ID:

der-mir-283

 Coordinate:

scaffold_4690:11632490-11632584 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [Dere\GG17887-in]; utr5 [utr5_plus_15220]; pre_miRNA [Dere\mir-283-RM]; miRNA [Dere\miR-283-RA]

No Repeatable elements found

Sense Strand Reads

GCAATAGTAATTAATGTTAAGATTGGAAGAAGAGAAAAGTGTCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATATGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATAAGCGCAACAAACCGAAACCAAACACCACAAAAAC

**************************************************.((((((..((((((..(((((((((((.(((((((((......................))))))))))))))))))))..))))))..))))))...********************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 GSM1528801

follicle cells		 M057

embryo

 V040

embryo

 V108

head

 V107

male body		 V060

head
.................................................................AAATATCAGCTGGTAATTCTGGG........................................................................................................... 23 0 1 25414.00 25414 15648 2306 2608 2564 1692 522 74
.................................................................AAATATCAGCTGGTAATTCTGG............................................................................................................ 22 0 1 25109.00 25109 23725 109 1070 32 107 59 7
.................................................................AAATATCAGCTGGTAATTCTG............................................................................................................. 21 0 1 14662.00 14662 13881 112 137 47 316 161 8
.................................................................AAATATCAGCTGGTAATTCT.............................................................................................................. 20 0 1 3236.00 3236 1618 16 21 22 738 790 31
.................................................................AAATATCAGCTGGTAATTCTGGGT.......................................................................................................... 24 1 1 2766.00 2766 321 1767 45 102 166 354 11
..................................................................AATATCAGCTGGTAATTCTGG............................................................................................................ 21 0 1 1696.00 1696 1694 0 0 0 1 1 0
..................................................................AATATCAGCTGGTAATTCTGGG........................................................................................................... 22 0 1 1219.00 1219 1185 16 2 6 7 3 0
..................................................................AATATCAGCTGGTAATTCTG............................................................................................................. 20 0 1 984.00 984 984 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGA.......................................................................................................... 24 0 1 956.00 956 214 14 69 78 156 417 8
.................................................................AAATATCAGCTGGTAATTCTTGG........................................................................................................... 23 1 1 598.00 598 195 0 4 362 34 2 1
.................................................................AAATATCAGCTGGTAATTCTGGT........................................................................................................... 23 1 1 530.00 530 172 200 9 76 33 36 4
.................................................................AAATATCAGCTGGTAATTCTGT............................................................................................................ 22 1 1 300.00 300 219 0 1 1 27 50 2
.................................................................AAATATCAGCTGGTAATTCTTG............................................................................................................ 22 1 1 297.00 297 292 0 1 4 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGTG........................................................................................................... 23 1 1 281.00 281 12 1 0 251 15 1 1
.................................................................AGATATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 248.00 248 30 0 210 5 3 0 0
.................................................................AAATATCAGCTGGGAATTCTGGG........................................................................................................... 23 1 1 241.00 241 99 114 10 13 3 0 2
.................................................................AAATATCAGCTGGTAATTCTT............................................................................................................. 21 1 1 229.00 229 212 0 0 1 10 6 0
.................................................................AAATATCAGCTGGTAATTCTGGA........................................................................................................... 23 1 1 173.00 173 89 21 10 5 38 8 2
.................................................................AAATATCAGCTGGGAATTCTGG............................................................................................................ 22 1 1 170.00 170 164 5 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATTC............................................................................................................... 19 0 1 152.00 152 46 0 59 0 25 21 1
.................................................................AAATATAAGCTGGTAATTCTGG............................................................................................................ 22 1 1 137.00 137 137 0 0 0 0 0 0
.................................................................AGATATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 122.00 122 43 0 79 0 0 0 0
................................................................................................................CGGAATTTCAGTTGGTATCGAC............................................................. 22 0 1 118.00 118 60 0 23 2 9 24 0
..............................................TCACACGATTCTCAAAGGT.................................................................................................................................. 19 0 1 113.00 113 43 0 10 13 22 24 1
.................................................................AAATATCAGCTGGGAATTCTG............................................................................................................. 21 1 1 113.00 113 102 7 1 2 1 0 0
...................................................................ATATCAGCTGGTAATTCTGG............................................................................................................ 20 0 1 113.00 113 105 0 7 0 0 1 0
...................................................................ATATCAGCTGGTAATTCTGGG........................................................................................................... 21 0 1 107.00 107 76 2 4 20 1 3 1
.................................................................AAATATAAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 97.00 97 88 2 0 1 6 0 0
.................................................................AAATATCAGCTGGTAATT................................................................................................................ 18 0 1 79.00 79 10 0 0 2 32 35 0
.................................................................AAATATCAGCTGGGAATTCTGGGT.......................................................................................................... 24 2 1 79.00 79 2 75 0 1 1 0 0
.................................................................TAATATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 73.00 73 37 0 33 1 2 0 0
.................................................................AAATATAAGCTGGTAATTCTG............................................................................................................. 21 1 1 72.00 72 70 0 0 0 2 0 0
.................................................................AAATATCAGCTGGTAATTCTGGC........................................................................................................... 23 1 1 71.00 71 28 1 15 5 21 0 1
..................................................................AATATCAGCTGGTAATTCT.............................................................................................................. 19 0 1 71.00 71 71 0 0 0 0 0 0
.................................................................AAATATCATCTGGTAATTCTGGG........................................................................................................... 23 1 1 67.00 67 38 3 0 11 13 2 0
.................................................................TAATATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 64.00 64 56 0 8 0 0 0 0
.................................................................AAATATCAGCTGGAAATTCTGGG........................................................................................................... 23 1 1 63.00 63 30 22 3 3 5 0 0
.................................................................AAATATCAGCTGGCAATTCTGGG........................................................................................................... 23 1 1 62.00 62 30 7 3 19 3 0 0
..................................................................AATATCAGCTGGTAATTCTGGGT.......................................................................................................... 23 1 1 57.00 57 18 39 0 0 0 0 0
.....................................................................ATCAGCTGGTAATTCTGGG........................................................................................................... 19 0 1 56.00 56 16 2 1 30 4 3 0
.................................................................AAATATCAGCTGGTAATTCTTTG........................................................................................................... 23 2 1 55.00 55 1 0 0 54 0 0 0
.................................................................AAATATCATCTGGTAATTCTGG............................................................................................................ 22 1 1 54.00 54 52 0 0 0 2 0 0
.................................................................AAATATCAGCTGGTAATTCTTGT........................................................................................................... 23 2 1 53.00 53 3 0 2 46 1 0 1
.................................................................AAATATCAGCTGTTAATTCTGGG........................................................................................................... 23 1 1 52.00 52 34 2 0 11 5 0 0
.................................................................AAATATCACCTGGTAATTCTGGG........................................................................................................... 23 1 1 49.00 49 37 0 3 4 5 0 0
................................................................TAAATATCAGCTGGTAATTCTGG............................................................................................................ 23 0 1 48.00 48 40 7 1 0 0 0 0
.................................................................AAATATCATCTGGTAATTCTG............................................................................................................. 21 1 1 48.00 48 44 0 2 1 1 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGAT......................................................................................................... 25 1 1 48.00 48 5 28 0 0 3 12 0
.................................................................AAAGATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 47.00 47 3 4 36 3 1 0 0
...................................................................ATATCAGCTGGTAATTCTG............................................................................................................. 19 0 1 46.00 46 45 0 0 0 1 0 0
................................................................................................................CGGAATTTCAGTTGGTATCGA.............................................................. 21 0 1 46.00 46 28 0 7 1 3 7 0
.................................................................AAACATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 45.00 45 10 0 32 2 1 0 0
.................................................................AAATATCACCTGGTAATTCTGG............................................................................................................ 22 1 1 45.00 45 42 0 3 0 0 0 0
.................................................................AAATATCAGCTTGTAATTCTGGG........................................................................................................... 23 1 1 45.00 45 24 0 0 11 10 0 0
.................................................................AAAAATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 44.00 44 16 0 26 0 1 1 0
.................................................................AAATATCCGCTGGTAATTCTGGG........................................................................................................... 23 1 1 42.00 42 8 15 17 1 1 0 0
.................................................................AAATATCAGCTGGTAATTCTCGG........................................................................................................... 23 1 1 42.00 42 13 0 1 26 1 0 1
..................................................................AATATCAGCTGGTAATTCTGGGA.......................................................................................................... 23 0 1 42.00 42 26 0 0 0 0 15 1
.................................................................AAATATCAGCTGGAAATTCTGG............................................................................................................ 22 1 1 42.00 42 40 1 1 0 0 0 0
.................................................................AAATATCAGCTGGTATTTCTGG............................................................................................................ 22 1 1 41.00 41 40 0 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGA............................................................................................................ 22 1 1 41.00 41 38 0 1 0 1 1 0
.................................................................AAATATCGGCTGGTAATTCTGGG........................................................................................................... 23 1 1 41.00 41 10 28 1 0 1 1 0
.................................................................AAATATCAGCTGGTAATTCTGGGAA......................................................................................................... 25 1 1 40.00 40 4 0 4 0 8 23 1
.................................................................AAATATCAGCTGTTAATTCTGG............................................................................................................ 22 1 1 40.00 40 38 0 1 0 1 0 0
.................................................................AAATATCAGCTGGTATTTCTGGG........................................................................................................... 23 1 1 38.00 38 31 0 5 1 0 0 1
..................................................................AATATCAGCTGGTAATTCTGT............................................................................................................ 21 1 1 37.00 37 37 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGCG........................................................................................................... 23 1 1 34.00 34 9 1 3 20 1 0 0
.................................................................AAATATCACCTGGTAATTCTG............................................................................................................. 21 1 1 34.00 34 31 0 1 0 2 0 0
.................................................................ATATATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 34.00 34 15 0 18 0 1 0 0
.................................................................AAATATCAGCTGGCAATTCTGG............................................................................................................ 22 1 1 34.00 34 33 0 1 0 0 0 0
.................................................................AAACATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 31.00 31 17 0 13 0 1 0 0
.................................................................AAATATCAGCTGGTATTTCTG............................................................................................................. 21 1 1 31.00 31 31 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCGGG............................................................................................................ 22 1 1 29.00 29 28 1 0 0 0 0 0
.................................................................AAATATCAGCTGGCAATTCTG............................................................................................................. 21 1 1 29.00 29 25 2 2 0 0 0 0
.................................................................AACTATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 29.00 29 0 10 13 2 3 1 0
.................................................................AAATATCAGCTGGTAATTCTGGGTT......................................................................................................... 25 2 1 29.00 29 14 4 1 0 1 9 0
................................................................TAAATATCAGCTGGTAATTCTG............................................................................................................. 22 0 1 28.00 28 26 0 0 0 2 0 0
................................................................TAAATATCAGCTGGTAATTCTGGG........................................................................................................... 24 0 1 28.00 28 21 0 0 4 2 1 0
.................................................................AAATATCAACTGGTAATTCTGGG........................................................................................................... 23 1 1 28.00 28 22 1 2 3 0 0 0
.....................................................................ATCAGCTGGTAATTCTGG............................................................................................................ 18 0 1 27.00 27 25 0 1 1 0 0 0
.................................................................AAAAATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 26.00 26 16 0 10 0 0 0 0
.................................................................TAATATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 26.00 26 24 0 2 0 0 0 0
.................................................................AAATATCAGCTGGAAATTCTG............................................................................................................. 21 1 1 25.00 25 24 0 0 1 0 0 0
.................................................................AAATATCAGCTGTTAATTCTG............................................................................................................. 21 1 1 25.00 25 22 0 0 1 1 1 0
.................................................................AAATATCAGCTGGTAATTCTGC............................................................................................................ 22 1 1 25.00 25 17 0 8 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTAG............................................................................................................ 22 1 1 24.00 24 23 0 1 0 0 0 0
.................................................................AAATATCAGCTTGTAATTCTG............................................................................................................. 21 1 1 24.00 24 20 0 0 0 4 0 0
.................................................................AGATATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 24.00 24 16 0 8 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTA............................................................................................................. 21 1 1 24.00 24 23 0 0 0 1 0 0
.................................................................AAATATCAGCTTGTAATTCTGG............................................................................................................ 22 1 1 24.00 24 22 0 0 0 2 0 0
.................................................................ATATATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 23.00 23 11 0 12 0 0 0 0
.................................................................AAGTATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 23.00 23 22 0 1 0 0 0 0
................................................................TAAATATCAGCTGGTAATTCT.............................................................................................................. 21 0 1 23.00 23 10 2 0 0 9 2 0
.................................................................AAATATTAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 22.00 22 14 2 2 3 1 0 0
.................................................................AAATATCAGCTGGTAATTCTAGG........................................................................................................... 23 1 1 22.00 22 9 0 1 11 1 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGC.......................................................................................................... 24 1 1 22.00 22 10 3 6 0 1 1 1
