ID:

der_1092

 Coordinate:

scaffold_4845:10852418-10852704 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-65.5 -65.5 -65.5

Flybase annnotation

CDS [Dere\GG20829-cds]; exon [dere_GLEANR_5593:2]; exon [dere_GLEANR_5593:1]; CDS [Dere\GG20829-cds]; intron [Dere\GG20829-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAAGCTATCCTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGCATGTCGATGGTACGCCATTTGATACCCTGAGCCCACTGGGCCATTTCAATTTGGCTAGTAGTCGGTCTTACATTATGGACCTTTTATTGTAGCAAGTAATGTAGTGGTGGAGTGCCCATAGATATCATCAGAGTGTATGCATCAAATGAAAATCTAATTATATTTGCTGAATACAAATTCGTAATGAGATATGGTTTAGTGTCTACTGATATTAATTAACACCTTTAACCAGTTCGAGTTCTGTGCGCTAATGGTCATGTCTTTCTCCGGGTGATTTGCAGGACTCGGGCTTCTCGGATAATGAGGAATCGCATCAGTTGCAGCATCAACA
**************************************************....(((.((((((((....)))))....((((.((((((...)))(((((.(((((((.(((((((..(((((........)))))..))))..))))))))..)).)))))(((.....))).((((((.((((.(((((((.((.((((((.((......)).)))))).))......((((((...((......(((((((((((....)))))))).....)))......))...))))))..)))))))..)))).))))))..))).))))))).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 M055
female body
 V108
head
 V040
embryo
......................................................................................................................................................................................................................................................................................................................................................GGGCTTCTCGGATAATGA........................... 18 0 1 1.00 1 1 0 0 0
...................................................................................................................AGTCGGTCTTACCTTTCGGA............................................................................................................................................................................................................................................................ 20 3 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................................CGGGCTTCTCGGATAATGAGGAAT...................... 24 0 1 1.00 1 0 0 1 0
.........................TAGCCCCGGCAGTCTGCGCAGTCAG................................................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................................................................................................................................................................................GGAATCGCATCAGTTGCAGC....... 20 0 1 1.00 1 1 0 0 0
..................................................GTGAGCATGTCGATGGTACG............................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
....................................................GTGCAAGTCGATCGTACGC............................................................................................................................................................................................................................................................................................................................ 19 3 13 0.08 1 0 0 0 1
.................................................................................................................................................................................................................................................GAGATATGGTCTATTGGCT............................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

GGTTCGATAGGACCGTGTTCGTGCTATCGGGGCCGTCAGACGCGTCAGTCCACTCGTACAGCTACCATGCGGTAAACTATGGGACTCGGGTGACCCGGTAAAGTTAAACCGATCATCAGCCAGAATGTAATACCTGGAAAATAACATCGTTCATTACATCACCACCTCACGGGTATCTATAGTAGTCTCACATACGTAGTTTACTTTTAGATTAATATAAACGACTTATGTTTAAGCATTACTCTATACCAAATCACAGATGACTATAATTAATTGTGGAAATTGGTCAAGCTCAAGACACGCGATTACCAGTACAGAAAGAGGCCCACTAAACGTCCTGAGCCCGAAGAGCCTATTACTCCTTAGCGTAGTCAACGTCGTAGTTGT
**************************************************....(((.((((((((....)))))....((((.((((((...)))(((((.(((((((.(((((((..(((((........)))))..))))..))))))))..)).)))))(((.....))).((((((.((((.(((((((.((.((((((.((......)).)))))).))......((((((...((......(((((((((((....)))))))).....)))......))...))))))..)))))))..)))).))))))..))).))))))).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V040
embryo
