ID:

der-mir-iab-4

 Coordinate:

scaffold_4770:8952417-8952484 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.1 -35.0 -34.6

Flybase annnotation

utr3 [utr3_plus_6122]; utr5 [utr5_plus_10994]; pre_miRNA [Dere\mir-iab-4-RM]; Antisense to utr3 [utr3_minus_7917]; miRNA [Dere\miR-iab-4-3p-RB]; miRNA [Dere\miR-iab-4-5p-RA]

No Repeatable elements found

Sense Strand Reads

GACGACGTATAATTTTCAGCACTTTTGGATTAAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTGAAACACTTTTTAAGACTCTACAATA

*****************************************(((((...(((((..((((((((((((.((((((.((..........)).)).)))).))))))))))))...)))))...)))))...************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 M057

embryo

 V040

embryo

 V107

male body		 V108

head
........................................................ACGTATACTGAATGTATCCTGA.......................................................................................... 22 0 1 1839.00 1839 1431 324 77 5 2
........................................................ACGTATACTGAATGTATCCTG........................................................................................... 21 0 1 645.00 645 618 15 8 3 1
.........................................................CGTATACTGAATGTATCCTGA.......................................................................................... 21 0 1 144.00 144 135 8 1 0 0
.........................................................CGTATACTGAATGTATCCTG........................................................................................... 20 0 1 56.00 56 56 0 0 0 0
........................................................ACGTATACTGAATGTATCC............................................................................................. 19 0 1 34.00 34 2 31 0 1 0
........................................................ACGTATACTGAATGTATCCT............................................................................................ 20 0 1 31.00 31 23 4 2 1 1
........................................................ACGTATACTGAATGTATCCTTA.......................................................................................... 22 1 1 17.00 17 10 0 7 0 0
......................................................AAACGTATACTGAATGTATCCT............................................................................................ 22 0 1 15.00 15 2 11 2 0 0
........................................................ACTTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 13.00 13 12 0 1 0 0
........................................................AGGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 12.00 12 2 10 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACA..................................................... 22 0 1 10.00 10 3 5 2 0 0
........................................................ACGTATACTAAATGTATCCTGA.......................................................................................... 22 1 1 9.00 9 8 1 0 0 0
........................................................ACGTATACTGAATGTATACTGA.......................................................................................... 22 1 1 8.00 8 8 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAA......................................................................................... 23 1 1 8.00 8 8 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACAC.................................................... 23 0 1 8.00 8 0 8 0 0 0
........................................................ACGTATACTGAATGTATCCTT........................................................................................... 21 1 1 8.00 8 7 0 1 0 0
........................................................ACGTATACTGAATGTATCCTGT.......................................................................................... 22 1 1 8.00 8 5 3 0 0 0
..........................................................GTATACTGAATGTATCCTGA.......................................................................................... 20 0 1 8.00 8 8 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAAC...................................................... 21 0 1 8.00 8 0 8 0 0 0
........................................................ACGTATCCTGAATGTATCCTGA.......................................................................................... 22 1 1 7.00 7 7 0 0 0 0
........................................................ACGTATACTGCATGTATCCTGA.......................................................................................... 22 1 1 7.00 7 4 1 2 0 0
........................................................ACGCATACTGAATGTATCCTGA.......................................................................................... 22 1 1 6.00 6 4 1 1 0 0
........................................................ACGGATACTGAATGTATCCTGA.......................................................................................... 22 1 1 6.00 6 1 4 1 0 0
........................................................ACCTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 6.00 6 0 6 0 0 0
..........................................................................................CGGTATACCTTCAGTATACG.......................................................... 20 0 1 5.00 5 5 0 0 0 0
........................................................ACTTATACTGAATGTATCCTG........................................................................................... 21 1 1 5.00 5 5 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAT......................................................................................... 23 1 1 5.00 5 4 1 0 0 0
........................................................ACGTATACTGAATGGATCCTGA.......................................................................................... 22 1 1 4.00 4 2 1 1 0 0
........................................................ACGTATACTGATTGTATCCTGA.......................................................................................... 22 1 1 4.00 4 4 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGG.......................................................................................... 22 1 1 4.00 4 3 0 1 0 0
........................................................ACGAATACTGAATGTATCCTGA.......................................................................................... 22 1 1 4.00 4 3 1 0 0 0
........................................................ACGTATCCTGAATGTATCCTG........................................................................................... 21 1 1 4.00 4 4 0 0 0 0
........................................................ACGTATACTGAATGTATTCTGA.......................................................................................... 22 1 1 4.00 4 3 0 1 0 0
..........................................................................................CGGTATACCTTCAGTATACGTA........................................................ 22 0 1 4.00 4 4 0 0 0 0
........................................................TCGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 3.00 3 2 1 0 0 0
........................................................ACGTATACTGAATGCATCCTG........................................................................................... 21 1 1 3.00 3 3 0 0 0 0
........................................................ACGTATACTGAATGTATCCTAA.......................................................................................... 22 1 1 3.00 3 3 0 0 0 0
..........................................................GTATACTGAATGTATCCTG........................................................................................... 19 0 1 3.00 3 3 0 0 0 0
........................................................ACGTATACTGAATTTATCCTGA.......................................................................................... 22 1 1 3.00 3 3 0 0 0 0
........................................................ACGTATACTGAATGTGTCCTGA.......................................................................................... 22 1 1 3.00 3 2 0 1 0 0
..........................................................................................CGGTATACCTTCAGTATACGTAAC...................................................... 24 0 1 2.00 2 0 2 0 0 0
........................................................ATGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0
........................................................AGCTATACTGAATGTATCCTGA.......................................................................................... 22 2 1 2.00 2 0 2 0 0 0
........................................................ACGTATACTGAATGTATCCGGA.......................................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................ACGAATACTGAATGTATCCTG........................................................................................... 21 1 1 2.00 2 2 0 0 0 0
.........................................................CGTATACTGAACGTATCCTGA.......................................................................................... 21 1 1 2.00 2 2 0 0 0 0
........................................................ACGTATACTGAGTGTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 0 0 0 1
.........................................................CGTATACTGAATGTATCCT............................................................................................ 19 0 1 2.00 2 2 0 0 0 0
........................................................ACGTATGCTGAATGTATCCTGA.......................................................................................... 22 1 1 2.00 2 2 0 0 0 0
............................................................ATACTGAATGTATCCTGA.......................................................................................... 18 0 1 2.00 2 1 1 0 0 0
...........................................................TATACTGAATGTATCCTGA.......................................................................................... 19 0 1 2.00 2 2 0 0 0 0
........................................................ACGTATACTTAATGTATCCTG........................................................................................... 21 1 1 2.00 2 2 0 0 0 0
........................................................ACGTATACTGAATGTAGCCTGA.......................................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................ACGTATACTGAATGTATCCCGA.......................................................................................... 22 1 1 2.00 2 0 1 1 0 0
......................................................AAACGTATACTGAATGTATCC............................................................................................. 21 0 1 2.00 2 0 2 0 0 0
........................................................ACGTATACTGAATGTATC.............................................................................................. 18 0 1 2.00 2 0 2 0 0 0
........................................................ACGTATACTGAATGTTTCCTG........................................................................................... 21 1 1 2.00 2 2 0 0 0 0
........................................................ACGTATACTGAATCTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 0 1 0 0
........................................................ACGAATACTGAATGTATACTGA.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0
..............................................................................................ATACCTTCAGTATACGTAACAC.................................................... 22 0 1 2.00 2 0 2 0 0 0
........................................................ACGTATACTGTATGTATCCTG........................................................................................... 21 1 1 2.00 2 2 0 0 0 0
...........................................................................................GGTATACCTTCAGTATACG.......................................................... 19 0 1 2.00 2 2 0 0 0 0
.......................................................TACGTATACTGAATGTATCCTG........................................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................ACGTATACTAAATGTATCCTG........................................................................................... 21 1 1 2.00 2 2 0 0 0 0
.............................................................................................CATACCTTCAGTATACGTAAC...................................................... 21 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTCAATGTATCCTT........................................................................................... 21 2 1 1.00 1 0 0 1 0 0
........................................................ACGGATACTGAATGTATCCTCA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
......................................................AAACGTATACTGAATGTATCCTC........................................................................................... 23 1 1 1.00 1 0 0 1 0 0
........................................................TCGTATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAC......................................................................................... 23 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGCATCCCGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTGAATGTATTTTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
........................................................ACGCATACTGAATGGATCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
........................................................ACCTATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0
........................................................AGGTATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACAGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAG......................................................................................... 23 0 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGACT........................................................................................ 24 1 1 1.00 1 1 0 0 0 0
...........................................................TATACTGAATGTATCCTG........................................................................................... 18 0 1 1.00 1 1 0 0 0 0
...........................................................TATACTGAATGTATCCTGAAA........................................................................................ 21 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGCATGTATCTTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
......................................................AAAAGGATACTGAATGTATCCTC........................................................................................... 23 3 1 1.00 1 0 0 1 0 0
.........................................................CGTATACTGAATGTATCATGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................CTCATACTGAATGTATCCTGAT......................................................................................... 22 3 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGCATGTATCCTTA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
.............................................................................................TATGCGTTCAGTATACGTAACA..................................................... 22 2 1 1.00 1 0 1 0 0 0
........................................................ACGTATCCTGACTGTATCCTGC.......................................................................................... 22 3 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTGAATGTATCCGG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGACA........................................................................................ 23 2 1 1.00 1 0 1 0 0 0
...........................................................TATACTGAATGTATCCTCA.......................................................................................... 19 1 1 1.00 1 1 0 0 0 0
