCTATGAACTGGCCCGCAACCAGGATGTTCAGGATTCACTCAGGGAGGAGATTAAAAATGTTCTGGGCAAGCACAA---CAACGAGTTCACCTACGAGGGAATCAAAGAGATGAAGTATCTGGAGCAGGTTGTGATGGGTACGTTTCTTGT----------------GCTTATG--TTCT----------------CT-CTATAACAA-CTATTAATCAT--------------------------------------------------------------TC-CTTCTGCTTCCAGAAACCCTTCGCAAGTACCCCGTTTTGGCGCATCTAACGAGAATGACCGAT
droEle1 scf7180000491214:3605610-3605859 + CTCTCTACGAGTTGGCCCGCAATCAGGGTGTTCAGGATAGACTCAGAGAGGAGATTAACAATGTTCTAGAAAAGCACAA---CAACGAGTTCACCTACGAGGGAATCAAGGAAATGAAGTATCTGGAGCAGGTCGTCATGGGTGAGTTTTCTAAA---------------GTTTA-A--CTGT----------------GTTCTTAAGTAA-AAATTGACTAT--------------------------------------------------------------TG-CTTTTGCTTACAGAAACCCTTCGAAAGTATCCCGTGCTGGCACATCTTACGAGAATGACCGAG
droRho1 scf7180000777223:3153-3407 + CTCTCTACGAGCTGGCTCGCAATCAGGATGTTCAGGATAAACTCAGGGAGGAGATAAACCATGTTCTGGGCAAGCACAA---TAACGAGTTCACCTACGAGGGAGTCAAGGAAATGAAGTATCTGGAACAGGTAGTAATGGGTGAGTCATCTGCAAA-----------C-ACTTA-A--TTGG----------------GTT-----ATAA-TAATTAA-----------------------------------------TCCAAGCCGC------CTTTTTAA---------CTCCTTAGAAACTCTTCGAAAGTACCCAGTGCTGGCTCATCTTACGAGAATGACACAG
droFic1 scf7180000453809:467339-467583 + CACTTTATGAACTGGCCCAGAACCAGGAGGTCCAGGATAAAGTCCGCGAAGAGATAGCCAGTGTTTTGGCCAAGCACAA---TAATGAATTCACCTACGAAGGTATCAAGGAGATGAAATATCTGGAGCAGGTCGTCATGGGTAAGTACTTAC-------------------TTTTA--TTGT----------------CT-ATTGATTAG-TTATTAA-------------------------------------------------------TTCCTTTTCA---------ACCCTCAGAAACCCTTCGCAAATATCCAGTTCTTGCGCATCTAACGAGAATAACTGAC
droKik1 scf7180000302277:309282-309528 - GCCTGTACGAGCTAGCTCTGCAGCAGGACATTCAGGATCGAGTAAGGGAAGAGATTAAAAGTGTCCTCAGCAAGACGGAGGGAGGAGAGATCTCTTATGATGCAGTAGCCGAAATGACCTACCTGGAACAGGTGCTGGCTGGTAAGTGAGATGTTAT------------------CC---------------------------CAGTCAA-A----------GG-AT------------------------AAACTTTAACT------------CAGATATT----------ATCCTCAGAAACCCTTCGAAAGCATCCCATTCTTCCCCACCTCATAAGGGAGACC-AG
droAna3 scaffold_13266:2552935-2553178 - CACTGTATGAACTGGCCCAGAATCTGGACATTCAGGATAAATTGCGACAAGAGATCAACCAAGTATTGGCCAAGCACAA---CAACGAGTTCACCTACGAGGGCATCAAGGAGATGAAGTATCTGGAACAGGTCGTAATGGGTGAGTTGTAAT-----------------ATTTG-A--TTGT----------------TT-TTGAAACAA-AAAGTAACCAA-----------------------------------------------------------------C-TTTTCCATCAGAAACTCTTCGGAAGTATCCAGTTTTGGCGCATCTTACGAGGAAAACCGAG
droBip1 scf7180000396759:1614843-1615090 - CTCTCTACGAATTGGCTCAGAATCAGGATGTTCAGGACAAACTGCGACAGGAGATCAACCAAGTATTGGCCAAGCACAA---CAACGAGTTTACCTACGAGGGCATCAAGGAGATGAAGTATCTGGAACAGGTGGTAATGGGTGAGTTGAAGT-----------------ATTTG-G--TTAT----------------TT-TTAAAAAAATATACTGACAAT--------------------------------------------------------------ATTA-TTTTCCATCAGAAACCCTTCGGAAGTTCCCTGTCCTGGCACATCTTACCAGAAAAACTGAA
dp5 3:13267737-13267987 + CGCTCTATGAGCTGGCGCAGAACCAGGACACTCAAGATAAGCTGAGAAATGAAATCAACGATGTTCTGGCCAAGCACAA---CAATCAGTTCACCTACGAGGGTATTAAAGAAATGAAATATCTGGAGCAGGTGGTAATGGGTGAGTACT----CGT------------------GA----------------------------------------------GGATTACATTTTGTTTCTTTTTCTCTAAT----------------------------ATTTTATAA-TTCCCTTCCAGAAACTCTTCGGAAGTACCCGGTTCTTGCTCATCTAACGCGAAAGACACAG
droPer2 scaffold_2:8354391-8354641 - CGCTCTATGAGCTGGCGCAGAACCAGGACACTCAAGATAAGCTGAGAAATGAAATCAACGATGTTCTGGCAAAGCACAA---CAATCAGTTCACCTACGAGGGTATCAAAGAAATGAAATATCTGGAGCAGGTGGTAATGGGTGAGTATT----CGT------------------GA----------------------------------------------GGATTACATTTTGTTTCTTTTTCTCTAAT----------------------------ATTTTACAA-TTCCCTTTCAGAAACTCTTCGGAAGTACCCGGTTCTTGCTCATCTAACGCGAAAGACACAG
droWil2 scf2_1100000004513:3002924-3003180 - CCCTCTACGAGTTGGCTCAGCATCAGGATATACAAAGCAAAATAAGAAAGGAAGTCAACGAAGTTTTGGCTAAGCACAG---CAATGAATTCACCTATGATAGTATCAAGCAAATGAAATATCTCGAGCAAAGTGTTATGGGTAAGTGATTACCAAG--AAAATCAAAC-TCTTT-G--TTGG------------------------------------------------------GACTATTTATCGAAT----------------------ATATGTA---------TTTCTCCACAGAAACTCTACGAAAATATCCTGTTCTGGCTCATCTAACACGTCTGACCAAC
droVir3 scaffold_12875:9617300-9617553 + dvi_5857 CCCTGTACGAACTGGCCCAGCATCAGGACATCCAGGACAAGTTGAGAGCGGAAATAAACGATGTGCTTGGCAAGCACAA---CAATAAATACTCTTACGACAATGTTAAGCAAATGGAATATCTGGAGCAGGTTGTCATGGGTAACATAT----TAT------------------AC----------------------------------------------AG---CCCGTTTGTTTCTGTA----------T--TTCCCTAATTC--TAAACTTAATAC---------TTCAATATAGAAACTCTTCGCAAATATCCCGTGTTGGCCCATCTGACACGCATGGCCATC
droMoj3 scaffold_6496:17479270-17479518 - CTCTCTATGAGCTGGCCCTGCATCAGGACATACAGAACAAGCTGAGAGCGGAAATCAACGAGGTGTTGAGTAGGTACAA---CAATGAGTACACCTACGATAATGTGAAGGAAATGAAATATCTGGAACAAGTTGTCATGGGTAAGTAAAATAATAT------------------AT----------------------------------------------AT-TT-----------CTA----------TAA--TAACCTGAATA--CAATTGGAATATTT---------TAAAGCAGAAACTCTACGAAAGTACCCCGTGCTACCCCATCTTACCCGAAAGGCCATC
droGri2 scaffold_15245:2828075-2828323 + CCCTATACGAGCTGGCCCAGAATCAGGATGTGCAAGACAAACTGAGAAAGGAAATTCACGAAGTGCTTGCCAAGCATAA---TAATGTGTACTCTTACGACAATATTAAAGAAATGGCATACCTCGAACAGGTTGTGATGGGTAAGTTATAAGAGCC----------------ACAT----TC----------------CT-TTGTATATGCATTGTA---------------------------------T-------------------------TATTT---CG-TGTTCCCATTTAGAAACGCTACGCAAATATCCCGTGCTGGCTCATCTTACACGCAAGACCATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CCCTGTATGAGCTGGCCCAAAATCAGGACATTCAGGATCAACTAAGGGCGGAGATCAACAATGTTCTGAGCCAGCACAA---CAACGAGTTTACTTACGAGGGAATCAAACAGATGAAGTACCTGGAACAGGTCGTCATGGGTGAGTGAAATCACGC------------------AA----------------------------------------------TA-TC-----------ACA----------AATCCATGCCTAATTA--TGATTCTTATTTTG---------TGCGACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTTACGCGTATGACCCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................ATTCAGGATCAACTAAGGGCGGAGAT........................................................................................................................................................................................................................................................................................................2615.0050000401
..........................GACATTCAGGATCAACTAAGGGC..............................................................................................................................................................................................................................................................................................................2313.0030000300
.......................................................CAACAATGTTCTGAGCCAGC....................................................................................................................................................................................................................................................................................2013.0031101000
............................CATTCAGGATCAACTAAGGGC..............................................................................................................................................................................................................................................................................................................2113.0031100100
................................................................................................................GATGAAGTACCTGGAACAGGT..........................................................................................................................................................................................................................2113.0030001200
.......................................................CAACAATGTTCTGAGCCAGCA...................................................................................................................................................................................................................................................................................2113.0030000300
................................CAGGATCAACTAAGGGCGGAG..........................................................................................................................................................................................................................................................................................................2112.0020000200
........................................................AACAATGTTCTGAGCCAGC....................................................................................................................................................................................................................................................................................1912.0020100100
.............................ATTCAGGATCAACTAAGGGCGGA...........................................................................................................................................................................................................................................................................................................2312.0020000200
...................................................................................................................GAAGTACCTGGAACAGGTC.........................................................................................................................................................................................................................1912.0022000000
.................................................................................................................ATGAAGTACCTGGAACAGGT..........................................................................................................................................................................................................................2012.0020000200
............................................................................................................................................................................................................................................................................................................................ATCCAGTTCTGGCGCATCTTACGC...........2412.0020200000
............................................................................CAA---CAACGAGTTTACTTACGAGGGAATC....................................................................................................................................................................................................................................................2812.0020000200
...............................TCAGGATCAACTAAGGGCGGAGAT........................................................................................................................................................................................................................................................................................................2411.0010100000
..........................GACATTCAGGATCAACTAAGGGCG.............................................................................................................................................................................................................................................................................................................2411.0010000100
.............GGCCCAAAATCAGGACATTCAGGAT.........................................................................................................................................................................................................................................................................................................................2511.0010001000
.............................................GGGCGGAGATCAACAATGTTCTGAGC........................................................................................................................................................................................................................................................................................2611.0011000000
.......................................................CAACAATGTTCTGAGCCAGCAC..................................................................................................................................................................................................................................................................................2211.0010100000
.....................................TCAACTAAGGGCGGAGATCAACAATG................................................................................................................................................................................................................................................................................................2611.0010000100
..............GCCCAAAATCAGGACATTCAGGAT.........................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................ATTCAGGATCAACTAAGGGCGG............................................................................................................................................................................................................................................................................................................2211.0010000100
...........................................................................................................AAACAGATGAAGTACCTGGAACAGGT..........................................................................................................................................................................................................................2611.0010001000
...............................................................................................................................................................................................................................................................................................................ACCCTTCGCAAGTATCCAGTTCTGGC......................2611.0010100000
.......................................................CAACAATGTTCTGAGCCAGCACAA---CA...........................................................................................................................................................................................................................................................................2611.0011000000
.....................................TCAACTAAGGGCGGAGATC.......................................................................................................................................................................................................................................................................................................1911.0010000100