.................................................................AAATATCAGCTGGTAAGTCTGG............................................................................................................ 22 1 1 21.00 21 21 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAAGTCTGGG........................................................................................................... 23 1 1 20.00 20 10 7 0 3 0 0 0
................................................................GAAATATCAGCTGGTAATTCTGG............................................................................................................ 23 1 1 20.00 20 20 0 0 0 0 0 0
................................................................CAAATATCAGCTGGTAATTCTGGG........................................................................................................... 24 1 1 20.00 20 14 0 2 2 2 0 0
.................................................................AAATATCAGCCGGTAATTCTGGG........................................................................................................... 23 1 1 20.00 20 7 1 1 3 6 2 0
.................................................................AAATATCAGCTGGTAATTCTTGGT.......................................................................................................... 24 2 1 19.00 19 4 0 0 10 3 0 2
....................................................................TATCAGCTGGTAATTCTGGG........................................................................................................... 20 0 1 19.00 19 12 0 1 4 2 0 0
................................................................CAAATATCAGCTGGTAATTCTGG............................................................................................................ 23 1 1 19.00 19 17 0 2 0 0 0 0
...................................................................ATATCAGCTGGTAATTCTGGGT.......................................................................................................... 22 1 1 19.00 19 0 16 0 1 1 1 0
.................................................................AAGTATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 19.00 19 13 1 0 3 2 0 0
.................................................................AAATATCAGCTGGTAATCCTGGG........................................................................................................... 23 1 1 18.00 18 7 1 1 4 5 0 0
.................................................................AAATATCAGCCGGTAATTCTGG............................................................................................................ 22 1 1 18.00 18 14 0 3 1 0 0 0
.................................................................AAATAGCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 18.00 18 3 0 10 5 0 0 0
.................................................................AAATATCAGCTGGTTATTCTGG............................................................................................................ 22 1 1 18.00 18 18 0 0 0 0 0 0
.................................................................AAATATCCGCTGGTAATTCTGG............................................................................................................ 22 1 1 17.00 17 8 1 8 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGTT........................................................................................................... 23 2 1 17.00 17 3 0 0 11 0 3 0
.................................................................AAATATCGGCTGGTAATTCTGGGT.......................................................................................................... 24 2 1 17.00 17 0 17 0 0 0 0 0
.................................................................AAATACCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 17.00 17 15 0 0 2 0 0 0
.................................................................AAATATCAGTTGGTAATTCTGGG........................................................................................................... 23 1 1 17.00 17 5 6 3 2 0 1 0
.................................................................AAATATCAGCTGGTAATTCTGAG........................................................................................................... 23 1 1 16.00 16 5 0 1 7 3 0 0
.................................................................AAATATCAACTGGTAATTCTGG............................................................................................................ 22 1 1 16.00 16 16 0 0 0 0 0 0
.................................................................AAATATCAGCTGGGAATTCTGGT........................................................................................................... 23 2 1 16.00 16 3 12 0 0 1 0 0
.................................................................AAAGATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 16.00 16 1 0 14 1 0 0 0
.................................................................AAATATCAGCTGGAAATTCTGGGT.......................................................................................................... 24 2 1 16.00 16 0 14 0 0 1 1 0
.................................................................AAATATCAGCTGGTAATTCGGGG........................................................................................................... 23 1 1 16.00 16 14 0 0 2 0 0 0
.................................................................AAATATCAGCTGGTCATTCTGGG........................................................................................................... 23 1 1 15.00 15 0 0 4 10 1 0 0
.................................................................AAATATCAGCTGGTAATTGTGG............................................................................................................ 22 1 1 15.00 15 14 0 0 1 0 0 0
.................................................................AAATATCAGCTGGCAATTCTGGGT.......................................................................................................... 24 2 1 15.00 15 0 9 0 3 3 0 0
.................................................................AAATATCCGCTGGTAATTCTGGGT.......................................................................................................... 24 2 1 15.00 15 0 15 0 0 0 0 0
.................................................................AAATATCAGATGGTAATTCTGGG........................................................................................................... 23 1 1 15.00 15 2 7 0 0 6 0 0
..................................................................AATATCAGCTGGTAATTCTGTG........................................................................................................... 22 1 1 14.00 14 13 0 0 1 0 0 0
.................................................................AAATATCAGCTGGGAATTCT.............................................................................................................. 20 1 1 14.00 14 10 1 0 0 2 1 0
.................................................................AAATATCAGCTAGTAATTCTGGG........................................................................................................... 23 1 1 14.00 14 6 1 3 3 1 0 0
.................................................................AAGTATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 14.00 14 14 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTCG............................................................................................................ 22 1 1 14.00 14 13 0 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATTTTGGG........................................................................................................... 23 1 1 14.00 14 5 2 4 3 0 0 0
.................................................................AAATATTAGCTGGTAATTCTGG............................................................................................................ 22 1 1 14.00 14 13 0 1 0 0 0 0
.................................................................AAATATCAGCTGCTAATTCTGG............................................................................................................ 22 1 1 14.00 14 14 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATGCTGGG........................................................................................................... 23 1 1 14.00 14 1 9 0 4 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGTT.......................................................................................................... 24 2 1 14.00 14 7 3 0 2 1 0 1
.................................................................AAATATCAGCTGGTAATTCTC............................................................................................................. 21 1 1 14.00 14 10 0 2 0 1 1 0
.................................................................AAATATCAGCTGGTAATTCGG............................................................................................................. 21 1 1 14.00 14 14 0 0 0 0 0 0
................................................................GAAATATCAGCTGGTAATTCTG............................................................................................................. 22 1 1 13.00 13 13 0 0 0 0 0 0
....................................................................TATCAGCTGGTAATTCTG............................................................................................................. 18 0 1 13.00 13 13 0 0 0 0 0 0
...............................................CACACGATTCTCAAAGGT.................................................................................................................................. 18 0 1 13.00 13 7 0 3 1 2 0 0
.................................................................AAATATCAGCTGGTAAGTCTG............................................................................................................. 21 1 1 13.00 13 12 1 0 0 0 0 0
................................................................CAAATATCAGCTGGTAATTCTG............................................................................................................. 22 1 1 13.00 13 13 0 0 0 0 0 0
.................................................................AAATATCAGCTAGTAATTCTGG............................................................................................................ 22 1 1 13.00 13 13 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCCGGG........................................................................................................... 23 1 1 13.00 13 6 0 0 5 2 0 0
.................................................................AAATATCAGCTGGTTATTCTG............................................................................................................. 21 1 1 13.00 13 13 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGG.......................................................................................................... 24 1 1 13.00 13 3 8 0 2 0 0 0
.................................................................AAATATCAGTTGGTAATTCTGG............................................................................................................ 22 1 1 13.00 13 12 0 1 0 0 0 0
.................................................................AAATATCAACTGGTAATTCTG............................................................................................................. 21 1 1 13.00 13 11 0 0 0 2 0 0
.................................................................AAATATCAGCTGGTAATTCTTGGA.......................................................................................................... 24 1 1 13.00 13 2 0 0 7 4 0 0
..................................................................AATATCCGCTGGTAATTCTGG............................................................................................................ 21 1 1 13.00 13 13 0 0 0 0 0 0
....................................................................TATCAGCTGGTAATTCTGG............................................................................................................ 19 0 1 12.00 12 12 0 0 0 0 0 0
.................................................................AAATAACAGCTGGTAATTCTG............................................................................................................. 21 1 1 12.00 12 12 0 0 0 0 0 0
.............................................CTCACACGATTCTCAAAGGT.................................................................................................................................. 20 0 1 12.00 12 3 0 3 3 1 2 0
................................................................AAAATATCAGCTGGTAATTCTGGG........................................................................................................... 24 1 1 12.00 12 9 3 0 0 0 0 0
.................................................................AAATATCAGCGGGTAATTCTGGG........................................................................................................... 23 1 1 12.00 12 1 10 0 1 0 0 0
................................................................AAAATATCAGCTGGTAATTCTGG............................................................................................................ 23 1 1 12.00 12 12 0 0 0 0 0 0
.................................................................AAATAGCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 12.00 12 8 0 4 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTTT............................................................................................................ 22 2 1 12.00 12 12 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCCGG............................................................................................................ 22 1 1 12.00 12 11 0 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATGCTGGGT.......................................................................................................... 24 2 1 12.00 12 0 12 0 0 0 0 0
.................................................................AAATATCAGCTGATAATTCTGGG........................................................................................................... 23 1 1 12.00 12 4 1 3 3 1 0 0
.................................................................AAATATAAGCTGGTAATTCT.............................................................................................................. 20 1 1 12.00 12 7 0 0 0 3 2 0
.................................................................AAATCTCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 12.00 12 7 0 0 1 3 1 0
..................................................................AATATCAGCTGGGAATTCTGG............................................................................................................ 21 1 1 12.00 12 12 0 0 0 0 0 0
.................................................................AAATATTAGCTGGTAATTCTG............................................................................................................. 21 1 1 12.00 12 12 0 0 0 0 0 0
.................................................................AAATATCTGCTGGTAATTCTGGG........................................................................................................... 23 1 1 11.00 11 1 9 0 1 0 0 0
.................................................................AAATACCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 11.00 11 11 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTATGGG........................................................................................................... 23 1 1 11.00 11 0 7 0 1 3 0 0
.................................................................AAATATCAGCTGGTAATCCTGG............................................................................................................ 22 1 1 11.00 11 11 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTTTGG............................................................................................................ 22 1 1 10.00 10 9 0 1 0 0 0 0
.................................................................AAATGTCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 10.00 10 4 0 1 2 3 0 0
.................................................................AAATATCAGCTGGTAATTGTG............................................................................................................. 21 1 1 10.00 10 10 0 0 0 0 0 0
...................................................................ATATCAGCTGGTAATTCT.............................................................................................................. 18 0 1 10.00 10 5 0 1 1 3 0 0
.................................................................AAATATCAGCTGATAATTCTGG............................................................................................................ 22 1 1 10.00 10 9 1 0 0 0 0 0
................................................................................................................CGGAATTTCAGTTGGTATCG............................................................... 20 0 1 10.00 10 6 0 0 0 0 4 0
.................................................................AGATATCAGCTGGTAATTCTGGGT.......................................................................................................... 24 2 1 10.00 10 0 0 9 0 1 0 0
.................................................................AAATCTCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 10.00 10 10 0 0 0 0 0 0
.................................................................AAATATCATCTGGTAATTCT.............................................................................................................. 20 1 1 10.00 10 2 0 0 1 6 1 0
.................................................................AAATATCAGCTGGTGATTCTGGG........................................................................................................... 23 1 1 10.00 10 2 0 1 5 1 1 0
..................................................................AATATCCGCTGGTAATTCTG............................................................................................................. 20 1 1 9.00 9 9 0 0 0 0 0 0
.................................................................AAATACCAGCTGGTAATTCTG............................................................................................................. 21 1 1 9.00 9 9 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGAA.......................................................................................................... 24 1 1 9.00 9 6 0 0 0 2 1 0
..................................................................AATATCAGCTGGTAATTCTGGT........................................................................................................... 22 1 1 9.00 9 7 1 0 0 0 1 0
.................................................................AAATATCAGCTGGTAATTCC.............................................................................................................. 20 1 1 9.00 9 0 0 8 0 0 1 0
.................................................................AAATATCAGATGGTAATTCTGGGT.......................................................................................................... 24 2 1 9.00 9 0 5 0 0 4 0 0
.................................................................ATATATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 9.00 9 8 0 1 0 0 0 0
................................................................AAAATATCAGCTGGTAATTCTG............................................................................................................. 22 1 1 9.00 9 8 1 0 0 0 0 0
................................................................................................................CGGAATTTCAGTTGGTATCGACA............................................................ 23 1 1 9.00 9 0 6 3 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGAC.......................................................................................................... 24 2 1 9.00 9 0 9 0 0 0 0 0
.................................................................AAATATCAGGTGGTAATTCTGGGT.......................................................................................................... 24 2 1 9.00 9 0 9 0 0 0 0 0
.................................................................AAATATCAGCTTGTAATTCTTGG........................................................................................................... 23 2 1 9.00 9 0 0 0 8 0 0 1
.................................................................GAATATCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 9.00 9 1 1 0 6 1 0 0
.................................................................AAATATCCGCTGGTAATTCTG............................................................................................................. 21 1 1 9.00 9 6 2 1 0 0 0 0
.................................................................AAATATCAGCTGGTTATTCTGGG........................................................................................................... 23 1 1 8.00 8 6 0 0 2 0 0 0
.................................................................AAATATCAGCTGGTAATTGTGGG........................................................................................................... 23 1 1 8.00 8 6 0 0 0 2 0 0
