der_10

AAGTTAAATAAATAATTCCCGCGTGTGAAATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAATTATATATTTTTGATTGTTTGGAA *********************************....((((((((((.((((((((((..((((.((.((((...................))))))))))..)))))))))).)))))))))).....**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V108 head	V107 male body	V060 head	M055 female body	V040 embryo	M057 embryo	GSM1528801 follicle cells
...............................................................................................TAGCTGCCTTGTGAAGGGCTT...................................................	21	0	1	39978.00	39978	19663	13217	4711	1819	543	25	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTA..................................................	22	0	1	3801.00	3801	1192	1236	668	646	54	5	0
...............................................................................................TAGCTGCCTTGTGAAGGGCT....................................................	20	0	1	427.00	427	202	33	71	114	5	2	0
...............................................................................................TAGCTGCCTTGTGAATGGCTT...................................................	21	1	1	334.00	334	291	23	13	2	5	0	0
...............................................................................................TATCTGCCTTGTGAAGGGCTT...................................................	21	1	1	283.00	283	176	96	4	3	4	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTT..................................................	22	1	1	267.00	267	63	66	35	101	1	1	0
...............................................................................................TAGCTGCCTTGTGAAGTGCTT...................................................	21	1	1	245.00	245	187	13	38	2	5	0	0
...............................................................................................TAGCTGCATTGTGAAGGGCTT...................................................	21	1	1	179.00	179	165	5	6	2	1	0	0
...............................................................................................TAGCTTCCTTGTGAAGGGCTT...................................................	21	1	1	174.00	174	159	8	2	2	3	0	0
...............................................................................................TAGCTGACTTGTGAAGGGCTT...................................................	21	1	1	167.00	167	148	3	6	10	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGTCTT...................................................	21	1	1	155.00	155	102	10	33	2	8	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGATT...................................................	21	1	1	154.00	154	139	8	6	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAT.................................................	23	1	1	152.00	152	21	44	27	60	0	0	0
...............................................................................................TAGCTGCCTTGTTAAGGGCTT...................................................	21	1	1	146.00	146	115	14	15	1	1	0	0
...............................................................................................TAGATGCCTTGTGAAGGGCTT...................................................	21	1	1	140.00	140	127	4	2	7	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTT...................................................	20	0	1	140.00	140	33	16	5	85	1	0	0
...............................................................................................TAACTGCCTTGTGAAGGGCTT...................................................	21	1	1	118.00	118	47	64	4	0	3	0	0
...............................................................................................TACCTGCCTTGTGAAGGGCTT...................................................	21	1	1	112.00	112	66	36	3	3	2	2	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAG.................................................	23	1	1	107.00	107	57	28	21	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAA.................................................	23	1	1	100.00	100	18	17	9	53	0	0	3
..................................................AGTTTTTCATTTGGCGTGCCTAGC.............................................................................................	24	0	1	90.00	90	29	1	1	33	0	26	0
...............................................................................................TAGCTGCCTTTTGAAGGGCTT...................................................	21	1	1	87.00	87	67	10	7	0	3	0	0
...............................................................................................TAGCTGCCTTGTGACGGGCTT...................................................	21	1	1	80.00	80	8	11	58	0	3	0	0
...............................................................................................TAGCTGCCTTGCGAAGGGCTT...................................................	21	1	1	69.00	69	29	22	15	3	0	0	0
...............................................................................................TAGCTGCCTTGTGAGGGGCTT...................................................	21	1	1	53.00	53	26	15	11	1	0	0	0
...............................................................................................TAGCCGCCTTGTGAAGGGCTT...................................................	21	1	1	52.00	52	31	11	7	2	1	0	0
...............................................................................................TAGCTGCCTTGTGGAGGGCTT...................................................	21	1	1	51.00	51	28	13	7	3	0	0	0
...............................................................................................TAGCTGCCTTGTGAAAGGCTT...................................................	21	1	1	48.00	48	20	8	18	2	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGG......................................................	18	0	1	45.00	45	35	7	0	3	0	0	0
...............................................................................................CAGCTGCCTTGTGAAGGGCTT...................................................	21	1	1	44.00	44	25	11	6	2	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTTA..................................................	21	0	1	41.00	41	1	3	1	36	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGTTT...................................................	21	1	1	39.00	39	18	15	3	3	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTTT.................................................	23	2	1	36.00	36	7	11	3	15	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGC.....................................................	19	0	1	35.00	35	22	3	4	2	0	4	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTC...................................................	21	1	1	35.00	35	24	6	4	0	0	1	0
...............................................................................................TAGCTGCCTTGTGCAGGGCTT...................................................	21	1	1	35.00	35	5	4	26	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGCCTT...................................................	21	1	1	34.00	34	18	3	5	7	1	0	0
...............................................................................................TAGCTGCCCTGTGAAGGGCTT...................................................	21	1	1	32.00	32	19	8	4	0	1	0	0
...............................................................................................TAGCTACCTTGTGAAGGGCTT...................................................	21	1	1	32.00	32	18	9	5	0	0	0	0
..............................................................................................CTAGCTGCCTTGTGAAGGGCTT...................................................	22	0	1	32.00	32	19	4	2	7	0	0	0
...............................................................................................TGGCTGCCTTGTGAAGGGCTT...................................................	21	1	1	32.00	32	12	13	5	1	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCCT...................................................	21	1	1	30.00	30	19	9	1	0	1	0	0
...............................................................................................TAGCTCCCTTGTGAAGGGCTT...................................................	21	1	1	29.00	29	14	8	1	4	2	0	0
...............................................................................................TAGCTGCCTCGTGAAGGGCTT...................................................	21	1	1	28.00	28	17	6	4	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGCTTA..................................................	22	1	1	27.00	27	7	2	12	5	1	0	0
...............................................................................................TAGCTGCTTTGTGAAGGGCTT...................................................	21	1	1	26.00	26	13	4	6	2	1	0	0
...............................................................................................TAGCTGCCTTGTGAACGGCTT...................................................	21	1	1	26.00	26	14	3	7	1	1	0	0
...............................................................................................GAGCTGCCTTGTGAAGGGCTT...................................................	21	1	1	26.00	26	6	17	1	1	0	1	0
...............................................................................................TAGCTGCCTTGTGAATGGCTTA..................................................	22	1	1	24.00	24	20	1	2	1	0	0	0
...............................................................................................TATCTGCCTTGTGAAGGGCTTA..................................................	22	1	1	24.00	24	12	10	0	2	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGCGCTT...................................................	21	1	1	24.00	24	14	3	4	1	2	0	0
...............................................................................................TAGCTGCCTTGTGAAGAGCTT...................................................	21	1	1	24.00	24	9	1	13	0	1	0	0
...............................................................................................TAGCTGCCTTGTAAAGGGCTT...................................................	21	1	1	23.00	23	10	4	5	4	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTATT................................................	24	2	1	22.00	22	2	11	4	5	0	0	0
...............................................................................................TAGCTGCCTTCTGAAGGGCTT...................................................	21	1	1	21.00	21	10	5	1	3	2	0	0
...............................................................................................TAGCTGCCTTGTGAAGGACTT...................................................	21	1	1	20.00	20	17	1	1	1	0	0	0
...............................................................................................TAGCTGCCTTATGAAGGGCTT...................................................	21	1	1	20.00	20	13	2	4	1	0	0	0
...............................................................................................TAGCTGCCTTGGGAAGGGCTT...................................................	21	1	1	20.00	20	4	8	7	1	0	0	0
...............................................................................................TAGTTGCCTTGTGAAGGGCTT...................................................	21	1	1	20.00	20	12	5	1	0	1	1	0
...............................................................................................TAGCTGCCTTGTCAAGGGCTT...................................................	21	1	1	20.00	20	14	3	1	1	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTG...................................................	21	1	1	19.00	19	2	2	5	10	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTG..................................................	22	1	1	17.00	17	10	1	5	1	0	0	0
...............................................................................................TAGCTGTCTTGTGAAGGGCTT...................................................	21	1	1	17.00	17	7	4	4	0	2	0	0
...............................................................................................TAGCTGCCTTGTGATGGGCTT...................................................	21	1	1	15.00	15	6	2	6	1	0	0	0
...............................................................................................TAGGTGCCTTGTGAAGGGCTT...................................................	21	1	1	15.00	15	11	4	0	0	0	0	0
...............................................................................................TAGCTGCCTTGAGAAGGGCTT...................................................	21	1	1	14.00	14	4	4	4	1	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGTCTTA..................................................	22	1	1	14.00	14	6	0	6	1	1	0	0
...............................................................................................TAGCTGACTTGTGAAGGGCTTA..................................................	22	1	1	12.00	12	10	0	1	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTA...................................................	21	1	1	12.00	12	4	3	4	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTC..................................................	22	1	1	11.00	11	4	5	0	1	0	1	0
...............................................................................................TAGCTGCCTTGGGAAGGGCTTA..................................................	22	1	1	10.00	10	0	4	2	3	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGCTT....................................................	20	2	1	10.00	10	7	0	0	3	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGGTT...................................................	21	1	1	10.00	10	1	3	5	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGATTA..................................................	22	1	1	10.00	10	7	1	2	0	0	0	0
...............................................................................................TAGCTGCCTGGTGAAGGGCTT...................................................	21	1	1	10.00	10	0	0	9	0	1	0	0
...............................................................................................AAGCTGCCTTGTGAAGGGCTT...................................................	21	1	1	10.00	10	3	2	1	3	0	1	0
...............................................................................................TCGCTGCCTTGTGAAGGGCTT...................................................	21	1	1	10.00	10	9	1	0	0	0	0	0
...............................................................................................TAGCTGCGTTGTGAAGGGCTT...................................................	21	1	1	9.00	9	1	1	6	1	0	0	0
...............................................................................................TAGCTGCCTTGTGTAGGGCTT...................................................	21	1	1	9.00	9	1	2	6	0	0	0	0
...............................................................................................TAGCTGCCTTGTTAAGGGCTTA..................................................	22	1	1	9.00	9	7	0	1	1	0	0	0
...............................................................................................TAGATGCCTTGTGAAGGGCTTA..................................................	22	1	1	9.00	9	7	0	0	2	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTTAT.................................................	22	1	1	8.00	8	0	0	0	8	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTTT..................................................	21	1	1	8.00	8	0	1	0	7	0	0	0
.................................................................................................GCTGCCTTGTGAAGGGCTT...................................................	19	0	1	8.00	8	5	2	1	0	0	0	0
...............................................................................................TAGCTGCCTTTTGAAGGGCTTA..................................................	22	1	1	7.00	7	4	1	2	0	0	0	0
..................................................AGTTTTTCATTTGGCGTGCCTAG..............................................................................................	23	0	1	7.00	7	4	0	0	2	0	1	0
...............................................................................................TAGCTGCATTGTGAAGGGCTTA..................................................	22	1	1	7.00	7	7	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAC.................................................	23	0	1	7.00	7	5	1	1	0	0	0	0
...............................................................................................TACCTGCCTTGTGAAGGGCTTA..................................................	22	1	1	6.00	6	2	3	0	0	0	1	0
...............................................................................................TAGCTGTCTTGTGAAGGGCTTA..................................................	22	1	1	6.00	6	5	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGCCGGGCTT...................................................	21	2	1	6.00	6	0	1	5	0	0	0	0
...............................................................................................TAGCTGCCCTGTGAAGGGCTTA..................................................	22	1	1	6.00	6	1	1	3	1	0	0	0
...............................................................................................TAGCTTCCTTGTGAAGTGCTT...................................................	21	2	1	6.00	6	5	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAAA................................................	24	2	1	6.00	6	2	4	0	0	0	0	0
...............................................................................................TAGCTGACTTGTGAAGGGATT...................................................	21	2	1	6.00	6	6	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTTAAGTGCTT...................................................	21	2	1	6.00	6	4	0	2	0	0	0	0
...............................................................................................TAGCTGCCTTGTGACGGGCTTA..................................................	22	1	1	5.00	5	1	0	4	0	0	0	0
...............................................................................................TAGCGGCCTTGTGAAGGGCTT...................................................	21	1	1	5.00	5	0	0	4	1	0	0	0
...............................................................................................TAGCTTCCTTGTGAAGGGCTTA..................................................	22	1	1	5.00	5	5	0	0	0	0	0	0
...............................................................................................TAGCTGCCATGTGAAGGGCTT...................................................	21	1	1	5.00	5	5	0	0	0	0	0	0
..................................................................................................CTGCCTTGTGAAGGGCTT...................................................	18	0	1	5.00	5	0	4	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGTAGGGCTTA..................................................	22	1	1	5.00	5	1	0	3	1	0	0	0
...............................................................................................TGGCTGCCTTGTGAAGGGCTTA..................................................	22	1	1	5.00	5	1	0	1	2	0	1	0
..................................................AGTTTTTCATTTGGCGTGCCT................................................................................................	21	0	1	5.00	5	4	0	0	1	0	0	0
...............................................................................................CAGCTGCCTTGTGAAGGGCTTA..................................................	22	1	1	5.00	5	1	1	2	1	0	0	0
...............................................................................................TAGCTGCCTTGTTAAGGGCT....................................................	20	1	1	5.00	5	3	1	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAAGGCTTA..................................................	22	1	1	5.00	5	0	1	2	1	1	0	0
...............................................................................................TAGCTGCCTTGTGAATGGCT....................................................	20	1	1	5.00	5	4	0	1	0	0	0	0
...............................................................................................TAGCTGCCTAGTGAAGGGCTT...................................................	21	1	1	4.00	4	2	1	0	1	0	0	0
...............................................................................................TAGCTGCCGTGTGAAGGGCTT...................................................	21	1	1	4.00	4	1	0	2	0	1	0	0
..............................................................................................CTAGCTGCCTTGTGAAGGGCTTA..................................................	23	0	1	4.00	4	1	0	0	3	0	0	0
................................................................................................TACTGCCTTGTGAAGGGCTT...................................................	20	2	1	4.00	4	4	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCGT...................................................	21	1	1	4.00	4	0	0	2	0	2	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTATTT...............................................	25	2	1	4.00	4	1	2	0	1	0	0	0
..................................................ATTTTTTCATTTGGCGTGCCTAGC.............................................................................................	24	1	1	4.00	4	0	0	0	0	0	4	0
...............................................................................................TACCTGCCTTGTGAATGGCTT...................................................	21	2	1	4.00	4	3	0	0	0	1	0	0
...............................................................................................TAGATGCCTTGTGAAGGGATT...................................................	21	2	1	4.00	4	4	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGTCTTT..................................................	22	2	1	4.00	4	0	0	4	0	0	0	0
...............................................................................................TAGTTGCCTTGTGAAGGGCTTA..................................................	22	1	1	4.00	4	1	1	0	1	0	1	0
...............................................................................................TAGCTGCCTTGTGAATGTCTT...................................................	21	2	1	4.00	4	0	0	3	0	1	0	0
...............................................................................................TAGATGCATTGTGAAGGGCTT...................................................	21	2	1	4.00	4	4	0	0	0	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTTAA.................................................	22	1	1	4.00	4	0	0	0	4	0	0	0
...............................................................................................TAGCTGCATTGTGAAGGGATT...................................................	21	2	1	4.00	4	4	0	0	0	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCT....................................................	19	0	1	4.00	4	0	0	0	4	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTTG.................................................	23	2	1	3.00	3	0	0	1	2	0	0	0
.................................................................................................TCTGCCTTGTGAAGGGCTT...................................................	19	1	1	3.00	3	2	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGCAGGGCTTA..................................................	22	1	1	3.00	3	0	0	3	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGCCTTA..................................................	22	1	1	3.00	3	0	1	1	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAGGGGCTTA..................................................	22	1	1	3.00	3	0	3	0	0	0	0	0
...............................................................................................TTGCTGCCTTGTGAAGGGCTT...................................................	21	1	1	3.00	3	2	1	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGATGGGCTTA..................................................	22	1	1	3.00	3	0	0	2	1	0	0	0
...............................................................................................TATCTTCCTTGTGAAGGGCTT...................................................	21	2	1	3.00	3	2	0	0	0	1	0	0