..................................................................................................GAGGGAATCAAACAGATG...........................................................................................................................................................................................................................................1811.0010000100
............................................................................................ACTTACGAGGGAATCAAACAGAT............................................................................................................................................................................................................................................2311.0011000000
................................................................TCTGAGCCAGCACAA---CAACGAGT.....................................................................................................................................................................................................................................................................2311.0010000100
.............GGCCCAAAATCAGGACATTCAGG...........................................................................................................................................................................................................................................................................................................................2311.0011000000
........GAGCTGGCCCAAAATCAGGA...................................................................................................................................................................................................................................................................................................................................2011.0010001000
..CTGTATGAGCTGGCCCAAAAT........................................................................................................................................................................................................................................................................................................................................2111.0010000100
.....................................................ATCAACAATGTTCTGAGCCA......................................................................................................................................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................GTATCCAGTTCTGGCGCATCTTAC.............2411.0010100000
....................................................GATCAACAATGTTCTGAGC........................................................................................................................................................................................................................................................................................1911.0010000100
.........................................................ACAATGTTCTGAGCCAGCA...................................................................................................................................................................................................................................................................................1911.0010000100
.............................ATTCAGGATCAACTAAGGGCGGAG..........................................................................................................................................................................................................................................................................................................2411.0010000100
..............................................................GTTCTGAGCCAGCACAA---CAACGAGT.....................................................................................................................................................................................................................................................................2511.0010000100
....................................................................................................................AAGTACCTGGAACAGGTCGTCATGG..................................................................................................................................................................................................................2511.0010000100
........................................................................AGCACAA---CAACGAGTTTACTTACGAG..........................................................................................................................................................................................................................................................2611.0010000100
.........................................................................................................TCAAACAGATGAAGTACCTGGAACAGGT..........................................................................................................................................................................................................................2811.0010000100
....................................ATCAACTAAGGGCGGAGATCAACAAT.................................................................................................................................................................................................................................................................................................2611.0010000100
............................................................................................................AACAGATGAAGTACCTGGAACAGGTC.........................................................................................................................................................................................................................2611.0010001000
......................................CAACTAAGGGCGGAGATCAAC....................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................ATGAAGTACCTGGAACAGGTC.........................................................................................................................................................................................................................2111.0010000100
......................................CAACTAAGGGCGGAGATCAACAATGT...............................................................................................................................................................................................................................................................................................2611.0010000100
........................................................AACAATGTTCTGAGCCAGCA...................................................................................................................................................................................................................................................................................2011.0010001000
...............................................................................................................AGATGAAGTACCTGGAACAGGTCGTCA.....................................................................................................................................................................................................................2711.0010000010
..................................................................................CAACGAGTTTACTTACGAGG.........................................................................................................................................................................................................................................................2011.0011000000
........................................................................................................ATCAAACAGATGAAGTACCTGGAACA.............................................................................................................................................................................................................................2611.0011000000
............................................................ATGTTCTGAGCCAGCACAA---CAACG........................................................................................................................................................................................................................................................................2411.0010000100
........................................................AACAATGTTCTGAGCCAGCACAA---CAAC.........................................................................................................................................................................................................................................................................2711.0011000000
..........................................................................................................CAAACAGATGAAGTACCT...................................................................................................................................................................................................................................1811.0010001000
...............................TCAGGATCAACTAAGGGCGGAG..........................................................................................................................................................................................................................................................................................................2211.0010000100
.............................ATTCAGGATCAACTAAGGGC..............................................................................................................................................................................................................................................................................................................2011.0010000010
...........................................................................................................AAACAGATGAAGTACCTGGAACAGGTCG........................................................................................................................................................................................................................2811.0010000100
.............................................................................AA---CAACGAGTTTACTTACGAGGGAATC....................................................................................................................................................................................................................................................2711.0010000100
.....................................................ATCAACAATGTTCTGAGCCAGCAC..................................................................................................................................................................................................................................................................................2411.0010000100
...................................................................................AACGAGTTTACTTACGAGGGA.......................................................................................................................................................................................................................................................2111.0010000100
.......................................................CAACAATGTTCTGAGCCAGCACAA---C............................................................................................................................................................................................................................................................................2511.0010100000
......................TCAGGACATTCAGGATCAACTAAGGGC..............................................................................................................................................................................................................................................................................................................2711.0010100000
................................................................TCTGAGCCAGCACAA---CAACGAGTT....................................................................................................................................................................................................................................................................2411.0011000000
..............................TTCAGGATCAACTAAGGGCGGAG..........................................................................................................................................................................................................................................................................................................2311.0010100000
.............................................................................AA---CAACGAGTTTACTTACGA...........................................................................................................................................................................................................................................................2011.0011000000
..........................................................................CACAA---CAACGAGTTTACTTACGAGG.........................................................................................................................................................................................................................................................2511.0010000010
.......................................................CAACAATGTTCTGAGCCAGCACAA---CAAC.........................................................................................................................................................................................................................................................................2811.0010100000
..........................................................................................................CAAACAGATGAAGTACCTGGAACAGGT..........................................................................................................................................................................................................................2711.0010000100