........................................................ACGTAGACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGAATGCATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTGAATGTATCTTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0
.........................................................CGTATACTCAATGTATCCTG........................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.........................................................CGCATACTGAATGTATCCTGAA......................................................................................... 22 2 1 1.00 1 0 1 0 0 0
.........................................................CGTCTACTGAATTTATCCTG........................................................................................... 20 2 1 1.00 1 1 0 0 0 0
...............................................................................................TACCTTCAGTATACGTAACT..................................................... 20 1 1 1.00 1 1 0 0 0 0
........................................................ACTTATACTTAATGTATCCTGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
........................................................ACGAATAGTGAATGTATCCTGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
.....................................................TAAACGTATACTGAATGTATCC............................................................................................. 22 0 1 1.00 1 0 1 0 0 0
........................................................AAGTATACTGAATGTATTCTGAA......................................................................................... 23 3 1 1.00 1 0 0 1 0 0
......................................................AAACGTATACTGCATGTATCCT............................................................................................ 22 1 1 1.00 1 0 1 0 0 0
........................................................ACGTAAACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 1 0 0
........................................................ACTTATACTGAATGTATCCT............................................................................................ 20 1 1 1.00 1 1 0 0 0 0
......................................................AGACGTATACTGAATGTATCCC............................................................................................ 22 2 1 1.00 1 0 1 0 0 0
........................................................ACGTGTACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGCATGTATCCTCA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
.........................................................CGTATACTGAATGTATCATG........................................................................................... 20 1 1 1.00 1 1 0 0 0 0
........................................................AAGTATACTGAATGCATCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 1 0
........................................................ACGTATACTGAATGTAACCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGATTGTATCCTGAA......................................................................................... 23 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGATT........................................................................................ 24 1 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTGTATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0
.........................................................CTTATACTGAATGTATCCTGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACTTATCCTGAATGTATCCTGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAAGGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACATATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................CGTCTACTGAATGTATCCTGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................AAACGTATACTGAATGTATCCC............................................................................................ 22 1 1 1.00 1 0 1 0 0 0
.............................................................................................TATTCCTTCAGTATACGTAACT..................................................... 22 2 1 1.00 1 0 1 0 0 0
........................................................AGGTATACTGAATGTATCCC............................................................................................ 20 2 1 1.00 1 0 1 0 0 0
........................................................AGGTATACTGAATGTATCCT............................................................................................ 20 1 1 1.00 1 0 1 0 0 0
........................................................ATGTATACTGAATGTATCC............................................................................................. 19 1 1 1.00 1 0 1 0 0 0
......................................................AAACGTATACTGAATGTATCCTGA.......................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................CGTATACTGAATTTATCCTGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGAATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................TATACCTTCATTATACGTAACAC.................................................... 23 1 1 1.00 1 0 1 0 0 0
.............................................................................................TATACGTTCAGTATACGTAACT..................................................... 22 2 1 1.00 1 0 1 0 0 0
..........................................................................................CGGTATACCTTCAGTATA............................................................ 18 0 1 1.00 1 0 0 0 1 0
.........................................................CGTATACTGAATGTATCCTGAG......................................................................................... 22 0 1 1.00 1 1 0 0 0 0
........................................................ACGTCTACTGAACGAATCCTGA.......................................................................................... 22 3 1 1.00 1 0 0 1 0 0
..........................................................................................CGGAATACCTTCAGTATACGTA........................................................ 22 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTTTCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..........................................................GTATACTGAATGTATCCTGAA......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.......................................................GACGTATACTGAATGTATCCTGA.......................................................................................... 23 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGGATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
................................................................................................ACCTTCAGTATACGTAACA..................................................... 19 0 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGCATGTATCC............................................................................................. 19 1 1 1.00 1 0 1 0 0 0
........................................................ACGGATACTGAATGTATCC............................................................................................. 19 1 1 1.00 1 0 1 0 0 0
........................................................CCGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATAATGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
....................................................CAACACGTATACTGAATGTATCCTG........................................................................................... 25 3 1 1.00 1 1 0 0 0 0
...............................................................................................TACCTTCAGTATACGTAAC...................................................... 19 0 1 1.00 1 0 1 0 0 0
..............................................................................................ATACCTTCAGTATACGTAAC...................................................... 20 0 1 1.00 1 1 0 0 0 0
........................................................ACATATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGT.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................TGTACCTTCAGTATACGTAAC...................................................... 21 1 1 1.00 1 0 1 0 0 0
.............................................................................................TATACCTTCAGTATACGTGACAC.................................................... 23 1 1 1.00 1 0 1 0 0 0
.........................................................CGTATACTGAATGTATCCTTA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTCTACTGCATGTATCCTGG.......................................................................................... 22 3 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTGAATGTATCCTGAGTA....................................................................................... 25 1 1 1.00 1 1 0 0 0 0
........................................................ATATATACTGAATGTATCCTG........................................................................................... 21 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATCTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................CGTATACTGAATGTATCC............................................................................................. 18 0 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGAATGTATACTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGCATGTATACTGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTTAT......................................................................................... 23 2 1 1.00 1 1 0 0 0 0
........................................................AAGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0
...........................................................TATACTTAATGTATCCTGACT........................................................................................ 21 2 1 1.00 1 0 0 1 0 0
........................................................ACGCATACTGAATGTATCCTGC.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
..........................................................................................CGCTATACCTTCAGTATACGTAAC...................................................... 24 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACCGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTTAATGTATCCTTA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
.....................................................GTAACGTATACTGAATGTATCCTG........................................................................................... 24 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTGTCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGC.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................CGTACACTGAATGTATCCTGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..........................................................................................CTGTATACCTTCAGTATACGTAAC...................................................... 24 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGAATGGATCCGGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGT......................................................... 21 0 1 1.00 1 0 0 1 0 0
..........................................................GTATACTGAATGTATCCTGATA........................................................................................ 22 2 1 1.00 1 1 0 0 0 0
........................................................ACGAATACTGAATGTATCCT............................................................................................ 20 1 1 1.00 1 1 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAA......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................ACGTAGACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACT..................................................... 22 1 1 1.00 1 0 1 0 0 0
.........................................................CGTATACTGAATGTATCCTGAT......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATCCTGAAGGTATCCTG........................................................................................... 21 2 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTAAATGTATCCTCA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
........................................................ACGTATAGTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0
.........................................................................................CCGGTATACCTTCAGTATACGTAAC...................................................... 25 0 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGAATGTATCCC............................................................................................ 20 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGAATGTATCCTC........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGGATACTGAATTTATCCTGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
......................................................TGACGTATACTGAATGTATCC............................................................................................. 21 2 1 1.00 1 0 1 0 0 0
........................................................ACGAATACTGAATGTATCCTAA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0
........................................................ATGTATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................CGGATACTGAATGTATCCTGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................CGTATACTGAATCTATCCTGA.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................ACGTATACTGAATTTATCCTTA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
..........................................................................................CTGTATACCTTCAGTATACGTAACC..................................................... 25 2 1 1.00 1 0 1 0 0 0
........................................................ACGTATACTGAATGAATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................ACCTATACTGAATGTATCATGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0
........................................................ACGTATACTGATTGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................TATACCTTCAGCATACGTAACAC.................................................... 23 1 1 1.00 1 0 1 0 0 0
........................................................ACGTATACAGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................GGTGTGAAAGACTTTTTAA............ 19 2 4 0.75 3 0 0 1 0 2
........................................................GCTTATACTGAATGTATCCTTA.......................................................................................... 22 3 2 0.50 1 0 0 1 0 0
........................................................GCGTATACTGAATGCATCCTTA.......................................................................................... 22 3 2 0.50 1 0 0 1 0 0
.........................................................................................................................................GATGTGAAACACTTTTTT............. 18 1 2 0.50 1 0 0 1 0 0
........................................................ACGAATACTGAAGGTATACTGA.......................................................................................... 22 3 2 0.50 1 1 0 0 0 0
........................................................ACGCATACTGAATGTACCCCGA.......................................................................................... 22 3 2 0.50 1 0 0 1 0 0
........................................................ACGTATACTGAATGTATCTG............................................................................................ 20 2 2 0.50 1 1 0 0 0 0
........................................................ACTTATCCTGAATGTATACTG........................................................................................... 21 3 4 0.25 1 1 0 0 0 0
.........................................................ACGATACTGAATGTATCCTGA.......................................................................................... 21 3 4 0.25 1 1 0 0 0 0