...............................................................................................TAGCTTCCTTGTGAATGGCTT...................................................	21	2	1	3.00	3	3	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGCT....................................................	20	1	1	3.00	3	3	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAACGGCTTA..................................................	22	1	1	3.00	3	1	1	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGGAGGGCTTA..................................................	22	1	1	3.00	3	2	0	1	0	0	0	0
...............................................................................................TAGCTGCATTGTGAAGGGCT....................................................	20	1	1	3.00	3	2	0	0	1	0	0	0
...............................................................................................TATCTGCCTTGTGAAGTGCTT...................................................	21	2	1	3.00	3	3	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAATGGC.....................................................	19	1	1	3.00	3	2	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTGTTAATGGCTT...................................................	21	2	1	3.00	3	2	0	1	0	0	0	0
...............................................................................................TAGCTGCATTGTGAAGGGCTTAG.................................................	23	2	1	3.00	3	3	0	0	0	0	0	0
...............................................................................................TAGCTCCCTTGTGAAGGGCTTA..................................................	22	1	1	3.00	3	2	0	0	1	0	0	0
.................................................................................................GCTGCCTTGTGAAGGGCTTA..................................................	20	0	1	3.00	3	1	0	1	1	0	0	0
...............................................................................................TAGCTGCCTTGCGAAGGGCTTA..................................................	22	1	1	3.00	3	0	0	1	0	2	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA...............................................	25	3	1	3.00	3	1	0	0	2	0	0	0
...............................................................................................TAACTGCCTTGTGAAGGGCTTA..................................................	22	1	1	3.00	3	1	0	1	1	0	0	0
...............................................................................................TAGCTGCCTTGCGAAGGGCT....................................................	20	1	1	3.00	3	2	0	1	0	0	0	0
...............................................................................................TAGCTGGCTTGTGAAGGGCTT...................................................	21	1	1	3.00	3	3	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGAGCTTA..................................................	22	1	1	2.00	2	0	0	2	0	0	0	0
...............................................................................................AAGCTGCCTTGTGAAGGGCTTA..................................................	22	1	1	2.00	2	0	0	0	2	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTTTTT...............................................	25	3	1	2.00	2	0	0	1	1	0	0	0
...............................................................................................TAGATGACTTGTGAAGGGCTT...................................................	21	2	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTTAAGGGCTTT..................................................	22	2	1	2.00	2	0	0	2	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGCTTT..................................................	22	2	1	2.00	2	0	0	2	0	0	0	0
...............................................................................................TAGCTGCCTTATGAAGGGCTTA..................................................	22	1	1	2.00	2	1	1	0	0	0	0	0
...............................................................................................TACCTGCCTTGTGAAGGGCT....................................................	20	1	1	2.00	2	0	0	0	1	0	1	0
...............................................................................................TAGCTGCCTTGTGAAGGGCAT...................................................	21	1	1	2.00	2	1	1	0	0	0	0	0
...............................................................................................TATCTGCCTTGTGAAGGTCTT...................................................	21	2	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTTTGAAGGTCTT...................................................	21	2	1	2.00	2	1	0	0	0	1	0	0
..............................................................................................ATAGCTGCCTTGTGAAGGGCTTA..................................................	23	1	1	2.00	2	0	0	0	2	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTTTTT................................................	23	3	1	2.00	2	0	0	0	2	0	0	0
...............................................................................................TAGCTGCCTTGTCAAGGGCT....................................................	20	1	1	2.00	2	1	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGTTT...................................................	21	2	1	2.00	2	0	0	1	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCC....................................................	20	1	1	2.00	2	0	1	0	0	0	1	0
...............................................................................................TAGCTGCCTTGTGACGGGCTG...................................................	21	2	1	2.00	2	0	0	0	0	2	0	0
...............................................................................................TAGCTGCCTTGTCAAGGGCTTA..................................................	22	1	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGATGCCTTGTGAAGGGCT....................................................	20	1	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGACTTGTGAAGGGCTTT..................................................	22	2	1	2.00	2	2	0	0	0	0	0	0
..................................................AGTTTTTCATTTGGCGTGCCTA...............................................................................................	22	0	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGCGAAGTGCTT...................................................	21	2	1	2.00	2	0	0	1	0	1	0	0
...............................................................................................GATCTGCCTTGTGAAGGGCTT...................................................	21	2	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGCCT....................................................	20	1	1	2.00	2	1	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTCA..................................................	22	1	1	2.00	2	1	0	1	0	0	0	0
...............................................................................................TCTCTGCCTTGTGAAGGGCTT...................................................	21	2	1	2.00	2	2	0	0	0	0	0	0
..................................................AGTTTTTCATTTGGCGTGCC.................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTCTGAAGGGCTTA..................................................	22	1	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTTTT................................................	24	3	1	2.00	2	1	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAATGGCTTAG.................................................	23	2	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCATGTGAAGGGCTTA..................................................	22	1	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGATGCCTTGTGAAGGGCTTT..................................................	22	2	1	2.00	2	0	0	0	2	0	0	0
...............................................................................................TAGCGGCCTTGTGAGGGGCTT...................................................	21	2	1	2.00	2	0	0	2	0	0	0	0
...............................................................................................TAGCCGCCTTGTGAAGGGCT....................................................	20	1	1	2.00	2	1	0	0	1	0	0	0
...............................................................................................TAGCTGCGTTGTGAAGGGCTTA..................................................	22	1	1	2.00	2	1	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGCAGGGCT....................................................	20	1	1	2.00	2	1	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAGTGGCTT...................................................	21	2	1	2.00	2	2	0	0	0	0	0	0
...........................................................................................GATCTAGCTGCCTTGTGAAGGGCTT...................................................	25	3	1	2.00	2	0	2	0	0	0	0	0
...............................................................................................TAGCGGCATTGTGAAGGGCTT...................................................	21	2	1	2.00	2	0	0	2	0	0	0	0
...............................................................................................TATCTGCCTTGGGAAGGGCTT...................................................	21	2	1	2.00	2	1	0	0	1	0	0	0
...............................................................................................TACCTGCCTTGCGAAGGGCTT...................................................	21	2	1	2.00	2	1	1	0	0	0	0	0
...............................................................................................AAACTGCCTTGTGAAGGGCTT...................................................	21	2	1	2.00	2	0	1	1	0	0	0	0
...............................................................................................TAGCTGCCTTGCGAATGGCTT...................................................	21	2	1	2.00	2	0	0	1	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGCTTAG.................................................	23	2	1	2.00	2	1	0	1	0	0	0	0
..................................................AGCTTTTCATTTGGCGTGCCTAGC.............................................................................................	24	1	1	2.00	2	0	0	0	0	0	2	0
...............................................................................................TAGCTTCCTTGTGAAGGGCT....................................................	20	1	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAATGGCTTATT................................................	24	3	1	2.00	2	1	1	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGA.....................................................	19	1	1	2.00	2	1	1	0	0	0	0	0
...............................................................................................TATCTGCCTTGTTAAGGGCTT...................................................	21	2	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGACTGGCTT...................................................	21	2	1	2.00	2	0	0	1	0	1	0	0
...............................................................................................GAGCTGCCTTGTGAAGGGCTTA..................................................	22	1	1	2.00	2	0	2	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGT.....................................................	19	1	1	2.00	2	2	0	0	0	0	0	0
...................................................GTTTTTCATTTGGCGTGCCTAG..............................................................................................	22	0	1	2.00	2	0	0	0	2	0	0	0
...............................................................................................TATCTGCCTTGTGAAGGGCTTAA.................................................	23	2	1	2.00	2	0	1	0	1	0	0	0
................................................................................................AGCTGCCCTGTGAAGGGCTT...................................................	20	1	1	2.00	2	0	0	0	2	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTTCTT...................................................	21	2	1	2.00	2	0	0	1	0	1	0	0
.............................................................................................GTTAGCTGCCTTGTGAAGGGCTTA..................................................	24	1	1	2.00	2	0	0	0	2	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGCGCTTA..................................................	22	1	1	2.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTACT................................................	24	1	1	2.00	2	0	1	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTAAT................................................	24	2	1	2.00	2	0	1	1	0	0	0	0
..................................................................................................TAGCCTTGTGAAGGGCTT...................................................	18	2	2	1.50	3	1	2	0	0	0	0	0
...............................................................................................TAGATGCCTTGTGAAGCGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TACCTGCCTTGTGAAGGGCTTAT.................................................	23	2	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................CTAGCTGCCTTGTGAAGGGCT....................................................	21	0	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TATCTGCCTTTTGAAGGGCTT...................................................	21	2	2	1.00	2	2	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGTAGGGCTTAC.................................................	23	1	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCCTCCTTGTGAAGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................TTAGCTACCTTGTGAAGGGCTTA..................................................	23	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGTCTTGGGAAGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCAGCCTTGTTAAGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TGGCTGCCTTGTTAAGGGCTTA..................................................	22	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTCCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGGTGCCCTGTGAAGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGAGCTTAT.................................................	23	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGGTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTACCTTGTGAAGGGCTTA..................................................	22	1	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGATGCCTTGTGAAGGGGTT...................................................	21	2	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................TAGCTTCCTTGTTAAGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAGGGGCTTGTG................................................	24	3	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................GAACTGCCTTGTGAAGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGGGAGGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTGGTGAAGGGGTTT..................................................	22	3	2	1.00	2	0	0	2	0	0	0	0
...............................................................................................TAGGTTCCTTGTGAAGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAACAGCCTTGTGAAGGGCTT...................................................	21	2	1	1.00	1	0	1	0	0	0	0	0
..................................................ATCTTTTCATTTGGCGTGCCTAGC.............................................................................................	24	2	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................TAGCTGCCCTGTGAAGGGCTTAT.................................................	23	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCCTGTGAAGGGT.....................................................	19	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTCAAGGGCTTAT.................................................	23	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TGGTTGCCTTGTGAAGGGCTTA..................................................	22	2	1	1.00	1	0	0	0	0	0	1	0
....................................................TTTTTCATTTGGCGTGCCT................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTCCCTTGTGAAGGGCT....................................................	20	1	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................CATCTGCCTTGTGAAGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCAGCCTTGTGAACGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
..............................................................................................CTAGCTGCCTTGTTAATGGCTT...................................................	22	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAACTGCCTTGTGAAAGGCTT...................................................	21	2	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAATGGCTTAA.................................................	23	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAACTGCCTTGTCAAGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCTTTGTGAAGGTCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGGGAGGGGCTTC..................................................	22	3	1	1.00	1	0	0	1	0	0	0	0
..................................................AGTTTTTCATTTGTCGTGCCTAG..............................................................................................	23	1	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGACTTGTGATGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGACTTGTCAAGGGCCT...................................................	21	3	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGCTTTT.................................................	23	3	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................GCTAGCTGCCTTGTGAAGGGCTT...................................................	23	0	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGAGAAGGCCTT...................................................	21	2	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................TAGATGCCTTGTGAAGGACTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TATCTGCCTTGTGAAGGTCTTA..................................................	22	2	1	1.00	1	1	0	0	0	0	0	0
..................................................AGTTTTTCATTTGGCGTG...................................................................................................	18	0	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAGAGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAATCGCTTA..................................................	22	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTTAAGGACTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCAGCCTTGTTAACGGCTT...................................................	21	3	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGACTTGTGAAGGGCGT...................................................	21	2	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGTT....................................................	20	1	1	1.00	1	0	0	0	0	1	0	0
..................................................AGTTTTTCATTGGGCGTGCCTAGC.............................................................................................	24	1	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................TAGCTGCGTTGTGTAGGGCTT...................................................	21	2	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTCTGGAGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TATCTGCCTTATGAAGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGGCTTGTGATGGGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAACAGCCTTGTGTAGGGCTT...................................................	21	3	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................TAGCTGCCTTGTGATGGCCTT...................................................	21	2	1	1.00	1	0	0	0	1	0	0	0
.................................................................................................TCTGCCTTGTGAAGGGCT....................................................	18	1	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGACGGGATT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCGGCCTTGTGAAGGGGTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTTCCTTGTGAATGGCTTA..................................................	22	2	1	1.00	1	1	0	0	0	0	0	0
........................................................................................ATCGGGCTAGCTGCCTTGTGAAGGGCTTA..................................................	29	3	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGATGCCTTGTGAAGTGCT....................................................	20	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCAGCCTTGTGAAGGGCTT...................................................	21	1	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................TAGCTGTCTTGTGAAGTGCT....................................................	20	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGCTAAGGGCTTA..................................................	22	2	1	1.00	1	1	0	0	0	0	0	0
................................................................................................AGCTGCCTTGTGAAGGGCTTAG.................................................	22	1	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGGGAAGGGCTTATT................................................	24	3	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGTTGCCTTGTGAAGGGATT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGACGCCTTGTGAAGGGCTT...................................................	21	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTTTA................................................	24	3	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................TAGCCGCCTTGTGAAGGGCTTA..................................................	22	1	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................TAGCTGCCTTGCGAAGGCCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
................................................................................................ACCTGCCTTGTGAAGGGCTT...................................................	20	1	1	1.00	1	0	0	0	1	0	0	0
..............................................................................................TTAGCTGCCTTGTGAAGGGCTT...................................................	22	1	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGATGCCTTGTGAAGGGCTTAA.................................................	23	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGCTGCCTTGAGAAGGGCTTA..................................................	22	1	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGGTGCCTTGTGAAGGGATT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
..................................................AGTTTTTCATTTGGAGTGCCTAC..............................................................................................	23	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGACTTGTCAAGGTCTTA..................................................	22	3	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGTGCTG...................................................	21	2	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................TAGATGCCTTGTAAAGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGAAGGGCTTTA.................................................	23	2	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................TAGCTGCCTTGTGGTGGGCTT...................................................	21	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTTCCTTTTGAAGGGCTTA..................................................	22	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTTCCTTGTGAAGGGCTTAA.................................................	23	2	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................TAGCTGCCGTGGGAAGGGCTTA..................................................	22	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTTGGGAAGTGCTT...................................................	21	2	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................TAGCTGCCTCGGGGAGGGCTT...................................................	21	3	1	1.00	1	0	1	0	0	0	0	0