...........................................................................ACAA---CAACGAGTTTACTTACGAGG.........................................................................................................................................................................................................................................................2411.0010000100
droYak3
CCCTGTACGAGCTGGCCCGCAATCAGGACATTCAGGATCAGCTTAGGGCGGAGATCAACAAGGTTCTGGGCAAGCACAA---CAACGAATTCACTTATGAGGGAATCAAAGAGATGAAGTACCTGGAACGGGTCGTCATGGGTGAGTGAAATTCCGC------------------AA----------------------------------------------TG-AT-----------ACA----------AATCATTACCTCAAAA--TTTTCCCTATTTTA---------TGCGATAGAAACCCTTCGCATGTATCCGGTTCTGGCGCATCTTACAAGAATGACTGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................TCAGGATCAGCTTAGGGCGGAG..........................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................................................AA---CAACGAATTCACTTATGAGGGA.......................................................................................................................................................................................................................................................2411.00100000010000
.......................CAGGACATTCAGGATCAGC.....................................................................................................................................................................................................................................................................................................................1911.00110000000000
............................CATTCAGGATCAGCTTAGGGCGGAGAT........................................................................................................................................................................................................................................................................................................2711.00101000000000
.......................................................CAACAAGGTTCTGGGCAAGCACAA---C............................................................................................................................................................................................................................................................................2511.00100100000000
.......................................................CAACAAGGTTCTGGGCAAGC....................................................................................................................................................................................................................................................................................2011.00100100000000
...........................ACATTCAGGATCAGCTTAGGGCGGAG..........................................................................................................................................................................................................................................................................................................2611.00100000010000
........GAGCTGGCCCGCAATCAGGAC..................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................A---CAACGAATTCACTTATGAGGGA.......................................................................................................................................................................................................................................................2311.00100100000000
.............................................................................................................AGAGATGAAGTACCTGGAACG.............................................................................................................................................................................................................................2111.00101000000000
.................................................GGAGATCAACAAGGTTCTGGGCAA......................................................................................................................................................................................................................................................................................2411.00101000000000
................................................................TCTGGGCAAGCACAA---CAACGAATT....................................................................................................................................................................................................................................................................2411.00110000000000
droSec2
CCCTGTACGAGCTGGCCCGCAATCAGGATATTCAGGATCAACTTCGAGAGGAGATCAACAGTGTTCTGGGCAAGCACAA---CAACGAGTTTACCTACGAGGGCATCAAGGAGATGAAGTATCTGGAGCAAGTTGTCATGGGTGAGTAAAATCACAA------------------GA----------------------------------------------GG-TT-----------ACA----------CAACTTTACCTAAATA--TT-TTCCCATTTTA---------TGCAACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACCCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................ATTCAGGATCAACTTCGAGAGGAGAT........................................................................................................................................................................................................................................................................................................2611.0010010
...........................................................................................................AAGGAGATGAAGTATCTGGAGC..............................................................................................................................................................................................................................2211.0010010
..............................................................................................CTACGAGGGCATCAAGGAGAT............................................................................................................................................................................................................................................2111.0010010
droSim2
CCCTGTACGAGCTGGCCCGCAATCAGGATATTCAAGATCAACTTCGAGAGGAGATCAACAGTGTTCTGGGCAAGCACAA---CAACGAGTTTACCTACGAGGGCATCAAGGAGATGAAGTATCTAGAGCAAGTTGTCATGGGTGAGTAAAATCCCAC------------------AT----------------------------------------------GG-AT-----------ACA----------GAACTTTAACTAAATA--CTTTCCCTATTTTG---------CGCAACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACCCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................TTCGAGAGGAGATCAACAGT.................................................................................................................................................................................................................................................................................................2014.00402200000000000000
...................................................................................AACGAGTTTACCTACGAGGGC.......................................................................................................................................................................................................................................................2114.00402110000000000000
.....................................TCAACTTCGAGAGGAGATCAACAGT.................................................................................................................................................................................................................................................................................................2513.00302100000000000000
.................................................GGAGATCAACAGTGTTCTGGGCAAG.....................................................................................................................................................................................................................................................................................2513.00303000000000000000
.............................................................TGTTCTGGGCAAGCACAA---CAACGAGTT....................................................................................................................................................................................................................................................................2712.00200000000000002000
.......................................................CAACAGTGTTCTGGGCAAGCACAA---.............................................................................................................................................................................................................................................................................2412.00200200000000000000
..............................................................GTTCTGGGCAAGCACAA---CA...........................................................................................................................................................................................................................................................................1912.00200020000000000000
......................................................................................................GCATCAAGGAGATGAAGTATCTAGAGC..............................................................................................................................................................................................................................2712.00201100000000000000
..........................................................................................................CAAGGAGATGAAGTATCTAGAGCAAGT..........................................................................................................................................................................................................................2712.00202000000000000000
....................AATCAGGATATTCAAGATC........................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
................................................................TCTGGGCAAGCACAA---CAACGAGT.....................................................................................................................................................................................................................................................................2312.00201100000000000000
.............................................................................................................................................................................................................................................................................................................AAACCCTTCGCAAGTATCCAGTTCTG........................2612.00202000000000000000
....................................................GATCAACAGTGTTCTGGGC........................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....................................TCAACTTCGAGAGGAGATCAACAGC.................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...................................................................................AACGAGTTTACCTACGAGGGCATCAAGGA...............................................................................................................................................................................................................................................2911.00100010000000000000
..............................................................GTTCTGGGCAAGCACAA---C............................................................................................................................................................................................................................................................................1811.00101000000000000000
................................................................................................................................................................................................................................................................................................................................AGTTCTGGCGCATCTAACGCGAAT.......2411.00100010000000000000
.....................................................ATCAACAGTGTTCTGGGCAAGC....................................................................................................................................................................................................................................................................................2211.00101000000000000000
........................................................................................................................ATCTAGAGCAAGTTGTCATG...................................................................................................................................................................................................................2011.00101000000000000000
..................GCAATCAGGATATTCAAG...........................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
........................................................................................GTTTACCTACGAGGGCATCAAGGAGAT............................................................................................................................................................................................................................................2711.00100010000000000000
................................................................................................................GATGAAGTATCTAGAGCAAGTTGTCA.....................................................................................................................................................................................................................2611.00100010000000000000
...............................................................TTCTGGGCAAGCACAA---CAACGAGTT....................................................................................................................................................................................................................................................................2511.00100000000000001000
..............................................................GTTCTGGGCAAGCACAA---CAACGA.......................................................................................................................................................................................................................................................................2311.00100010000000000000