.................................................................GAATATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 8.00 8 7 0 0 0 0 1 0
.................................................................AAAGATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 8.00 8 3 0 4 0 1 0 0
.................................................................AAATATCAGCTGTTAATTCTGTG........................................................................................................... 23 2 1 8.00 8 0 0 0 8 0 0 0
.................................................................AAATATCACCTGGTAATTCT.............................................................................................................. 20 1 1 8.00 8 7 0 0 0 1 0 0
.................................................................AAATATCAGCTCGTAATTCTGGG........................................................................................................... 23 1 1 8.00 8 2 1 1 4 0 0 0
.................................................................AAATCTCAGCTGGTAATTCTG............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTCTG........................................................................................................... 23 2 1 8.00 8 0 0 0 8 0 0 0
.................................................................AAATATGAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 8.00 8 5 0 2 0 1 0 0
.................................................................AAACATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 8.00 8 7 0 1 0 0 0 0
.................................................................AAATATCAGCTGGTAATTATGGGT.......................................................................................................... 24 2 1 8.00 8 0 3 0 1 0 3 1
.................................................................AAAAATCAGCTGGTAATTCTG............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGTGT.......................................................................................................... 24 2 1 8.00 8 0 0 0 6 1 1 0
.....................................................................ATCAGCTGGTAATTCTGGGT.......................................................................................................... 20 1 1 8.00 8 0 8 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTT............................................................................................................... 19 1 1 8.00 8 3 0 0 0 4 1 0
..................................................................AATATCAGCTGGTAATTCTGGA........................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTTCG........................................................................................................... 23 2 1 7.00 7 0 0 0 7 0 0 0
....................................................................TATCAGCTGGTAATTCTGGGAGC........................................................................................................ 23 0 1 7.00 7 1 0 2 2 2 0 0
..................................................................AATATCCGCTGGTAATTCTGGG........................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0
..................................................................AATATCATCTGGTAATTCTGG............................................................................................................ 21 1 1 7.00 7 7 0 0 0 0 0 0
.................................................................AAATATCACCTGGTAATTCTGGGT.......................................................................................................... 24 2 1 7.00 7 0 7 0 0 0 0 0
.................................................................AAATATCAGGTGGTAATTCTGGG........................................................................................................... 23 1 1 7.00 7 0 6 0 0 1 0 0
.................................................................AAATATCAGCTGGTAATTTTG............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
.................................................................AAATAACAGCTGGTAATTCTGG............................................................................................................ 22 1 1 7.00 7 7 0 0 0 0 0 0
..................................................................AATCTCAGCTGGTAATTCTG............................................................................................................. 20 1 1 7.00 7 7 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAACTCTGGG........................................................................................................... 23 1 1 7.00 7 1 2 0 4 0 0 0
.................................................................AAATAGCAGCTGGTAATTCTG............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATACTGGG........................................................................................................... 23 1 1 7.00 7 2 3 0 1 1 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGTA......................................................................................................... 25 2 1 7.00 7 5 0 0 1 0 1 0
..................................................................AATCTCAGCTGGTAATTCTGG............................................................................................................ 21 1 1 7.00 7 7 0 0 0 0 0 0
..................................................................TATATCAGCTGGTAATTCTGG............................................................................................................ 21 1 1 7.00 7 7 0 0 0 0 0 0
.................................................................AAATTTCAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 7.00 7 2 0 5 0 0 0 0
.................................................................AAATATCAGCTCGTAATTCTGG............................................................................................................ 22 1 1 7.00 7 6 0 1 0 0 0 0
......................................................................TCAGCTGGTAATTCTGGG........................................................................................................... 18 0 1 7.00 7 4 0 0 1 1 1 0
.................................................................GAATATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 7.00 7 6 0 1 0 0 0 0
.................................................................................................................GGAATTTCAGTTGGTATCGAC............................................................. 21 0 1 7.00 7 5 0 0 0 0 2 0
.................................................................AAATATCAGCAGGTAATTCTGGG........................................................................................................... 23 1 1 6.00 6 3 0 1 0 2 0 0
................................................................GAAATATCAGCTGGTAATTCTGGG........................................................................................................... 24 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCCG............................................................................................................. 21 1 1 6.00 6 4 1 0 0 1 0 0
.................................................................AAATATCAGCGGGTAATTCTGGGT.......................................................................................................... 24 2 1 6.00 6 0 6 0 0 0 0 0
.................................................................AAATATCAGCTGGTACTTCTGGG........................................................................................................... 23 1 1 6.00 6 1 0 0 4 1 0 0
.................................................................AAATATCAGCTGCTAATTCTGGG........................................................................................................... 23 1 1 6.00 6 4 0 0 1 1 0 0
.................................................................AAATATCGGCTGGTAATTCTG............................................................................................................. 21 1 1 6.00 6 4 1 0 1 0 0 0
..................................................................AATATCATCTGGTAATTCTGGG........................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAAGTCTGGGT.......................................................................................................... 24 2 1 6.00 6 0 6 0 0 0 0 0
.................................................................AAATATCGGCTGGTAATTCTGG............................................................................................................ 22 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGTA.......................................................................................................... 24 1 1 6.00 6 1 0 0 5 0 0 0
..................................................................AATATCAGCTGGTAATTCGGG............................................................................................................ 21 1 1 6.00 6 6 0 0 0 0 0 0
..................................................................AATATCAGCTGGTAATTCTGA............................................................................................................ 21 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................AAATATCATCTGGTAATTCTGTG........................................................................................................... 23 2 1 6.00 6 0 0 0 5 0 0 1
...................................................................AAATCAGCTGGTAATTCTGGG........................................................................................................... 21 1 1 6.00 6 4 0 1 0 1 0 0
.................................................................AACTATCAGCTGGTAATTCTGGGT.......................................................................................................... 24 2 1 6.00 6 0 5 0 0 0 1 0
.................................................................AAATATCAGCTGGTGATTCTGG............................................................................................................ 22 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAGTTCTGGG........................................................................................................... 23 1 1 6.00 6 4 0 1 1 0 0 0
................................................................................................................CTGAATTTCAGTTGGTATCGAC............................................................. 22 1 1 6.00 6 1 0 4 0 1 0 0
.................................................................AAATATCAGCTAGTAATTCTG............................................................................................................. 21 1 1 6.00 6 5 0 0 1 0 0 0
.................................................................AAATATCAGGTGGTAATTCTGG............................................................................................................ 22 1 1 6.00 6 4 2 0 0 0 0 0
...............................................................................................................TCGGAATTTCAGTTGGTATCGA.............................................................. 22 0 1 6.00 6 4 0 1 0 0 1 0
.................................................................AAATATCTGCTGGTAATTCTGGGT.......................................................................................................... 24 2 1 6.00 6 0 6 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCGGGGT.......................................................................................................... 24 2 1 6.00 6 0 6 0 0 0 0 0
................................................................................................................CGGAATTTCAGTTGGTATCGACT............................................................ 23 0 1 6.00 6 4 0 1 0 0 1 0
..................................................................AATATCAGCTGGAAATTCTGG............................................................................................................ 21 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTATTTCT.............................................................................................................. 20 1 1 6.00 6 5 0 0 0 0 1 0
.................................................................AACTATCAGCTGGTAATTCTGG............................................................................................................ 22 1 1 6.00 6 0 0 6 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGGAAA......................................................................................................... 25 2 1 5.00 5 4 0 0 0 1 0 0
.................................................................AAATATCAGCTGGTAATTCTGGGTTT........................................................................................................ 26 3 1 5.00 5 3 0 0 1 0 1 0
.................................................................AAATATCAGCTGGGAATTCTTGG........................................................................................................... 23 2 1 5.00 5 1 0 0 4 0 0 0
.................................................................AAATAACAGCTGGTAATTCTGGG........................................................................................................... 23 1 1 5.00 5 4 0 0 1 0 0 0
................................................................................................................CTGAATTTCAGTTGGTATCGA.............................................................. 21 1 1 5.00 5 0 0 5 0 0 0 0
.................................................................AAATATCAGATGGTAATTCTGG............................................................................................................ 22 1 1 5.00 5 3 2 0 0 0 0 0
.................................................................AAATATCAGATGGTAATTCTG............................................................................................................. 21 1 1 5.00 5 0 1 0 0 4 0 0
................................................................CAAATATCAGCTGGTAATTCT.............................................................................................................. 21 1 1 5.00 5 3 0 0 0 2 0 0
..................................................................AATATCAGCTGGTAATTCTTGG........................................................................................................... 22 1 1 5.00 5 4 0 0 1 0 0 0
..................................................................AATATCAGCTGGTGATTCTGGG........................................................................................................... 22 1 1 5.00 5 0 5 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTTGA........................................................................................................... 23 2 1 5.00 5 3 0 0 0 2 0 0
.................................................................AAATATCAGCTGGTAATTCCTGG........................................................................................................... 23 2 1 5.00 5 1 0 1 3 0 0 0
.................................................................AAATATCAGCTGTTAATTCTTGG........................................................................................................... 23 2 1 5.00 5 0 0 0 5 0 0 0
.................................................................AAATATCAGCTGGTAATTAT.............................................................................................................. 20 1 1 5.00 5 0 0 0 0 5 0 0
..................................................................AGTATCAGCTGGTAATTCTGG............................................................................................................ 21 1 1 5.00 5 5 0 0 0 0 0 0
..................................................................AATATCACCTGGTAATTCTGGG........................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0
.................................................................AAATATCAGCTGGAAATTCT.............................................................................................................. 20 1 1 5.00 5 5 0 0 0 0 0 0
...................................................................ATATCAGCTGGTAATTCTGGGA.......................................................................................................... 22 0 1 5.00 5 0 0 1 2 0 2 0
.................................................................AAATATCAGCTGGTAGTTCTGG............................................................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0
..............................................................TAAAAATATCAGCTGGTAATTCTGGG........................................................................................................... 26 3 1 5.00 5 0 5 0 0 0 0 0
.................................................................AAATATCAGCCGGTAATTCTG............................................................................................................. 21 1 1 5.00 5 5 0 0 0 0 0 0
.................................................................AAGTATCAGCTGGTAATTCT.............................................................................................................. 20 1 1 5.00 5 2 0 0 0 2 0 1
.................................................................AAATATCAGCTGGCAATTCTTGG........................................................................................................... 23 2 1 5.00 5 0 0 0 4 1 0 0
.................................................................AAATATCAGCTGGTAATACTGG............................................................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCTGTGA.......................................................................................................... 24 1 1 5.00 5 0 0 0 4 0 0 1
..................................................................AATATCAGCTGGAAATTCTG............................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0 0
..................................................................AATATCAGCTGGTGATTCTGGGT.......................................................................................................... 23 2 1 4.00 4 0 4 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATCCTGGGT.......................................................................................................... 24 2 1 4.00 4 1 3 0 0 0 0 0
.................................................................AAATATAAGCTGGTAATTCTGGT........................................................................................................... 23 2 1 4.00 4 2 2 0 0 0 0 0
..................................................................AATCTCAGCTGGTAATTCTGGG........................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0
.................................................................AAATATCAACTGGTAATTCT.............................................................................................................. 20 1 1 4.00 4 2 0 0 0 1 1 0
.................................................................AAATATCAGCTGGTAATTATGG............................................................................................................ 22 1 1 4.00 4 2 0 0 0 2 0 0
.................................................................TAATATCAGCTGGTAATTCT.............................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0 0
..................................................................AATATTAGCTGGTAATTCTGG............................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0 0
..............................................CCTCACGATTCTCAAAGGT.................................................................................................................................. 19 2 1 4.00 4 0 0 2 2 0 0 0
.................................................................AAATATCAGCTCGTAATTCTG............................................................................................................. 21 1 1 4.00 4 2 0 0 1 1 0 0
..................................................................AATACCAGCTGGTAATTCTGG............................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0 0
.................................................................TAATATCAGCTGGTAATTCGGGG........................................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0 0
.................................................................AAATATCAGCTTGTAATTCT.............................................................................................................. 20 1 1 4.00 4 1 0 0 0 3 0 0
..................................................................AATATCAGCTGGCAATTCTG............................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0 0
.................................................................AAATATCAGCTGGTAATTCAA............................................................................................................. 21 2 1 4.00 4 4 0 0 0 0 0 0
..................................................................AATATCAGATGGTAATTCTGG............................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0 0