Anti-sense strand reads

CTGCTGCATATTAAAAGTCGTGAAAACCTAATTCCGCTAAGACACGCTGGAGCATTTGCATATGACTTACATAGGACTCACATAGGATAGGCCATATGGAAGTCATATGCATTGTGCTCTTTCGTGCTCGTTGCACCCTACACTTTGTGAAAAATTCTGAGATGTTAT

**************************************(((((...(((((..((((((((((((.((((((.((..........)).)).)))).))))))))))))...)))))...)))))...***************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 V107

male body		 M057

embryo

 V108

head

 V040

embryo

 V060

head

 GSM1528801

follicle cells
..............................................................................................TATGGAAGTCATATGCATT....................................................... 19 0 1 533.00 533 69 375 0 81 4 4 0
...........................................................................................CCATATGGAAGTCATATGCATT....................................................... 22 0 1 264.00 264 155 8 77 14 9 1 0
............................................................................................CATATGGAAGTCATATGCATT....................................................... 21 0 1 143.00 143 96 8 26 8 3 2 0
.............................................................................................ATATGGAAGTCATATGCATT....................................................... 20 0 1 105.00 105 55 12 7 14 17 0 0
.........................................................................................GGCCATATGGAAGTCATATGCATT....................................................... 24 0 1 99.00 99 83 6 5 0 1 0 4
..........................................................................................GCCATATGGAAGTCATATGCATT....................................................... 23 0 1 34.00 34 28 3 2 0 0 1 0
.........................................................................................TGCCATATGGAAGTCATATGCATT....................................................... 24 1 1 17.00 17 6 10 1 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCAGT....................................................... 22 1 1 14.00 14 0 0 13 0 1 0 0
...........................................................................................CCATATGGAAGTCATATGCAT........................................................ 21 0 1 13.00 13 12 0 1 0 0 0 0
............................................................................................CATATGGAAGTCATATGCAT........................................................ 20 0 1 13.00 13 12 1 0 0 0 0 0
...............................................................................................ATGGAAGTCATATGCATT....................................................... 18 0 1 9.00 9 1 0 0 8 0 0 0
.........................................................................................GGCCATATGGAAGTCATATGCAT........................................................ 23 0 1 8.00 8 8 0 0 0 0 0 0
........................................................................................TGGCCATATGGAAGTCATATGCATT....................................................... 25 1 1 7.00 7 3 4 0 0 0 0 0
........................................................................................AGGCCATATGGAAGTCATATGCATT....................................................... 25 0 1 7.00 7 3 2 1 0 1 0 0
...........................................................................................CCATAGGGAAGTCATATGCATT....................................................... 22 1 1 6.00 6 5 0 1 0 0 0 0
.................................................................................................................GTGCTCTTTCGTGCTCGTT.................................... 19 0 1 6.00 6 0 3 1 2 0 0 0
..........................................................................................GCCATATGGAAGTCATATGCAT........................................................ 22 0 1 5.00 5 5 0 0 0 0 0 0
......................................................TTTGCATATGACTTACATAGGA............................................................................................ 22 0 1 5.00 5 1 2 0 0 1 1 0
...........................................................................................CCATATGGAAGTCATATGTATT....................................................... 22 1 1 4.00 4 0 0 4 0 0 0 0
............................................................................................CATAGGGAAGTCATATGCATT....................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
............................................................................................CATATGGAAGTCATATGAATT....................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
.............................................................................................ATATGGAAGTCATATGCAT........................................................ 19 0 1 3.00 3 3 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGAATT....................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0
.............................................................................................ATAGGGAAGTCATATGCATT....................................................... 20 1 1 3.00 3 1 0 1 1 0 0 0
............................................................................................CATATGTAAGTCATATGCATT....................................................... 21 1 1 2.00 2 1 0 0 0 1 0 0
...........................................................................................CCATATGGAAGTCATCTGCATT....................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................GTGCTCTTTCGTGCTCGTTGCA................................. 22 0 1 2.00 2 0 0 0 2 0 0 0
...........................................................................................CCATATGGAAGTCATATGTAGT....................................................... 22 2 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................TATGGAAGTCATATGCATTGT..................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................CCATATGGAAGTCCTATGCATT....................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................ATTTGCATATGACTTACATAGGA............................................................................................ 23 0 1 2.00 2 1 0 0 0 1 0 0
..............................................................................................TATGGAAGTCATATGCAGT....................................................... 19 1 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................CCATAAGGAAGTCATATGCATT....................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0
..............................................................................................TACGGAAGTCATATGCATT....................................................... 19 1 1 2.00 2 0 1 0 0 0 1 0
.............................................................................................ATATTGAAGTCATATGCATT....................................................... 20 1 1 2.00 2 1 0 0 0 1 0 0
.........................................................................................GGCCACATGGAAGTCATATGCATT....................................................... 24 1 1 2.00 2 1 1 0 0 0 0 0
.........................................................................................TCCCATATGGAAGTCATATGCATT....................................................... 24 2 1 2.00 2 1 0 0 0 1 0 0
.....................................................ATTTGCATATGACTTACATAGG............................................................................................. 22 0 1 2.00 2 1 0 1 0 0 0 0
..............................................................................................TAAGGAAGTCATATGCATT....................................................... 19 1 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................AGCCATATGGAAGTCATATGCATT....................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................TATGGAAGTCATATGCAT........................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................TATGGAAGTCCTATGCATT....................................................... 19 1 1 2.00 2 1 0 0 1 0 0 0
.........................................................................................GGCCATAGGGAAGTCATATGCATT....................................................... 24 1 1 2.00 2 1 0 0 0 1 0 0
...........................................................................................CCATATGGAAGTCATATGCATTG...................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCCTATGGAAGTCATATGCATT....................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0
............................................................................................CGTATGGAAGTCATATGCATT....................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
.............................................................................................ATACGGAAGTCATATGCATT....................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0
...........................................................................................CCATATGGAAGTCATAGGCAGT....................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................ATATGGAAGTCATATGAATT....................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
.............................................................................................ATATGGAAGTCATATGGATT....................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
................................................................ACTTACATAGGACTCACATAGGAT................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................CCATACGGAAGTAATATGCATT....................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0
...........................................................................................CCATATGGAAGTCGTATGCATT....................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................ATATGTAAGCCATATGCATT....................................................... 20 2 1 1.00 1 0 0 0 0 1 0 0
........................................................................................AGGCCATATGGAAGTCATATGCAT........................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
...................................GCTAAGAGACGCTGGAGCAA................................................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................TATGGAAGTCATATTCATT....................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................GGCAATATGGAAGTCATATGCATT....................................................... 24 1 1 1.00 1 0 0 0 0 0 0 1
...........................................................................................CCGTATGGAAGTCATATGCATT....................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................TGCCATATGGAAGTCATATGCATTG...................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................TATGGAAGTCATCTGCATT....................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................AGAAGGAAGTCATATGCATT....................................................... 20 2 1 1.00 1 0 0 0 0 1 0 0
............................................................................................CATATGGAAGTCATATGC.......................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................TTGCATATGACTTACATAGG............................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
....................................................AATTTGCATATGACTTACATAGGA............................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................GCGCTCTTTCGTGCTCGTT.................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATACGCAT........................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................GCTATATGGAAGTCATATGCATT....................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................CATATTGAAGTCATATGCATT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................TGGCCATATGGAAGTCATATGCAT........................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................CATATGGAAGTCATATGCAGT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................TCCATATGGAAGTCATATCCATT....................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATTT...................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................CATACGGAAGTCATATGCATT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................TATGGAAGTCATAGGCATT....................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTCATATGCATC....................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATTCTAG................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
............................................................................................CATATGGAAGTCCTATGCATT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTCATATGCATTT...................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................ATATGTAAGTCATATGCATT....................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATTCT..................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................CCATACGGAAGTCATATGCAT........................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................GGCCATATGTAAGTCATATGCATT....................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATTCATT....................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................TATGGAAGTCATATGTATT....................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................CTATGGAAGTCATATGCATT....................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................CCATCTGGAAGTCATATGCATT....................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................GGCCATACGGAAGTCATATGCATT....................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCATATGGAGGTCATATGCATT....................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
.........................................................................................GGCCATATGGAAGTCATATGCATA....................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATG....................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
...........................................................................................CCATATGGAATTCATATGCAT........................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................TATGGAAGTAATATGCATT....................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................TAAGGAAGTCATATGCAT........................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................ATATGGAAGTCATATGCATTG...................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TGTGCTCTTTCGTGCTCGTT.................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATAGGCATT....................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................ATATGGAAGTCATATGTATT....................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................GTGCTCTTTCGTGCTCGTTG................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
............................................................................................AATAGGGAAGTCATATGCAT........................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................AATGGAAGTCATATGCATT....................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................TATGGAAGTCATATGCTTT....................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTCATATGAATT....................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................CATATGGAAGTCATATGTATT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................CCATATGGAAGTCATAAGCATT....................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
......................................................TTTGCATATGACTTACATAGG............................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................AAGGCCATATGGAAGTCATATGCATT....................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TTATGGAAGTCATATGCATT....................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................CCATATGGAAATCATATGCATT....................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................CGCCATATGGAAGTCATATGCATT....................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATTA...................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATTC...................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CAATATGGAAGGCATATGAATT....................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0
..............................................................................................TATGGAAGTTATATGCATT....................................................... 19 1 2 0.50 1 0 1 0 0 0 0 0
.........................................................................................AGTCATATGGAAGTCATAAGCA......................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0
............................................................................................CATATGCAACTCATATGCATT....................................................... 21 2 4 0.25 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4770:8952367-8952534 - der-mir-iab-4 Known_mirbase GACG---------------------ACG--TATAATT----TTC-AGCACTTT----------------TGGATT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG--AAACACTTTTTAAG-------AC-TCTA-----CAATA
droYak3 3R:11708918-11709085 - dya-mir-iab-4 Known_mirbase GACG---------------------ACG--CGTAATT----TTC-AGCACTTT----------------TGGACT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG--AAACACTTTTTAAT-------AC-TGCT-----TAATA
droSec2 scaffold_12:1472195-1472362 - dse-mir-iab-4 Known_mirbase GACA---------------------CGG--CATAATT----TTC-AGCACTTT----------------TGGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG--AAACACTTTTTAAT-------AC-ATCT-----TAATA
droSim2 3r:8574066-8574232 - dsi-mir-iab-4 Known_mirbase GACA---------------------CGG--CATAATT----TTC-AGCACTTT----------------TGGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG--AAACACTTTT-AAT-------AC-ACTT-----TAATA
dm3 chr3R:12681947-12682114 + dme-mir-iab-4 Known_mirbase GACG---------------------ACG--CATAATT----TTC-AGCACTTT----------------TGAATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG--AAACACTTTTTAAG-------AC-ACCT-----TAATA
droEug1 scf7180000409804:92878-93034 + A-----------------------------CTTCATT----TTG-GTCACTTT----------------CGGATT--ATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG--AAACAGTTTA----CTTTAA--------------AAAC
droBia1 scf7180000299102:622743-622905 + AGCG---------------------GCG--CATCTTT----CTC-GGCACTTT----------------TGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTA----TTTTTG--------------AAAA
droTak1 scf7180000411269:86541-86712 + AGCG---------------------GCG--CATCCTT---CTTT-GGCACTTT----------------TGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG--AAACACTTTT----CTTTTTAAA-ACTC-----GACGA
droEle1 scf7180000486474:1729418-1729566 + ------------------------------------------TC-GTCACTTT----------------CGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTA----CTTTAAAA-------------ATA
droRho1 scf7180000759657:23955-24125 + AGCG---------------------ACG--CATCCTG----TTT-GGCACTTT----------------CGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTA----CTGTTAAAACTGTT-----GAAT-
droFic1 scf7180000452523:122324-122488 + AGCG---------------------ACA--CGTC--T----TTCAGTCACTTTCGC-------------CGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTT----C-----------CT-----TAAAA
droKik1 scf7180000302313:151139-151307 + TTTT---------------------TCG--TGTCCTT---TATA-AGCACTTG----------------CGGATG--ATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG--AAACACTTGAAAAA-------AA-TATA-----TGACA
droAna3 scaffold_13340:7215150-7215314 - dan-mir-iab-4 Known_mirbase T----------------------------------------TGC-AGCACTAG---------AACATTACGGAGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG--AAA-ACTTAA---TATTCTGAAA-TATT-----TAAAA
droBip1 scf7180000396708:1638835-1639002 + ACT----------------------ACT---ATC-TT----ACC-AGAAAATT---------------ACGATGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG--AAA-ACTTTG----TTTTAGAAA-TATT-----TCAAA
dp5 2:17671714-17671885 + dps-mir-iab-4 Known_mirbase GACT---------------------GCACTCGTAATTTTCTTTC-AGCGGTTA----------------TGT-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACGTCGAAC--TGAAA-----------C-CGAGCACTGTGATT
droPer2 scaffold_0:11526520-11526692 + dpe-mir-iab-4 Known_mirbase GACT---------------------GCATTCGTAATTTTCTTTC-AGCGGTTA----------------TGT-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGTCGAACTGAATTTAAA-------CG-TGTA-----AACCG
droWil2 scf2_1100000004943:4905561-4905707 - dwi-mir-iab-4 Known_mirbase CACC---------------------GGG--TACC---------G-GTCACTTT----------------CC-------AGATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGTGAAACACTTTTT--------------------------A
droVir3 scaffold_12855:414655-414826 - dvi-mir-iab-4 Known_mirbase GATGAAAACTGAGGTGTTTATAGCGG-------------------AGCACTTA----------------T--------TGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG--TGATATATTTAGA---------T-TG--CATTAAAATA
droMoj3 scaffold_6540:1943706-1943836 + dmo-mir-iab-4 Known_mirbase TAC---------------------------------------------ACTTTT--CAGGAG-------CGAAT----TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTG----------------------------------------