.............................ATTCAAGATCAACTTCGAGAGGAG..........................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........................GATATTCAAGATCAACTTCGAGAGGAGA.........................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................CGCAAGTATCCAGTTCTGGCGCATC.................2511.00100000000000001000
.......................................................CAACAGTGTTCTGGGCAAGC....................................................................................................................................................................................................................................................................................2011.00100010000000000000
........................................................................................................................ATCTAGAGCAAGTTGTCATGGAA................................................................................................................................................................................................................2311.00100010000000000000
....................................ATCAACTTCGAGAGGAGATCAACAGT.................................................................................................................................................................................................................................................................................................2611.00100010000000000000
........................................................................................................................ATCTAGAGCAAGTTGTCATGG..................................................................................................................................................................................................................2111.00100010000000000000
....................................................................................ACGAGTTTACCTACGAGGGC.......................................................................................................................................................................................................................................................2011.00101000000000000000
......................................................................................GAGTTTACCTACGAGGGC.......................................................................................................................................................................................................................................................1811.00101000000000000000
............................TATTCAAGATCAACTTCGAGA..............................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.........................................................................GCACAA---CAACGAGTTTACCTACGA...........................................................................................................................................................................................................................................................2411.00100010000000000000
.................CGCAATCAGGATATTCAAGA..........................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...........................................................................................................AAGGAGATGAAGTATCTAGAGCAAGTT.........................................................................................................................................................................................................................2711.00100100000000000000
.........................................................................................................................TCTAGAGCAAGTTGTCATGGAA................................................................................................................................................................................................................2211.00100010000000000000
.................CGCAATCAGGATATTCAAG...........................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
..........................................................................................................................CTAGAGCAAGTTGTCATG...................................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................................................................................................................................................................................TCGCAAGTATCCAGTTCTGGCGC....................2311.00100010000000000000
..............................................................GTTCTGGGCAAGCACAA---CAAC.........................................................................................................................................................................................................................................................................2111.00100100000000000000
................................CAAGATCAACTTCGAGAGGAG..........................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................TCTGGCGCATCTAACGCGA.........1911.00100010000000000000
..................................................................................................................................................................................................................................AT-----------ACA----------GAACTTTAACTAAATA--CTTTCCC..........................................................................2811.00101000000000000000
......................................................TCAACAGTGTTCTGGGCAAGCA...................................................................................................................................................................................................................................................................................2211.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................TATCCAGTTCTGGCGCATCTAACGCGAA........2811.00100010000000000000
CCCTGTACGAGCTGGCCC.............................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................................................................TGGGCAAGCACAA---CAACGAGTT....................................................................................................................................................................................................................................................................2211.00100000000000001000
.......................................AACTTCGAGAGGAGATCAACAGT.................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......................................................TCAACAGTGTTCTGGGCAA......................................................................................................................................................................................................................................................................................1911.00100010000000000000
......................................................TCAACAGTGTTCTGGGCAAGCACAA---C............................................................................................................................................................................................................................................................................2611.00100010000000000000
.........................................................................GCACAA---CAACGAGTTTACCTACGAGGGC.......................................................................................................................................................................................................................................................2811.00100000000000100000
.............................ATTCAAGATCAACTTCGAGAGGAGA.........................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...........................................TCGAGAGGAGATCAACAGG.................................................................................................................................................................................................................................................................................................1911.00101000000000000000
......................................................................................................................GTATCTAGAGCAAGTTGTCATG...................................................................................................................................................................................................................2211.00100010000000000000
......................................................................................................................................................................................................................................................................................................................GCAAGTATCCAGTTCTGGCG.....................2011.00100010000000000000
..........................................................................CACAA---CAACGAGTTTACCTACGAG..........................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................................CAACAGTGTTCTGGGCAA......................................................................................................................................................................................................................................................................................1811.00101000000000000000
....................AATCAGGATATTCAAGATCAACTTCGA................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................GCATCTAACGCGAATGACCCA.2111.00100010000000000000
dm3
CCCTGTACGAGCTCGCCCTCGATCAGGATATTCAGGATCAACTTAGGGCGGAGATCAACAATGTTCTGAGCAAACACAA---CAACGAGTTTACCTACGAGGGAATCAAAGAGATGAAGTATCTGGAGCAGGTCGTCATGGGTAAGTAAAATCCCAA------------------GA----------------------------------------------GG-TT-----------GCA----------TAACTTTACCTAAAGGGCCTTTTCCCATTTTA---------CGCCACAGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACCCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................TACGAGGGAATCAAAGAGATGAAGTA......................................................................................................................................................................................................................................26131.00310000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000008000000030310010000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000010800000
...........................................................................................TACCTACGAGGGAATCAAAGAGATGAAG........................................................................................................................................................................................................................................28126.00260000000000000000000000000000000000000000000000000000000000000000000000000000034420000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000101001120000000000300000
..............................TTCAGGATCAACTTAGGGCGGAGATC.......................................................................................................................................................................................................................................................................................................26125.002500000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001803000
.........................................................................................................TCAAAGAGATGAAGTATCTGGAGCAGG...........................................................................................................................................................................................................................27122.00220000000000000000000000000000000000000000000000000000000000000000000000000000020130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030110000001000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000600000
..................................................................................................................TGAAGTATCTGGAGCAGGTCGTCATG...................................................................................................................................................................................................................26122.00220000000000000000000000000000000000000000010000000000000000000000000000000000011200000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000020000040000000040100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
................................................................TCTGAGCAAACACAA---CAACGAGTTTACC................................................................................................................................................................................................................................................................28121.00210000000000000000000001000000000000000000000000000000000000000000000000000000036360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000
.....................................TCAACTTAGGGCGGAGATCAACAATGT...............................................................................................................................................................................................................................................................................................27116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000001300000
.......................................AACTTAGGGCGGAGATCAACAATGT...............................................................................................................................................................................................................................................................................................25115.00150000000000000000000000000000000000000010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000