Species	Coordinate	ID	Type	Alignment
droEre2	scaffold_4644:121618-121784 -	der_10	confident	AAGTTAAA------TAAAT----A-----ATTCCCG---CGTGTG-AAAT-----GTGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAC-CTCTTTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTG-CA----AAA---TTATATA--------------TTTTT--GATTGTTTGGAA
droYak3	X:117031-117206 -	dya_19	confident	AGTTTAA-------TAAAT--T-AATG-ATTTCCCG---CGTGTG-AGAT-----GTGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAG-CTTTTTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACTGCCAAA---TGATATA--------------TTTTT--GATTGTTTGGAA
droSec2	scaffold_10:47166-47328 -	dse_14	confident	TTTTTTGT------TAAAT-----------TTTCCG---CGTGTG-AAAT-----ACGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCAC-TACTTTT-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA--------------TTTTT----TTATTTTTAT
droSim2	x:113218-113377 -	dsi-mir-980	Known_mirbase	TTTTGT--------TAAAT-----------TTTCCG---CGTGTG-AAAT-----ACGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCAC-TACTTTT-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA--------------TTTTT--T---ATTTTTAT
dm3	chrX:174170-174331 -	dme-mir-980	Known_mirbase	TTGTTA----------AAT-----------TTCCCG---CGTGTG-AAAT-----ACGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTAC-TCCTTTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTC-CC----GAA---TAATAAA--------------TTTTTC-GACTGTTTAAAA
droEug1	scf7180000409277:495705-495866 -			GAGTTTTGGTTAAATGAGT------TG-A-ATTGCG---CGTTTG-GAAA-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGAC-CTTTGTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AGG---ATAAATG--------------TCCTT--------------
droBia1	scf7180000301760:1131730-1131863 -			GAGTTG--------TGAGT-----------TGTGCGCG--GTTTC-GGCG-----GCGA-GGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTAC-TCCTG-T-TCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTG-----------------------------------------------------
droTak1	scf7180000415179:121490-121657 -			AAGTTGAT------TAAAT-----------TTCCCGCGGTTTGCA-GAAT-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGAC-TTCTGTT-TAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTG-GC----AGG---ATGTGTG--------------TCCTG--GATTTTTCGAGA
droEle1	scf7180000491011:1178466-1178641 -			GAGTTAAG------TGAAT----ATTGGTTTTGCCG---CATCTGAGAAA-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGAC-TTTTGTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-AC----TGGGATATATATG--------------TCCTT--GGTTATTCTGGA
droRho1	scf7180000779506:958260-958419 -			GAGTTAAG------TGAAT----AT-------T--------TG-G-GAAA-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGAC-TTCTGTT-AAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AAGG--ATATATG--------------TCCTT--AATTGTCCTGGA
droFic1	scf7180000453927:606404-606544 -			AAGT-----------------------------------------------------GA-AGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGAC-TTCTGTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTG-AC----TGAGATATATATA--------------TCCTT--GAATATTCGGGA
droKik1	scf7180000302544:871476-871622 +			ATGTGAAGGAAAAGCAAGT----------------G---CCTGTG-GAAG-----TGCT-AGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTGAC-TTTC--A-TAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGG-AA----AGA---GGATATA---------------------------------
droAna3	scaffold_13117:4815145-4815323 -	dan_130	candidate-rescued	ATATTTAA------AAAGT----GA-------T---------AAG-AAATGTCCTAGGA-AGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGAC-TTTAA-A-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GC----AGA---ATATGTAAAGGACTTAGTGTTTTTTTCTTTTTTTTTAAAG
droBip1	scf7180000395508:43159-43273 +			A-----------------------------------------------------------AGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGAC-TTTAA-A-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GA----AAA---ATATTTA---------------------------------
dp5	XL_group1e:4097644-4097781 -	dps-mir-980	Known_mirbase	GAGTGA--------CAAATTTCT-GTG-AATTCCCG---CC-AC--AAAA-----GAGA-AACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGAC-TTGTT-T-CTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------
droPer2	scaffold_17:1039193-1039330 -	dpe_10	confident	GAGTGA--------CAAAGTTCT-GTG-AATTCCCG---CC-AC--AAAA-----GAGA-AACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGAC-TTGTT-T-CTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------
droWil2	scf2_1100000004909:8731771-8731877 +	dwi_30	confident	-----------------------------------------------------------------ATTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTATTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTGTTGAACAACAA-AA----AAA---AA--------------------------------------
droVir3	scaffold_10277:1029-1129 -	dvi-mir-980	Known_mirbase	AAAT---------------------------------------------------GTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCT-TTT-AAT-ACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGT---------------------------------------------------------------
droGri2	scaffold_14853:6339026-6339158 +	dgr_25	candidate-rescued	TATTTAAT-----------------------TC-TG---ATTAT-------------GAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCT-TTTCAAT-TTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTG-AG----GAA---AAATA-----------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droEre2

AAGTTAAA------TAAAT----A-----ATTCCCG---CGTGTG-AAAT-----GTGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAC-CTCTTTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTG-CA----AAA---TTATATA--------------TTTTT--GATTGTTTGGAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	39978.00	39978	1819	25	4711	543	13217	19663	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	3801.00	3801	646	5	668	54	1236	1192	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	427.00	427	114	2	71	5	33	202	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	267.00	267	101	1	35	1	66	63	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	152.00	152	60	0	27	0	44	21	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	140.00	140	85	0	5	1	16	33	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	107.00	107	0	0	21	1	28	57	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	100.00	100	53	0	9	0	17	18	3
...........................................................................AGTTTTTCATTTGGCGTGCCTAGC.......................................................................................................................	24	1	90.00	90	33	26	1	0	1	29	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	45.00	45	3	0	0	0	7	35	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	41.00	41	36	0	1	0	3	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	36.00	36	15	0	3	0	11	7	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	35.00	35	2	4	4	0	3	22	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	35.00	35	0	1	4	0	6	24	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	32.00	32	7	0	2	0	4	19	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	22.00	22	5	0	4	0	11	2	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	19.00	19	10	0	5	0	2	2	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	17.00	17	1	0	5	0	1	10	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	12.00	12	0	0	4	1	3	4	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	11.00	11	1	1	0	0	5	4	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.........................................................................	22	1	8.00	8	8	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	8.00	8	7	0	0	0	1	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	8.00	8	0	0	1	0	2	5	0
...........................................................................AGTTTTTCATTTGGCGTGCCTAG........................................................................................................................	23	1	7.00	7	2	1	0	0	0	4	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	7.00	7	0	0	1	0	1	5	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	6.00	6	0	0	0	0	4	2	0
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	5.00	5	0	0	1	0	4	0	0
...........................................................................AGTTTTTCATTTGGCGTGCCT..........................................................................................................................	21	1	5.00	5	1	0	0	0	0	4	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	4.00	4	3	0	0	0	0	1	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.........................................................................	22	1	4.00	4	4	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	4.00	4	4	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.........................................................................	23	1	3.00	3	2	0	1	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTA..........................................................................	20	1	3.00	3	1	0	1	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.......................................................................	25	1	3.00	3	2	0	0	0	0	1	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTTTT........................................................................	23	1	2.00	2	2	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCC............................................................................	20	1	2.00	2	0	1	0	0	1	0	0
...........................................................................AGTTTTTCATTTGGCGTGCCTA.........................................................................................................................	22	1	2.00	2	0	0	0	0	0	2	0
...........................................................................AGTTTTTCATTTGGCGTGCC...........................................................................................................................	20	1	2.00	2	0	0	0	0	0	2	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT........................................................................	24	1	2.00	2	1	0	0	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGA.............................................................................	19	1	2.00	2	0	0	0	0	1	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	2.00	2	0	0	0	0	0	2	0
............................................................................GTTTTTCATTTGGCGTGCCTAG........................................................................................................................	22	1	2.00	2	2	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT........................................................................	24	1	2.00	2	1	0	0	0	1	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT........................................................................	24	1	2.00	2	0	0	1	0	1	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCT............................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.............................................................................TTTTTCATTTGGCGTGCCT..........................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................GCTAGCTGCCTTGTGAAGGGCTT...........................................................................	23	1	1.00	1	1	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTG.............................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAG.........................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA........................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.........................................................................	23	1	1.00	1	0	0	0	0	1	0	0