droGri2 scaffold_14906:12815081-12815211 + dgr-mir-iab-4 Known_mirbase GACA---------------------CTC--CAAA---------G-GACACTCT----------------TG---------TAGAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTG----------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GACG---------------------ACG--TATAATT----TTC-AGCACTTT----------------TGGATT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG--AAACACTTTTTAAG-------AC-TCTA-----CAATASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................2211839.0018391431324077520
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211645.006456181508310
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................211144.00144135801000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20156.005656000000
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................19134.003423100100
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20131.003123402110
....................................................................................................AAACGTATACTGAATGTATCCT...........................................................................................................22115.001521102000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................22110.00103502000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................2318.0088000000
...........................................................................................................................................TATACCTTCAGTATACGTAACAC...................................................................2318.0080800000
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2118.0087001000
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2218.0085300000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2018.0088000000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2118.0080800000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2015.0055000000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................2315.0054100000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2214.0043001000
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2214.0044000000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1913.0033000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................2412.0020200000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1912.0022000000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1812.0021100000
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1912.0022000000
....................................................................................................AAACGTATACTGAATGTATCC............................................................................................................2112.0020200000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................1812.0020200000
............................................................................................................................................ATACCTTCAGTATACGTAACAC...................................................................2212.0020200000
.........................................................................................................................................GGTATACCTTCAGTATACG.........................................................................1912.0022000000
....................................................................................................AAACGTATACTGAATGTATCCTC..........................................................................................................2311.0010001000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................2311.0011000000
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.0011000000
.........................................................................................................TATACTGAATGTATCCTG..........................................................................................................1811.0011000000
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................2111.0011000000
.......................................................................................................CGTATACTGAATGTATCCTGACA.......................................................................................................2311.0010100000
.............................................................................................................................................TACCTTCAGTATACGTAACT....................................................................2011.0011000000
...................................................................................................TAAACGTATACTGAATGTATCC............................................................................................................2211.0010100000
....................................................................................................AAACGTATACTGAATGTATCCC...........................................................................................................2211.0010100000
....................................................................................................AAACGTATACTGAATGTATCCTGA.........................................................................................................2411.0011000000
........................................................................................................................................CGGTATACCTTCAGTATA...........................................................................1811.0010000100
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2211.0011000000
........................................................................................................GTATACTGAATGTATCCTGAA........................................................................................................2111.0011000000
..............................................................................................................................................ACCTTCAGTATACGTAACA....................................................................1911.0010100000
.............................................................................................................................................TACCTTCAGTATACGTAAC.....................................................................1911.0010100000
............................................................................................................................................ATACCTTCAGTATACGTAAC.....................................................................2011.0011000000
.......................................................................................................CGTATACTGAATGTATCCTGT.........................................................................................................2111.0011000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTA......................................................................................................2511.0011000000
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1811.0010100000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................2211.0011000000
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2111.0010001000
........................................................................................................GTATACTGAATGTATCCTGATA.......................................................................................................2211.0011000000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................2211.0011000000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2211.0010100000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2211.0011000000
.......................................................................................................................................CCGGTATACCTTCAGTATACGTAAC.....................................................................2511.0010100000
......................................................................................................ACGTATACTGAATGTATCCC...........................................................................................................2011.0010100000
......................................................................................................ACGTATACTGAATGTATCCTC..........................................................................................................2111.0011000000
.......................................................................................................................................................................................GATGTG--AAACACTTTTTT..........................1820.5010001000
......................................................................................................ACGTATACTGAATGTATCTG...........................................................................................................2020.5011000000
droYak3
GACG---------------------ACG--CGTAATT----TTC-AGCACTTT----------------TGGACT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG--AAACACTTTTTAAT-------AC-TGCT-----TAATASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................2214354.0043542282392113000030160
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................191496.004960249300000010
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211412.004120287108130101020
....................................................................................................AAACGTATACTGAATGTATCCT...........................................................................................................22195.0095009410000000
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21179.00790443410000000
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20175.007502238200020110
...........................................................................................................................................TATACCTTCAGTATACGTAACAC...................................................................23165.0065006500000000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................18147.0047004510000010
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................21135.0035003410000000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................23135.0035023300000000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20129.0029027110000000
....................................................................................................AAACGTATACTGAATGTATCCC...........................................................................................................22128.0028002800000000
....................................................................................................AAACGTATACTGAATGTATCC............................................................................................................21122.0022002200000000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................22121.0021002100000000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................23118.0018001620000000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................22117.0017001160000000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................22115.0015001410000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................24114.0014001400000000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................22113.0013001200000010
...........................................................................................................................................TATACCTTCAGTATACGTAACC....................................................................22111.0011001100000000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................23110.001001810000000
......................................................................................................ACGTATACTGAATGTATCCC...........................................................................................................20110.0010001000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................2219.00903510000000
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................2218.00800800000000
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2218.00800610000010
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2118.00802420000000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2016.00603300000000
......................................................................................................ACGTATACTGAATGTA...............................................................................................................1616.00600000000060
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2016.00604200000000
.......................................................................................................CGTATACTGAATGTATCCTGACC.......................................................................................................2315.00500500000000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2215.00521200000000
......................................................................................................ACGTATACTGAATGT................................................................................................................1513.00300000000030
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2213.00302100000000
....................................................................................................AAACGTATACTGAATGTATCCTG..........................................................................................................2313.00300300000000
......................................................................................................ACGTATACTGAATGTATCCTGAGT.......................................................................................................2413.00300210000000
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2112.00201100000000
.....................................................................................................AACGTATACTGAATGTATCCTG..........................................................................................................2212.00200200000000
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1812.00200200000000
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1912.00201100000000
...........................................................................................................................................TATACCTTCAGTATACGTAACACT..................................................................2412.00200200000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAACT....................................................................2512.00200200000000
......................................................................................................ACGTATACTGAATGTATCCTA..........................................................................................................2112.00200200000000
.......................................................................................................CGTATACTGAATGTATCCTGATA.......................................................................................................2311.00100100000000
.........................................................................................................TATACTGAATGTATCCTGAA........................................................................................................2011.00100100000000
...................................................................................................TAAACGTATACTGAATGTATCC............................................................................................................2211.00100100000000
......................................................................................................ACGTATACTGAATGTATCCTGAAA.......................................................................................................2411.00100100000000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1911.00101000000000
....................................................................................................AAACGTATACTGAATGTATC.............................................................................................................2011.00100100000000
.....................................................................................................AACGTATACTGAATGTATCCT...........................................................................................................2111.00100100000000
........................................................................................................GTATACTGAATGTATCCTGAG........................................................................................................2111.00101000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTGTATC..................................................................................................2911.00100100000000
......................................................................................................ACGTATACTGAATGTATCCTC..........................................................................................................2111.00100100000000
......................................................................................................ACGTATACTGAATGTATCT............................................................................................................1911.00100100000000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1811.00100100000000
............................................................................................................................................ATACCTTCAGTATACGTAACAC...................................................................2211.00100100000000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1911.00101000000000
.......................................................................................................CGTATACTGAATGTATCCTGACA.......................................................................................................2311.00101000000000
..........................................................................................................ATACTGAATGTATCCTGAGTGTATCCT................................................................................................2711.00100100000000
......................................................................................................ACGTATACTGAATGTATCCTGAGGCC.....................................................................................................2611.00100100000000
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.00100100000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAC......................................................................2311.00100100000000
.......................................................................................................CGTATACTGAATGTATCCTGTT........................................................................................................2211.00100100000000
.........................................................................................................TATACTGAATGTATCCTG..........................................................................................................1811.00101000000000
...........................................................................................................TACTGAATGTATCCTGAT........................................................................................................1811.00100100000000
........................................................................................................GTATACTGAATGTATCCTGATC.......................................................................................................2211.00100100000000
.......................................................................................................CGTATACTGAATGTATCCTGAGA.......................................................................................................2311.00100100000000
....................................................................................................AAACGTATACTGAATGTATCCTGA.........................................................................................................2411.00100100000000
droSec2
GACA---------------------CGG--CATAATT----TTC-AGCACTTT----------------TGGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG--AAACACTTTTTAAT-------AC-ATCT-----TAATASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................221859.0085937834771
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211247.002472231230
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21157.005752050
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20123.002316160
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20122.002222000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................2319.0093060
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2219.0093060
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2218.0087010
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................1916.0063030
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2115.0050050
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2015.0054010
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2214.0043010
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2114.0043010
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................2214.0041120