....................................................GATCAACAATGTTCTGAGCAAACACAA---C............................................................................................................................................................................................................................................................................28114.00140000000000000000000000000000000000000000000000000000000000000000000000000000025250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TCAACTTAGGGCGGAGATCAACAATG................................................................................................................................................................................................................................................................................................26113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010006000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000300000
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...........................................................................................................AAAGAGATGAAGTATCTGGAGCA.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ACCCTTCGCAAGTATCCAGTTCTGGCGC....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AGGGCGGAGATCAACAATGTC..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................AACGAGTTTACCTACGAGGG........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACGAGTTTACCTACGAGGGAATCAA..................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TAGGGCGGAGATCAACAATGTTCTGAGCAA......................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CAGTTCTGGCGCATCTAACGCGAA........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCAGGATCAACTTAGGGCGGAGA.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TCAAAGAGATGAAGTATCTGGA................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CTTCGCAAGTATCCAGTTCTG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................TTCTGGCGCATCTAACGCGAATGACC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGTTCTGAGCAAACACAA---C............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TACCTACGAGGGAATCAAAGAGATGAAC........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GTATCTGGAGCAGGTCGTCATGG..................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATTCAGGATCAACTTAGGGCGGAGATCAA.....................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GATCAACTTAGGGCGGAGATC.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................ACCTACGAGGGAATCAAAGAGATGAAT........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTACCTACGAGGGAATCAAAGAGATGAA.........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AACAATGTTCTGAGCAAACACAA---CAACGAG......................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAGCTCGCCCTCGATCAGGAT..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATTCAGGATCAACTTAGGGCGGAGATC.......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................TATTCAGGATCAACTTAGGGCGGAGATCA......................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AAGTATCCAGTTCTGGCGCATCTAAC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GATCAACAATGTTCTGAGC........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCAGGATCAACTTAGGG...............................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTCGATCAGGATATTCAGGATCAAC.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GATGAAGTATCTGGAGCAGGT..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCGCAAGTATCCAGTTCTGGCGC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACGAGTTTACCTACGAGGGAATC....................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGCAAGTATCCAGTTCTGGCGCAT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AA---CAACGAGTTTACCTACGAGGGAAT.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................GGAATCAAAGAGATGAAGTAT.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............................................................................................CCTACGAGGGAATCAAAGAGATGAAGT.......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGTATCCAGTTCTGGCGCATCTAAC.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................AAGAGATGAAGTATCTGG.................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................................................TCAACAATGTTCTGAGCAAACACAA---CAAT.........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ACCCTTCGCAAGTATCCAGTTCTGGCGCA...................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CACAA---CAACGAGTTTACCTACGAGGGAATC....................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ATCAACAATGTTCTGAGCA.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droEug1
CTCTTTACGAACTAGCCCAGAACCAGGATGTTCAGGATAAACTCAGGGACGAGGTTAACCATGTTCTGGCCAAGCACAA---TAACGAGTTTACTTACGAGGCCATCAAGGAGATGAAATACCTGGAGCAGGTCGTCATGGGTAATAT----CACAGAAAGCTTTGATATATATA-A--TTAA---------------------------------TA---------------------------------T---TATTAACTAA--------TCCATATTTAA---------TTCCATAGAAACCCTTCGCAAGTACCCAGTACTGGCTCATCTTACGAGGATGACCCAGSizeHit CountTotal NormTotal
No Reads
droBia1
CCCTCTATGAACTGGCTCGTAACCAGGATATTCAGGATAAGGTCAGGAAGGAGATCTATGATGTTCTGGGCAAGCACAA---CCACCAGTTCACCTACGAGGGAATCAAGGAGATGAAGTACCTGGAGCAGGTTGTGATGGGTAAGTAACTTAATGT------------------GGTATTATTATTTTATACCTAATAACTTGTAAGCAA-ATAATAATCAT--------------------------------------------------------------TT-CGTTTGCTTCCAGAAACCCTCCGCAAGTATCCAGTTTTGGCTCATCTTACGAGAATGACCGGGSizeHit CountTotal NormTotal
No Reads
droTak1
CCCTCTATGAACTGGCCCGCAACCAGGATGTTCAGGATTCACTCAGGGAGGAGATTAAAAATGTTCTGGGCAAGCACAA---CAACGAGTTCACCTACGAGGGAATCAAAGAGATGAAGTATCTGGAGCAGGTTGTGATGGGTACGTTTCTTGT----------------GCTTATG--TTCT----------------CT-CTATAACAA-CTATTAATCAT--------------------------------------------------------------TC-CTTCTGCTTCCAGAAACCCTTCGCAAGTACCCCGTTTTGGCGCATCTAACGAGAATGACCGATSizeHit CountTotal NormTotal
No Reads
droEle1
CTCTCTACGAGTTGGCCCGCAATCAGGGTGTTCAGGATAGACTCAGAGAGGAGATTAACAATGTTCTAGAAAAGCACAA---CAACGAGTTCACCTACGAGGGAATCAAGGAAATGAAGTATCTGGAGCAGGTCGTCATGGGTGAGTTTTCTAAA---------------GTTTA-A--CTGT----------------GTTCTTAAGTAA-AAATTGACTAT--------------------------------------------------------------TG-CTTTTGCTTACAGAAACCCTTCGAAAGTATCCCGTGCTGGCACATCTTACGAGAATGACCGAGSizeHit CountTotal NormTotal
No Reads
droRho1
CTCTCTACGAGCTGGCTCGCAATCAGGATGTTCAGGATAAACTCAGGGAGGAGATAAACCATGTTCTGGGCAAGCACAA---TAACGAGTTCACCTACGAGGGAGTCAAGGAAATGAAGTATCTGGAACAGGTAGTAATGGGTGAGTCATCTGCAAA-----------C-ACTTA-A--TTGG----------------GTT-----ATAA-TAATTAA-----------------------------------------TCCAAGCCGC------CTTTTTAA---------CTCCTTAGAAACTCTTCGAAAGTACCCAGTGCTGGCTCATCTTACGAGAATGACACAGSizeHit CountTotal NormTotal
No Reads
droFic1
CACTTTATGAACTGGCCCAGAACCAGGAGGTCCAGGATAAAGTCCGCGAAGAGATAGCCAGTGTTTTGGCCAAGCACAA---TAATGAATTCACCTACGAAGGTATCAAGGAGATGAAATATCTGGAGCAGGTCGTCATGGGTAAGTACTTAC-------------------TTTTA--TTGT----------------CT-ATTGATTAG-TTATTAA-------------------------------------------------------TTCCTTTTCA---------ACCCTCAGAAACCCTTCGCAAATATCCAGTTCTTGCGCATCTAACGAGAATAACTGACSizeHit CountTotal NormTotal
No Reads
droKik1
GCCTGTACGAGCTAGCTCTGCAGCAGGACATTCAGGATCGAGTAAGGGAAGAGATTAAAAGTGTCCTCAGCAAGACGGAGGGAGGAGAGATCTCTTATGATGCAGTAGCCGAAATGACCTACCTGGAACAGGTGCTGGCTGGTAAGTGAGATGTTAT------------------CC---------------------------CAGTCAA-A----------GG-AT------------------------AAACTTTAACT------------CAGATATT----------ATCCTCAGAAACCCTTCGAAAGCATCCCATTCTTCCCCACCTCATAAGGGAGACC-AGSizeHit CountTotal NormTotal
No Reads
droAna3
CACTGTATGAACTGGCCCAGAATCTGGACATTCAGGATAAATTGCGACAAGAGATCAACCAAGTATTGGCCAAGCACAA---CAACGAGTTCACCTACGAGGGCATCAAGGAGATGAAGTATCTGGAACAGGTCGTAATGGGTGAGTTGTAAT-----------------ATTTG-A--TTGT----------------TT-TTGAAACAA-AAAGTAACCAA-----------------------------------------------------------------C-TTTTCCATCAGAAACTCTTCGGAAGTATCCAGTTTTGGCGCATCTTACGAGGAAAACCGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................GATAAATTGCGACAAGAGATCAACC...................................................................................................................................................................................................................................................................................................2512.002020000
............................CATTCAGGATAAATTGCGACAAGA...........................................................................................................................................................................................................................................................................................................2411.001100000
..............................................................GTATTGGCCAAGCACAA---CAACGAGT.....................................................................................................................................................................................................................................................................2511.001000010
..........................................................................................................CAAGGAGATGAAGTATCTG..................................................................................................................................................................................................................................1911.001000010
...............................................................................................................................................................................................................................................................................................................................CAGTTTTGGCGCATCTTACGAGGA........2411.001000010
..........................................................................................TCACCTACGAGGGCATCAAGGA...............................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................ACTCTTCGGAAGTATCCAGTTTTGGCGC....................2811.001010000
................................................................ATTGGCCAAGCACAA---CAACGAGTT....................................................................................................................................................................................................................................................................2411.001000010
..............................................................................................................GAGATGAAGTATCTGGAAC..............................................................................................................................................................................................................................1911.001010000
................................CAGGATAAATTGCGACAAGAGAT........................................................................................................................................................................................................................................................................................................2311.001000010
.............................................................................................CCTACGAGGGCATCAAGGAGA.............................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................CAGTTTTGGCGCATCTTACGA...........2111.001010000
..................................GGATAAATTGCGACAAGAGATCA......................................................................................................................................................................................................................................................................................................2311.001000001
...................................................................................................................GAAGTATCTGGAACAGGTCGTAAT....................................................................................................................................................................................................................2411.001000010
....................................................................................................................................................................................................................................................................................................................................TTGGCGCATCTTACGAGGA........1911.001000010
...........................................................................................................................TGGAACAGGTCGTAATGGA.................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................................................................................................................................ACTCTTCGGAAGTATCCAGTTTTGGC......................2611.001000010
..........................................................................................................CAAGGAGATGAAGTATCTGGAACAGGT..........................................................................................................................................................................................................................2711.001000010
................................................................................................................GATGAAGTATCTGGAACAGGTCGTA......................................................................................................................................................................................................................2511.001000010
...........................................................................ACAA---CAACGAGTTCACCTACGAGGGC.......................................................................................................................................................................................................................................................2611.001010000
.............................................GACAAGAGATCAACCAAGTATTGGC.........................................................................................................................................................................................................................................................................................2511.001000010
...................................................................................................................GAAGTATCTGGAACAGGTCGTAATGGA.................................................................................................................................................................................................................2711.001010000