droYak3

AGTTTAA-------TAAAT--T-AATG-ATTTCCCG---CGTGTG-AGAT-----GTGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAG-CTTTTTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACTGCCAAA---TGATATA--------------TTTTT--GATTGTTTGGAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	9564.00	9564	21	608	247	663	1835	3957	2233	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	1136.00	1136	1	169	87	77	177	450	175	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGCCTAGC.......................................................................................................................	24	1	161.00	161	0	3	150	6	0	1	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	156.00	156	1	29	10	10	35	70	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	119.00	119	1	44	7	1	16	39	11	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	53.00	53	0	47	0	0	3	3	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	41.00	41	0	0	0	0	12	21	8	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	37.00	37	0	14	0	0	2	13	8	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	31.00	31	0	17	1	0	3	9	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	30.00	30	0	0	22	0	1	4	3	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	23.00	23	0	2	6	7	1	2	5	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	20.00	20	0	4	13	0	1	1	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	18.00	18	0	1	1	0	4	10	2	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	16.00	16	0	15	1	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	16.00	16	0	1	0	0	3	9	3	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	14.00	14	0	3	0	0	2	7	2	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	11.00	11	0	0	3	0	4	2	2	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGCCTAG........................................................................................................................	23	1	9.00	9	0	4	5	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	7.00	7	0	0	1	0	2	3	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	7.00	7	0	1	2	1	0	2	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	5.00	5	0	0	0	0	0	2	3	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGCCT..........................................................................................................................	21	1	3.00	3	0	1	0	2	0	0	0	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	3.00	3	0	2	0	0	0	0	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCC............................................................................	20	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	3.00	3	0	0	0	0	1	1	1	0	0	0	0
.............................................................................TTTTTCATTTGGCGTGCCTAGC.......................................................................................................................	22	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	3.00	3	0	1	0	1	0	0	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	2.00	2	0	1	0	0	0	1	0	0	0	0	0
..........................................................................CAGTTTTTCATTTGGCGTGCCTAGC.......................................................................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT........................................................................	24	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTT..........................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
...................................................................................................TTAG-CTTTTTT-TAAATATTGC................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCT............................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
............................................................................GTTTTTCATTTGGCGTGCCTAGC.......................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGCCTA.........................................................................................................................	22	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.........................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
............................................................................GTTTTTCATTTGGCGTGCCTAG........................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGAA............................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGAC............................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................TGCTAGCTGCCTTGTGAAGGGT.............................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................TTTTCATTTGGCGTGCCTAGC.......................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTGA.........................................................................	23	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0

droSec2

TTTTTTGT------TAAAT-----------TTTCCG---CGTGTG-AAAT-----ACGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCAC-TACTTTT-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA--------------TTTTT----TTATTTTTAT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	24813.00	24813	352	6496	11016	6949
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	2542.00	2542	147	380	1722	293
...........................................................................AGTTTTTCATTTGGCGTGGCTAGC.......................................................................................................................	24	1	982.00	982	27	38	804	113
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	138.00	138	21	3	68	46
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	120.00	120	31	45	6	38
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	93.00	93	3	1	78	11
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	70.00	70	33	14	13	10
...........................................................................AGTTTTTCATTTGGCGTGGCTAG........................................................................................................................	23	1	54.00	54	2	9	38	5
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	40.00	40	8	8	14	10
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	40.00	40	0	2	35	3
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	27.00	27	3	3	15	6
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	26.00	26	16	1	7	2
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	24.00	24	12	8	0	4
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	24.00	24	0	6	10	8
...........................................................................AGTTTTTCATTTGGCGTGGCT..........................................................................................................................	21	1	19.00	19	0	5	6	8
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	17.00	17	0	3	9	5
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	14.00	14	4	5	0	5
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	12.00	12	2	5	3	2
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	10.00	10	7	1	1	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	7.00	7	0	3	3	1
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	6.00	6	1	1	4	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	6.00	6	0	3	2	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	5.00	5	0	2	1	2
...........................................................................AGTTTTTCATTTGGCGTGGCTA.........................................................................................................................	22	1	4.00	4	0	0	3	1
...........................................................................AGTTTTTCATTTGGCGTGGCTAGCT......................................................................................................................	25	1	4.00	4	0	0	4	0
............................................................................GTTTTTCATTTGGCGTGGCTAGC.......................................................................................................................	23	1	4.00	4	3	0	1	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	3.00	3	0	0	2	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	3.00	3	1	0	1	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT........................................................................	24	1	3.00	3	1	1	0	1
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	3.00	3	3	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGGC...........................................................................................................................	20	1	3.00	3	0	0	3	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT........................................................................	24	1	3.00	3	0	1	1	1
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	3.00	3	2	1	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	2.00	2	0	0	2	0
.............................................................................TTTTTCATTTGGCGTGGCTAGC.......................................................................................................................	22	1	2.00	2	1	1	0	0
...........................................................................AGTTTTTCATTTGGCGTGGCTAGCA......................................................................................................................	25	1	2.00	2	0	0	2	0
...........................................................................AGTTTTTCATTTGGCGTGGCTAGT.......................................................................................................................	24	1	2.00	2	0	0	1	1
............................................................................................................................GCTGCCTTGTGAAGGGCTTA..........................................................................	20	1	2.00	2	0	0	2	0
...........................................................................AGTTTTTCATTTGGCGTG.............................................................................................................................	18	1	2.00	2	0	0	0	2
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.........................................................................	22	1	2.00	2	2	0	0	0
..........................................................................CAGTTTTTCATTTGGCGTGGCTAGC.......................................................................................................................	25	1	2.00	2	0	0	2	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.........................................................................	23	1	2.00	2	0	2	0	0
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	1.00	1	0	1	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTACG........................................................................	23	1	1.00	1	0	0	1	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTTA.........................................................................	22	1	1.00	1	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGCT.............................................................................	19	1	1.00	1	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCGG...........................................................................	21	1	1.00	1	0	0	0	1
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.........................................................................	22	1	1.00	1	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.......................................................................	25	1	1.00	1	0	0	1	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTAT.........................................................................	21	1	1.00	1	1	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAA.........................................................................	24	1	1.00	1	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	1.00	1	0	0	0	1
.....................................................................................................................ATTGCTAGCTGCCTTGTGAAGGGCTTA..........................................................................	27	1	1.00	1	0	1	0	0
...........................................................................AGTTTTTCATTTGGCGTGGCTT.........................................................................................................................	22	1	1.00	1	0	0	0	1
....................................................................................................................TATTGCTAGCTGCCTTGTGAAGGGCTTA..........................................................................	28	1	1.00	1	0	0	1	0
...........................................................................AGTTTTTCATTTGGCGTGGCTGAT.......................................................................................................................	24	1	1.00	1	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTACA........................................................................	24	1	1.00	1	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCC............................................................................	20	1	1.00	1	0	0	0	1
...........................................................................AGTTTTTCATTTGGCGTGGCTAGCTCA....................................................................................................................	27	1	1.00	1	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA........................................................................	24	1	1.00	1	0	0	0	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG........................................................................	24	1	1.00	1	0	0	1	0
........................................................................................................................GCTAGCTGCCTTGTGAAGGGCTTA..........................................................................	24	1	1.00	1	0	0	1	0

droSim2

TTTTGT--------TAAAT-----------TTTCCG---CGTGTG-AAAT-----ACGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCAC-TACTTTT-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA--------------TTTTT--T---ATTTTTAT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	1324.00	1324	170	46	15	177	0	6	4	0	1	1	407	497	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	285.00	285	8	1	5	18	4	27	3	1	15	30	105	67	0	1	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGGCTAGC.......................................................................................................................	24	1	85.00	85	15	3	21	1	0	0	0	0	1	0	0	43	0	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	57.00	57	17	1	0	14	0	6	0	1	0	1	17	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	57.00	57	9	2	0	0	5	28	0	0	0	0	13	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	40.00	40	0	0	0	0	1	14	0	0	0	0	25	0	0	0	0	0	0
...............................................................................................................................GCCTTGTGAAGGGCTT...........................................................................	16	1	38.00	38	0	0	0	0	0	0	0	0	0	0	38	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG........................................................................	24	1	17.00	17	0	0	0	0	2	15	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	12.00	12	0	0	0	3	0	0	0	0	0	0	7	0	0	2	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	9.00	9	0	0	0	3	0	0	0	1	0	0	3	0	2	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	9.00	9	0	0	0	7	0	1	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	8.00	8	0	0	0	0	0	0	1	0	0	0	5	0	0	1	0	0	1
...........................................................................AGTTTTTCATTTGGCGTGGCTAG........................................................................................................................	23	1	7.00	7	2	1	1	0	0	0	0	0	0	0	0	2	1	0	0	0	0
...............................................................................................................................GCCTTGTGAAGGGCTTA..........................................................................	17	1	6.00	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	5.00	5	3	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................TGCCTTGTGAAGGGCTT...........................................................................	17	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGGCT..........................................................................................................................	21	1	3.00	3	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	3.00	3	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAGC........................................................................	24	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	2.00	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................CCTTGTGAAGGGCTT...........................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCC............................................................................	20	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	2.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGGCTAA........................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTG.............................................................................................................................	18	1	2.00	2	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGGC...........................................................................................................................	20	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................GCCTTGTGAAGGGCTTT..........................................................................	17	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAA.................................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAG................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGA..............................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGT..............................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCG............................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTTTTTCATTTGGCGTGGCTAGG.......................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................TGCCTTGTGAAGGGCTTT..........................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................TCAC-TACTTTT-TTAATATT..................................................................................................	19	2	1.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGG...............................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................CCTTGTGAAGGGCTTA..........................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................TCATTTGGCGTGGCTAGC.......................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGA.............................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGC.............................................................................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0