Anti-sense strand reads

CGTTATCATTAATTACAATTCTAACCTTCTTCTCTTTTCACAGTGGAGTGTGCTAAGAGTTTCCATTTATAGTCGACCATTAAGACCCTCGATTCGGATTTATACTTTGTGAGCCTTAAAGTCAACCATAGCTGAAAAAACTTAACGTAAACTAGTGGTATTCGCGTTGTTTGGCTTTGGTTTGTGGTGTTTTTG

**********************************************.((((((..((((((..(((((((((((.(((((((((......................))))))))))))))))))))..))))))..))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040

embryo

 V107

male body		 M055

female body
...........................................TGGACTGTGCTAAGCATTT..................................................................................................................................... 19 3 16 0.75 12 0 9 3
..............................................................................................................................CATGGCTGAAGAAACGTAACGT............................................... 22 3 2 0.50 1 1 0 0
.....................................TCACACTGTAGTCTGCTAAG.......................................................................................................................................... 20 3 11 0.09 1 0 0 1
..........................................................................................................TTGTTAGCCTGAAAGTCGA...................................................................... 19 3 20 0.05 1 1 0 0
.............................................................................................................................................................................GCTTTGGGTTGGGGTGTTC... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4690:11632440-11632634 - der-mir-283 Known_mirbase GCAATAG-------TAAT---------------------------TAATGTTAAGATTGGAAG-------------------------A------------------------------------AGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAACCGAAA--CCA------AACA-------CCA-----------CA---------A---A----------------AAC
droYak3 X:9587542-9587748 + dya-mir-283 Known_mirbase GTAATAC---ATAGTAAT---------------------------TAATGTAAAGATTGAAAA-------------------------AAAAA----------------------AAAAAAAAACAGAGAAAAGTGT----CACCTTACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACCAACCGAAA--CCA------AACA-------CCA-----------C----------------------------------
droSec2 scaffold_73:136354-136569 + dse-mir-283 Known_mirbase GTAATA----ATAGTATT---------------------------TAATGTTGGGATTGCAAA-------------------------AAAAA-----------------------AAAAAAAACAGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAACCGAAA--CCA------AACA-------CCA-----------CAA------------AAAAAA-----------GAG
droSim2 x:14567225-14567438 + dsi-mir-283 Known_mirbase GTAATA----ATAGTACT---------------------------TAATGTTGGGATTGAAAA-------------------------AAAAA-----------------------AAAAAAAACAGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAACCGAAA--CCA------AACA-------CCA-----------CAA------------AAAA-------------AAA
dm3 chrX:15401936-15402140 + dme-mir-283 Known_mirbase GTAATAG-------TACT---------------------------TAATGTTGAGATTGAAAA-------------------------G----------------------------AAAAAAATAGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAAACGAAA--CCA------AACA-------CCA-----------CAA------------AAA--------------AGA
droEug1 scf7180000409533:551280-551463 + A-G----------------------------------TAAGA---------------------------------------------------GTT-------------------TG--AGAGAGAGAGAAAAGTGTC---CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCA-AAAA--------------GCGCAA-AAACCGAAA--CCA-----AAACA-------CC---------------------TAA---A----------------ACC
droBia1 scf7180000302041:36389-36568 + GTTAGAG---------------------------------------------------------------------------------------CT-------------------TA--AGAGAGAGAGAAAAGTGC----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAC-ACCCGAAA--CTA------AACA-------CCA-----------CA---------A---A----------------AAA
droTak1 scf7180000414432:172256-172451 + GTAAGAGAT----------------------------TAAGAGTTTAAG----------G--------------------------------------------------------------AAGAGAGAAAAGTGTC---CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-AAAA--------------GCGCAA-AAACCGAAA--CCA------AACA-------CG------------CAA--A-ACTAA---A----------------AAC
droEle1 scf7180000491023:1180268-1180478 - TAGATA----A---GAATGA--GTGC----------------------TGGAGGGAAAGTAAT-------------------------AGGAT----------------------TA--AGAGAGGGAGAAAAGTGT----CACATCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCAAA--A--------------GCGCAA-AAACTGAAA--CCA------AACA-------CCA-----------AC-------CAA---A----------------ACT
droRho1 scf7180000777097:75097-75300 - GCGAGAGTG----------A--GTGCTAGAGGGAAAGTAAGA---------------------------------------------------GTTTA-------------------------AAGGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAA-AAACCGAAA--CCA------AACA-------CCA-----------AA-------AAA---A---AA-----------CTT
droFic1 scf7180000454038:645749-645945 + GCAAGAA--------------------------------------------------------------------------------------G---------------------TAAGAAAGAGAGAGAAAAGTGT----CACCTCACAGGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAA-AAACCGAAAACCCA------AACA-------CAA-----------AA-------TAA---A----ACCCCAACGCAAAAT
droKik1 scf7180000302696:759804-759992 + GCGAAAG-------TGA-----------------------GA---------------------------------------------------GATTAGCA---------------------AAGA---ACCAGTGTC-ACCTCCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCGTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCA-AGAA-----------------AAA-------------------AAAACA---------AACTAAAACTT------A-AACCAAAAA----------------CAC
droAna3 scaffold_12929:2900353-2900493 - dan-mir-283 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------------------------CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTCGAATTGCATTTTATCACCA-AAAACTACCTAAAAAAAGCCGCAA---------------------------------------------------------------------------------
droBip1 scf7180000396740:82079-82227 - ----------------------------------------------------------------------------------------------------------------------------------AAAGTGTTCACCACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTCTGAATTGCATTTTATCACCA-AAAA-------------------A--------AA--TTA------AATA-------T--------------A---------A---A----------------AAA
dp5 XL_group1a:975978-976171 + dps-mir-283 Known_mirbase GAAAGAGAGA------------GAG--AGA----------------------------------------------GCGAACGAGAGA-----GAGTGCCAGAGAAAGCGACGTC---------------ACGA--TT---CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAA-GA----A-----A------AACA-------CAA-----------C-------------------------------AAT
droPer2 scaffold_26:1090642-1090857 + dpe-mir-283 Known_mirbase GAGAGAGAGA--------GAGAGAGAG------------------------AG------AGAGAGAGAGAGAGAGAGCGAACGAGAGA-----GAGTGCCAGAGAAAGCGACGTC---------------ACGA--TT---CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAA-GA----A-----A------AACA-------CAA-----------C-------------------------------AAT
droWil2 scf2_1100000004515:1594742-1594917 - dwi-mir-283 Known_mirbase GAGTGG--------GAATGA--GTGCGA----------------------GTG------GGA------------------------------------------------------------------------GGG----AGCCTAACG-AATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATATTTGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCA-AAAA----------------AAA--------------------AAAACA-------AAA-----------AA-ATCAATCAA---A----------------AAC
droVir3 scaffold_12970:2047638-2047797 + dvi-mir-283 Known_mirbase GAGAAAG-------TAC-----------------------------------------------------------------------------------------------------------------AAGATGT----CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA----A--------------GCGCAAA-AA----A-----A------AATA-------ACA-----------GA---------A---G----------------AAT
droMoj3 scaffold_6359:3257656-3257878 + dmo-mir-283 Known_mirbase GCATGTGTGCA------TGG--CTGTT-------------------AGTGTG------T-----GAGCAAGAGCGAGTGAAC------------------------------------------------CAGCTGT----CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCC-AATA--TGAAACACTCGGAATTTCAGTTGGTATATACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAA-----------CCAAAAAAGAACAAGAAAAGCAAAGAGAAACTTA---A-A-AATAA-AAA----------------CAA
droGri2 scaffold_14853:6953462-6953647 - dgr-mir-283 Known_mirbase CAGACAGAGA----------------------------------------------------------------------------------------------------------------AAGAAAGAATGACGT----CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------TCGCAAA-AA----AAACCCAAAAAAAAACA-------AAA-----------GA-AAA-ATCCA---A----------------AAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCAATAG-------TAAT---------------------------TAATGTTAAGATTGGAAG-------------------------A------------------------------------AGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAACCGAAA--CCA------AACA-------CCA-----------CA---------A---A----------------AACSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................23125414.002541415648260874256452216922306
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22125109.002510923725107073259107109
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................21114662.001466213881137847161316112
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2013236.003236161821312279073816
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2412766.00276632145111023541661767
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2111696.0016961694000110
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2211219.00121911852063716
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201984.00984984000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................241956.009562146987841715614
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231530.0053017294763633200
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................221300.0030021912150270
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................211229.002292120016100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................231173.0017389102583821
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................191152.0015246591021250
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................221118.001186023022490
.................................................................................................................................................TCACACGATTCTCAAAGGT..........................................................................................................................................................................................................191113.00113431011324220
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................201113.00113105700100
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211107.00107764120312
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................18179.00791000235320
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................23171.00712815150211
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19171.007171000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23157.0057180000039
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19156.0056161030342
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23148.004840100007
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25148.0048500012328
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19146.004645000010
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................21146.004628701730
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23142.0042260101500
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22141.004138100110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................25140.004044102380
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................21137.003737000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................25129.002914100914
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................22128.002826000020
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24128.002821004120
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18127.002725101000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22125.002517800000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................21124.002423000010
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................21123.002310000292
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................24122.002210610113
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20119.001912104020
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................22119.001900011116
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................23117.001730011300
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24114.00147012013
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................21114.001410200110
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................18113.001313000000
..................................................................................................................................................CACACGATTCTCAAAGGT..........................................................................................................................................................................................................18113.00137301020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24113.00133002008
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19112.001212000000
................................................................................................................................................CTCACACGATTCTCAAAGGT..........................................................................................................................................................................................................20112.00123303210
....................................................................................................................................................................AAATATCAGCTGGTAATTCTTT....................................................................................................................................................................................22112.001212000000
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................18110.00105101030
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20110.00106000400
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2219.0097000101
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................2019.0090800100
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................2319.0090300006
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAC..................................................................................................................................................................................2419.0090000009
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2018.0080000008
....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................1918.0083000140
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2217.0077000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................2317.0071202020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2517.0075001100
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................1817.0074001110
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................2117.0075000200
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGA....................................................................................................................................................................................2116.0066000000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................2216.0064100100
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................2316.0064100100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................2615.0053001100
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2215.0050102200
....................................................................................................................................................................AAATATCAGCTGGTAATTCAA.....................................................................................................................................................................................2114.0044000000
droYak3
GTAATAC---ATAGTAAT---------------------------TAATGTAAAGATTGAAAA-------------------------AAAAA----------------------AAAAAAAAACAGAGAAAAGTGT----CACCTTACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACCAACCGAAA--CCA------AACA-------CCA-----------C----------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................23173417.0073417874154794930872143184163002262
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22130577.0030577117177371252992141210282
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2116528.006528849495763345314260001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2412451.0024518232295126064154001734
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2411753.0017538220272113352797000486
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................1911304.001304211259490331201847
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2111221.00122101212810000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2211175.001175211313570000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2011126.001126117611632215577161154
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................231439.004392941980100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231422.00422171642061716100001
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................221398.00398076303110080000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................241350.00350381029190010001
.................................................................................................................................................TTACACGATTCTCAAAGGT..........................................................................................................................................................................................................191336.003362511571121580000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201320.003201317000010001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................231274.00274748793171110000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................211183.00183049104511900014
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................191119.0011904545270020000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................251115.00115471923132300017
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................231111.001113010800000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................221101.001010198200000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211100.001003691580140000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................22193.00933731102220000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20188.00880751300000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23179.00790502900000000
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................18178.007821437003120370
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24165.00651203850010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................25159.00592424101800019
.................................................................................................................................................TTACACGATTCTCAAAGGC..........................................................................................................................................................................................................19151.0051114900000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19151.0051050010000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18151.0051046410000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22150.00509241700000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20148.00480251850000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24141.00411821330000005
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20135.00357111410020000
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................20134.0034013300000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................23132.0032222440000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23127.0027022200010002
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23127.0027121210110000
................................................................................................................................................CTTACACGATTCTCAAAGGT..........................................................................................................................................................................................................20126.0026021660020000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................26126.0026015000100019
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................23125.0025071800000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19123.0023020300000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19122.0022319000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25118.001856111310000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................23118.0018001700010000
..................................................................................................................................................TACACGATTCTCAAAGGT..........................................................................................................................................................................................................18118.001814850000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................26117.0017114100100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21117.0017013101020000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................22117.0017311300000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................21116.0016001501000000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................18115.0015012300000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................21114.001418410000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24114.0014013100000000
............................................................................................................................................................................................................TGAAACACTCGGAATTTCAGTTGGTAT.......................................................................................................................................27114.0014000000000014
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................24112.001250610000000
...........................................................................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT.........................................................................................................................................................24111.001105600000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................22111.0011011000000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................18110.001027010000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2518.00821400100000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGA....................................................................................................................................2018.00806200000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................2117.00704100020000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................2117.00706000010000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................2217.00702500000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2217.00707000000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACC..................................................................................................................................2316.00600600000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2016.00601200030000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2515.00501210100000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................2214.00400400000000
................................................................................................................................................CTTACACGATTCTCAAAGGC..........................................................................................................................................................................................................2014.00400400000000
....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................1914.00411200000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2014.00400200020000
droSec2
GTAATA----ATAGTATT---------------------------TAATGTTGGGATTGCAAA-------------------------AAAAA-----------------------AAAAAAAACAGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAACCGAAA--CCA------AACA-------CCA-----------CAA------------AAAAAA-----------GAGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................23131618.0031618200677279911913
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22119683.0019683192265236441
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2114722.004722434982110181
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2413677.0036776976272180173
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2411777.001777298389978112
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2211666.0016661551139111
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2011428.001428564250134480
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2111261.0012611257130
.................................................................................................................................................TCACACGATTCTCAAAGGT..........................................................................................................................................................................................................191587.0058727652331
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231383.00383271266620
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201308.00308303131
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................181198.0019881614727
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................251183.0018385394217
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................231179.00179106203914
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................201168.00168167010
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211161.001611117430
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................221130.001309511321
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23199.009996120
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24193.0093470442
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................22191.00912614510
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................21187.00874824141
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23177.007761763
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21168.006859207
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................19164.0064432811
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25160.00601221189
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19153.0053273221
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23153.00532614130
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................25149.00491214221
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................23147.004733293
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................21145.0045167616
................................................................................................................................................CTCACACGATTCTCAAAGGT..........................................................................................................................................................................................................20145.004522374
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................22143.004331435
..................................................................................................................................................CACACGATTCTCAAAGGT..........................................................................................................................................................................................................18141.004150324
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20140.0040280111
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19136.003633120
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................23134.003447230
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24130.003021072
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................24130.003014790
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20128.002819621
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................26127.002713833
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19127.002725020
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19124.002424000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................21122.002222000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24122.002221100
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18120.002020000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22118.001817010
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................22116.001615010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................25113.00134270
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22113.001311011
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................22113.00136250
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................22112.001210200
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................26111.001110100
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................22110.00101171
....................................................................................................................................................................AAATATCAGCTGGTAATTCTTT....................................................................................................................................................................................2218.0087001
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................1818.0088000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2518.0080341
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................2418.0082060
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAT..................................................................................................................................................................................2418.0085120
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2417.0073040
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................2117.0073130
...............................................................................................................................................CCTCACACGATTCTCAAAGGT..........................................................................................................................................................................................................2117.0070070
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2517.0073040
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2217.0077000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................2316.0064110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................2316.0065001
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................1816.0065010
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGA....................................................................................................................................2015.0054010
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................2215.0054100
...................................................................................................................................................................TAAATATCAGCTGGTAATTC.......................................................................................................................................................................................2015.0052201
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2115.0053020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT................................................................................................................................................................................2615.0051121
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................2315.0054100
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................2115.0055000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2015.0051040
.........................................................................................................................................................................................................................ATTTCAGTTGGTATCGAC...................................................................................................................................1814.0040040