.........................GGACATTCAGGATAAATTGCGACAAGA...........................................................................................................................................................................................................................................................................................................2711.001000010
.................................................................................................................ATGAAGTATCTGGAACAGGTC.........................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................AGTTTTGGCGCATCTTACGAGGA........2311.001000010
..........................................................CCAAGTATTGGCCAAGCACAA---CAACGAG......................................................................................................................................................................................................................................................................2811.001010000
...................................................................................................................................................................................................................................................................................................................................TTTGGCGCATCTTACGAGGA........2011.001000010
....GTATGAACTGGCCCAGAATCTGGA...................................................................................................................................................................................................................................................................................................................................2411.001000001
droBip1
CTCTCTACGAATTGGCTCAGAATCAGGATGTTCAGGACAAACTGCGACAGGAGATCAACCAAGTATTGGCCAAGCACAA---CAACGAGTTTACCTACGAGGGCATCAAGGAGATGAAGTATCTGGAACAGGTGGTAATGGGTGAGTTGAAGT-----------------ATTTG-G--TTAT----------------TT-TTAAAAAAATATACTGACAAT--------------------------------------------------------------ATTA-TTTTCCATCAGAAACCCTTCGGAAGTTCCCTGTCCTGGCACATCTTACCAGAAAAACTGAASizeHit CountTotal NormTotal
No Reads
dp5
CGCTCTATGAGCTGGCGCAGAACCAGGACACTCAAGATAAGCTGAGAAATGAAATCAACGATGTTCTGGCCAAGCACAA---CAATCAGTTCACCTACGAGGGTATTAAAGAAATGAAATATCTGGAGCAGGTGGTAATGGGTGAGTACT----CGT------------------GA----------------------------------------------GGATTACATTTTGTTTCTTTTTCTCTAAT----------------------------ATTTTATAA-TTCCCTTCCAGAAACTCTTCGGAAGTACCCGGTTCTTGCTCATCTAACGCGAAAGACACAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................CAACGATGTTCTGGCCAAGC....................................................................................................................................................................................................................................................................................2022.0040110200000
........................................................................................................ATTAAAGAAATGAAATATCTGGAGCAGGT..........................................................................................................................................................................................................................2921.0020020000000
....................................................AATCAACGATGTTCTGGCCAAGC....................................................................................................................................................................................................................................................................................2321.0020020000000
.......................................................................................................................................................................................................................................................................................................................GAAGTACCCGGTTCTTGCT.....................1911.0010100000000
......................................................................................CAGTTCACCTACGAGGGTA......................................................................................................................................................................................................................................................1920.5010000100000
...................................................................................AATCAGTTCACCTACGAG..........................................................................................................................................................................................................................................................1820.5010000100000
.......................................................CAACGATGTTCTGGCCAAGCACAA---CAATC........................................................................................................................................................................................................................................................................2920.5010010000000
.............................................................................AA---CAATCAGTTCACCTACGAGGGT.......................................................................................................................................................................................................................................................2420.5010000100000
.........................GGACACTCAAGATAAGCTGAGA................................................................................................................................................................................................................................................................................................................2220.5010100000000
..........................................................CGATGTTCTGGCCAAGCACAA---CA...........................................................................................................................................................................................................................................................................2320.5010010000000
....CTATGAGCTGGCGCAGAACCA......................................................................................................................................................................................................................................................................................................................................2120.5010100000000
...........CTGGCGCAGAACCAGGACACTCAAGATA........................................................................................................................................................................................................................................................................................................................2820.5010100000000
...................................................................................AATCAGTTCACCTACGAGG.........................................................................................................................................................................................................................................................1920.5010010000000
.............................................................................................................AGAAATGAAATATCTGGAGC..............................................................................................................................................................................................................................2020.5010000100000
.......................................................CAACGATGTTCTGGCCAAGCACAA---CA...........................................................................................................................................................................................................................................................................2620.5010010000000
.......................................................CAACGATGTTCTGGCCAAG.....................................................................................................................................................................................................................................................................................1920.5010000100000
...................................................................................AATCAGTTCACCTACGAGGGT.......................................................................................................................................................................................................................................................2120.5010000100000
...............CGCAGAACCAGGACACTC..............................................................................................................................................................................................................................................................................................................................1820.5010100000000
.................CAGAACCAGGACACTCAAG...........................................................................................................................................................................................................................................................................................................................1920.5010000100000
...................................................................................AATCAGTTCACCTACGAGGG........................................................................................................................................................................................................................................................2020.5010000100000
.......................................................CAACGATGTTCTGGCCAAGCA...................................................................................................................................................................................................................................................................................2120.5010100000000
........................................................................................................................ATCTGGAGCAGGTGGTAATG...................................................................................................................................................................................................................2020.5010000100000
........................................................................................................................ATCTGGAGCAGGTGGTAATGG..................................................................................................................................................................................................................2120.5010000100000
..........................................................CGATGTTCTGGCCAAGCAC..................................................................................................................................................................................................................................................................................1930.3310010000000
droPer2
CGCTCTATGAGCTGGCGCAGAACCAGGACACTCAAGATAAGCTGAGAAATGAAATCAACGATGTTCTGGCAAAGCACAA---CAATCAGTTCACCTACGAGGGTATCAAAGAAATGAAATATCTGGAGCAGGTGGTAATGGGTGAGTATT----CGT------------------GA----------------------------------------------GGATTACATTTTGTTTCTTTTTCTCTAAT----------------------------ATTTTACAA-TTCCCTTTCAGAAACTCTTCGGAAGTACCCGGTTCTTGCTCATCTAACGCGAAAGACACAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................AAACTCTTCGGAAGTACC................................1822.004400000
..................................................................................................................TGAAATATCTGGAGCAGGTGGTAATG...................................................................................................................................................................................................................2620.501000001
...................................................................................................................GAAATATCTGGAGCAGGTGGTA......................................................................................................................................................................................................................2220.501000001
....................................................AATCAACGATGTTCTGGC.........................................................................................................................................................................................................................................................................................1820.501100000
.........................GGACACTCAAGATAAGCTGA..................................................................................................................................................................................................................................................................................................................2020.501001000
......................................................................................................................ATATCTGGAGCAGGTGGTAATGGAA................................................................................................................................................................................................................2520.501001000
.................................................................................................................ATGAAATATCTGGAGCAGGTGGTAAT....................................................................................................................................................................................................................2620.501000001
..........................GACACTCAAGATAAGCTGAG.................................................................................................................................................................................................................................................................................................................2020.501000001