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2113.0033000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................1813.0030030
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2213.0033000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................2412.0021010
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2012.0021010
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1912.0022000
....................................................................................................AAACGTATACTGAATGTATCCT...........................................................................................................2212.0020020
......................................................................................................ACGTATACTGAATGTATCCTC..........................................................................................................2112.0022000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................2311.0011000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1911.0011000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2211.0011000
......................................................................................................ACGTATACTGAATGTATCCTGAAG.......................................................................................................2411.0010010
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................2311.0011000
.....................................................................................................AACGTATACTGAATGTATCCTG..........................................................................................................2211.0011000
........................................................................................GTGCGACCTCGTAAACGTA..........................................................................................................................1911.0010010
.......................................................................................................CGTATACTGAATGTATCCTGAGT.......................................................................................................2311.0010010
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................2211.0011000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................2211.0011000
....................................................................................................AAACGTATACTGAATGTATCCTGT.........................................................................................................2411.0010010
.......................................................................................................................................................................AGCACGAGCAACGTGGGATGTG--......................................2211.0010010
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.0010010
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................2311.0011000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1811.0010010
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2211.0010010
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1911.0010010
.........................................................................................................................................GGTATACCTTCAGTATACGTA.......................................................................2111.0011000
............................................................................................................................................ATACCTTCAGTATACGTAACA....................................................................2111.0010010
.......................................................................................................CGTATACTGAATGTATCCTGG.........................................................................................................2111.0011000
droSim2
GACA---------------------CGG--CATAATT----TTC-AGCACTTT----------------TGGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG--AAACACTTTT-AAT-------AC-ACTT-----TAATASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................2213761.00376161987114013710338248221303341304386203
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211467.0046731823675227112736102405002
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................221205.002053319900000000000000
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................191137.0013703690392500100000000
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20195.0095126123108513156401000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................23132.0032011900001330022010
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................18132.0032011604500006000000
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................22126.0026000051001101314000
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21120.0020000100000370000000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................22113.001300500000330200000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................22112.001200000000270300000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................22112.001200400000420002000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20111.001101180000010000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................24111.001100403200100100000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2117.00700410000100100000
..............................................................................................................TGAATGTATCCTGAGTA......................................................................................................1736.6720000000911000000000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2016.00600013100000001000
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................2316.00600000000121101000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................2316.00600310010010000000
............................................................................................................ACTGAATGTATCCTGA.........................................................................................................1615.00500000000113000000
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2115.00500000000005000000
....................................................................................................AAACGTATACTGAATGTATCCT...........................................................................................................2215.00500110000010200000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................2214.00400000000130000000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1814.00400000000004000000
..............................................................................................................TGAATGTATCCTGAGT.......................................................................................................1633.331000000055000000000
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2313.00300002100000000000
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2213.00300000000011100000
......................................................................................................ACGTATACTGAATGT................................................................................................................1513.00300000000003000000
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................2213.00300110000000100000
....................................................................................................AAACGTATACTGAATGTATCCTG..........................................................................................................2313.00300300000000000000
........................................................................................................................................CGGTATACCTTCAGTATAC..........................................................................1913.00300111000000000000
........................................................................................................................................CGGTATACCTTCAGTATA...........................................................................1813.00300001200000000000
............................................................................................................................................ATACCTTCAGTATACGT........................................................................1712.00200000000002000000
......................................................................................................ACGTATACTGAATGTATCCTGAAC.......................................................................................................2412.00200200000000000000
.....................................................................................................AACGTATACTGAATGTATCCTG..........................................................................................................2212.00200200000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2212.00200000000110000000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2012.00200010000000100000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1912.00200002000000000000
.........................................................................................................................................GGTATACCTTCAGTATACG.........................................................................1912.00200002000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAAA.......................................................................................................2312.00200200000000000000
......................................................................................................ACGTATACTGAATGTATCCGA..........................................................................................................2112.00200000000020000000
......................................................................................................ACGTATACTGAATGTATCCTGAAA.......................................................................................................2412.00200200000000000000
...............................................................................................................GAATGTATCCTGAGT.......................................................................................................1531.67500000023000000000
..............................................................................................................TGAATGTATCCTGAG........................................................................................................1531.67500000032000000000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................2311.00100000000010000000
............................................................................................................................................ATACCTTCAGTATACGTAA......................................................................1911.00100000000001000000
........................................................................................................................................CGGTATACCTTCAGT..............................................................................1511.00100000000010000000
.........................................................................................................TATACTGAATGTATCCTG..........................................................................................................1811.00100000000001000000
.........................................................................................................................................GGTATACCTTCAGTATACGTA.......................................................................2111.00100010000000000000
......................................................................................................ACGTATACTGAATGTA...............................................................................................................1611.00100000000001000000
......................................................................................................ACGTATACTGAATGTATCCTGAGGCG.....................................................................................................2611.00100000000001000000
............................................................................................................................................ATACCTTCAGTATACGTAACA....................................................................2111.00100000000100000000
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................2111.00100000000000100000
......................................................................................................ACGTATACTGAATGTATCCTGACA.......................................................................................................2411.00100100000000000000
.........................................................................................................TATACTGAATGTATCCTGATA.......................................................................................................2111.00100000000010000000
.............................................................................................................................................TACCTTCAGTATACGTA.......................................................................1711.00100000000001000000
......................................................................................................ACGTATACTGAATGTATCT............................................................................................................1911.00100000000000001000
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1811.00100000100000000000
......................................................................................................ACGTATACTGAATGTATCCTA..........................................................................................................2111.00100000000100000000
.......................................................................................................CGTATACTGAATGTATCCTGGT........................................................................................................2211.00100000001000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGT.......................................................................................................2411.00100010000000000000
.......................................................................................................CGTATACTGAATGTATCCTGG.........................................................................................................2111.00100100000000000000
................................................................................................................AATGTATCCTGAGTA......................................................................................................15100.90900000036000000000
............................................................................................................ACTGAATGTATCCTG..........................................................................................................1520.50100000000001000000
.........................................................................................................TATACTGAATGTATCCTGAAAA......................................................................................................2220.50100000000010000000
...............................................................................................................GAATGTATCCTGAGTA......................................................................................................1640.50200000002000000000
......................................................................................................ACGTATACTGAATGTATTGA...........................................................................................................2090.11100000000000001000
...............................................................................................................GAATGTATCCTGAGTAC.....................................................................................................17120.08100000001000000000
dm3
GACG---------------------ACG--CATAATT----TTC-AGCACTTT----------------TGAATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG--AAACACTTTTTAAG-------AC-ACCT-----TAATASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................22115921.0015921000031232933724200000001205000000000010010014171702206153000096210512000000000000000000020012121919322773330910147331105116553611086746623448101027119859727142020003000010000000000000110018204774036410630040000000000002326016001143161240490000003621100004007000003200000000091339292722542091681114091241001110047521602000009003000001000000000000000540120153130000000001401943600524020000002020000000000000223000000011
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................231928.0092800000000000000000000000000000000000000000000000000000000441420570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000020000000000000200000000000000000000000000000000000003000000000000100000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211707.0070700000000231000000000010100000000006100002002210101201000292660000000000000000000000151789010010900301389525020000000263030200000000000100000000004110000001240003000000000004208006172204022000004200200000200000000000000000410211312376221120000000019260000000200600000000000000000000002121122100000000081811002000200000101000000000001000002000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................231701.00701000000156000100000000000000000000000000001000000000000001120000000000000000000000018814116138330035221160113214160300013117514115000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000100110001000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................221578.0057800000023500000000000000000000000000000000000000000000000300000000000000000000000012914441121000103170215189449164300201018415031000000000000000000000001001000000010000000000000000200001140100000000010000000000000000000000000000000008300107000000001100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................241456.004560000000520000000000000000000000000000000000000000000000020000000000000000000000031263345105900014000000211221100200101421015000000000000000000000000101000000000000000000000000000000100000000000000100000000000000000000000000000004150002000000001100000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................201209.002090000000000000000000000000000000000700000001011000011000020000000000000000000000002018140003010010110212000000000030000100000000000000000000000030001010600000000000000010000011000008000000100000001000000000000000000031013108301314000000004400000009006000000000000000000000070126120000000001501002200100000000000000000000010100000000
.........................................................................................................................................GGTATACCTTCAGTATACGTAA......................................................................221154.0015400000004100000000000000000000000000000000000000000000000000000000000000000000000077733960000000000000160000000000910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................211126.00126000000000100000000000000000000000000000000000000000000003600000000000000000000000124846100011000011100300000000001340000000000000000000000000001400000000000000000000000000000000000000000001000000000000000000000000000101000020001000000007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................231107.00107000000010000000000000000000000000000000000000000000000000000000000000000000000000071826000001000001000200000000006005000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000003310112200003000000001100000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................221103.00103000000000000000000000000000000000000000000001000000000000000000000000000000000000125192210030010101001001100000000000000000000000000001000000001000001000000000000000000010100000002010000000000000000000000000000000000230000140000000000002200000000001000000000000000000000011004000000000001200000100000000000000000000000000100000000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................23199.0099000000000000000000000001000000000000000000000000000000000000000000000000000000000608110000020000010022000000000001000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000004100321802140000100032000000000000000000000000000000000000000000000000011000023000000000000000000000000000000000015