 GSM1528801
follicle cells		 V107
male body
...................................................................................................................................................................................................GTAATGTACTTTTAGATTAAT........................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................................................................TCTACTTAATTGTGGAAA......................................................................................................... 18 2 7 0.71 5 0 0 5 0
............................................................................................................CCGATCGTCAGACAGAATG.................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 0 1 0 0
...............................................................................................................................................................................................................TAGATTAGGATAAACGATTTA............................................................................................................................................................... 21 3 4 0.25 1 0 0 0 1
............................................................................................................................................................................................................................................CACTACTCCATACCAAATAA................................................................................................................................... 20 3 6 0.17 1 0 1 0 0
............................................................................................................CCGATCGTGACCCAGAATG.................................................................................................................................................................................................................................................................... 19 3 7 0.14 1 0 1 0 0
............................................................................................................CCGATCGTTAGCCAGCATG.................................................................................................................................................................................................................................................................... 19 3 8 0.13 1 0 1 0 0
.....................................................................................................................................CTAGCAATTAACATCGTTC........................................................................................................................................................................................................................................... 19 3 16 0.13 2 2 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4845:10852368-10852754 - der_1092 CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATGTCGATGGTACGCCATTTGATACCCTGAG-C-CCACTGGGCCATTTCAATT-TGGCTAGTAGTCGGTCTTACATTATGGACCTTTTATTG-----------TAGCAA-GTAATGTAGTGGTGGAGTGC--CCATAGATATCATCAGAGTGTATGCATCAAATGAAAATCTAATTATATTTGCTGAATACAAATTCGTAATGAGATATG---------------------------GTTTAGTGTCTA---------------------------------------CTGATATTAA----------------------------------------------------------------------TT-AACACCTTTAACCA-G-TTCGAGTTCTGTGCGCTAATGGT------CATGTCTT-TCT-C-C----GGGTGATTTGCAGGACTCGGGCTTCTCGGATAATGAGGAA--TCGCATCAGTTGCAGCATCAACA
droYak3 2R:12488298-12488750 + CCAAGCTATC---CTGGCACAAGCACGACAGTCCCGGCAGTTTGCGCAGTCAGGTAAGC--ATATCGATGGTGCCCCATTTGATATCCCCAG-C-CCATTGGGGCATTTCAATT-TGGCTACCAGTCGGTCCTACATTATGCCCCTTTTATT-----------AGAGTAAAGTAATGTAATG-CGTTGAGTCTCTATAGCTATTATCAAAGTGTATGCATCAAATGAAAATCTAATTATATTTGCTGAATACAACTTAGTAATGAGATATGCTCCTTTTAGCAGGATATTGCATCGAAGTTTAGGTTGTACAGGATTTGCAAGTGCAAAG-G-ACTTCCGTGCGTGAAACGGACATTAA----------------------------------------------------------------------TT-AAAGCCTTTAACCA-A-TTCGAGTTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGCTTTGCAGGACTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCA
droSec2 scaffold_9:38286-38723 - CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGCGCATATCGATGGTATCCCATTTGATACCACGAG-C-CCACTGGGGCATTTCAATT-TGGCCAG------------CATTATGGACCTTTTATTACGAGTATAATAGAGCAATGTAATGTAATGGAGTAGAGC--CCATAGATA--------------GTATCAAATGAAAATCTAATTATATTTGCTGCATACAATTTTGTAATAAGATATGCTCCAGTTAGCTGGATATTGAATAGAAGTTTAGGTTCTACCAATCTTGGGAGTGCAAACAA-GGTTCCATGCGAGAAACTGGCATTAA----------------------------------------------------------------------TT-TAAGCCCTTAACCA---TTCGAATTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGA-TTGCAGGATTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCA
droSim2 2r:17270651-17271088 - dsi_12777 CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGCGCATATCGATGGTATCCCATTTGATACCCCGAG-C-CCACTGGGGCATTTCAATT-TGGCCAG------------CATTATGGACCTTTTATTACGAGTATAGTAGAGCAATGTAATGTAATGGAGTAGAGC--CCATAGATA--------------GTATCAAATGAAAATCTAATTATATTTGCTGCATACAATTTTGTAATAAGATATGCTCCAGTTAGCTGGATATTGAATAGAAGATTGGGTTCTACCAATCTTGGGAGTGAAAACAA-GGTTCCATGCGAGAAACTGGCATTCA----------------------------------------------------------------------TT-TAAGCCCTTAACCA---TTCGAATTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGA-TTGCAGGACTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCA
dm3 chr2R:16712423-16712856 - CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATCGATGGTATCCCATTTGATACCCCGAA-C-CGACTGGGGCATTTCAATT-TGGCCAGCAGTCGCTCTAACATTATGGTCCTTTTATAACTATTATAGTAGAGTAATGTTATGTAATGGAGTAGAGC--CCAAA------------GTGTATACATCAAATGAAAATCGAATTATATTTGCTGCATATAATTTAGTAATGAGATATGCT-----------------GAATAGAAGTTTTGCTTCTACAAAGTTTGGGAGTGTAAACAG-AGTTCCTTGCGAGAATCCGACATTAA----------------------------------------------------------------------TT-AAAATCCTTAACCA---TTCGAATTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGATTTGCAGGATTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCA
droEug1 scf7180000409474:1243759-1244086 + CGAAGCTATC---CTGGCACAAGCATGATAGTCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATTATTGGGCGCCCATTTGGTATC--GAA-CCCAGGATGGGTATTAT---T-T---------------------------------------------------------------ATAAAGGAGAT---GCAT-----------------------------------------------------------------------A-GATCAAGTTAGCTGGAGGTTAAA-AGAAGTTCTG---------------G--------ACAGTGGTTTCTTGCT-----------TTAATTGAATTAAATTATCTTATAGATTCCAATTTTCATAGTAGC----------------------------------ATTCCTT-ACCATA-TTCGAGTTCAATACGCTAATGGT------CTTGTTTTCTCT-T-T----GGGTTATCTGCAGGATTCTGGCTTCTCTGACAATGAGGAA--TCGCATCAGCTGCATCATCAGCA
droBia1 scf7180000301754:822597-822715 + TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------------TT-AATAGTTATAA--A-A-TGCTAATGTAG--TGCTAATGTT------CCTTTTTT-TCTCGCC----CTG-TATTTGCAGGACTCGGGCTTCTCCGACAATGAGGAG--TCGCATCAGTTGCAGCATCAGCT
droTak1 scf7180000414560:77336-77454 + TTAATATTTT---CCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAA-TTCAAAATTAGTATGCTAATATT------ATTGTTTT-TCTCC-T----GACTATTTTCCAGGACTCGGGCTTCTCAGACAATGAGGAA--TCCCATCAGTTGCAGCACCAGCT
droEle1 scf7180000491240:361844-361949 + CAAAGCTATC---CTGGCACAAGCACGATAGTCCGGGCAGTCTACGCAGTCAGGTAAGC--ATTTTATTTGG-GGCTACTCAATACG--GAG-CACGAGAGGGACATTATAATT-T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779790:42421-42540 - CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATCAGTGGG-GGCTATTCGATACG--GAG-TCCGAGTTGGGCATTACAATTCTGACCAGAAGTGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454044:138983-139125 - TAATGAG----------------------------------------------------------------------------------------------GGGTAGTA-----------------------------------------------------------------ATATTT--------------------------------------------TTGAGATTTAATTATATTT----------------------------------------------------------------CT-------------------------------------------------------------------------------------------------------------------------------------ACCATT-ATTAAATACAGTACGCTAATATT---------TTTTT-TCT-T-T----GTG-GTTTCCTAGGACTCGGGCTTTTCGGATAATGAGGAA--TCGCATCAGTTGCAGCATAATCA
droKik1 scf7180000302471:1196248-1196575 - CCAAGCTCTC---CTGGCACAAGCACGATAGTCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATTCATG-TAGTCCATTTGATTCTATATATC-CCGTGGCGTTATTCTAATT-TAACTTGAAG---------------------------------------------------------------------------------------------------------------------------------------------ATA-GCTCCGATTAGTGGGAGCTTTAAGAGGATATATGTAACTACAATAATTGG--------ACAG--------------------ATTTTCA----------------------------T-TATATATTAGTATGGATTTTGGAATGATATAATAATGAACTTAAATACCTTTACCTA-AATTC--CTTCAATATGCTAAT--T------TATATCTT-TTT-T-------------CCACAGGATTCAGGCTTTTCGGACAATGAGGAG--TCACAGCAGCTGCAGCATCGGCA