dm3

TTGTTA----------AAT-----------TTCCCG---CGTGTG-AAAT-----ACGA-AGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTAC-TCCTTTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTC-CC----GAA---TAATAAA--------------TTTTTC-GACTGTTTAAAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	7300070.00	7300070	0	0	0	0	2	1	0	0	0	4	2	1	2	22	9	0	4	193	0	0	30	44	121	45	0	892	23298	20	1	24	194	180	4	2	15	225	265	138	304	174	283	289	540	146	1266	186	90	79	193	168	763	123	71	66250	12314	2733	1	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	2	8	8	10	392	73	8	3	49	15	2	1	43	16	34	4	2	29	51	27	4	636	250	287	214	34	39	8	1	2	10	62	9	7	27	60	1	20	1	13	15	32	0	46	3	38	43	0	0	0	1	0	0	1	0	0	0	3466	198	766	141	51	1057	377	237	637	388	48488	81	163	275	48	3	0	0	1	4	8910	2637	7508	43196	4861	6793	277	241	0	110	45	27	419	195	24	205	1	76	13	49	11	138	1971	2138	92966	3251	1121	232	145	113	180	27	0	4	160	1	433	802	0	0	0	0	0	271	248	13	1	58	22	0	11	189532	206283	153551	2448	6640	3800	9458	7	10	51	237	16	22	4	87	5995	2	0	6246	0	0	0	0	1402	1549	216	2635	3949	28765	116924	114893	3254	1116	2229	25655	1125	55865	54979	22640	12043	5480	741	63900	18445	66559	12997	3617	2550	483	47713	307805	25054	130441	13997	108619	14181	12493	271	1333	413	1972	422	2519	350	1870	27439	225024	3510	7883	5555	9816	7465	6985	6159	650	6920	3528	3642	1616422	3225	782	1937	942	2457	8519	72	9010	18133	11733	175766	1527	1915	2397	2055	537219	208283	9797	41361	4862	382136	56015	24115	5251	136855	5575	15767	14182	7762	9256	11919	11135	45	92255	952169	204517	169625	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	365806.00	365806	0	0	0	0	21	5	2	3	30	33	1	0	2	62	4	0	0	71	0	0	22	54	22	94	0	74	1972	1	1	18	178	222	1	5	27	33	54	4	31	44	42	111	193	22	148	36	38	29	30	51	423	34	6	1091	355	0	4	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	16	44	0	210	438	12	1053	222	60	6	204	63	6	6	124	85	221	58	43	102	162	197	21	1256	128	204	919	40	60	30	9	168	132	96	39	1	365	4	2	2	0	2	1	6	0	275	17	283	221	0	0	0	0	2	1	0	0	0	0	147	9	75	15	6	123	116	32	169	66	4482	2	16	26	11	0	1	6	0	2	1067	151	580	2058	430	408	886	1130	0	635	6	1	484	248	18	194	1	404	24	347	23	47	311	305	1911	66	1338	52	38	11	14	3	1	0	53	8	29	30	0	0	0	0	0	142	40	3	0	8	0	0	0	22331	17170	11413	266	2575	764	1575	39	63	53	296	34	61	13	255	3039	4	9	2259	0	0	0	0	1101	1261	5	184	147	1205	5998	3786	710	52	46	1111	31	1336	1555	681	593	147	21	3544	1457	4833	1142	356	215	45	4099	23181	3743	13588	1293	10272	1071	700	23	113	36	189	54	381	50	283	1184	7529	687	623	401	328	374	256	164	262	1464	444	562	37005	83	73	225	119	301	538	1	392	446	691	8983	111	81	148	72	34642	12164	1032	1441	188	14853	1743	5195	179	6375	142	424	316	162	328	252	263	0	3149	20666	10097	3649	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	140583.00	140583	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	3	2	4	11	0	15	486	0	1	0	15	11	0	0	48	2	9	1	7	4	9	12	22	2	51	2	2	3	1	9	29	4	3	513	175	156	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	36	1	1	0	1	0	1	0	0	0	2	0	0	2	0	0	0	55	47	90	5	0	1	1	0	2	0	5	0	0	34	6	0	0	0	2	2	4	0	21	2	23	25	0	0	0	0	0	0	0	0	0	0	47	3	15	6	0	21	9	2	11	6	814	0	0	6	1	1	1	0	0	0	820	295	493	1279	431	478	78	104	0	34	1	0	58	13	0	18	1	32	0	29	5	0	158	311	1614	40	191	6	9	0	1	0	0	0	5	0	3	0	0	0	0	0	0	6	2	0	0	0	1	0	0	3928	3964	3052	48	78	158	290	0	0	0	3	1	0	0	2	345	0	0	361	0	0	0	0	62	63	20	62	74	103	615	1000	3	8	10	133	7	612	1031	409	113	76	15	872	380	864	124	40	56	11	2018	19186	1130	7293	655	8155	885	565	0	11	2	15	0	14	7	17	317	6303	64	256	129	285	206	183	212	20	119	69	79	38552	88	7	17	3	2	107	0	107	269	98	2543	27	11	43	2	309	207	27	59	38	1110	83	34	22	73	25	179	210	93	86	106	144	0	1157	17737	193	173	0
...........................................................................AGTTTTTCATTTGGCCTGGCTAGC.......................................................................................................................	24	1	22741.00	22741	0	0	0	0	3	0	0	0	0	4	0	0	0	4	0	0	2	1	0	0	0	0	0	0	0	0	1	0	1	0	2	12	0	1	0	0	1	0	0	0	0	0	2	0	3	0	1	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	42	47	0	17	0	2	0	3	0	0	0	17	5	9	1	0	0	1	3	1	29	0	1	3	0	0	1	0	4	3	3	0	0	7	6	0	0	0	4	4	26	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	20	1	0	0	0	73	35	24	3	44	5	0	8	0	0	0	14	27	0	3	1	0	3	12	0	3	1	36	5	15	12	0	4	6	5	0	5	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	146	122	93	2	35	1	0	47	25	16	62	39	75	15	10	4280	868	994	3520	0	0	0	0	2	0	0	5	12	493	937	227	635	8	2	405	6	168	121	138	84	26	2	72	121	81	64	5	3	2	45	191	52	210	31	153	7	21	0	1	0	5	0	1	0	1	52	33	13	9	1	10	1	9	3	12	18	1	1	339	0	0	3	1	3	2	0	0	0	322	244	3	0	0	21	207	82	18	7	0	218	24	158	9	11	0	4	6	2	1	0	0	0	1270	1211	2523	539	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	14710.00	14710	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	17	0	0	0	1	1	8	0	4	62	0	0	0	0	0	0	0	0	0	2	0	0	2	2	4	5	1	18	1	1	1	0	1	4	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	6	2	0	42	7	2	0	3	13	0	0	1	5	19	0	0	6	5	16	4	54	33	40	12	3	3	0	0	1	2	5	1	0	14	0	0	0	0	0	0	1	0	28	0	54	13	0	0	0	0	0	0	0	0	0	0	5	2	2	0	0	2	0	1	2	0	303	1	2	0	1	0	0	0	0	0	143	51	102	188	66	41	96	104	0	74	0	0	74	10	0	7	0	34	2	30	0	0	7	74	179	6	202	4	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	6	3	0	0	0	0	0	0	432	305	197	5	94	27	88	0	0	1	4	0	0	0	0	34	0	0	33	0	0	0	0	9	5	1	2	8	72	188	160	6	3	9	36	6	69	113	29	7	4	1	188	44	187	10	4	6	0	192	1116	103	470	67	353	46	24	0	3	0	12	0	7	0	6	68	576	14	28	9	33	26	25	34	1	3	17	14	2368	22	1	2	2	8	22	0	13	36	13	128	3	1	3	1	798	153	14	31	2	388	79	21	4	200	20	69	41	16	11	23	27	0	116	1342	268	461	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	14518.00	14518	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	2	47	0	0	0	0	0	0	0	0	3	3	1	6	1	1	1	3	0	2	2	2	1	1	1	9	0	0	156	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	2	7	0	0	6	4	3	3	2	201	0	2	3	0	0	0	0	0	0	9	0	5	61	0	1	1	3	0	0	0	0	3	1	0	1	0	0	0	2	0	0	0	0	225	11	4	0	0	0	1	0	0	0	2	1	4	9	0	0	0	0	0	5	2	0	0	0	0	0	0	268	317	220	13	26	13	37	0	0	0	0	0	0	0	0	12	0	0	18	0	0	0	0	3	5	0	10	11	73	202	159	44	7	8	87	8	112	221	22	20	5	7	135	35	245	32	9	3	1	210	236	46	457	23	131	37	38	3	9	4	14	1	10	4	15	38	858	25	10	10	38	23	23	23	4	12	11	9	926	5	5	23	7	16	34	1	42	49	14	187	5	10	11	6	2061	444	93	80	14	1602	102	286	15	222	11	69	37	18	32	32	19	1	206	994	901	333	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	14230.00	14230	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	2	5	0	0	0	0	0	1	2	0	0	1	0	0	0	1	0	0	0	4	0	0	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	1	0	0	2	0	1	4	6	0	0	3	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	5	1	0	0	2	65	0	0	0	0	0	0	0	0	0	29	4	23	45	1	16	0	3	0	0	1	0	0	0	0	0	0	0	1	2	2	0	16	8	322	11	5	0	4	0	1	0	0	0	0	0	1	0	0	0	0	0	0	2	1	0	0	1	0	0	0	168	143	161	6	24	36	86	0	0	0	0	0	0	0	0	95	11	8	84	0	0	0	0	11	12	1	2	4	18	46	122	1	1	5	10	0	161	533	89	50	31	1	87	17	56	13	8	7	5	170	768	111	273	50	364	39	22	0	0	0	0	0	1	0	2	11	1644	21	25	11	31	12	22	14	2	23	4	3	2273	3	1	0	0	0	12	2	11	27	65	127	1	0	2	1	129	80	17	4	4	116	11	12	6	11	5	33	49	15	16	11	19	3	311	4436	34	21	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	10317.00	10317	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	3	0	3	19	0	1	0	3	1	0	1	1	0	3	0	0	2	1	0	0	0	10	1	1	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	2	8	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	5	1	3	0	0	3	1	1	0	1	78	0	0	0	0	0	0	0	0	0	35	7	38	99	2	21	4	3	0	1	0	1	1	1	0	3	1	0	1	2	0	0	25	14	251	4	8	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	6	3	0	0	0	0	0	0	215	204	109	13	15	28	66	0	0	0	0	0	0	0	0	57	2	4	58	0	0	0	0	17	14	4	7	7	20	70	186	2	1	1	15	1	166	486	106	28	21	3	54	19	54	5	1	5	1	191	1279	99	448	59	646	40	33	1	2	1	1	0	1	0	5	9	986	10	9	4	30	23	23	16	1	17	7	5	1410	4	0	1	0	0	2	0	5	27	21	229	1	0	3	1	69	24	4	8	4	55	9	5	1	8	2	9	32	18	5	7	20	0	48	1514	33	20	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	9378.00	9378	0	0	0	0	1	0	0	0	0	0	0	0	1	9	0	0	0	1	0	0	0	0	0	1	0	0	22	0	0	0	0	0	0	0	0	1	2	1	0	0	2	11	18	1	9	1	1	0	1	0	17	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	5	5	2	85	6	1	0	4	4	1	0	4	4	8	0	0	3	9	29	0	96	127	141	30	2	1	1	0	1	0	19	1	0	18	0	0	0	0	1	0	2	1	24	1	13	11	0	0	0	0	0	0	0	0	0	0	2	2	8	0	4	3	4	3	7	5	187	0	0	0	2	0	0	0	0	0	118	39	42	38	88	37	50	74	0	51	0	0	46	21	0	12	0	23	0	20	0	0	22	35	32	1	132	2	5	0	1	0	0	0	1	4	0	8	0	0	0	0	0	10	1	0	0	0	0	0	0	228	168	80	4	88	15	28	1	0	0	9	0	1	0	4	68	0	0	47	0	0	0	0	6	2	0	9	4	30	136	108	16	0	4	18	0	19	66	15	6	3	1	110	49	201	23	8	1	0	112	383	104	466	25	221	52	31	2	6	3	4	1	7	0	9	28	374	49	21	15	16	7	15	13	4	10	12	11	1028	2	2	9	2	6	11	1	7	14	4	79	0	4	2	0	656	217	36	36	2	345	33	123	0	136	5	21	14	5	15	10	7	0	66	383	354	259	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	8349.00	8349	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	1	1	0	0	45	15	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	33	0	0	0	0	0	0	0	0	0	6	1	1	73	8	2	2	0	0	0	0	0	3	0	0	2	0	0	0	0	0	0	2	0	48	2	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	303	225	132	4	2	3	18	0	0	0	1	0	0	0	0	6	0	0	3	0	0	0	0	3	6	1	4	4	33	110	128	3	1	2	28	1	54	38	26	15	7	1	56	19	68	11	2	4	0	45	278	24	157	14	107	13	9	1	2	1	1	4	4	0	1	27	621	6	43	21	14	7	9	8	0	5	3	2	1699	24	1	4	3	3	19	0	13	28	66	103	1	1	0	2	581	209	4	26	7	323	59	35	5	105	4	14	11	6	15	19	11	1	84	1382	270	172	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	7176.00	7176	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	1	2	0	57	0	2	0	0	0	0	0	0	0	10	0	10	22	8	0	1	1	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1	0	46	2	0	0	0	0	1	0	0	0	0	0	1	2	0	0	0	0	0	0	1	0	0	0	0	0	0	78	100	59	0	4	1	3	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	2	2	0	4	2	47	144	144	6	0	0	27	2	92	76	34	19	6	2	82	20	75	15	5	1	0	55	316	42	145	18	106	14	20	0	1	0	0	0	5	0	1	43	100	1	0	6	8	12	12	5	1	16	2	1	1955	1	1	0	2	2	9	0	12	9	15	93	1	0	5	3	810	193	25	49	7	562	72	41	7	205	7	19	16	13	14	23	10	0	67	677	32	40	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	6689.00	6689	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	242	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	1	1	0	67	1	75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	3	4	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	55	0	0	0	0	0	0	0	0	0	15	0	13	79	14	18	3	9	0	1	1	0	7	1	0	1	0	0	0	1	0	0	4	1	528	18	12	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	155	177	132	3	3	4	2	0	0	0	1	1	0	0	1	3	0	0	0	0	0	0	0	1	0	1	3	2	29	68	53	4	2	1	19	0	84	75	22	9	7	0	68	16	53	13	4	2	0	31	239	12	111	11	99	16	14	1	2	1	1	0	2	3	5	32	161	4	10	3	10	7	8	7	2	6	3	2	1630	4	0	0	2	1	4	0	7	12	8	218	0	2	6	2	357	125	9	13	1	247	35	10	6	68	5	14	17	3	6	8	8	0	75	738	18	7	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	4602.00	4602	0	0	0	0	0	1	0	0	1	0	0	0	0	2	0	0	0	3	0	0	0	1	0	0	0	0	17	0	0	0	0	0	0	0	0	2	1	1	3	1	0	13	10	2	1	3	2	2	1	3	36	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	9	1	6	2	0	36	3	0	0	2	3	0	0	7	3	6	1	0	2	4	4	0	42	24	18	8	1	1	0	0	3	1	1	3	0	15	0	0	0	0	0	0	0	0	8	0	2	5	0	0	0	0	0	0	0	0	0	0	20	2	14	0	0	11	6	0	5	5	62	0	0	3	0	0	0	0	0	0	45	0	15	22	42	6	35	38	0	19	0	0	6	10	0	2	0	4	0	8	4	0	6	21	20	0	28	0	2	0	1	0	0	0	3	3	1	0	0	0	0	0	0	18	4	0	2	0	0	0	0	209	108	55	22	44	25	16	3	0	0	3	1	1	0	15	39	0	0	28	0	0	0	0	6	8	0	3	4	14	78	32	4	2	1	12	0	10	64	7	9	6	0	33	18	57	13	3	0	0	128	234	47	201	27	79	21	10	1	3	0	4	4	9	3	19	11	84	16	14	5	9	8	4	9	2	2	7	8	278	2	4	10	5	14	17	0	11	4	4	76	0	6	2	0	433	82	15	20	3	229	28	48	3	81	4	8	8	2	7	3	5	0	31	251	110	54	0
...........................................................................AGTTTTTCATTTGGCCTGGCTAG........................................................................................................................	23	1	4164.00	4164	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	3	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	6	1	0	2	0	0	0	0	2	0	0	2	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	23	18	138	17	37	4	0	0	1	6	0	4	7	0	2	0	0	0	2	0	1	0	5	1	2	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	47	21	0	13	1	0	1	4	1	8	5	7	2	2	383	39	48	392	0	0	0	0	2	2	0	2	3	29	56	12	14	0	1	16	1	12	7	10	5	7	0	31	31	24	11	4	0	3	7	117	27	73	11	92	6	6	0	0	1	6	0	4	1	3	31	21	5	9	1	1	3	1	3	5	3	2	2	266	0	0	1	0	2	0	0	0	1	42	249	3	0	1	2	121	69	5	9	2	145	9	37	3	26	0	2	3	0	3	0	1	0	171	368	389	122	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	3041.00	3041	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	10	0	1	0	0	0	3	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	10	3	3	0	0	0	0	0	0	0	0	0	0	40	0	0	0	0	0	0	0	0	26	2	77	12	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	20	0	0	0	0	0	0	0	0	0	9	1	3	11	12	2	13	10	0	2	0	0	2	0	0	0	0	0	0	0	0	0	1	6	14	2	3	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	74	42	40	3	2	1	7	0	0	0	0	0	0	0	0	13	0	0	11	0	0	0	0	4	2	0	0	4	44	81	98	3	0	1	12	0	45	31	11	5	2	0	57	8	52	10	4	1	0	30	165	18	111	8	62	7	8	0	2	0	0	0	2	0	2	3	54	2	3	1	1	1	2	4	2	3	3	6	852	0	5	0	1	0	5	0	3	2	8	38	1	0	0	0	145	41	0	6	0	64	5	6	0	11	1	3	1	2	0	2	0	0	9	234	42	32	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	2871.00	2871	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	14	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	1	3	0	1	0	0	0	2	0	0	11	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	2	0	0	0	7	1	1	0	5	38	0	0	0	0	0	0	0	0	0	8	0	6	39	1	12	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	5	46	2	6	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	4	0	0	2	0	0	0	120	74	73	1	0	10	6	0	0	0	0	0	0	0	0	3	0	0	3	0	0	0	0	3	0	0	1	5	11	27	39	3	1	3	11	0	18	27	7	2	3	0	21	4	23	5	1	1	0	36	103	15	98	8	71	9	10	0	4	2	1	0	3	0	1	14	283	6	17	13	12	8	9	4	5	0	0	0	463	8	1	1	0	2	9	0	6	13	63	38	4	0	3	0	121	32	3	8	0	129	8	4	0	27	1	7	5	3	0	2	4	0	14	266	64	74	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	2857.00	2857	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	11	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	9	0	0	1	0	0	0	0	0	0	3	0	15	16	1	7	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	11	50	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	21	35	0	1	8	3	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	4	34	116	126	0	0	1	15	1	21	40	12	2	1	0	26	9	17	5	1	3	1	20	107	13	55	4	38	5	8	2	1	0	0	1	0	0	1	47	957	19	83	25	25	37	35	4	0	1	2	1	208	28	1	0	5	1	10	0	13	34	32	8	1	0	0	0	46	5	0	8	0	63	2	0	1	14	1	3	0	2	0	1	0	0	12	105	24	36	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	2823.00	2823	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	0	0	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	2	0	0	0	0	26	0	0	0	0	0	0	0	0	0	7	2	0	24	4	0	4	5	0	5	0	0	3	0	0	0	0	1	0	3	0	0	2	0	34	1	5	1	0	1	0	1	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	46	44	39	0	7	1	7	0	0	0	0	0	0	0	0	4	0	0	1	0	0	0	0	3	2	0	4	3	17	26	55	0	0	2	19	1	23	36	6	1	1	3	41	7	31	3	0	4	0	38	90	14	103	3	38	7	4	0	2	1	1	0	1	0	1	10	264	0	1	2	8	2	2	6	0	2	3	3	388	1	1	1	0	1	4	0	4	7	4	28	2	2	0	0	267	37	3	11	0	291	12	6	0	43	4	9	7	8	3	6	2	0	25	201	120	115	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	2458.00	2458	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	1	1	0	1	0	0	1	3	0	0	0	0	0	0	2	5	1	0	0	0	0	4	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	9	1	0	0	0	0	0	0	1	2	0	0	0	2	0	1	0	17	8	10	1	2	2	0	0	0	1	2	0	0	2	0	0	0	0	0	0	0	0	2	0	4	0	0	0	0	0	0	0	0	0	0	0	2	1	2	0	0	2	3	0	2	1	21	0	0	0	0	0	0	0	0	0	12	0	4	12	10	5	1	4	0	0	0	0	5	4	0	3	0	0	0	2	0	0	2	0	16	0	10	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	71	59	42	7	15	4	10	0	0	1	0	0	0	0	1	15	0	0	14	0	0	0	0	1	2	0	2	2	6	45	23	8	0	1	8	0	11	24	5	1	1	0	26	15	40	6	1	1	0	35	88	27	142	9	74	16	8	2	1	0	3	1	2	0	3	7	90	10	4	7	4	1	2	1	1	3	2	1	341	1	2	3	2	4	6	1	0	3	3	46	0	0	2	0	218	72	10	11	2	112	13	32	3	30	0	1	4	0	2	1	0	0	16	112	100	59	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	2331.00	2331	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	9	10	0	32	0	10	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	47	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	105	37	1	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	0	1	0	9	23	33	0	0	0	6	2	22	24	16	2	3	0	27	7	23	4	0	1	0	17	100	6	44	2	29	4	3	0	0	1	1	1	1	0	0	16	396	3	2	3	6	4	2	0	0	2	1	0	582	4	0	1	0	2	3	0	4	3	1	30	1	0	0	1	137	29	3	12	1	84	7	4	1	27	2	6	3	4	1	0	4	0	15	135	6	1	0
...........................................................................AGTTTTTCATTTGGCCTGGCT..........................................................................................................................	21	1	1350.00	1350	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	4	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	1	0	1	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	2	0	0	0	0	2	0	0	1	5	0	1	35	2	2	55	0	0	0	0	1	0	0	0	0	4	2	5	1	0	0	4	0	3	13	2	0	1	0	5	2	1	2	0	0	0	3	139	6	16	1	17	2	5	0	0	0	0	0	1	0	0	1	12	1	1	0	2	0	1	0	0	0	0	0	15	0	0	0	0	1	0	0	0	0	8	23	0	0	0	1	3	4	1	2	0	13	1	0	0	1	0	0	0	1	0	0	0	0	41	616	24	155	0
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	909.00	909	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	1	38	0	0	0	0	0	0	0	0	0	13	0	10	16	25	45	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	65	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	113	78	68	0	0	4	1	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	1	1	0	0	0	1	6	3	0	0	0	1	0	6	8	2	1	2	0	6	2	7	0	0	1	0	4	11	6	15	1	11	0	4	0	0	0	0	0	0	0	0	2	32	1	0	0	0	1	2	0	0	1	3	0	166	1	0	1	0	0	1	0	0	0	5	23	0	0	0	0	20	14	0	0	0	14	7	0	0	4	0	1	1	0	0	0	0	0	1	8	2	1	0
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.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	296.00	296	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	0	2	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	14	3	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	1	1	0	0	0	1	5	4	0	0	0	1	0	1	2	0	0	0	0	8	3	6	2	0	1	0	4	18	2	19	1	8	0	0	0	0	0	0	0	0	0	0	2	2	0	0	1	0	0	0	0	0	5	0	1	49	0	0	0	0	0	0	0	0	0	0	8	0	0	1	0	37	7	0	0	0	15	1	8	1	4	0	0	3	0	0	0	1	0	1	12	0	0	0
..............................................................................................................................TGCCTTGTGAAGGGCTT...........................................................................	17	1	282.00	282	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	82	116	61	3	2	7	6	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCG............................................................................	20	1	280.00	280	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	1	7	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	24	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	5	3	1	0	1	0	3	0	2	0	0	0	0	5	24	0	12	1	2	0	0	0	0	0	0	0	1	0	0	6	110	1	10	2	2	1	3	1	0	0	0	0	12	1	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0