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................21185.0085000000000000000000000000000000000000001100100000000100006220000000000000000000000504710030900300200020000034000100000000000000000100000000000000000002000000000000000000000001000000000000010000010000000000000000000010000580000000000002200000000000000000000000000000000010001000000000000000000000001000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGTAAC.....................................................................23175.00750000000200000000000000000000000000000000000000000000000000000000000000000000000002214141250000000000010000000000000100300000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................22155.00550000000010000000000000000000000000000000001000000100000000000000000000000000000003053500000100000000000000000000000000100000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATAC..........................................................................19148.00480000000000000000000000000000000000000000000000000000000010000000000000000000000001099000000000010102400000000003000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................22142.0042000000001000000000000000000000000000000000000000000000000000000000000000000000000520500000000000010000000000000900000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000110000011001000000005100000000000000000000000000000000000000000000000002100002100000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................22141.0041000000000000000000000000000000000000000000000000000000000000000000000000000000000003500000000100001051000000101120000000000000000000000000010100000001000000000000000000020001100005000000001000000000000000000000000000000040100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................22135.00350000000112100000000000000000000000000000000000000000000000000000000000000000000004021200000000000000010000000000500000000000000000000000000000000000000000000000000000100100000000020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................20132.0032000000000000000000000001000000000000000000000000000000001000000000000000000000000105100001100000000210100000000000000000000000001001000000000000020003000000000000000010000000000000000000000000000000000000000000000000000071000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGATC.......................................................................................................24131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGTA.......................................................................21129.002900000000000000000000000000000000000000000000000000000000000000000000000000000000011001200000000000000000000000000200000000000000000000000000000000000002000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................22127.00270000000000000000000000000000000000000000000000000000000091710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................22123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000003900000100000000000000000000400000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AACGTATACTGAATGTATCCTGA.........................................................................................................23123.0023000000001000000000000000000000000000000000000000000000000100000000000000000000000109900000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................20121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000105800000000000010000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAAA.......................................................................................................23119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000017000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAACT....................................................................25118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000160100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................19117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000006010000000000010100000000000000000000000000000000200000000000000000000000000000000010000000000000000000000000000000000000000000000011001100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................18115.0015000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000100000010000000000000000000000000000000000000000020000000000000001003000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAAA.......................................................................................................24114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACAC...................................................................23113.0013000000000100000000000000000000000000000000000000000000000000000000000000000000000230000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001120000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAA.....................................................................24112.0012000000001000000000000000000000000000000000000000000000000000000000000000000000000201300000100000002000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................23111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000002200001000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAACA....................................................................25111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000700200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GTATACCTTCAGTATACGTAAC.....................................................................22110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000200600000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000330000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1918.008000000000000000000000000000000000000000000000000000000000000000000000000000000000101200000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1818.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTG......................................................................................................2517.007000000000000000000000000000000000000000000000000000000001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................2017.007000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000010000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100010001000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AAACGTATACTGAATGTATCCT...........................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000010000000000000000000000000000000000000000000000020000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAC......................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGT.......................................................................................................2416.006000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................TACCTTCAGTATACGTAAC.....................................................................1916.006000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGTAAA.....................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTTC.........................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAT.....................................................................2415.005000000010000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTA.......................................................................1914.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AAACGTATACTGAATGTATCCTGA.........................................................................................................2414.004000000010000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTGT.....................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2214.004000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTTT.........................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGT........................................................................2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAT......................................................................2313.003000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGTAACA....................................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTC.......................................................................2213.003000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGATA.......................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TACCTTCAGTATACGTAA......................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTAG.........................................................................................................2212.002000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTA..........................................................................................................2112.002000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGCA........................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTATACTGAATGTATCCTGAAC.......................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAAC.......................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
A-----------------------------CTTCATT----TTG-GTCACTTT----------------CGGATT--ATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG--AAACAGTTTA----CTTTAA--------------AAACSizeHit CountTotal NormTotal
No Reads
droBia1
AGCG---------------------GCG--CATCTTT----CTC-GGCACTTT----------------TGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTA----TTTTTG--------------AAAASizeHit CountTotal NormTotal
No Reads
droTak1
AGCG---------------------GCG--CATCCTT---CTTT-GGCACTTT----------------TGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG--AAACACTTTT----CTTTTTAAA-ACTC-----GACGASizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------TC-GTCACTTT----------------CGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTA----CTTTAAAA-------------ATASizeHit CountTotal NormTotal
No Reads
droRho1
AGCG---------------------ACG--CATCCTG----TTT-GGCACTTT----------------CGGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTA----CTGTTAAAACTGTT-----GAAT-SizeHit CountTotal NormTotal
No Reads
droFic1
AGCG---------------------ACA--CGTC--T----TTCAGTCACTTTCGC-------------CGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG--AAACACTTTT----C-----------CT-----TAAAASizeHit CountTotal NormTotal
No Reads
droKik1
TTTT---------------------TCG--TGTCCTT---TATA-AGCACTTG----------------CGGATG--ATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG--AAACACTTGAAAAA-------AA-TATA-----TGACASizeHit CountTotal NormTotal
No Reads
droAna3
T----------------------------------------TGC-AGCACTAG---------AACATTACGGAGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG--AAA-ACTTAA---TATTCTGAAA-TATT-----TAAAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................221744.007446369114210
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211507.0050749933002
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21164.00646310000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20148.00484800000
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20135.00352851001
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................19132.00323290000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................21112.00120120000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2219.009090000
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2217.007600100
...........................................................................................................................................TATACCTTCAGTATACGTAACC....................................................................2215.005050000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................2215.005041000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................1815.005050000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................2314.004310000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................2314.004400000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1914.004400000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................2413.003030000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2213.003300000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1913.003300000
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2212.002101000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................2212.002110000
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................2211.001010000
......................................................................................................ACGTATACTGAATGTATCCTGAGG.......................................................................................................2411.001100000
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1811.001010000
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1911.001100000
......................................................................................................ACGTATACTGAATGTATCCC...........................................................................................................2011.001010000
......................................................................................................ACGTATACTGAATGTATCCTA..........................................................................................................2111.001100000
.......................................................................................................CGTATACTGAATGTATCCTGAGT.......................................................................................................2311.001100000
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2211.001010000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................2311.001010000
......................................................................................................ACGTATACTGAATGTATCCTGAGT.......................................................................................................2411.001100000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1811.001100000
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.001100000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2211.001100000
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2111.001010000
........................................................................................................................................CGGTATACCTTCAGTATACGTAACT....................................................................2511.001010000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2011.001100000
........................................................................................................GTATACTGAATGTATCCTGATG.......................................................................................................2211.001100000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................2211.001010000
......................................................................................................ACGTATACTGAATGTATCCTGACA.......................................................................................................2411.001100000
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................2130.331100000
droBip1
ACT----------------------ACT---ATC-TT----ACC-AGAAAATT---------------ACGATGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG--AAA-ACTTTG----TTTTAGAAA-TATT-----TCAAASizeHit CountTotal NormTotal
No Reads
dp5
GACT---------------------GCACTCGTAATTTTCTTTC-AGCGGTTA----------------TGT-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACGTCGAAC--TGAAA-----------C-CGAGCACTGTGATTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................2212365.002365193167532505029199272
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211718.0071816503701411158
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21190.009008150300010
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................19189.008901861100000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20160.006006000000000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................21136.003603311100000
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20133.003302140800000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................24131.003102271100000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................22121.002105110500000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................22119.001904150000000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................23118.00180130100481
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................22115.00150700500030
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................18112.001200100200000
...........................................................................................................................................TATACCTTCAGTATACGTAACC....................................................................2219.0090180000000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1919.0090900000000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................2318.0080110100230
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2217.0070110500000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2216.0060120300000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2015.0050400100000
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................2215.0050230000000
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2114.0040210001000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2014.0040400000000
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2214.0040400000000
............................................................................................................................................ATACCTTCAGTATACGTAAC.....................................................................2013.0030120000000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................2213.0030100200000
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................2213.0030210000000
.........................................................................................................TATACTGAATGTATCCTG..........................................................................................................1812.0020100000001
........................................................................................................................................CGGTATACCTTCAGTATACGTAACT....................................................................2512.0020020000000
......................................................................................................ACGTATACTGAATGTATCCC...........................................................................................................2012.0020020000000
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1912.0020100100000
...........................................................................................................................................TATACCTTCAGTATACGTAACAC...................................................................2312.0020020000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................2312.0020000100010
.........................................................................................................................................GGTATACCTTCAGTATAC..........................................................................1812.0020200000000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1912.0020200000000
........................................................................................................GTATACTGAATGTATCCTGAC........................................................................................................2112.0020020000000
........................................................................................................................................CGGTATACCTTCAGTATAC..........................................................................1911.0010100000000
............................................................................................................................................ATACCTTCAGTATACGTAACA....................................................................2111.0010100000000
......................................................................................................ACGTATACTGAATGTATCCTGTT........................................................................................................2311.0010100000000
......................................................................................................ACGTATACTGAATGTATCCG...........................................................................................................2011.0010010000000
.......................................................................................................CGTATACTGAATGTATCCC...........................................................................................................1911.0010010000000
........................................................................................................GTATACTGAATGTATCCTGAA........................................................................................................2111.0010010000000
.....................................................................................................TACGTATACTGAATGTATCCTG..........................................................................................................2211.0010100000000
...........................................................................................................................................TATACCTTCAGTATACGTAAGC....................................................................2211.0010010000000
.............................................................................................................................................TACCTTCAGTATACGTAACACGA.................................................................2311.0010010000000
.......................................................................................................CGTATACTGAATGTATCCTGAGA.......................................................................................................2311.0010100000000