droAna3 scaffold_13266:3873803-3873853 + CCAAGCTCTC---CTGGCACAAGCACGATAGTCCTGGCAGTCTGCGGAGTCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396427:2340691-2340743 + C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGACTCTGGCTTCTCCGACAATGAGGAA--TCACATCAGCTGCAGCATCAGCA
dp5 3:8443586-8443654 + CCAAGATATCGTCGTGGCACAAACAGGACAGTCCCGGCAGTCTGCGCAGTCAGGTGAGT--GATTCGAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:2326613-2326681 + CCAAGATATCGTCGTGGCACAAACAGGACAGTCCCGGCAGTCTGCGCAGTCAGGTGAGT--GATTCGAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004954:4907360-4907430 - TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TGT-T-T----TGGCCGTTTCCAGGATTCGGGCTTCTCGGACAACGAAGAG--TCGCAACAGAAACAACATCAAC-
droVir3 scaffold_12823:1993304-1993400 + TCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGCTAATATCTAAATTTTTGCCTA-CTT-T-TGTTTGATGCACCCGCAGGACTCGGGCTTCTCGGACAATGAGGAGCATCACAATAGCCAGA-------CG
droMoj3 scaffold_6496:1301419-1301471 + CGAAGCTCTC---CTGGCACAAGCATGACAGTCCGGGCAGTCTGCGCAGTCAGGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:16074241-16074293 - CCAAGCTGTC---CTGGCATAAGCACGACAGTCCCGGCAGCCTGCGCAGTCAGGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATGTCGATGGTACGCCATTTGATACCCTGAG-C-CCACTGGGCCATTTCAATT-TGGCTAGTAGTCGGTCTTACATTATGGACCTTTTATTG-----------TAGCAA-GTAATGTAGTGGTGGAGTGC--CCATAGATATCATCAGAGTGTATGCATCAAATGAAAATCTAATTATATTTGCTGAATACAAATTCGTAATGAGATATG---------------------------GTTTAGTGTCTA---------------------------------------CTGATATTAA----------------------------------------------------------------------TT-AACACCTTTAACCA-G-TTCGAGTTCTGTGCGCTAATGGT------CATGTCTT-TCT-C-C----GGGTGATTTGCAGGACTCGGGCTTCTCGGATAATGAGGAA--TCGCATCAGTTGCAGCATCAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTCTCGGATAATGA.............................1811.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCTTCTCGGATAATGAGGAA--T......................2411.0010000010
............................TAGCCCCGGCAGTCTGCGCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAA--TCGCATCAGTTGCAGC.......2011.0010000100
.....................................................GTGAGC--ATGTCGATGGTACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
CCAAGCTATC---CTGGCACAAGCACGACAGTCCCGGCAGTTTGCGCAGTCAGGTAAGC--ATATCGATGGTGCCCCATTTGATATCCCCAG-C-CCATTGGGGCATTTCAATT-TGGCTACCAGTCGGTCCTACATTATGCCCCTTTTATT-----------AGAGTAAAGTAATGTAATG-CGTTGAGTCTCTATAGCTATTATCAAAGTGTATGCATCAAATGAAAATCTAATTATATTTGCTGAATACAACTTAGTAATGAGATATGCTCCTTTTAGCAGGATATTGCATCGAAGTTTAGGTTGTACAGGATTTGCAAGTGCAAAG-G-ACTTCCGTGCGTGAAACGGACATTAA----------------------------------------------------------------------TT-AAAGCCTTTAACCA-A-TTCGAGTTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGCTTTGCAGGACTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................CGACAGTCCCGGCAGTTTGCGCAGTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00201000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGAGGAA--TCGCATCAGTTGCA.........2611.00101000000000
.......................CACGACAGTCCCGGCAGTTTGCGCAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TCT-T-C----GGGTGCTTTGCAG....................................................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGCAGGACTCGGGCC..........................................1911.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCGGGCTTCTCGGACAATGAGGA..........................2611.00101000000000
................................................................................................................................................................................GTAATG-CGTTGAGTCTCTATAGCT..........................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droSec2
CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGCGCATATCGATGGTATCCCATTTGATACCACGAG-C-CCACTGGGGCATTTCAATT-TGGCCAG------------CATTATGGACCTTTTATTACGAGTATAATAGAGCAATGTAATGTAATGGAGTAGAGC--CCATAGATA--------------GTATCAAATGAAAATCTAATTATATTTGCTGCATACAATTTTGTAATAAGATATGCTCCAGTTAGCTGGATATTGAATAGAAGTTTAGGTTCTACCAATCTTGGGAGTGCAAACAA-GGTTCCATGCGAGAAACTGGCATTAA----------------------------------------------------------------------TT-TAAGCCCTTAACCA---TTCGAATTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGA-TTGCAGGATTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................ATAGAAGTTTAGGTTCTACC...........................................................................................................................................................................................................................................................2011.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTTGCAGCATCAGCA1911.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTCTCGGACAATGAGGA..........................2011.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--TCGCATCAGTTGCAGCATCA...2211.0010001
droSim2
CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGCGCATATCGATGGTATCCCATTTGATACCCCGAG-C-CCACTGGGGCATTTCAATT-TGGCCAG------------CATTATGGACCTTTTATTACGAGTATAGTAGAGCAATGTAATGTAATGGAGTAGAGC--CCATAGATA--------------GTATCAAATGAAAATCTAATTATATTTGCTGCATACAATTTTGTAATAAGATATGCTCCAGTTAGCTGGATATTGAATAGAAGATTGGGTTCTACCAATCTTGGGAGTGAAAACAA-GGTTCCATGCGAGAAACTGGCATTCA----------------------------------------------------------------------TT-TAAGCCCTTAACCA---TTCGAATTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGA-TTGCAGGACTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGGCTTCTCGGACAATGAGGA..........................2511.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGGACAATGAGGAA--TCGCATCA...............2611.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACAATGAGGAA--TCGC...................1811.00100100000000000000
...................................................................................................................................................................AGAGCAATGTAATGTAATGGAGTAGAGC--C.................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGGACAATGAGGAA--TCGCATC................2511.00100000000000001000
dm3
CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATCGATGGTATCCCATTTGATACCCCGAA-C-CGACTGGGGCATTTCAATT-TGGCCAGCAGTCGCTCTAACATTATGGTCCTTTTATAACTATTATAGTAGAGTAATGTTATGTAATGGAGTAGAGC--CCAAA------------GTGTATACATCAAATGAAAATCGAATTATATTTGCTGCATATAATTTAGTAATGAGATATGCT-----------------GAATAGAAGTTTTGCTTCTACAAAGTTTGGGAGTGTAAACAG-AGTTCCTTGCGAGAATCCGACATTAA----------------------------------------------------------------------TT-AAAATCCTTAACCA---TTCGAATTCAGTGCGCTAATGGT------CTTGTTTT-TCT-T-C----GGGTGATTTGCAGGATTCGGGCTTCTCGGACAATGAGGAA--TCGCATCAGTTGCAGCATCAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACAATGAGGAA--TCGCATCAGT.............25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002110800000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-TCT-T-C----GGGTGATTTGCAG....................................................2216.0060000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTT-TCT-T-C----GGGTGATTTGCAG....................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGATAGCCCCGGCAGTCTGCGCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................ACGATAGCCCCGGCAGTCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGAGGAA--TCGCATCAGTTGCAGCA......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAATTCAGTGCGCTAATG.............................................................................................2012.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-TCT-T-C----GGGTGATTTG.......................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGGCTTCTCGGACAATGA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TAGCCCCGGCAGTCTGCGCAGTCAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-T-C----GGGTGATTTGCAG....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-TCT-T-C----GGGTGATTTGCAG....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TCGCATCAGTTGCAGCATC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................CGATAGCCCCGGCAGTCTGCGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GGGAGTGTAAACAG-AGTTC.................