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTA................................................................................................................................................................................2614.0042101
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGATT................................................................................................................................................................................2614.0041210
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAC.................................................................................................................................................................................2514.0041021
....................................................................................................................................................................AAATATCAGCTGGTAATTCA......................................................................................................................................................................................2014.0041012
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2114.0040130
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................2014.0042002
...........................................................................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT.........................................................................................................................................................2413.0032010
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2213.0031110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTTT.................................................................................................................................................................................2513.0033000
.....................................................................................................................................................................AATATCAGCTGGTAATTC.......................................................................................................................................................................................1813.0033000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTTC....................................................................................................................................................................................2213.0033000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2113.0033000
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................1813.0031011
droSim2
GTAATA----ATAGTACT---------------------------TAATGTTGGGATTGAAAA-------------------------AAAAA-----------------------AAAAAAAACAGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAACCGAAA--CCA------AACA-------CCA-----------CAA------------AAAA-------------AAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................231236428.00236428161322819677333715293836916511426310495195672022368081
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22111173.001117325640368035443211272423025253421291761629121
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2119897.00989733142312116990311223103051816476158102312001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2414990.004990241228476711194892392775322919100010
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2013817.003817984314101131351656834407162249414232512
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2412801.002801119216370640052754023023624725200000
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................1912092.002092567489694415640191560561055530
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2311831.001831226363157230039534619293171702000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................221839.0083946927100245226391671600000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................241559.00559735921040097897601400000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................211553.00553354281261189191733731000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................241413.0041341426600124169281902300000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................221364.003640014881461514012152687001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231343.00343275412380063532617332000000
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................181342.003424501931563421677027224
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................211264.002640002541052110000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................251250.0025031117001615758532311000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................241244.00244275514120045022600000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................261205.002051064001911677618300000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................251190.001903377193001517777500000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................221168.0016869488600146980000000
.................................................................................................................................................TCACACGATTCTCAAAGGT..........................................................................................................................................................................................................191166.001662014211031000754801000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................201154.00154292545110311130110015000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................211151.0015141021055572055000010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................231127.001277101760026373441300000
....................................................................................................................................................................AAATATCAGCTGGTAAT.........................................................................................................................................................................................171121.001210000001000120000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................191118.001180324003131653600000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................221109.001090002004434743096000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................20193.0093561761011100100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25192.00922118114003108132200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................22192.009240260120012117200000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................24190.00907116810002010000000
....................................................................................................................................................................AAATATCAGCTGGTA...........................................................................................................................................................................................15290.001800000003332169000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................22183.0083242116300611000200000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................21173.0073028200015104221000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23171.00711226003314337000000
............................................................................................................................................................................GCTGGTAATTCTGGG...................................................................................................................................................................................15167.0067000000774148000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................23164.00644419000232120900000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20159.0059001300390628900000
...........................................................................................................................................................................AGCTGGTAATTCTGGG...................................................................................................................................................................................16149.0049000000221737000000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................18146.0046100000440432100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................25146.0046234000279153100000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23145.0045116900146300500000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20141.0041010390000000100000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................23136.00360000001811111103000
..........................................................................................................................................................................CAGCTGGTAATTCTGGG...................................................................................................................................................................................17133.0033000000132126000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATC......................................................................................................................................19131.0031000027121000000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTC.......................................................................................................................................................................................20127.0027681001000011000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................22125.00250001001011200001000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA...............................................................................................................................................................................27124.002400020016591000000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................21122.002290101043000004000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................21121.002100110052741000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................23121.0021431400000000000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19121.002127470000001000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................22116.001603200050222000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAC..................................................................................................................................................................................24116.001652500010300000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................23116.0016101000011000300000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAC.................................................................................................................................................................................25116.001653300010112000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................26116.001656300000002000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAT..................................................................................................................................................................................24115.001577000001000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21114.001413090010000000000
....................................................................................................................................................................AAATATCAGCTGGTAA..........................................................................................................................................................................................16113.0013000000000013000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................24112.001211100035000100000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................23112.001200012035000001000
..................................................................................................................................................CACACGATTCTCAAAGGT..........................................................................................................................................................................................................18112.001201212000005100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAA................................................................................................................................................................................26111.001100000000442100000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23111.001101070001002000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22111.001134000022000000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCC...............................................................................................................................................................................24110.0010001000000000000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19110.001000071200000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................25110.001010100031210100000
................................................................................................................................................CTCACACGATTCTCAAAGGT..........................................................................................................................................................................................................20110.001000000001005400000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................21110.001043200000000100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTAA....................................................................................................................................................................................2219.00900000020520000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTAT.......................................................................................................................................1818.00802003201000000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2518.00812000010020200000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2217.00710400010001000000
...........................................................................................................................................................................AGCTGGTAATTCTGG....................................................................................................................................................................................1517.00700000000007000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAAA..................................................................................................................................2317.00700000020500000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2217.00700070000000000000
...........................................................................................................................................................................AGCTGGTAATTCTGGGT..................................................................................................................................................................................1717.00700000000007000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTC.................................................................................................................................................................................2516.00610300002000000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCTT..............................................................................................................................................................................2516.00611400000000000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................1816.00600040000002000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2116.00620000001201000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTAAA...................................................................................................................................................................................2316.00600000000600000000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGAC...................................................................................................................................2316.00600001012110000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT................................................................................................................................................................................2616.00610000011120000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT................................................................................................................................................................................2616.00612000000201000000
...........................................................................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT.........................................................................................................................................................2415.00501011000001100000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACAA.................................................................................................................................2415.00500000000000014000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGT....................................................................................................................................2114.00401000000000003000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2114.00400200000002000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2214.00412100000000000000
..............................................................................................................................................................................................TAAGCCTAAATA--TGAAACACTCGGAATT..................................................................................................................................................2814.00400000011200000000
...................................................................................................................................................................TAAATATCAGCTGGTAATT........................................................................................................................................................................................1914.00420000000001000001
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................1914.00400040000000000000
.........................................................................................................................................................................TCAGCTGGTAATTCTGG....................................................................................................................................................................................1714.00400000011002000000
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................1814.00400010020001000000
............................................................................................................................................................................GCTGGTAATTCTGGGA..................................................................................................................................................................................1614.00400000000013000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCA......................................................................................................................................................................................2014.00400000010003000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCG...............................................................................................................................................................................2414.00401300000000000000
...........................................................................................................................................................................................AGCTAAGCCTAAATA--TGAAACACTCG.......................................................................................................................................................2614.00400004000000000000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGGT..................................................................................................................................................................................1914.00400000000004000000
........................................................................................................................................................................ATCAGCTGGTAATTCTG.....................................................................................................................................................................................1714.00400000000004000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................2014.00421000000001000000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGGA..................................................................................................................................................................................1914.00410000001002000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................2414.00431000000000000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................2114.00400040000000000000
........................................................................................................................................................................ATCAGCTGGTAATTCT......................................................................................................................................................................................1614.00400000010003000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAA...................................................................................................................................................................................2313.00320000000100000000
dm3
GTAATAG-------TACT---------------------------TAATGTTGAGATTGAAAA-------------------------G----------------------------AAAAAAATAGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCACCATA--A--------------GCGCAACAAAACGAAA--CCA------AACA-------CCA-----------CAA------------AAA--------------AGASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................231453008.004530084010556735187563111750094841465102550372253485068103307105052641435214437620226551129151051472938707129669633587472011000000000000000009301061693109216010420423361943624138453282366701075217839845541121498973022713733134120301654251751165171705152021622538591752782054545293903005113818118974441132496472376711666016134655153610877563336217191764057805051135623958324537940569350837381212314669602401267279294159224126102952819301671461681153156329038100565441272148622109183641510557392814475934178164333080624674496011271123390832006244291535152157910423137314341970412283913236797678149089212489187175118446279251465127234410963515853263327534514459967593815985193062602791725962431967276306110125119251847242410611691616197233912928981091028109100257199945221326376283164994820272685641661494287709872893442561707725925047741095135482796136542
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................221142314.00142314000001020210320021005402601119136127934851322583921279208328359551963366437173660046100000000000000000372412278427080911556870511321371555581711232212678115439489355812002123111489622316212819154619215226526641245455612391942209128848229852484819290701869743051282314214721616045330232664577933816455127808127016188072758175324541212219323447284130282601100011311148149361421289551541703321633137307915107671449743271511014207310072510147144452364910528123739272578132777333371631323215696625148534522720740129232075444121514818473692591161112101101772311263664013514601755912400360012714923010231108212758411486313136275456562454705969280
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................24141705.00417050000000001000000000079100010000000312293291772512018114410332593690231300020100000000000000000131571106044105000001211002100053245600000201301141700001000234568091081204658321231051257410572721074114001160040016190110041306021029200070124227214910123370181752023821060020203523121933904522282331766290593256671267092019121190095490196100427913879301173843396230677288122743178150328918186283359140295094330141377816339711590773395531579072491243536544035610309385509522718953079418052398621115211137916897861586340160642835512018312145439213211710413167932527919410712992313355
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................24137343.003734300000001000101001000693000000000000113394146451291182678225337892914000000000000000000000001527172300045102400313114200350017663108001032031030203010200100051113306243421826105701067012956496065037012107100181401210919217122925200030158641352520020160131311024504601000047177294640432427973516969467165146165811322498210068320211124585915615713740175531089103440975352156042417211934541734719944720629411672915945814929612275845282441407261011162531271654518312337124176599902973724040221498634747812659771741374177303576452542656061815950278170139304215359964061116
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................20135092.003509200000300010210000000515270012211000001651324831142102817241672276118252215201200000000000000000016216911017119228821552016412416331081658422244314111710021320355110705390501012101631000032812322981553312531216383334610152212042501892850861254753533224441010000140129135917319100109148245306571900000043991306100112157220324449147214128276250054010011401104629826796274311931071876471263335583012468919674422233724461910937561548696111016294963274134104646265212252701481491581101882192440503315946702472510695976859106269719520131416314746732319414831368196118381311039213851962503449613
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................21134517.00345170000000000021010000075011803229105619124864420424224101019653193835748456832220220000000000000000000001251491171851520102222070011620001037214152717100110291113062129348632415160141601149371648401166201818133148957353899394532204022532111103021669166303165132145283592071164685112211203813346020222022114023032553565329112400000061321671694186157078222513851166412381277196790611451000352505526922774646119105111136485363332651693812991415731631218054566181643486513679844936527969561542839514057137505323208434321452452224019381161040122137360665673212158964784714093419899508315714911461480
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19115516.001551600000000000000000000010000200000000000000010021011001000000000000000000000005105400000000011000000110110100600000000001000000000000001000200020100311447510020000000000010000000000000000010013201000000000000100000031024252132303001200000230101200212241125401003112283062000250442023056300011111106013100101320661342000102000002111023015161
.................................................................................................................................................TCACACGATTCTCAAAGGT..........................................................................................................................................................................................................1917903.0079030000000000000000000010181400000000010024731840304251281051024124049123308000101000000000000000001131017761421249711012524120042000118153641201282480000001000200100000000003363210552175445025812062632500000800100130000000001000025000292845201003009170000041002430061344674316944204756291431208300300000755361924534102120116228386252915202435830735510851492121621226411351320272646142544511199415033539812084191527133713419818334422141041591721091615142719954743233140
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................2217302.007302000001044300100072000303400000000001343022819212941173111200015700000000000000000012191213155096822632103292161820001419172038648143324125290310101020101100100020400020041211118212413161001002050008100400061403070080001611100002111040202480000507138424723117517453598197488237157449810001030100516346033222944313219377169206430264153311665225974530342577237717368799763413629741573147367184169198992701817195723328341723181423181735936
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGATC..................................................................................................................................................................................2417103.007103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055831520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2315081.0050810000000000000000000043120020000000012441341125236315557101929815000000000000000000000002505015540060030011010011000001610000000133020113020210000102310191100223111017438356000010100018100120024020611203002061533520020901000271100000061115331024482452101532215647434451300135011510420453246211332014830913408174219263711263306811252254615238411277751237133829512327221442233410416542561918121381348131257917646281171234499481190
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.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................2114283.0042830000000010100200010010060000000000128343201232644847552855601250000000000000000001326715013412184555712022649130489641391297152016231213009000011010120000000100010700658487108500000001500643022103120426300060153147000102400000326005000211812843174267669653779351022700000403141100300214271246111135028114821017364903494994816811449772184431351415813544513327107789121933259100130161177812119175454151913272142251712241601021710
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.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................2011729.00172900000000010000000000010300001000006010020020110200142210032000000000000000000481103010623312010011220000001073776121022001000000000010000000000001000030110000000000025800020000012211230010302632000010405000000000000533120030127721202761814921100000001141321000022172031051662001079131001283123162170262521110114002351122731811711240111601411522501716242934224433238000
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...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................241995.009950000000000000000000000000000000000002220001000110212000000000000000000000000011000000200100100001000000000000000000001101010100011000000031000000122113000000100000000120300150000032000000104300000100010200000000100325006342289746433858500700002000073234319119211386080035331514407100170121121102101030103013014011200050222085242206010050015024499100
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.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................211942.009420000000100000000000000000000023810000001001000000201000000000000000000000000210100000000000000000000100000602000000102010015000000101000442200000001020000010010001001011021081124015162000001100000000000000000000000000012011043413013395698395531700000000003010000270410100001001000000000001000000000000000000100000021000000000000100000010102010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................251875.00875000001000000000000000000000000000000000000000010101010000000000000000000000000010000000000000000000000000070000010000000000000010000000000001100000005204000000000000220000301002311000000040300000020200002000000010031203272016262320182115001301000000114305730812322014403106301141412628100040101002062621100113117034260311110113169121660965112104303410017250
................................................................................................................................................CTCACACGATTCTCAAAGGT..........................................................................................................................................................................................................201819.00819000000000000000000000111000000000000300204102019036251201000000000000000000000000007045006101000010000000110401013000000000000000000000000000506001657785280000000000000000000000000300000002210000001000000000000000014164532472517611940010000840212700002063011403001756152913280000000000022926200021112013012340101101100161117101416262229313033201110331320
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................251745.0074500000000000000000000000000000000000010000240013111100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000610201121111000000000000023010001010001000000020110000030000000300000010021017128712131416163004362100020007722237371803211002294508732711122030914021813022166321502531004510201715132622996428651183366830139227