...........................................................................................................................................TATACCTTCAGTATACGTAA......................................................................2011.0010100000000
.........................................................................................................................................GGTATACCTTCAGTATACGTAAC.....................................................................2311.0010100000000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................2311.0010010000000
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1811.0010010000000
......................................................................................................ACGTATACTGAATGTATCCTGACA.......................................................................................................2411.0010000000001
......................................................................................................ACGTATACTGAATGTATCCTGGT........................................................................................................2311.0010100000000
........................................................................................................GTATACTGAATGTATCCTGAAC.......................................................................................................2211.0010000000001
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.0010100000000
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2211.0010100000000
.......................................................................................................CGTATACTGAATGTATCCTGACC.......................................................................................................2311.0010010000000
.......................................................................................................CGTATACTGAATGTATCCTGATA.......................................................................................................2311.0010010000000
........................................................................................................................................CGGTATACCTTCAGTATACGC........................................................................2111.0010001000000
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................2130.6720010000010
......................................................................................................ACGTATACTGAATGTATCCTAT.........................................................................................................2220.5010010000000
droPer2
GACT---------------------GCATTCGTAATTTTCTTTC-AGCGGTTA----------------TGT-----AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGTCGAACTGAATTTAAA-------CG-TGTA-----AACCGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................221266.002669112846010
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211115.0011518915100
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21110.0010280000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2219.009810000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................2018.008080000
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................1916.006501000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2215.005500000
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................2015.005032000
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2213.003210000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................1812.002110000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2112.002020000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................2312.002101000
.......................................................................................................CGTATACTGAATGTATCCTGG.........................................................................................................2112.002200000
........................................................................................................GTATACTGAATGTATCCTGAT........................................................................................................2111.001010000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2011.001010000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1811.001010000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................2211.001010000
.....................................................................................................TACGTATACTGAATGTATCCTG..........................................................................................................2211.001100000
........................................................................................................GTATACTGAATGTATCCTT..........................................................................................................1911.001010000
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2211.001010000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2211.001010000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2011.001010000
............................................................................................................................................ATACCTTCAGTATACGTAAC.....................................................................2011.001001000
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.001010000
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................2211.001010000
droWil2
CACC---------------------GGG--TACC---------G-GTCACTTT----------------CC-------AGATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGTGAAACACTTTTT--------------------------ASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................221693.00693135803331
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211361.0036123120470
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21142.0042036150
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................20135.00350200141
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20126.0026026000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................22118.0018030150
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2219.00904050
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................2116.00600060
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2014.00412010
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2213.00302010
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2313.00301020
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2213.00300030
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2213.00303000
.....................................................................................................TACGTATACTGAATGTATCCT...........................................................................................................2112.00200020
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................2212.00201010
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1912.00202000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2112.00200020
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2012.00201010
......................................................................................................ACGTATACTGAATGTATCCTGAGT.......................................................................................................2412.00201010
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................2312.00200020
.........................................................................................................TATACTGAATGTATCCTGAGTG......................................................................................................2212.00200020
......................................................................................................ACGTATACTGAATGTATCCTGAGTGT.....................................................................................................2612.00200020
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................1912.00201010
........................................................................................................GTATACTGAATGTATCCTGATA.......................................................................................................2211.00101000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................2311.00101000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2211.00101000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................1811.00100010
...................................................................................................TATACGTATACTGAATGTATCC............................................................................................................2211.00100010
............................................................................................................................................ATACCTTCAGTATACGTAAC.....................................................................2011.00101000
.........................................................................................................TATACTGAATGTATCCTG..........................................................................................................1811.00101000
......................................................................................................ACGTATACTGAATGTATCCTGAGTG......................................................................................................2511.00100010
.....................................................................................................TACGTATACTGAATGTATC.............................................................................................................1911.00100010
......................................................................................................ACGTATACTGAATGTATCCTC..........................................................................................................2111.00100010
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2111.00100010
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................2111.00101000
..............................................................................AGATGAATCTGTGCAACTTCGT.................................................................................................................................2211.00100010
...........................................................................................................................................TATACCTTCAGTATACGTAA......................................................................2011.00100010
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1811.00101000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................2411.00101000
droVir3
GATGAAAACTGAGGTGTTTATAGCGG-------------------AGCACTTA----------------T--------TGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG--TGATATATTTAGA---------T-TG--CATTAAAATASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................2211928.00192811342127026311010003115817920153043115503613663367950411831500063810614132824131393734318000709716412949107341116151662
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211816.008165140314020010000016124161374822195966126165406110104000002021021070001610001200172014010710011
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................201165.00165003320000000000792890188023149572501100041000000000000000000010000400015011200000
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................22186.0086008200100000000002100030003330531900001002000000000000010010000000000000000100000
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21176.007600388000000000000022000101010811400011001000000000010000000000000000000000201011
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................19174.007420543000000000000020200000000000100000000000000001042020100400000000010103000000
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20154.005400470000000000000000200100000111000000000000000000000000000000000000001000000000
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................22133.00331034000000000000000000100001100000100000000100003103110000200000100002000113010
......................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATC.............................................................................................34124.00240000000000000000000000000000000000000000000332303033000100300000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................21124.00240040000000000001101003600100301000000010000000000000000000000000100000001000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................24122.00220017000000000000020100000000000000152000000100001010000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................20122.002200210000000000000010000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................23121.00210015000000000000000000000111101100000000000000000010001000200004000000100000000
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................23118.00180001000000000000000000000010100000000000000000110001011000000010200010202200000
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................21115.00150003000000000000000000000000000000000000000000000001002000100000000102011300000
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................18113.00131112000000000000010100001100000100000000000000000000000000100001000010000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................22112.00120050000000000000000000000000000000100000000001000000010100100000200000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................22110.00100014000000000000000000000000100000000000000000000002010000100000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................2218.0080013000000000000000000000000000000000000000000000100000000000000300000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAACT....................................................................2517.0070001000000000000010000000000000000000000000000001000011000200000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACC....................................................................2217.0070005000000000000000000000000000100000000000000000000000000000001000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGTC........................................................................................................2316.0060000000000000000000000000000010301000001000000000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................2116.0060014000000000000000000000001000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2116.0060030000000000000020001000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATCC............................................................................................3516.0060000000000000000000000000000000000000000000121000000010000100000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................2216.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTC..........................................................................................................2115.0050010000000000000000000000000300100000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................2215.0050001000000000000000000000000000000001000000000000010001000000000000010000000000
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2014.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................2214.0043000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000100000000010101000000
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1914.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................2314.0040000000000000010000000000010000000000000000000000000001000000001000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGATCT......................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000030000000000
.......................................................................................................CGTATACTGAATGTATCCTGATA.......................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000300000
.......................................................................................................CGTATACTGAATGTATCCTGAAA.......................................................................................................2313.0030000000000000000000000000000100000000000000000000010000000000000000000100000000
.......................................................................................................CGTATACTGAATGTATCCTGACA.......................................................................................................2313.0030002000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGACC.......................................................................................................2413.0030001000000000000000000000000100000000000000000000000000000100000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAA......................................................................2013.0030000000000000000000000000000000200000001000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGATC.......................................................................................................2413.0030000000000000000000000000000100100000000000000000000000010000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGATC.......................................................................................................2313.0030001000000000000000000000010010000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCT................................................................................................3113.0030000000000000000000000000000000000000000000000100002000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGTAAC.....................................................................2312.0020011000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAAC.......................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000020000000000
......................................................................................................ACGTATACTGAATGTATCCTGAAA.......................................................................................................2412.0020010000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATCT............................................................................................3511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................TATACCTTCAGTATACGTAACG....................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TACCTTCAGTATACGTAAC.....................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ACTGAATGTATCCTGA.........................................................................................................1611.0010000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................CGTATACTGAATGTATC.............................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................GTATACTGAATGTATCCTGAAA.......................................................................................................2211.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGTA.......................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGTT........................................................................................................2311.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2211.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................ATACCTTCAGTATACGTAAC.....................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAT......................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GGTATACCTTCAGTATACGT........................................................................2011.0010000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGAGC.......................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATT.............................................................................................3411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACT.........................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTT.......................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTGATA.......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001
........................................................................................................GTATACTGAATGTATCCTGAAC.......................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATAC..........................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACGTATACTGAATGTATCCTA..........................................................................................................2111.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGATAA......................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CGGTATACCTTCAGTATACGTAACC....................................................................2511.0010000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................TCCGGTATACCTTCAGTATACGTAAC.....................................................................2611.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGTATACTGAATGTATCCTGT.........................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................TATACTGAATGTATCC............................................................................................................1611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................TATACTGAATGTATCCTGAA........................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TATACTGAATGTATCCTGAAAA......................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000100000000000000001000