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------CTTGTTTT-TCT-T-C----GGGTGATTTG.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TACAAAGTTTGGGAGTGT.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TCT-T-C----GGGTGATTTGCA.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTTTGGGAGTGTAAACAG-AGTTCC................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................AATGAGATATGCT-----------------GAATAGAAGTTTT....................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-TCT-T-C----GGGTGATTTGCA.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACAATGAGGAA--TCGCATCAGTTGCAG........3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACAAAGTTTGGGAGTGTA............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCT-T-C----GGGTGATTTGCAG....................................................1911.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACAATGAGGAA--TCGCATCAGTTGC..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGCCCCGGCAGTCTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------CTTGTTTT-TCT-T-C----GGGTGATTTGCAG....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCGGGCTTCTCGGA...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGAA--TCGCATCAGTTGCAGCA......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......ATC---CTGGCACAAGCACGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCAGTCTGCGCAGTCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CACGATAGCCCCGGCAGTCTGCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--TCGCATCAGTTGCAGCATCAGCA2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--TCGCATCAGTTGCAGC.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAATTCAGTGCGCTAATGG............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTCTGCGCAGTCAGGTGAGC--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTT-TCT-T-C----GGGTGATTTGCAG....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGGCTTCTCGGACAATGAGGAA--TCGCA..................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GATAGCCCCGGCAGTCTGCGCAGTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTT-TCT-T-C----GGGTGATTTGCAG....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................CGATAGCCCCGGCAGTCTGCGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTT-TCT-T-C----GGGTGATTTGC......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGGCTTCTCGGACAATGAGGAA--.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGAA--TCGCATCAGTTGCAGCATC....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGAGGAA--TCGCATCAGTTGCAGC.......2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGGCTTCTCGGACAATGAG............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAA--TCGCATCAGTTGCAGCAT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-TCT-T-C----GGGTGATTTGC......................................................2011.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-T-C----GGGTGATTTGCAT....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTCTCGGACAATGAGGAA--TCGC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CGAAGCTATC---CTGGCACAAGCATGATAGTCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATTATTGGGCGCCCATTTGGTATC--GAA-CCCAGGATGGGTATTAT---T-T---------------------------------------------------------------ATAAAGGAGAT---GCAT-----------------------------------------------------------------------A-GATCAAGTTAGCTGGAGGTTAAA-AGAAGTTCTG---------------G--------ACAGTGGTTTCTTGCT-----------TTAATTGAATTAAATTATCTTATAGATTCCAATTTTCATAGTAGC----------------------------------ATTCCTT-ACCATA-TTCGAGTTCAATACGCTAATGGT------CTTGTTTTCTCT-T-T----GGGTTATCTGCAGGATTCTGGCTTCTCTGACAATGAGGAA--TCGCATCAGCTGCATCATCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
TACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------------TT-AATAGTTATAA--A-A-TGCTAATGTAG--TGCTAATGTT------CCTTTTTT-TCTCGCC----CTG-TATTTGCAGGACTCGGGCTTCTCCGACAATGAGGAG--TCGCATCAGTTGCAGCATCAGCTSizeHit CountTotal NormTotal
No Reads
droTak1
TTAATATTTT---CCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAA-TTCAAAATTAGTATGCTAATATT------ATTGTTTT-TCTCC-T----GACTATTTTCCAGGACTCGGGCTTCTCAGACAATGAGGAA--TCCCATCAGTTGCAGCACCAGCTSizeHit CountTotal NormTotal
No Reads
droEle1