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................241645.006450000000000000000000000000000000000001000051710012756010000000000000000000000012210000000000000001000020001010000000000001010000000011010103000200200112204400000000000100200000010010000000100000000021300101000000000541221719152119161000011730021000618112111185013923001111124428100229070170400110120005170000115541811030414982112004040121021132446102
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................241524.005240000000000000000000000000000000000000010011500051151100000000000000000000000002011000100020000000000000000000000000000000000000000000000000000200011020000000000010000031020001000041000000000000000000000000000000000028006149457171130000100203635301072111220702124003610600021105280526463151030232072241801000000146931750211730101220111200260
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..................................................................................................................................................CACACGATTCTCAAAGGT..........................................................................................................................................................................................................181351.003510000000000000000000003000000000000002010100100210001100010000000000000000000000001039105001000001000000000100401000000000000000000000000000050400113225000000000000000000000000000000000000022000000200000000000000300201412310100100010000860201102100091051012011331022861520011020000031910000033301110110001001001449002000000000100000337100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................231333.00333000000000000000000000000000000000000431210210530101320000000000000000000000001100100000100100000000000000000000000001000000000000000000000001100205053011100000000000010000010000000000000001000110000000011000000000000000000011700400000007143233051431933604306412148104120410000000020000000100000100000000000200000000000000000003010
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....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................221295.0029500000000000000000000000000000000000000000000000000000010011000000000000000001217121700000006000100000000000011141000000000000000000000000000005001000000000100000000000000100000000000000000100000000000200000000000000200001012512922515730050000000001000000000010000000000010000213480803000000000100002242120201001910012312001000111141400000
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.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................231286.00286000000000000000000001001000000000000001001100000002200000000000000000000000000010501101000100011000004000100001100100000000000000000000000000000130110200000000100000000000000001000020000000000000000000001000000000200037222162662911600621000000000000000102100000200010000000030124110010000001101201535030000108003221162101121001201000
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.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................231234.0023400000000000000000000010000000000000130000030011121211000000000000000000000001001000000010000000100000000000000000000100000000000000000000000000000131002000010000000000000000000000000000000100000010000000000000000026115812497500000000000102110000043130000052001100110052163403104110001221140121603400001429412102400220000202214010
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....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................241210.002100000000000000000000000000000000000000000040000310121100000000000000000000000000000000010101000000000000000000000000010000000000000000000000000003111021001000000000001101000100010000000000000000000000000020000001000200021201211001000000000670260011802418034080220030041000000010003331100000001010101100000000000000200000000001014010
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................221207.002070000000000000000000000000000000000010000014100010231000000000000000000000000221001044810500100014100020071000201002100000000100001000000000000000000000000000000000000010000010000000000000000000000000000000000000300000091958343000110000100000100000032200000000000000000000000001020000000000412224020102013011200201010021000701000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................181205.0020500000000000000000010200000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000010000000000000000001000000000000000000000000012111001000000000000000000001000020000000020000100000016010101001010000000000010000003000100000000000000000000210163
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................201201.0020100000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000011000000000000000000002000000002000000000010031300000001200000005000000000010200170
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.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGT....................................................................................................................................211186.00186000000000000000000000000000000000002000000000000000000700000000000000000000000100000000100000000000000000040000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000012101000000000001000051000000002000100181001410000003412010030000001100110060616100005011916115110512021203031120
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................231182.00182000000000000000000000000000000000000000000001010000000000000000000000000000002000000000000000100000000000010300000000100000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000100210113514562000000000010003100012053000030011101300000012010020522700000000001128050110010011248020300000000011718121
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................201179.001790000000000000000000000000000000000001011001000100000000000000000000000000000322000000005000000011000000002000010000000000000000000020000200000000012100000000000000000000000000000000000100200000000300000000000000002211110110100100000000000230011003101010001100020020006900120102000000000000010100200410020300001200001001000001170
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGCT...................................................................................................................................................................................231153.001530000000000000100000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040400000000000000002100000000000000000000000000000000000000000000000000000000000000000000000661053330151321401202001044102100020004000110100002000100200000070000000000000000000000001000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................211146.001460000000000000000000001000000000000000000010000111010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000010000000000010000000000000000000000001000618843710002000010000010000000021102004300030110000215022000002100063001013250010000412133211021000000001331000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................211143.001430000000000000000000000000000000000000001000000001010003201000000000000000000016250000000100000000010000000231100000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000010081644256900200000000000000000000000000000000000000011101030010100000000200113000000033020400000001010100001000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAT...................................................................................................................................................................................231127.0012700000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100001000000000010000000000000000000000000000000000000000000000000000000000000000000000100110000009522000000001000000010000100000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................221125.00125000000000000000000000000000000000001000210001000012100000000000000000000000010010000000000000000000100000000000010000000000000000000000000000000021103100000000000000000000000000000000000105000000300000000000000000042235223614100000000000001000001110010110210007111111120204210001000002001001014011100000021210011000000000201010
...........................................................................................................................................................................................AGCTAAGCCTAAATA--TGAAACACT.........................................................................................................................................................241122.001220000020001000000000000000000100000000000001010000000000000000000000000000000120005012009101101320001741003205400100000000000000000000000000000000131200020000000000000000000010011000000004000000000000000010000000000000000000000000000000000002000000000210000100001010000010004011000000000000001500000000000000000000000001000101000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................211120.0012000000000000000000000000300000000000000000010000001001000000000000000000000000000000001000000000000000000000000000000100000000000000000000001100000100000000000000000021020002010100000000211100000020000001100000000000102423371400001000000010000101000000000000100100000031313612040000000000000010101000121013010000000001001002000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTC.......................................................................................................................................................................................201111.001110000000000000000000000010000000000000000000000000100000000000000000000000000200000000001000000001000000000100000000000000000000000000000000000000200010000000000000000000000000020100000002000000501000000000000000000000101225150000000000010220120100701202001010130020000111040101101000000000000000000000004020100200010000000019130
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................24198.0098000000000000000000000000000000000001010000200100100000000000000000000000000000100200000000000000000000000010000000000000000000000000000000000000001103010000100000000000100000000000000000002000010000000000000000000130211029615000000000000000000000111100000100001103000022000230000000000000000216140002111020110020000000000101000
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19198.00980000000000000000000000000000000000000010000000000000000000000000000000000000100200000002001000001000020000301100000010000000000000001000000000001000020002000000001002502002000020400000111100000000000000300000000000011145210220000000000000020001000100002001000100001000001000000100012000000000000000000003000000100000000110012000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................26192.0092000000000000000000000010000000000000000001100000000000000010000000000000000005120000000000000000000000000000000000000000000000000020020400200000002010000000000000000000000000000004000000001000000000000700000000000010110101960000000000001000000000000000000000001000000000000000000010003000000213020000911110000001000001300201000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................26186.00860000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000020000000000000000500000100010400000001010000000000000000000000000100210252221001000000000140000001000004021200210020001200010001100000000003000000010000002100000010000000001111120
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA...............................................................................................................................................................................27186.00860000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000010040120001000000000000000000000000000000000000000000000000000070000000000000100053680000000000000000000000000000000100002000000212010000000000010000020270100000317010000000000000000000010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT................................................................................................................................................................................26183.0083000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004300010000000000000000000000000000000000000000000000000200000032000000000021002032212000010001000000000000020100000100010000000000000000031000004000010011000000037110201050110101113001040
...............................................................................................................................................CCTCACACGATTCTCAAAGGT..........................................................................................................................................................................................................21179.0079000000000000000000000000000000000000000000200000010100000000000000000000000000000000400200000000000020000010000200000000000100000000000000000100000000100200000000000000000000000000000000000000000000000000000000000110052423212000000000100002000000100200101221001001000000000000020100001000001210000000013111210000000000000102000
....................................................................................................................................................................AAATATCAGCTGGTAAT.........................................................................................................................................................................................17179.007900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000257495018202300002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGCT..................................................................................................................................................................................24176.007600000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000202001200000000000000010210010010305001110021010000600150101101000000000011100000000000001000000000000000012010
...................................................................................................................................................................TAAATATCAGCTGGTAATT........................................................................................................................................................................................19175.00750000000000000000000000000000000000000000000000000020000000000000000000000000100000000000000000000000100000100000010000000000010000000000000000000010000000000000000000001000000000000000000110000101000000000000002000100000100000000000000000100000001302100001020140000000000000001201100000000010001100000012001000200000003111317110
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................23174.00740000000100000000000000000000000000000000000000000000000011000000000000000000100000000001001000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000050141311200200000000000000000000000010100000101000010001000020010003001400201011003001000200011101010000301000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAT..................................................................................................................................................................................24174.007400000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000001000000000000000000000000000000000000000000000000001223000300001311000000011001100050100100110020001000000000000010000000100001000000100010000200030100000000105010
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....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................19168.00680000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000500000100000000000000000000000000000000000000000000010000000000000000001300002001401003010210223010000000000001100002000000010000000000011000000000000200001014060
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGCC...................................................................................................................................................................................23167.006700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100011100000000000010000000000000000000000000000000000000000000000000010000000000000000000000200101000041120001000000000000000000000000000000000001000010010000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................25167.0067000000000000000000000010000000000000000000000010000000000000000000000000000010300000000000000000000000000000000000000000000000000000000006001000002020030000000000000000000000000010000000100002000001000010000000000100021322001000000000000000100000120000200001101002000001000000001000000100001000010000310220100001000001000002000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20167.00670000000000000000000000000000001110000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000100000010000000000200000101000000000000000000000000000000000000000001401581336110100001000000000000110100000000000001000010000000100001000100001000000010000000000000000000001000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTTCT...................................................................................................................................................................................23165.0065000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012304300120161101103100021000000100000010001000000000000000000010000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTC...................................................................................................................................................................................23164.00640000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000110120001000000000002000000000000000000000000000000000000000000000000000000000000000000000030300000020001851601001114000000010002000010010000200000000000000000000000000001000000000000
droEug1
A-G----------------------------------TAAGA---------------------------------------------------GTT-------------------TG--AGAGAGAGAGAAAAGTGTC---CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCA-AAAA--------------GCGCAA-AAACCGAAA--CCA-----AAACA-------CC---------------------TAA---A----------------ACCSizeHit CountTotal NormTotal
No Reads
droBia1
GTTAGAG---------------------------------------------------------------------------------------CT-------------------TA--AGAGAGAGAGAAAAGTGC----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAC-ACCCGAAA--CTA------AACA-------CCA-----------CA---------A---A----------------AAASizeHit CountTotal NormTotal
No Reads
droTak1
GTAAGAGAT----------------------------TAAGAGTTTAAG----------G--------------------------------------------------------------AAGAGAGAAAAGTGTC---CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-AAAA--------------GCGCAA-AAACCGAAA--CCA------AACA-------CG------------CAA--A-ACTAA---A----------------AACSizeHit CountTotal NormTotal
No Reads
droEle1
TAGATA----A---GAATGA--GTGC----------------------TGGAGGGAAAGTAAT-------------------------AGGAT----------------------TA--AGAGAGGGAGAAAAGTGT----CACATCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCAAA--A--------------GCGCAA-AAACTGAAA--CCA------AACA-------CCA-----------AC-------CAA---A----------------ACTSizeHit CountTotal NormTotal
No Reads
droRho1
GCGAGAGTG----------A--GTGCTAGAGGGAAAGTAAGA---------------------------------------------------GTTTA-------------------------AAGGAGAAAAGTGT----CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAA-AAACCGAAA--CCA------AACA-------CCA-----------AA-------AAA---A---AA-----------CTTSizeHit CountTotal NormTotal
No Reads
droFic1
GCAAGAA--------------------------------------------------------------------------------------G---------------------TAAGAAAGAGAGAGAAAAGTGT----CACCTCACAGGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAA-AAACCGAAAACCCA------AACA-------CAA-----------AA-------TAA---A----ACCCCAACGCAAAATSizeHit CountTotal NormTotal
No Reads
droKik1
GCGAAAG-------TGA-----------------------GA---------------------------------------------------GATTAGCA---------------------AAGA---ACCAGTGTC-ACCTCCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCGTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCA-AGAA-----------------AAA-------------------AAAACA---------AACTAAAACTT------A-AACCAAAAA----------------CACSizeHit CountTotal NormTotal
No Reads
droAna3
---------------------------------------------------------------------------------------------------------------------------------------------CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTCGAATTGCATTTTATCACCA-AAAACTACCTAAAAAAAGCCGCAA---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22114194.00141941243016583215950
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................23111215.00112158882153527532152339
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2117203.0072036767199611530131
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2012031.002031141395217874350
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................211837.0083783420001
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................221664.0066465620024
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................241496.004963037615275322
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201423.0042342200001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................241363.003631381281366216
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................221201.002011714231011
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................191148.0014845980104
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231100.0010065666611
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................23183.00832933100110
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20174.007462111000
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19174.00747400000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21163.00635205033
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................21161.00614746031
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................24153.005326260100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................25148.00483750132
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................25148.00483420030
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................21148.00483450090
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22143.004316270000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................22143.004321130072
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19129.00291198010
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23128.00282600110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22125.00251680010
...........................................................................................................................................................................................AGCTATGCCTGATTA--TGAAACACT.........................................................................................................................................................24125.002512101011
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................18124.00241030083
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19124.00242400000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20121.00211600041
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................23121.002111100000
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18118.00181620000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20116.00161301020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................23115.00151400100
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19115.00151230000
.................................................................................................................................................TCACCTGATTCTTAAAGGT..........................................................................................................................................................................................................19114.0014622202
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................26114.00142120000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................21113.0013922000
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................20113.00130130000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25112.0012540210
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23111.00111010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24111.00111000100
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23110.00101000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................1819.009900000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2518.008071000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................2618.008501011
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................2118.008800000
....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................1917.007400111
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2416.006600000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................2315.005050000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2215.005500000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................2315.005400010
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................1815.005410000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTTT..................................................................................................................................................................................2414.004400000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT................................................................................................................................................................................2614.004022000
...............................................................................................................................................CCTCACCTGATTCTTAAAGGT..........................................................................................................................................................................................................2113.003111000
...........................................................................................................................................................................................AGCTATGCCTGATTA--TGAAACAC..........................................................................................................................................................2313.003210000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGA....................................................................................................................................2013.003300000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................2113.003300000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................2213.003300000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTT.....................................................................................................................................................................................2013.003300000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................2213.003210000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................2213.003300000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT................................................................................................................................................................................2613.003100002
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2213.003300000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2212.002200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................2412.002110000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAA................................................................................................................................................................................2612.002020000
....................................................................................................................................................................AAATATCAGCTGGTAATTCG......................................................................................................................................................................................2012.002010100
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................2312.002200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGCT...................................................................................................................................................................................2312.002001100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTAT....................................................................................................................................................................................2212.002200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAC.................................................................................................................................................................................2512.002200000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................2412.002200000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2212.002010001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................2112.002010100
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................2112.002200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAT..................................................................................................................................................................................2412.002100010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTTT....................................................................................................................................................................................2212.002200000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGC....................................................................................................................................2112.002200000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGGA..................................................................................................................................................................................1912.002110000
...........................................................................................................................................................................................AGCTATGCCTGATTA--TGAAACA...........................................................................................................................................................2212.002200000
droBip1
----------------------------------------------------------------------------------------------------------------------------------AAAGTGTTCACCACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTCTGAATTGCATTTTATCACCA-AAAA-------------------A--------AA--TTA------AATA-------T--------------A---------A---A----------------AAASizeHit CountTotal NormTotal
No Reads
dp5
GAAAGAGAGA------------GAG--AGA----------------------------------------------GCGAACGAGAGA-----GAGTGCCAGAGAAAGCGACGTC---------------ACGA--TT---CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAA-GA----A-----A------AACA-------CAA-----------C-------------------------------AATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22144277.004427725339343960366149102324553142213
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................23137589.0037589562283582821703601891381237936245
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................21117234.0017234140140044549626512544591595155
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2112599.00259902566711001491
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2012208.002208317626461636311412615
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2411915.0019151295031421183278016315015
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2211848.00184811806701410991
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2011015.0010150100820001031
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................241660.006606286173554153862192
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231572.005722432741621674100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................221534.00534428174423321934
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................191311.00311156519525530120
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................231240.00240399372145243350
...............................................................................................................................................CCTCA--CGATTCTCAAAGGT..........................................................................................................................................................................................................191231.0023109720011301000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................221179.00179093413411011115