.........................................................................................................TATACTGAATGTATCCTGTT........................................................................................................2020.5010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TAC---------------------------------------------ACTTTT--CAGGAG-------CGAAT----TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTG----------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................22113359.001335968019701124810
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................211937.0093756522003500
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................191784.0078460007780
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................211170.00170671001020
........................................................................................................................................CGGTATACCTTCAGTATACGTAAC.....................................................................241147.0014702001450
...........................................................................................................................................TATACCTTCAGTATACGTAACT....................................................................221137.0013714001320
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................201125.0012540700780
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................221124.0012448001120
......................................................................................................ACGTATACTGAATGTATC.............................................................................................................181108.0010810001070
......................................................................................................ACGTATACTGAATGTATCCTGAA........................................................................................................231104.0010420001020
...........................................................................................................................................TATACCTTCAGTATACGTAAC.....................................................................21182.00820200800
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................23181.00812300760
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................20170.00707000000
......................................................................................................ACGTATACTGAATGTATCCTGAC........................................................................................................23168.00680000680
.......................................................................................................CGTATACTGAATGTATCCTGAC........................................................................................................22167.00670200650
.......................................................................................................CGTATACTGAATGTATCCTGAA........................................................................................................22165.00653400580
......................................................................................................ACGTATACTGAATGTATCCTGC.........................................................................................................22141.00411100390
...........................................................................................................................................TATACCTTCAGTATACGTAACC....................................................................22134.00340000340
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................22132.00325300240
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................22129.00295100230
......................................................................................................ACGTATACTGAATGTATCCC...........................................................................................................20124.00240000240
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................20122.00225100160
......................................................................................................ACGTATACTGAATGTATCCTGG.........................................................................................................22118.00182100150
........................................................................................................................................CGGTATACCTTCAGTATACGTAACT....................................................................25114.00140000140
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................21113.00130000130
........................................................................................................................................CGGTATACCTTCAGTATACGT........................................................................21111.0011230060
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................20111.00111100000
.......................................................................................................CGTATACTGAATGTATCCTGAAA.......................................................................................................23110.00100000100
.......................................................................................................CGTATACTGAATGTATCCTGACC.......................................................................................................23110.00100000100
........................................................................................................GTATACTGAATGTATCCTG..........................................................................................................1919.009800010
.......................................................................................................CGTATACTGAATGTATCC............................................................................................................1819.009100080
..........................................................................................................ATACTGAATGTATCCTGA.........................................................................................................1819.009000090
......................................................................................................ACGTATACTGAATGTATCCTGATC.......................................................................................................2418.008000080
........................................................................................................................................CGGTATACCTTCAGTATACGTA.......................................................................2218.008200060
.........................................................................................................TATACTGAATGTATCCTGA.........................................................................................................1917.007300040
........................................................................................................................................CGGTATACCTTCAGTATACGTAACC....................................................................2516.006000060
...........................................................................................................................................TATACCTTCAGTATACGTAACAC...................................................................2315.005010040
......................................................................................................ACGTATACTGAATGTATCCTT..........................................................................................................2115.005200030
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1914.004400000
...................................................................................................TATACGTATACTGAATGTATCC............................................................................................................2214.004100030
....................................................................................................ATACGTATACTGAATGTATCCT...........................................................................................................2214.004000040
.........................................................................................................................................GGTATACCTTCAGTATACGTAAC.....................................................................2314.004000040
.......................................................................................................CGTATACTGAATGTATCCTGTT........................................................................................................2214.004000040
............................................................................................................................................ATACCTTCAGTATACGTAAC.....................................................................2014.004000040
......................................................................................................ACGTATACTGAATGTATCCTGAG........................................................................................................2314.004000040
......................................................................................................ACGTATACTGAATGTATCCTGAAA.......................................................................................................2414.004000040
............................................................................................................................................ATACCTTCAGTATACGTAACAC...................................................................2213.003000030
........................................................................................................GTATACTGAATGTATCCTGAA........................................................................................................2113.003000030
.......................................................................................................CGTATACTGAATGTATCCTGATC.......................................................................................................2313.003000030
......................................................................................................ACGTATACTGAATGTATCCTGAGT.......................................................................................................2413.003000030
..........................................................................................................................................GTATACCTTCAGTATACGTAAC.....................................................................2213.003100020
........................................................................................................GTATACTGAATGTATCCTGAC........................................................................................................2113.003100020
......................................................................................................ACGTATACTGAATGTATCCTGATA.......................................................................................................2413.003000030
......................................................................................................ACGTATACTGAATGTATCCTGACC.......................................................................................................2413.003000030
........................................................................................................GTATACTGAATGTATCCTGAAA.......................................................................................................2213.003000030
.....................................................................................................TACGTATACTGAATGTATCCTG..........................................................................................................2213.003110010
.......................................................................................................CGTATACTGAATGTATCCTGAG........................................................................................................2213.003010020
........................................................................................................................................CGGTATACCTTCAGTATACGC........................................................................2112.002000020
......................................................................................................ACGTATACTGAATGTATCCTC..........................................................................................................2112.002100010
............................................................................................................................................ATACCTTCAGTATACGTAACT....................................................................2112.002200000
.....................................................................................................TACGTATACTGAATGTATCCTGA.........................................................................................................2312.002200000
.......................................................................................................CGTATACTGAATGTATCCTGATA.......................................................................................................2312.002000020
.......................................................................................................CGTATACTGAATGTATCCTGACA.......................................................................................................2312.002000020
............................................................................................................................................ATACCTTCAGTATACGTAACA....................................................................2112.002100010
........................................................................................................................................CGGTATACCTTCAGTATACGTAC......................................................................2312.002000020
........................................................................................................................................CGGTATACCTTCAGTATACGTC.......................................................................2212.002100010
........................................................................................................................................CGGTATACCTTCAGTATACGTAA......................................................................2312.002000020
........................................................................................................GTATACTGAATGTATCCTGACC.......................................................................................................2212.002000020
........................................................................................................GTATACTGAATGTATCCTGAAAC......................................................................................................2311.001000010
........................................................................AT----TGTTGAGCCTGTGCAACTT....................................................................................................................................2111.001000010
.........................................................................................................................................GGTATACCTTCAGTATAC..........................................................................1811.001100000
......................................................................................................................................TCCGGTATACCTTCAGTATACG.........................................................................2211.001010000
......................................................................................................ACGTATACTGAATGTATCCTGAAG.......................................................................................................2411.001000010
...................................................................................................................................CTATCCGGTATACCTTCAGTATACGTAAC.....................................................................2911.001000010
........................................................................................................GTATACTGAATGTATCCTGAGC.......................................................................................................2211.001000010
........................................................................................................GTATACTGAATGTATCCTGAAC.......................................................................................................2211.001000010
........................................................................................................GTATACTGAATGTATCCTGAGTT......................................................................................................2311.001000010
....................................................................................................ATACGTATACTGAATGTATCC............................................................................................................2111.001000010
droGri2
GACA---------------------CTC--CAAA---------G-GACACTCT----------------TG---------TAGAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTG----------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................ACGTATACTGAATGTATCCTGA.........................................................................................................221145.001451450
......................................................................................................ACGTATACTGAATGTATCCTG..........................................................................................................21134.0034340
.......................................................................................................CGTATACTGAATGTATCCTGA.........................................................................................................21113.0013130
.......................................................................................................CGTATACTGAATGTATCCTG..........................................................................................................2016.00660
.......................................................................................................CGTATACTGAATGTATCCTGAT........................................................................................................2215.00550
......................................................................................................ACGTATACTGAATGTATCCT...........................................................................................................2015.00550
........................................................................................................................................CGGTATACCTTCAGTATACG.........................................................................2012.00220
...........................................................................................................................................TATACCTTCAGTATACGTAACA....................................................................2211.00110
.........................................................................................................................................GGTATACCTTCAGTATACGTAAC.....................................................................2311.00110
......................................................................................................ACGTATACTGAATGTATCCTGT.........................................................................................................2211.00110
.......................................................................................................CGTATACTGAATGTATCCT...........................................................................................................1911.00110
......................................................................................................ACGTATACTGAATGTATCCTGAGTGA.....................................................................................................2611.00110
........................................................................................................GTATACTGAATGTATCCTGA.........................................................................................................2011.00110
......................................................................................................ACGTATACTGAATGTATCCTGAT........................................................................................................2311.00110
......................................................................................................ACGTATACTGAATGTATCC............................................................................................................1911.00110
.........................................................................................................TATACTGAATGTATCCTGAAA.......................................................................................................2120.50110

Generated: 10/20/2015 at 07:31 PM