..........................GACACTCAAGATAAGCTGA..................................................................................................................................................................................................................................................................................................................1920.501010000
................................................................................................................AATGAAATATCTGGAGCA.............................................................................................................................................................................................................................1820.501100000
....................................................................................ATCAGTTCACCTACGAGGGT.......................................................................................................................................................................................................................................................2020.501001000
....................................................AATCAACGATGTTCTGGCAAAGC....................................................................................................................................................................................................................................................................................2320.501000010
...................................................................................................................GAAATATCTGGAGCAGGTGGT.......................................................................................................................................................................................................................2120.501000001
droWil2
CCCTCTACGAGTTGGCTCAGCATCAGGATATACAAAGCAAAATAAGAAAGGAAGTCAACGAAGTTTTGGCTAAGCACAG---CAATGAATTCACCTATGATAGTATCAAGCAAATGAAATATCTCGAGCAAAGTGTTATGGGTAAGTGATTACCAAG--AAAATCAAAC-TCTTT-G--TTGG------------------------------------------------------GACTATTTATCGAAT----------------------ATATGTA---------TTTCTCCACAGAAACTCTACGAAAATATCCTGTTCTGGCTCATCTAACACGTCTGACCAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................AACGAAGTTTTGGCTAAGCACAG---C............................................................................................................................................................................................................................................................................2422.00400040
.................................................................................................................................................................................................................................................................................................................................GTTCTGGCTCATCTAACACGTCT.......2331.00301110
...................................................................................AATGAATTCACCTATGATAGT.......................................................................................................................................................................................................................................................2121.00200110
........................................................AACGAAGTTTTGGCTAAGCACAG---CAATG........................................................................................................................................................................................................................................................................2821.00201010
....CTACGAGTTGGCTCAGCATCAG.....................................................................................................................................................................................................................................................................................................................................2230.67201010
........................................................................................................................................................................................................................................................................................................................................CTCATCTAACACGTCTGACCAAC2330.67220000
.................CAGCATCAGGATATACAAA...........................................................................................................................................................................................................................................................................................................................1930.67200020
.................CAGCATCAGGATATACAAAGCAAAAT....................................................................................................................................................................................................................................................................................................................2620.50101000
......................................................................................................................................................................................................................................................................................................................GAAAATATCCTGTTCTGGCT.....................2020.50100010
....................CATCAGGATATACAAAGC.........................................................................................................................................................................................................................................................................................................................1820.50100010
.................CAGCATCAGGATATACAAAGC.........................................................................................................................................................................................................................................................................................................................2120.50100010
............................................................................................................................................................G--AAAATCAAAC-TCTTT-G--TTGG------------------------------------------------------..................................................................................................................2120.50101000
..............................................................................................CTATGATAGTATCAAGCAAAT............................................................................................................................................................................................................................................2120.50100010
.....................................................................................................................AATATCTCGAGCAAAGTGTTATGGA.................................................................................................................................................................................................................2520.50100010
........................................................AACGAAGTTTTGGCTAAGCACAG---CAAT.........................................................................................................................................................................................................................................................................2720.50100010
............................................................AAGTTTTGGCTAAGCACAG---C............................................................................................................................................................................................................................................................................2020.50101000
..............................................................................................CTATGATAGTATCAAGCA...............................................................................................................................................................................................................................................1820.50100010
.............................................................................................................................................................................TT-G--TTGG------------------------------------------------------GACTATTTATCGA.....................................................................................................2020.50101000
.............................ATACAAAGCAAAATAAGAAAGGAAGTA.......................................................................................................................................................................................................................................................................................................2720.50100010
....................................................................................ATGAATTCACCTATGATAGTATCA...................................................................................................................................................................................................................................................2420.50100010
...........................................................................................CACCTATGATAGTATCAAGCAAAT............................................................................................................................................................................................................................................2420.50100010
.....................ATCAGGATATACAAAGCAAAATAAG.................................................................................................................................................................................................................................................................................................................2520.50100010
........................................................................................................................ATCTCGAGCAAAGTGTTATGGAA................................................................................................................................................................................................................2320.50100010
....................................................................................................................................................................................................................................................................................................................ACGAAAATATCCTGTTCTGGC......................2120.50101000
.......................................................................AAGCACAG---CAATGAATTC...................................................................................................................................................................................................................................................................1820.50100010
..........................................................CGAAGTTTTGGCTAAGCACAG---.............................................................................................................................................................................................................................................................................2120.50101000
...........................................................................................CACCTATGATAGTATCAAG.................................................................................................................................................................................................................................................1920.50100010
...............................................................................................................AAATGAAATATCTCGAGCAAAGTGT.......................................................................................................................................................................................................................2520.50100010
.............................................................AGTTTTGGCTAAGCACAG---C............................................................................................................................................................................................................................................................................1920.50100010
......................TCAGGATATACAAAGCAA.......................................................................................................................................................................................................................................................................................................................1820.50101000
........................................................................................................................ATCTCGAGCAAAGTGTTATGGA.................................................................................................................................................................................................................2220.50100010
..........................................................................................................CAAGCAAATGAAATATCTCGAGC..............................................................................................................................................................................................................................2320.50100010
...........................................................................................................AAGCAAATGAAATATCTCGAGCAAAGT.........................................................................................................................................................................................................................2720.50100010
......................................................................................GAATTCACCTATGATAGTATC....................................................................................................................................................................................................................................................2120.50100010