droEug1

GAGTTTTGGTTAAATGAGT------TG-A-ATTGCG---CGTTTG-GAAA-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGAC-CTTTGTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AGG---ATAAATG--------------TCCTT--------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GAGTTG--------TGAGT-----------TGTGCGCG--GTTTC-GGCG-----GCGA-GGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTAC-TCCTG-T-TCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTG-----------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AAGTTGAT------TAAAT-----------TTCCCGCGGTTTGCA-GAAT-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGAC-TTCTGTT-TAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTG-GC----AGG---ATGTGTG--------------TCCTG--GATTTTTCGAGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GAGTTAAG------TGAAT----ATTGGTTTTGCCG---CATCTGAGAAA-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGAC-TTTTGTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-AC----TGGGATATATATG--------------TCCTT--GGTTATTCTGGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GAGTTAAG------TGAAT----AT-------T--------TG-G-GAAA-----GTGA-AGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGAC-TTCTGTT-AAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AAGG--ATATATG--------------TCCTT--AATTGTCCTGGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AAGT-----------------------------------------------------GA-AGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGAC-TTCTGTT-TAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTG-AC----TGAGATATATATA--------------TCCTT--GAATATTCGGGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ATGTGAAGGAAAAGCAAGT----------------G---CCTGTG-GAAG-----TGCT-AGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTGAC-TTTC--A-TAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGG-AA----AGA---GGATATA---------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ATATTTAA------AAAGT----GA-------T---------AAG-AAATGTCCTAGGA-AGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGAC-TTTAA-A-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GC----AGA---ATATGTAAAGGACTTAGTGTTTTTTTCTTTTTTTTTAAAG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	28659.00	28659	952	32	79	3458	10045	14093
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	1822.00	1822	283	14	5	527	501	492
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	246.00	246	100	1	0	126	3	16
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	238.00	238	57	0	0	52	76	53
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	182.00	182	1	0	0	1	90	90
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	120.00	120	5	0	0	34	31	50
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	96.00	96	72	0	0	7	6	11
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	96.00	96	0	1	0	5	52	38
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	82.00	82	0	0	0	2	62	18
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	66.00	66	30	0	0	18	7	11
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	62.00	62	23	0	0	17	12	10
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	45.00	45	3	0	0	18	9	15
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	37.00	37	6	1	0	5	2	23
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	31.00	31	7	0	0	9	11	4
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	31.00	31	28	0	0	2	1	0
...........................................................................AGCCTCTCATTTGGCCTGCCTAGC.......................................................................................................................	24	1	30.00	30	26	4	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	22.00	22	2	5	0	14	0	1
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	12.00	12	3	0	0	6	2	1
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	9.00	9	4	0	0	1	3	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	8.00	8	1	0	0	6	0	1
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	7.00	7	7	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	5.00	5	1	0	0	2	0	2
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	5.00	5	0	0	0	2	1	2
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	5.00	5	1	0	0	0	3	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT........................................................................	24	1	4.00	4	2	0	0	0	1	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	4.00	4	1	0	0	0	2	1
...........................................................................AGCCTCTCATTTGGCCTGCCTAG........................................................................................................................	23	1	4.00	4	3	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.........................................................................	23	1	4.00	4	0	0	0	0	1	3
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	3.00	3	2	0	0	0	1	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.........................................................................	22	1	3.00	3	3	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.........................................................................	22	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTGT.........................................................................	23	1	2.00	2	0	0	0	2	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTAT..........................................................................	22	1	2.00	2	0	0	0	1	0	1
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.........................................................................	22	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCG............................................................................	20	1	1.00	1	0	0	0	1	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA........................................................................	24	1	1.00	1	1	0	0	0	0	0

droBip1

A-----------------------------------------------------------AGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGAC-TTTAA-A-TTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GA----AAA---ATATTTA---------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