CAAAGCTATC---CTGGCACAAGCACGATAGTCCGGGCAGTCTACGCAGTCAGGTAAGC--ATTTTATTTGG-GGCTACTCAATACG--GAG-CACGAGAGGGACATTATAATT-T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCAAGCTATC---CTGGCACAAGCACGATAGCCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATCAGTGGG-GGCTATTCGATACG--GAG-TCCGAGTTGGGCATTACAATTCTGACCAGAAGTGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TAATGAG----------------------------------------------------------------------------------------------GGGTAGTA-----------------------------------------------------------------ATATTT--------------------------------------------TTGAGATTTAATTATATTT----------------------------------------------------------------CT-------------------------------------------------------------------------------------------------------------------------------------ACCATT-ATTAAATACAGTACGCTAATATT---------TTTTT-TCT-T-T----GTG-GTTTCCTAGGACTCGGGCTTTTCGGATAATGAGGAA--TCGCATCAGTTGCAGCATAATCASizeHit CountTotal NormTotal
No Reads
droKik1
CCAAGCTCTC---CTGGCACAAGCACGATAGTCCCGGCAGTCTGCGCAGTCAGGTGAGC--ATATTCATG-TAGTCCATTTGATTCTATATATC-CCGTGGCGTTATTCTAATT-TAACTTGAAG---------------------------------------------------------------------------------------------------------------------------------------------ATA-GCTCCGATTAGTGGGAGCTTTAAGAGGATATATGTAACTACAATAATTGG--------ACAG--------------------ATTTTCA----------------------------T-TATATATTAGTATGGATTTTGGAATGATATAATAATGAACTTAAATACCTTTACCTA-AATTC--CTTCAATATGCTAAT--T------TATATCTT-TTT-T-------------CCACAGGATTCAGGCTTTTCGGACAATGAGGAG--TCACAGCAGCTGCAGCATCGGCASizeHit CountTotal NormTotal
No Reads
droAna3
CCAAGCTCTC---CTGGCACAAGCACGATAGTCCTGGCAGTCTGCGGAGTCAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGACTCTGGCTTCTCCGACAATGAGGAA--TCACATCAGCTGCAGCATCAGCASizeHit CountTotal NormTotal
No Reads
dp5
CCAAGATATCGTCGTGGCACAAACAGGACAGTCCCGGCAGTCTGCGCAGTCAGGTGAGT--GATTCGAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................ACAAACAGGACAGTCCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................CAGTCCCGGCAGTCTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................CAAACAGGACAGTCCCGGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................AGGACAGTCCCGGCAGTCTGCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
CCAAGATATCGTCGTGGCACAAACAGGACAGTCCCGGCAGTCTGCGCAGTCAGGTGAGT--GATTCGAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TGT-T-T----TGGCCGTTTCCAGGATTCGGGCTTCTCGGACAACGAAGAG--TCGCAACAGAAACAACATCAAC-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAG--TCGCAACAGAAACAACATCA...2711.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAGAG--TCGCAACAGAAACAAC.......2611.00100100
droVir3
TCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGCTAATATCTAAATTTTTGCCTA-CTT-T-TGTTTGATGCACCCGCAGGACTCGGGCTTCTCGGACAATGAGGAGCATCACAATAGCCAGA-------CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCCGCAGGACTCGGGCTAT........................................2312.002020000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACAATGAGGAGCATCAC...................2111.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCACCCGCAGGACTCGGGC...........................................2111.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGAGGAGCATCACAATAG..............2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCGGGCTTCTCGGACA.................................2111.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTCTCGGACAATGAGGA..........................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGAAGCTCTC---CTGGCACAAGCATGACAGTCCGGGCAGTCTGCGCAGTCAGGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................ATGACAGTCCGGGCAGTCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
CGAAGCTCTC---CTGGCACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................CATGACAGTCCGGGCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................AGCATGACAGTCCGGGCAGTCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................GCATGACAGTCCGGGCAGTCTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
CCAAGCTGTC---CTGGCATAAGCACGACAGTCCCGGCAGCCTGCGCAGTCAGGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................ATAAGCACGACAGTCCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/17/2015 at 11:27 PM