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................231157.001570271215400000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................201136.00136013510000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................241125.00125121916310110
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211120.00120011230500000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................211116.00116065291307470
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................25198.009865310120310130
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19193.009309300000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18191.009108730100000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19180.0080048302801000
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19174.007407400000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22173.00732331220008160
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23166.006606310000020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22161.006114512000030
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23156.005614540201210
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20154.005404620600000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19150.005004721000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23141.004104010000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................23137.003700361000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21135.003502301202160
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24130.003002440000200
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................25128.002801650101320
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................21127.002702600000010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................23124.002401500102060
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................22123.002301910000210
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24121.002101820100000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20120.002001621000100
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................20119.001900145000000
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................18119.00190911332000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................22118.001801700001000
................................................................................................................................................CTCA--CGATTCTCAAAGGT..........................................................................................................................................................................................................18117.001701510010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24117.00170830000141
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................18116.001601600000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................21116.001601210000030
...........................................................................................................................................................................................AGCTAAGC-AAGATA--TGAAACACT.........................................................................................................................................................23114.00140931100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................26114.001411210000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................23113.00130580000000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................21113.00130700000330
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................18113.001301200000010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................26113.001301020000100
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................23111.00110740000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................22111.001101000000010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAA...................................................................................................................................................................................2319.0090010000170
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................1819.0090900000000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................2119.0090900000000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2218.0080800000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................2517.0070430000000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGA....................................................................................................................................2017.0070700000000
....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................1917.0070520000000
...............................................................................................................................................CCTCA--CGATTCTCAAAGGC..........................................................................................................................................................................................................1926.001200110010000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................2116.0060600000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................2316.0060330000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................2116.0060150000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAC..................................................................................................................................................................................2415.0051040000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2515.0050410000000
..............................................................................................................................................ACCTCA--CGATTCTCAAAGGT..........................................................................................................................................................................................................2015.0050210200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................2614.0040010000120
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTTT..................................................................................................................................................................................2414.0041200000010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGCT...................................................................................................................................................................................2314.0040000310000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAC.................................................................................................................................................................................2514.0040100000300
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTC.................................................................................................................................................................................2514.0040121000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2213.0030300000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGATT.................................................................................................................................................................................2513.0030000000030
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................2313.0030210000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT................................................................................................................................................................................2613.0030120000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................2213.0030210000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2213.0030300000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................2413.0030210000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTC...................................................................................................................................................................................2313.0030000200010
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................2313.0030300000000
.....................................................................................................................................................................AATATCAGCTGGTAATTC.......................................................................................................................................................................................1812.0020200000000
droPer2
GAGAGAGAGA--------GAGAGAGAG------------------------AG------AGAGAGAGAGAGAGAGAGCGAACGAGAGA-----GAGTGCCAGAGAAAGCGACGTC---------------ACGA--TT---CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGC-AAGATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAA-GA----A-----A------AACA-------CAA-----------C-------------------------------AATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2215303.0053031435100331098
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2314828.0048289002959818595141
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2113256.00325672924117591517
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................201577.005770343224810856
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................211354.0035403540000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................241306.003069412827151923
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................221222.0022212173001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................241176.0017656521971428
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................191164.0016415190211
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201149.0014901481000
...............................................................................................................................................CCTCA--CGATTCTCAAAGGT..........................................................................................................................................................................................................19192.009212656171
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................23187.008719548402
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................23180.008051215021
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................22168.00685542223
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................24136.00363321000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................22131.00310152239
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22127.002712141000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................21125.002501100014
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20123.00230230000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24122.00222011000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................21121.00213171000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19121.00214611000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20117.0017941012
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19116.00166100000
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19114.00140140000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22113.00132110000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................23113.0013661000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................25112.0012271101
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................18112.0012830100
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20112.0012056100
...........................................................................................................................................................................................AGCTAAGC-AAGATA--TGAAACACT.........................................................................................................................................................23110.0010612010
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2419.009081000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................2118.008080000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2318.008070001
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2318.008240110
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................1818.008032102
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................1816.006051000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................1916.006060000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................2416.006040020
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................2216.006050001
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................2114.004040000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2314.004040000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAC..................................................................................................................................................................................2414.004130000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................2514.004040000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................2614.004040000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................2113.003020100
..............................................................................................................................................ACCTCA--CGATTCTCAAAGGT..........................................................................................................................................................................................................2013.003021000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................2313.003021000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................2513.003120000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2513.003120000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2213.003030000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................2112.002020000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2212.002020000
................................................................................................................................................CTCA--CGATTCTCAAAGGT..........................................................................................................................................................................................................1812.002020000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCC...............................................................................................................................................................................2412.002200000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2112.002200000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................1812.002020000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................2312.002200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................2612.002110000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2211.001010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTC.................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2011.001010000
....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGT....................................................................................................................................2211.001010000
...........................................................................................................................................................................................AGCTAAGC-AAGATA--TGAAACACC.........................................................................................................................................................2311.001100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCG......................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................GAATTTCAGTTGGTATCGAA...................................................................................................................................2011.001000001
....................................................................................................................................................................AAATATCAGCTGGTAATTGG......................................................................................................................................................................................2011.001010000
...................................................................................................................................................................TAAATATCAGCTGGTAATTC.......................................................................................................................................................................................2011.001010000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................2011.001100000
...............................................................................................................................................CCTCA--CGATTCTCAAAGGTTC........................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTAA....................................................................................................................................................................................2211.001010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTTT..................................................................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................ATTTCAGTTGGTATCGACA..................................................................................................................................1911.001100000
...............................................................................................................................................CCTCA--CGATTCTCAAAGGG..........................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA...............................................................................................................................................................................2711.001010000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................2311.001010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................2611.001100000
...............................................................................................................................................CCTCA--CGATTCTCAAAGG...........................................................................................................................................................................................................1811.001010000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................2411.001010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAC.................................................................................................................................................................................2511.001010000
droWil2
GAGTGG--------GAATGA--GTGCGA----------------------GTG------GGA------------------------------------------------------------------------GGG----AGCCTAACG-AATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATATTTGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCACCA-AAAA----------------AAA--------------------AAAACA-------AAA-----------AA-ATCAATCAA---A----------------AACSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................23138120.003812020191284587221011068
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22112828.0012828241119531955461
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2116394.0063941211432320673167
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2011551.0015513586465355232
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2411190.0011901463873058938
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2411182.0011821621625775150
................................................................................................................................................CTAACG-AATTCTCAAAGGT..........................................................................................................................................................................................................1911096.0010961764410056
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2211006.00100629400595
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................211785.007850784010
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................191382.0038235129110
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................181304.003044512859
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201273.002733266031
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................231258.00258113660709
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231202.002021611584914
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211100.001001741240
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................22190.00900325512
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20188.0088088000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................22186.00861765130
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................19170.00700491191
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24157.0057406173
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................25154.005414241132
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19149.0049048001
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................21149.00491267141
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................24147.0047338051
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................25141.00413111260
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................23140.00408140171
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18138.0038038000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24137.00373210112
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................20137.0037130150
.................................................................................................................................................TAACG-AATTCTCAAAGGT..........................................................................................................................................................................................................18134.0034060280
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19132.0032131000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23125.0025124000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22121.0021118020
...............................................................................................................................................CCTAACG-AATTCTCAAAGGT..........................................................................................................................................................................................................20120.0020011180
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19118.0018018000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23118.0018015030
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................20115.001577010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................21115.0015030111
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................23114.001456030
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25114.001454221
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21113.001318022
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24112.0012010020
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................22111.001174000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................18110.0010010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................2318.00835000
................................................................................................................................................CTAACG-AATTCTCAAAGG...........................................................................................................................................................................................................1818.00801070
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................2117.00701024
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2517.00714020
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................1816.00605010
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................1816.00605010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................2216.00651000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2215.00505000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................2115.00505000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................2115.00501040
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................2615.00502030
...........................................................................................................................................................................................AGCTATGCCTAGATATTTGAAACACT.........................................................................................................................................................2615.00505000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGCT...............................................................................................................................................................................2414.00440000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................2614.00400040
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................2314.00400040
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTTT.................................................................................................................................................................................2514.00404000
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2514.00422000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................2314.00413000
................................................................................................................................................CTAACG-AATTCTCAAAGGG..........................................................................................................................................................................................................1913.00310020
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................2213.00301020
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................2113.00303000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................2313.00303000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................2313.00301020
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2213.00303000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................2113.00300012
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2013.00310020
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2213.00302100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT................................................................................................................................................................................2612.00220000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTCT................................................................................................................................................................................2612.00220000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGACT..................................................................................................................................2212.00202000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAT..................................................................................................................................................................................2412.00201010
.........................................................................................................................................................................................................................ATTTCAGTTGGTATCGAC...................................................................................................................................1812.00200020
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGA....................................................................................................................................2012.00202000
.....................................................................................................................................................................AATATCAGCTGGTAATTC.......................................................................................................................................................................................1812.00211000
.............................................................................................................................................................................................................GAAACACTCGGAATTTCAGTTGGT.........................................................................................................................................2412.00200200
....................................................................................................................................................................AAATATCAGCTGGTAATTCA......................................................................................................................................................................................2012.00202000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................2312.00220000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................2212.00201001
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2212.00202000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAA...............................................................................................................................................................................2712.00202000
................................................................................................................................................CTAACG-AATTCTCAAAGGC..........................................................................................................................................................................................................1912.00200020
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2112.00202000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................2211.00101000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................2011.00110000
droVir3
GAGAAAG-------TAC-----------------------------------------------------------------------------------------------------------------AAGATGT----CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA----A--------------GCGCAAA-AA----A-----A------AATA-------ACA-----------GA---------A---G----------------AATSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................231136788.00136788894200145577582583153138921138845037204137471647095149924835993469365363293914445324181656325363182667048454842753552334283465101180167113174125293329772952892435892716410959156611101257911297855665891326111292764447530810923
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22130695.0030695124311322027141316727631983224151971658713511718519433522132420513825371315751224150100000014332344482172523691085102698589685249159548039660856462939854211061379
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................21117347.001734737016930901421412115547285405143331833191715285329182177370240535348221432142516612111236000001121223111543192532901003001951779916401635138410651765156682364499134
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................24112704.00127041594037333020464854926081139534252412260526947231146194367280241108831459756619192741748137653127142012193124212326121521051623536781421428545832805511553862883382113163387433
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2016967.00696716491436577237461840036343326650388283891231601432952155014743095541810316182211862770010100100110001473145714903921921551459410098631111121055441147173
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2415251.005251989280245118354527133522726820018159238934125915513915223520125415110117636122151191100001120037108312931353108911118528721132711811563451221042414333133
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................2514646.0046462130352171301126829710100120535335511795281097129274124119785053943420122112210023708026134934684281982201101271471922718292258312