GAGTGA--------CAAATTTCT-GTG-AATTCCCG---CC-AC--AAAA-----GAGA-AACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGAC-TTGTT-T-CTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	10506.00	10506	0	2346	44	60	505	3809	3737	0	5	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	1895.00	1895	0	713	20	17	87	798	217	2	40	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	532.00	532	0	353	4	6	4	161	4	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGC.......................................................................................................................	24	1	466.00	466	0	235	99	113	14	5	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	253.00	253	0	162	0	3	1	61	26	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	193.00	193	0	180	0	0	0	11	2	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAG........................................................................................................................	23	1	184.00	184	0	170	5	3	3	2	0	1	0	0
...........................................................................AGTCTCTCACATGGCTGGTC...........................................................................................................................	20	1	180.00	180	0	177	1	2	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCT..........................................................................................................................	21	1	126.00	126	2	120	1	2	0	1	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	110.00	110	0	93	0	0	1	13	2	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	86.00	86	1	66	4	2	0	12	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	75.00	75	0	61	1	0	0	10	3	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	49.00	49	0	48	0	0	0	0	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	48.00	48	0	41	0	0	1	6	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTA.........................................................................................................................	22	1	32.00	32	1	28	0	3	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	29.00	29	0	29	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	29.00	29	0	19	0	0	0	6	4	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	22.00	22	0	14	0	0	0	3	5	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	19.00	19	0	1	4	3	1	6	4	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	18.00	18	0	18	0	0	0	0	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTCTAGC.......................................................................................................................	23	1	17.00	17	0	17	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGT.......................................................................................................................	24	1	16.00	16	0	15	0	0	1	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	15.00	15	0	5	1	1	0	4	4	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	14.00	14	0	4	0	0	0	8	2	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	13.00	13	0	10	0	0	2	1	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTC...........................................................................................................................	19	1	12.00	12	0	12	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGT............................................................................................................................	19	1	11.00	11	0	11	0	0	0	0	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTCTAG........................................................................................................................	22	1	11.00	11	0	11	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGCT......................................................................................................................	25	1	8.00	8	0	8	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGC.............................................................................	18	1	8.00	8	0	8	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	8.00	8	0	1	0	0	0	6	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	7.00	7	0	3	0	0	0	2	2	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTT.........................................................................................................................	22	1	7.00	7	0	6	0	1	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	6.00	6	0	4	0	0	0	1	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGTT.............................................................................	19	1	6.00	6	0	5	0	0	0	1	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.........................................................................	22	1	6.00	6	0	6	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGCA......................................................................................................................	25	1	6.00	6	0	5	0	0	1	0	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTCT..........................................................................................................................	20	1	6.00	6	0	6	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGG.............................................................................................................................	18	1	5.00	5	0	5	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.........................................................................	22	1	5.00	5	0	5	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	5.00	5	0	1	1	0	0	3	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	4.00	4	0	1	0	0	0	2	0	0	0	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	3.00	3	0	2	0	0	0	1	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCT............................................................................	21	1	3.00	3	0	1	0	1	0	0	1	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTA..........................................................................	20	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	3.00	3	0	1	0	0	0	1	1	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAT.........................................................................	24	1	3.00	3	0	2	0	0	0	0	1	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCC..........................................................................................................................	21	1	3.00	3	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT........................................................................	24	2	3.00	6	0	5	0	0	0	1	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAT........................................................................................................................	23	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAT........................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCA..........................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCC............................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0
..............................................................................CTCTCACATGGCTGGTCTAG........................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGC.............................................................................	20	1	2.00	2	0	1	0	1	0	0	0	0	0	0
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTC..........................................................................	21	1	2.00	2	0	1	1	0	0	0	0	0	0	0
............................................................................GTCTCTCACATGGCTGGT............................................................................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGA.............................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.........................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGCTT.....................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................CTCACATGGCTGGTCTAGC.......................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................TGCCTTGTGAAGGGCTTAA.........................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTCTTT........................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGCC......................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTCTAGT.......................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTAT.........................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................GTCTCTCACATGGCTGGTCTA.........................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................TGAC-TTGTT-T-CTAATATTGC................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droPer2

GAGTGA--------CAAAGTTCT-GTG-AATTCCCG---CC-AC--AAAA-----GAGA-AACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGAC-TTGTT-T-CTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	28972.00	28972	4	520	175	4070	13752	10451
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	3275.00	3275	2	160	20	766	2063	264
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	785.00	785	3	46	2	144	563	27
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	320.00	320	0	49	0	40	176	55
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	119.00	119	0	35	0	11	68	5
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	63.00	63	0	13	0	12	35	3
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	55.00	55	0	10	0	12	31	2
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	52.00	52	1	1	0	15	34	1
...........................................................................AGTCTCTCACATGGCTGGTCTAG........................................................................................................................	23	1	49.00	49	0	41	3	1	4	0
...........................................................................AGTCTCTCACATGGCTGGTCTAGC.......................................................................................................................	24	1	46.00	46	0	35	9	0	2	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	45.00	45	0	4	0	7	27	7
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	38.00	38	0	0	0	10	16	12
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	35.00	35	0	1	0	5	29	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	30.00	30	0	1	0	5	17	7
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	28.00	28	0	0	0	4	22	2
...........................................................................AGTCTCTCACATGGCTGGTC...........................................................................................................................	20	1	26.00	26	0	24	0	0	2	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	23.00	23	0	14	0	4	5	0
...........................................................................AGTCTCTCACATGGCTGGTCT..........................................................................................................................	21	1	21.00	21	5	15	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	21.00	21	0	5	0	4	9	3
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	16.00	16	0	1	0	2	4	9
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	15.00	15	0	0	0	2	13	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	12.00	12	0	1	0	1	9	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	11.00	11	0	1	1	2	6	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	10.00	10	0	0	0	1	8	1
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	9.00	9	0	2	0	4	3	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	8.00	8	0	1	0	1	6	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	7.00	7	0	1	0	0	6	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	6.00	6	0	3	0	1	2	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGA.............................................................................	19	1	5.00	5	0	0	0	0	1	4
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	4.00	4	0	1	0	0	2	1
..........................................................................................................................TAGCTGCCTTGTGAAGGT..............................................................................	18	1	4.00	4	0	0	0	0	4	0
...........................................................................AGTCTCTCACATGGCTGGTCTA.........................................................................................................................	22	1	4.00	4	0	4	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCA............................................................................	20	1	3.00	3	0	0	0	0	3	0
............................................................................GTCTCTCACATGGCTGGTCTAG........................................................................................................................	22	1	3.00	3	0	3	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.........................................................................	23	1	3.00	3	0	0	0	1	1	1
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	3.00	3	0	2	0	0	1	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	2.00	2	0	0	0	1	1	0
...................................................................................................TGAC-TTGTT-T-CTAATACTGC................................................................................................	20	1	2.00	2	0	2	0	0	0	0

droWil2

-----------------------------------------------------------------ATTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTATTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTGTTGAACAACAA-AA----AAA---AA--------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTA..........................................................................	22	1	7660.00	7660	6	461	713	5543	937
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTT...........................................................................	21	1	5689.00	5689	16	784	1433	1996	1460
...........................................................................AGTCTTTCACTGGGCGTGCTTAGC.......................................................................................................................	24	1	880.00	880	0	6	3	775	96
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTT..........................................................................	22	1	232.00	232	1	79	45	62	45
...........................................................................AGTCTTTCACTGGGCGTGCTTAGCT......................................................................................................................	25	1	131.00	131	0	4	2	109	16
.........................................................................................................................CTAGCTGCCTTGTGAAGTGCTT...........................................................................	22	1	126.00	126	0	13	20	72	21
.............................................................................TCTTTCACTGGGCGTGCTTAGCT......................................................................................................................	23	1	119.00	119	2	1	1	85	30
..........................................................................................................................TAGCTGCCTTGTGAAGTGCT............................................................................	20	1	96.00	96	3	26	27	13	27
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTAA.........................................................................	23	1	93.00	93	0	8	20	54	11
...........................................................................AGTCTTTCACTGGGCGTGCTTAG........................................................................................................................	23	1	77.00	77	0	12	1	59	5
.........................................................................................................................CTAGCTGCCTTGTGAAGTGCTTA..........................................................................	23	1	70.00	70	0	5	1	62	2
...........................................................................................................................AGCTGCCTTGTGAAGTGCTT...........................................................................	20	1	59.00	59	0	56	1	1	1
.............................................................................TCTTTCACTGGGCGTGCTTAG........................................................................................................................	21	1	41.00	41	5	22	4	3	7
..........................................................................................................................TAGCTGCCTTGTGAAGTGC.............................................................................	19	1	36.00	36	0	6	0	16	14
...........................................................................................................................AGCTGCCTTGTGAAGTGCTTA..........................................................................	21	1	34.00	34	0	28	0	6	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTAT.........................................................................	23	1	29.00	29	0	12	8	4	5
...........................................................................AGTCTTTCACTGGGCGTGCTT..........................................................................................................................	21	1	18.00	18	0	5	4	4	5
.............................................................................TCTTTCACTGGGCGTGCTT..........................................................................................................................	19	1	18.00	18	0	5	2	1	10
.........................................................................................................................CTAGCTGCCTTGTGAAGTGCT............................................................................	21	1	15.00	15	0	0	2	10	3
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTAAA........................................................................	24	1	15.00	15	0	4	1	8	2
...........................................................................AGTCTTTCACTGGGCGTGCTTA.........................................................................................................................	22	1	14.00	14	0	4	1	9	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTTT.........................................................................	23	1	14.00	14	0	3	6	2	3
.........................................................................................................................CTAGCTGCCTTGTGAAGTGC.............................................................................	20	1	13.00	13	0	1	0	7	5
...................................................................................................TAGAAATTTATTTACCATATTGC................................................................................................	23	1	13.00	13	0	1	0	12	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTAG.........................................................................	23	1	11.00	11	0	2	4	2	3
.........................................................................................................................CTAGCTGCCTTGTGAAGTGCTTT..........................................................................	23	1	10.00	10	0	3	1	6	0
.............................................................................TCTTTCACTGGGCGTGCTTAGCTA.....................................................................................................................	24	1	9.00	9	0	3	0	6	0
...........................................................................AGTCTTTCACTGGGCGTGCTTAGA.......................................................................................................................	24	1	8.00	8	0	0	0	6	2
.............................................................................TCTTTCACTGGGCGTGCTTAGC.......................................................................................................................	22	1	8.00	8	0	2	0	5	1
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTC..........................................................................	22	1	7.00	7	0	3	1	3	0
........................................................................................................................GCTAGCTGCCTTGTGAAGTGCT............................................................................	22	1	6.00	6	0	0	0	4	2
..........................................................................................................................TAGCTGCCTTGTGAAGTG..............................................................................	18	1	6.00	6	0	2	0	4	0
............................................................................................................................GCTGCCTTGTGAAGTGCTTA..........................................................................	20	1	6.00	6	0	1	2	2	1
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTG..........................................................................	22	1	6.00	6	0	1	2	2	1
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTC...........................................................................	21	1	5.00	5	0	2	1	0	2
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTA...........................................................................	21	1	5.00	5	0	1	1	2	1
.......................................................................................................................TGCTAGCTGCCTTGTGAAGTGCT............................................................................	23	1	4.00	4	0	0	1	0	3
...................................................................................................................ATATTGCTAGCTGCCTTGTGAAGTGCT............................................................................	27	1	4.00	4	0	0	0	4	0
..............................................................................................................................................TACGTGTAATTGTTGAACAACAA-A...................................................	24	1	4.00	4	0	0	0	2	2
.............................................................................................................................CTGCCTTGTGAAGTGCTT...........................................................................	18	1	4.00	4	0	3	0	1	0
............................................................................................................................GCTGCCTTGTGAAGTGCTT...........................................................................	19	1	4.00	4	0	2	0	1	1
........................................................................................................................GCTAGCTGCCTTGTGAAGTGCTT...........................................................................	23	1	4.00	4	0	0	0	4	0
...........................................................................AGTCTTTCACTGGGCGTGCTTT.........................................................................................................................	22	1	4.00	4	0	2	0	0	2
............................................................................GTCTTTCACTGGGCGTGCTTAGC.......................................................................................................................	23	1	3.00	3	0	1	0	2	0
.............................................................................................................................CTGCCTTGTGAAGTGCTTA..........................................................................	19	1	3.00	3	0	3	0	0	0
...........................................................................AGTCTTTCACTGGGCGTGCTAGC........................................................................................................................	23	1	3.00	3	0	0	0	3	0
...........................................................................................................................AGCTGCCTTGTGAAGTGCTTT..........................................................................	21	1	3.00	3	0	3	0	0	0
.............................................................................TCTTTCACTGGGCGTGCTTA.........................................................................................................................	20	1	3.00	3	0	1	1	0	1
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTG...........................................................................	21	1	2.00	2	0	0	2	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTAC.........................................................................	23	1	2.00	2	0	0	0	2	0
...........................................................................AGTCTTTCACTGGGCGTGCTTAGCA......................................................................................................................	25	1	2.00	2	0	0	0	2	0
...........................................................................................................................AGCTGCCTTGTGAAGTGC.............................................................................	18	1	2.00	2	0	2	0	0	0
.............................................................................TCTTTCACTGGGCGTGCTTAGCTAG....................................................................................................................	25	1	2.00	2	0	1	0	0	1
...........................................................................................................................AGCTGCCTTGTGAAGTGCTTAA.........................................................................	22	1	2.00	2	0	2	0	0	0
......................................................................................................................TTGCTAGCTGCCTTGTGAAGTGCTT...........................................................................	25	1	2.00	2	0	0	0	2	0
..............................................................................................................................................TACGTGTAATTGTTGAACAACAA-AA----..............................................	25	1	2.00	2	1	0	0	0	1
.........................................................................TGAGTCTTTCACTGGGCGTGCTT..........................................................................................................................	23	1	2.00	2	0	2	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGTGCT............................................................................	19	1	2.00	2	0	2	0	0	0
...........................................................................AGTCTTTCACTGGGCGTGCTTAGCTAG....................................................................................................................	27	1	2.00	2	0	0	0	2	0
...........................................................................AGTCTTTCACTGGGCGTGC............................................................................................................................	19	1	2.00	2	0	0	0	2	0
........................................................................................................ATTTATTTACCATATTGC................................................................................................	18	1	1.00	1	0	1	0	0	0
...........................................................................AGTCTTTCACTGGGCGTGCTTTT........................................................................................................................	23	1	1.00	1	0	1	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGTGCTTG..........................................................................	23	1	1.00	1	0	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTATT........................................................................	24	1	1.00	1	0	0	0	0	1
...........................................................................AGTCTTTCACTGGGCGTGCTTAGCC......................................................................................................................	25	1	1.00	1	0	0	0	0	1
............................................................................GTCTTTCACTGGGCGTGCTTAGCT......................................................................................................................	24	1	1.00	1	0	1	0	0	0
...........................................................................AGTCTTTCACTGGGCGTGCTTAT........................................................................................................................	23	1	1.00	1	0	0	0	1	0
.........................................................................................................TTTATTTACCATATTGCTAGCTG..........................................................................................	23	1	1.00	1	1	0	0	0	0
.....................................................................................................................ATTGCTAGCTGCCTTGTGAAGTGCT............................................................................	25	1	1.00	1	0	0	0	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTAAT........................................................................	24	1	1.00	1	0	0	0	1	0
.......................................................................................................................TGCTAGCTGCCTTGTGAAG................................................................................	19	1	1.00	1	0	0	0	0	1
..........................................................................................................................TAGCTGCCTTGTGAAGTGCTTATA........................................................................	24	1	1.00	1	0	0	1	0	0
.........................................................................TGAGTCTTTCACTGGGCGTGCT...........................................................................................................................	22	1	1.00	1	0	0	0	1	0
...........................................................................AGTCTTTCACTGGGCGTGCTTAGT.......................................................................................................................	24	1	1.00	1	0	0	0	1	0
...........................................................................................................................AGCTGCCTTGTGAAGTGCTTAT.........................................................................	22	2	1.00	2	0	2	0	0	0
.............................................................................TCTTTCACTGGGCGTGCTTAGA.......................................................................................................................	22	1	1.00	1	0	0	1	0	0
..............................................................................CTTTCACTGGGCGTGCTTAGCT......................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............................................................................CTTTCACTGGGCGTGCTTAGCTA.....................................................................................................................	23	1	1.00	1	0	1	0	0	0
.....................................................................................................................ATTGCTAGCTGCCTTGTGAAGTGCTT...........................................................................	26	1	1.00	1	0	0	1	0	0
...........................................................................AGTCTTTCACTGGGCGTGCTTAA........................................................................................................................	23	1	1.00	1	0	1	0	0	0
...............................................................................TTTCACTGGGCGTGCTTAGC.......................................................................................................................	20	1	1.00	1	0	0	0	1	0
............................................................................................................................GCTGCCTTGTGAAGTGCTTT..........................................................................	20	1	1.00	1	0	1	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGTGCC............................................................................	20	1	1.00	1	0	0	0	0	1
.............................................................................TCTTTCACTGGGCGTGCTTT.........................................................................................................................	20	1	1.00	1	0	1	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGTGCTTC..........................................................................	21	1	1.00	1	0	1	0	0	0
.......................................................................................................................TGCTAGCTGCCTTGTGAAGTG..............................................................................	21	1	1.00	1	0	0	0	0	1