....................................................................................................................................................................................................................................................................................................................ACGAAAATATCCTGTTCTGGCTCAT..................2520.50110000
...................................................................................................................................................................................................................................................................................................................TACGAAAATATCCTGTTCTGGCC.....................2320.50110000
....................................................................................................................AAATATCTCGAGCAAAGT.........................................................................................................................................................................................................................1820.50100010
.................................................................................................................................................................................................................................................................................................................TCTACGAAAATATCCTGTTCTGGCT.....................2520.50100100
...........................................................GAAGTTTTGGCTAAGCACAG---CAAT.........................................................................................................................................................................................................................................................................2420.50100010
..................................................................................................................................................................................................................................................................................................................................TTCTGGCTCATCTAACACGTCT.......2230.33101000
.........................................................................................................................................................................................................................................................................................................................................TCATCTAACACGTCTGACCAA.2130.33100010
........................................................................................................................................................................................................................................................................................................................AAATATCCTGTTCTGGCT.....................1830.33100010
..CTCTACGAGTTGGCTCAGCATCAGGAT..................................................................................................................................................................................................................................................................................................................................2730.33100010
.........................................ATAAGAAAGGAAGTCAACGA..................................................................................................................................................................................................................................................................................................2030.33101000
..........................................................................................................................................................................................................................................................................................................................................CATCTAACACGTCTGACCAAC2130.33110000
...TCTACGAGTTGGCTCAGC..........................................................................................................................................................................................................................................................................................................................................1830.33100010
.........................................................ACGAAGTTTTGGCTAAGC....................................................................................................................................................................................................................................................................................1830.33100010
..........GTTGGCTCAGCATCAGGA...................................................................................................................................................................................................................................................................................................................................1830.33100010
..........................................................CGAAGTTTTGGCTAAGCA...................................................................................................................................................................................................................................................................................1830.33100010
..........GTTGGCTCAGCATCAGGATATACA.............................................................................................................................................................................................................................................................................................................................2430.33101000
.CCTCTACGAGTTGGCTCA............................................................................................................................................................................................................................................................................................................................................1830.33100010
..........................................................................................................................................................................................................................................................................................................................ATATCCTGTTCTGGCTCAT..................1930.33100010
....................................................................................................................................................................................................................................................................................................................................CTGGCTCATCTAACACGTCT.......2030.33100100
........................................................................................................................................................................................................................................................................................................................AAATATCCTGTTCTGGCTCATCTAA..............2530.33100010
......................................AAAATAAGAAAGGAAGTCAAC....................................................................................................................................................................................................................................................................................................2130.33100001
.CCTCTACGAGTTGGCTCAGCATC.......................................................................................................................................................................................................................................................................................................................................2330.33100010
...................................................................................................................................................................................................................................................................................................................................TCTGGCTCATCTAACACGTCTGACCAAC2830.33101000
........................................................AACGAAGTTTTGGCTAAGCA...................................................................................................................................................................................................................................................................................2030.33100100
...TCTACGAGTTGGCTCAGCATC.......................................................................................................................................................................................................................................................................................................................................2130.33100010
............................................................AAGTTTTGGCTAAGCAGG.................................................................................................................................................................................................................................................................................18110.09101000
droVir3
CCCTGTACGAACTGGCCCAGCATCAGGACATCCAGGACAAGTTGAGAGCGGAAATAAACGATGTGCTTGGCAAGCACAA---CAATAAATACTCTTACGACAATGTTAAGCAAATGGAATATCTGGAGCAGGTTGTCATGGGTAACATAT----TAT------------------AC----------------------------------------------AG---CCCGTTTGTTTCTGTA----------T--TTCCCTAATTC--TAAACTTAATAC---------TTCAATATAGAAACTCTTCGCAAATATCCCGTGTTGGCCCATCTGACACGCATGGCCATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................ATGGAATATCTGGAGCAGGTT.........................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GGAATATCTGGAGCAGGTTGTC......................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................AGGACAAGTTGAGAGCGGAA..........................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................ATAAATACTCTTACGACAATGTTAAGCAAA.............................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000001000000000000000000000
.................CAGCATCAGGACATCCAGGACAAGTTGA..................................................................................................................................................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
.......................................................AAACGATGTGCTTGGCAAGC....................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.....................................................ATAAACGATGTGCTTGGCA.......................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................AATGTTAAGCAAATGGAATATCTG..................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................AAATGGAATATCTGGAGCAGGTT.........................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....GTACGAACTGGCCCAGCATCAGGA...................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
....................................................AATAAACGATGTGCTTGGCAA......................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................ATATCTGGAGCAGGTTGTCA.....................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
................CCAGCATCAGGACATCCAGGACAA.......................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.......................................................AAACGATGTGCTTGGCAAGCACAA---.............................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ATCTGACACGCATGGCCAT.1911.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................AAATACTCTTACGACAATG......................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................GGAAATAAACGATGTGCTTGGCAAGCAC..................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGCAAATATCCCGTGTTGGCCC....................2211.001000000000000000000000000000000000000000000000000000000001000000
droMoj3
CTCTCTATGAGCTGGCCCTGCATCAGGACATACAGAACAAGCTGAGAGCGGAAATCAACGAGGTGTTGAGTAGGTACAA---CAATGAGTACACCTACGATAATGTGAAGGAAATGAAATATCTGGAACAAGTTGTCATGGGTAAGTAAAATAATAT------------------AT----------------------------------------------AT-TT-----------CTA----------TAA--TAACCTGAATA--CAATTGGAATATTT---------TAAAGCAGAAACTCTACGAAAGTACCCCGTGCTACCCCATCTTACCCGAAAGGCCATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................GGAAATCAACGAGGTGTT............................................................................................................................................................................................................................................................................................1820.501100000
..................................................................................................................................................................................................................................................................................................................CTACGAAAGTACCCCGTGCTACCCC....................2520.501100000
..........................................................................................................................................................................................................................................................................................................................GTACCCCGTGCTACCCCATCTTACCCG..........2720.501100000
droGri2
CCCTATACGAGCTGGCCCAGAATCAGGATGTGCAAGACAAACTGAGAAAGGAAATTCACGAAGTGCTTGCCAAGCATAA---TAATGTGTACTCTTACGACAATATTAAAGAAATGGCATACCTCGAACAGGTTGTGATGGGTAAGTTATAAGAGCC----------------ACAT----TC----------------CT-TTGTATATGCATTGTA---------------------------------T-------------------------TATTT---CG-TGTTCCCATTTAGAAACGCTACGCAAATATCCCGTGCTGGCTCATCTTACACGCAAGACCATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................ATGTGTACTCTTACGACAATATT....................................................................................................................................................................................................................................................2311.00110

Generated: 06/11/2015 at 05:29 PM