droVir3

AAAT---------------------------------------------------GTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCT-TTT-AAT-ACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGT---------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	29096.00	29096	14	28	916	43	312	1257	833	1212	494	925	1048	0	0	0	1023	1080	486	1217	1033	714	367	1307	2296	718	70	74	222	223	139	449	63	413	0	943	0	7	6	1	328	1415	0	0	0	0	0	0	0	0	2	2	4	1	2	1	0	2	0	0	8	450	3453	3433	0	0	8	0	0	0	7	11	9	7	9	11	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	15065.00	15065	2	6	192	1	75	227	193	22	6	27	13	0	0	0	1425	1613	324	803	1226	1030	123	1402	2470	233	65	95	228	249	241	665	100	674	0	232	2	5	3	4	77	456	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	277	173	0	14	74	0	0	0	0	0	0	0	1	2	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	1272.00	1272	0	0	27	0	6	20	19	2	1	6	4	0	0	0	78	102	40	127	79	73	13	111	217	25	4	12	25	19	13	52	12	66	0	26	0	1	0	0	9	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	13	10	0	6	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	578.00	578	0	0	16	0	5	7	1	0	0	0	0	0	0	0	48	58	9	47	41	39	1	46	93	14	3	6	11	9	18	29	6	34	0	2	0	0	0	0	2	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	4	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	515.00	515	1	2	41	2	14	25	14	10	9	12	13	0	0	0	15	22	16	41	24	11	10	19	55	29	0	1	6	4	6	15	0	5	0	30	0	0	0	0	15	44	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	416.00	416	0	0	29	0	1	3	3	0	0	1	0	0	0	0	23	49	10	34	29	27	0	37	69	4	2	3	8	8	3	13	3	18	0	4	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	8	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTC..........................................................................	22	1	172.00	172	1	0	6	0	2	5	0	0	0	2	0	0	0	0	7	4	1	4	14	7	4	21	8	2	0	0	0	0	1	8	0	10	0	8	0	0	0	0	1	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	131.00	131	0	0	1	0	0	2	2	0	0	0	0	0	0	0	7	10	7	21	10	9	2	8	26	3	1	0	0	1	1	1	3	3	0	3	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	91.00	91	0	0	80	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	90.00	90	0	0	1	0	0	2	1	5	3	2	3	0	0	0	5	6	2	2	3	2	1	4	4	2	0	0	1	1	0	3	0	3	0	2	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	10	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	82.00	82	2	1	6	0	0	2	2	0	1	3	2	0	0	0	7	12	2	4	3	1	1	4	6	6	0	0	0	1	0	0	0	0	0	4	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA........................................................................	24	1	74.00	74	0	0	1	0	0	0	0	0	0	0	0	0	0	0	9	4	2	10	7	5	0	4	13	0	0	0	2	1	3	1	1	3	1	2	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTCCCTCATTTGGCAGGTTTAGC.......................................................................................................................	24	1	72.00	72	2	0	15	8	0	0	0	0	0	0	0	0	0	0	3	2	1	6	1	0	0	1	7	0	0	0	1	1	4	3	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	1	4	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	58.00	58	0	1	1	0	0	0	1	0	1	2	1	0	0	0	2	3	2	4	2	1	2	4	3	1	1	2	1	3	0	1	0	0	0	6	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	56.00	56	0	0	6	1	0	1	0	3	0	0	1	0	0	0	1	4	3	1	1	6	0	5	5	1	1	0	2	1	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT........................................................................	24	1	52.00	52	0	0	1	0	1	0	0	0	0	0	0	0	0	0	6	1	1	8	1	5	0	5	8	0	0	1	1	2	4	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	46.00	46	0	0	0	0	0	5	2	2	0	0	4	0	0	0	3	5	1	3	3	0	1	0	1	2	0	0	0	0	0	0	0	0	0	6	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	43.00	43	4	0	0	2	0	4	2	2	0	0	1	0	0	0	0	3	0	0	2	0	3	1	2	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTCCCTCATTTGGCAGGTTTAG........................................................................................................................	23	1	34.00	34	0	0	5	0	1	1	0	0	0	0	0	0	0	0	1	2	0	5	0	0	1	0	5	0	0	0	1	1	1	0	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	27.00	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	1	3	2	0	4	6	0	1	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	22.00	22	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	1	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	22.00	22	0	0	1	0	0	1	0	0	0	0	0	0	0	0	2	2	1	0	0	2	0	3	6	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	21.00	21	0	0	0	0	0	2	0	2	0	0	1	0	0	0	0	6	0	0	1	0	2	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.........................................................................	23	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	2	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT........................................................................	24	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	1	2	0	1	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................TGCCTTGTGAAGGGCTTA..........................................................................	18	1	11.00	11	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	1	2	0	1	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CTGCCTTGTGAAGGGCTT...........................................................................	18	1	11.00	11	0	0	3	0	0	3	0	0	0	1	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATC........................................................................	24	1	11.00	11	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	10.00	10	0	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.......................................................................	25	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.........................................................................	23	1	8.00	8	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATCC.......................................................................	25	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTACC........................................................................	24	1	7.00	7	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTCCCTCATTTGGCAGGTTTAGCC......................................................................................................................	25	1	7.00	7	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTA..........................................................................	20	1	6.00	6	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT........................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTCCCTCATTTGGCAGGTTTA.........................................................................................................................	22	1	6.00	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTCT.........................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	2	5.00	10	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTATA........................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCC............................................................................	20	1	5.00	5	1	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................AGTCCCTCATTTGGCAGGTTT..........................................................................................................................	21	1	4.00	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGA.............................................................................	19	1	4.00	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTGT........................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CTGCCTTGTGAAGGGCTTA..........................................................................	19	1	3.00	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTT..........................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGG...............................................................................	17	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.........................................................................	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTC..........................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGT.............................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAA........................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTCA.........................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCT............................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTAT..........................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTCC..........................................................................	22	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GCTGCCTTGTGAAGGGCTTAAAA.......................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droGri2

TATTTAAT-----------------------TC-TG---ATTAT-------------GAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCT-TTTCAAT-TTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTG-AG----GAA---AAATA-----------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTT...........................................................................	21	1	1923.00	1923	167	1756
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTA..........................................................................	22	1	202.00	202	89	113
..........................................................................................................................TAGCTGCCTTGTGAAGGGCT............................................................................	20	1	27.00	27	25	2
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTT..........................................................................	22	1	18.00	18	11	7
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.........................................................................	23	1	16.00	16	13	3
...........................................................................................................................AGCTGCCTTGTGAAGGGCTT...........................................................................	20	1	11.00	11	10	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.........................................................................	23	1	9.00	9	4	5
...........................................................................AGTCCCTCATTTGGCGGACTTAGC.......................................................................................................................	24	1	6.00	6	6	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGC.............................................................................	19	1	5.00	5	5	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTA..........................................................................	21	1	4.00	4	4	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.........................................................................	23	1	4.00	4	0	4
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.........................................................................	23	1	3.00	3	0	3
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTT...........................................................................	22	1	3.00	3	1	2
..........................................................................................................................TAGCTGCCTTGTGAAGGG..............................................................................	18	1	2.00	2	2	0
...........................................................................................................................AGCTGCCTTGTGAAGGGC.............................................................................	18	1	2.00	2	2	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTT..........................................................................	21	1	2.00	2	2	0
...........................................................................AGTCCCTCATTTGGCGGACTTAGGC......................................................................................................................	25	1	1.00	1	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTG...........................................................................	21	1	1.00	1	0	1
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTA...........................................................................	21	1	1.00	1	0	1
...........................................................................AGTCCCTCATTTGGCGGACTTAG........................................................................................................................	23	1	1.00	1	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.........................................................................	23	1	1.00	1	1	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.........................................................................	22	1	1.00	1	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTC...........................................................................	21	1	1.00	1	0	1
...........................................................................AGTCCCTCATTTGGCGGAC............................................................................................................................	19	1	1.00	1	1	0
............................................................................................................................GCTGCCTTGTGAAGGGCTT...........................................................................	19	1	1.00	1	1	0
.......................................................................................................................................AAGGGCTTACGTGTGATTGT...............................................................	20	1	1.00	1	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTCG.........................................................................	23	1	1.00	1	1	0
...........................................................................................................................AGCTGCCTTGTGAAGGGCT............................................................................	19	1	1.00	1	1	0
.........................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA..........................................................................	23	1	1.00	1	1	0
..........................................................................................................................TAGCTGCCTTGTGAAGGGCTTG..........................................................................	22	1	1.00	1	1	0

der_10

scaffold_4644:121668-121734 -

Known Ortholog

Canonical miRNA

3pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-28.4	-27.9	-27.9