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................1914024.004024109474412762001200003210210159103981625173436222241600100210341162844385421206119282665466943743165940616541214
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................2612251.0022511048809011038401110000001013245287761122850738576403210000001000000000000304017829727418831176101491335663157208
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2311731.00173155236937821200001082231000136161740294716142374067231110000011030101303694612317465029168158143132189182196112428
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................2311513.0015139013351117861354529000191831244141130172929863180754470211132111190000000010010031115353116352142058505553697441031
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2211501.0015011011466510100000000010010141522232935891902010041000000000000000000020357372022168496500013
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................2211355.00135500422217413317000000100150211101133178020367304011181000213912201110271425212313712010821722131846458421261581696669
.................................................................................................................................................TCACCCGATTCTCAAAGGT..........................................................................................................................................................................................................1911120.001120002226038729411200010220028111324252515169616212816002406758000000000000000000151200800003004100000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2111045.00104500100650000001000000000000013210212000010010000000000000000000100010120200000010011
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................241804.0080416031872311311000000000000074464267600000030011114417132122142121331613330200003233351612405040005
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................221798.00798731260000001000000000000210321221000020000101000000000001202000042322126135838417112920111
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................211441.004410012128222210821001100001108751114391521310100011270000020130330000003506011685121916717933681011
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................221435.004354346003010160000141322235131961528122903101017000000001000000200151302344228403621302421138
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................201294.002940032510100000000000003002836332580000002100000000000000010000001920200014023310000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................211283.002832631030200010000000000101221111821111910000002000000000010020005100000100016172419323900000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201246.00246002240000301000001000000000020031200000000000000000000000000000001010221001100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................251205.0020526228151416710000110301114355568106803000023000000020120010132630300800110100200100
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................181194.0019410100634432300001021010095585231313600223025000000000000000000040130211310000000000000
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................191191.00191006553200000000100000000025628151010000210000000000000000000600671300022000000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211161.0016101671510000000000000000000710671032300101001000000000000000010080080001100200210200
................................................................................................................................................CTCACCCGATTCTCAAAGGT..........................................................................................................................................................................................................201159.00159003151013202000000000030110851122376130300001011000000000000000000010300400010001000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTC..................................................................................................................................................................................241154.001541010304100100000000001022114123201022020000020000000000000000011001110400013439500000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................251150.001506187201022010111010001131710210125120103510000100000000000001118000152310237532032
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................211142.00142002011000000100000000004812101053108243511100000000000000000000000081273100300241711
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................201142.001421201114013001000001030001212295404000013000110001100110000000200400016224179900000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAT................................................................................................................................................................................261123.00123000100001000400000000000111200003020231000000000100000000001000001922142030206421015
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................241118.001182983510101010000000000001011400010000001100000000000001000011000011211163221211139
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................231117.0011750292111232100000000100032020412212000051000000000000000000000115301192345421011
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................231105.00105011264201000000000110010000020201000000000000000000000000000120101000700101110010
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................20187.0087007113000000000000000000000000100000000000000000000000000000020000000000000000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACA..................................................................................................................................23186.00860024100010000000000000000100311100000011000000222122010000000001025400000027101313
....................................................................................................................................................................AAATATCAGCTGGTAATTCTCC....................................................................................................................................................................................22183.00831010000000000000000000001001099710010000010000000000000000000000010000310843400000
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19177.007700550110000000010000000011203112302000011000000000000000000000000000000000000001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................25176.00762011000001000000000020131352336302111110000100000021111000301000012230218010001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTAA....................................................................................................................................................................................22173.007300010000000001000000000121311002401352200000000000000000000100000157300000012347
..................................................................................................................................................CACCCGATTCTCAAAGGT..........................................................................................................................................................................................................18173.007300103021041000000000101423666104408000023000000000000000000000000000001000000000
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................18167.0067001903000000000000000000040020012021000000000000000000000000000271300000020000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTC.................................................................................................................................................................................25162.006212340100000000000000010011120551601000002000000000011000000010130000021002300100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAA................................................................................................................................................................................26160.00600000000000000300000010001214400150545301000000000000000000010100134400000120021
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24158.0058001020000000000000010000002214404000000000000000000010000000200000000513111200020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................25155.00550001000100000000000000002003020020220100000000000000000000000000194410100042247
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18148.004800441000000100000000000000000000000000000000000000000000000000010000100000000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23148.004810211100141300000000000010113100200000011000000000000000000010100100100000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21144.004400910000000000110201012110011102200100002000000000000000000010100010000101000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................26143.00433142000000000010110201211132124000000001000000000000000000000100800000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24142.004220102000110100011000010120100201100000002000000000000000101020010000022002100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTAAA...................................................................................................................................................................................23337.671130000000000001000000000000020000020121120000000000000000000000000401811130000006451318
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................23135.00350013200000000000000010211030300000000020000001000000011000210000000002100003301
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................22134.00340137000000000000000000001100023300000000000000000000000000010000033030010000002
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................22134.00340061012100000000000010001010302300000010000000000000000000000000610100100000200
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTCT.................................................................................................................................................................................25134.00348120000000000000000000010100111500000000000000000000000002100000200040111100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTCT................................................................................................................................................................................26133.00336310010000000000000010000001002200000001000000001011201001100000010000010500000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19133.003300300000000000000000000000000000000000000000000000000000000000030000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................23132.00320040011100000010011000001000020101000000000000000000000000040000000040125100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGCA.................................................................................................................................................................................25129.002900000000000000000000000000000000001125320000000000000000000000000002200000010010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAAT...............................................................................................................................................................................27125.00250010000000002000000000001001000000100100000000000000000000000000043000000010244
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23124.002400171000000000000000000001000200100000000000000000000000000000000100100000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................23124.002410023000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19122.002200210000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGCC.................................................................................................................................................................................25122.002213000000000000000000000000000000000000000000000000010001000000000000001001500000
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGGAGC................................................................................................................................................................................23120.00200001000001000000000000000000000100000000000000000000022000100000000030142100010
...............................................................................................................................................CCTCACCCGATTCTCAAAGGT..........................................................................................................................................................................................................21120.00200000000000000000000000011122013500000020000000000000000000001000100000000000000
......................................................................................................................................................................................................................GGAATTTCAGTTGGTATCGAC...................................................................................................................................21120.00200050002000000000000000000101000000000000000001010000212010120000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAC.................................................................................................................................................................................25120.00202005000000000000000000011010000000000000000000000000000000000000003210002010001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAT..................................................................................................................................................................................24118.00184010000100000000000001010000010000001000000000000000000000000000000120003000002
...................................................................................................................................................................TAAATATCAGCTGGTAATTCT......................................................................................................................................................................................21118.00180020000000000000000000001100002300000006000000000000000000000000000030000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAG................................................................................................................................................................................26118.00180000000000000000000000001011000010010100000000000000000000000000010300000010043
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTCC.................................................................................................................................................................................25116.00166000000000000000000000010000210200000001000000000000000000000000000000011100000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................22115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAGA................................................................................................................................................................................26115.00150000000000000000000000000000000010000000000000000000000000000000032110010000024
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGACA................................................................................................................................................................................26114.00140000001000000000000000000000000000055110000000000000000000000000000000000010000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGATT................................................................................................................................................................................26114.00140010000010000000000000100100000000010003000000000000000000000000010012000110000
....................................................................................................................................................................AAATATCAGCTGGTAATTCA......................................................................................................................................................................................20114.00140040000000000001001000010010030100000000000000000000000000001000000001000000000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCG.....................................................................................................................................21113.00130000010000000000000000000000031000000000000000000000000000000000000000420100001
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTC...................................................................................................................................................................................23113.00130020000000000000000000120010210201000001000000000000000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAG..................................................................................................................................................................................24112.00120000000000000000000000000001000010000000000000000000000000000000000200000020024
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTCC..................................................................................................................................................................................24112.00121030000000000000000000000000110001000003000000000000000000000000000000000200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTAT................................................................................................................................................................................26112.00121010000001000000000000001000020201011100000000000000000000000000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................20111.00110023000000000000000000000000100100000001000000000000000000000000110001000000000
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................18110.00100060000000000000000000001000000000000000000000000000000000000000000001002000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAA...................................................................................................................................22110.00100000010000000000000000000100000201000000000000000000000000000000110000000000012
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................24110.00100000000000000000000000001011000001000010000000000000000000000000000030000110000
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGAC...................................................................................................................................2319.0090000000000000000000000001000000000000000000000000000000000000030211000000000001
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................1819.0090030000000000000000000000200101100000000000000000000000000010000000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTT.......................................................................................................................................................................................1919.0090040000000000020000000000000100100000001000000000000000000000000000000000000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGAG.................................................................................................................................................................................2319.0090000000002000000000000000000010000000000000000000000000000000100300002000000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2218.0081001000100000000000000000010000001000000000000000000000100000020000000000000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAC..................................................................................................................................................................................2418.0082013000000000000000000000000000000000000000000000000000000000000000000200000000
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2218.0080010000000000000000000000000110000000000000000000000000000000050000000000000000
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACAA.................................................................................................................................2418.0080010000000000000000000000000000000000000000000000000000000000000001200000000130
droMoj3
GCATGTGTGCA------TGG--CTGTT-------------------AGTGTG------T-----GAGCAAGAGCGAGTGAAC------------------------------------------------CAGCTGT----CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCC-AATA--TGAAACACTCGGAATTTCAGTTGGTATATACTTTTTTGAATTGCATTTTATCACCA-A--A--------------GCGCAAA-----------CCAAAAAAGAACAAGAAAAGCAAAGAGAAACTTA---A-A-AATAA-AAA----------------CAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................231144761.0014476124321775355117112058457
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................22152781.005278121446146693115123
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2118316.0083167016129311110057
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2413411.00341161419825382179357
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2412773.00277347521620331861168
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2212058.00205818317002200
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................2011871.0018711376183971166201
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2111541.0015411480000610
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................1911523.0015236000114593
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................231811.00811593007481
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATATAC...................................................................................................................................221649.00649220126168
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGC..................................................................................................................................................................................241612.00612437115600
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................231495.00495123165433413
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................201451.0045145100000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................231300.003001356021561
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................211253.002531405011034
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................191232.002326456001102
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGAC...................................................................................................................................................................................231224.0022400002240
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................221221.002211661423810
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGC....................................................................................................................................................................................221220.00220150002050
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................201213.00213186000270
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................201120.0012038610750
.................................................................................................................................................TCACCCGATTCTCAAAGGT..........................................................................................................................................................................................................191119.00119132611726
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................251118.00118332106715
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................231100.00100521002324
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATATA....................................................................................................................................21193.00939000795
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19187.00878610000
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................18185.008552300300
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................18170.0070221702821
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................25167.006721210367
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................19165.00656300011
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGA....................................................................................................................................................................................22163.006319010430
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................19158.005839000190
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGG..................................................................................................................................................................................24145.004514200263
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATAT.....................................................................................................................................21143.004312000310
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAT.................................................................................................................................................................................25143.004316002178
....................................................................................................................................................................AAATATCAGCTGGTAATTCTC.....................................................................................................................................................................................21135.003511001212
.........................................................................................................................................................................................................................ATTTCAGTTGGTATATACTTTT...............................................................................................................................22134.003415300160
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATATA....................................................................................................................................22132.00323000281
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATATACA..................................................................................................................................23131.00310000310
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................23129.00292210150
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATAT.....................................................................................................................................20129.00294000241
.................................................................................................................................................TCACCCGATTCTCAAAGGC..........................................................................................................................................................................................................19129.00290000290
.........................................................................................................................................................................TCAGCTGGTAATTCTGGG...................................................................................................................................................................................18129.002912300140
....................................................................................................................................................................AAATATCAGCTGGTAATTCC......................................................................................................................................................................................20128.00280001270
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................21128.00282300122
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................24126.00262500010
...........................................................................................................................................................................................AGCAATGCCC-AATA--TGAAACACT.........................................................................................................................................................23121.00214200150
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................23119.00191800010
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAAA................................................................................................................................................................................26119.00191110016
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................24119.00191010080
................................................................................................................................................CTCACCCGATTCTCAAAGGT..........................................................................................................................................................................................................20118.00181300131
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGAC..................................................................................................................................................................................24114.00140000140
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................25114.00143000110
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................22112.00121200000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTC.................................................................................................................................................................................25111.00110000110
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................18110.00101000000
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGT....................................................................................................................................................................................21110.00101000000
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTTT................................................................................................................................................................................2619.009500022
....................................................................................................................................................................AAATATCAGCTGGTAATTCTA.....................................................................................................................................................................................2118.008510020
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTC...................................................................................................................................................................................2318.008400013
droGri2
CAGACAGAGA----------------------------------------------------------------------------------------------------------------AAGAAAGAATGACGT----CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATA--TGAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCACCA-A--A--------------TCGCAAA-AA----AAACCCAAAAAAAAACA-------AAA-----------GA-AAA-ATCCA---A----------------AAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2211301.00130112965
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................231828.0082879038
....................................................................................................................................................................AAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................211455.004554487
....................................................................................................................................................................AAATATCAGCTGGTAATTCT......................................................................................................................................................................................201158.0015813622
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGG....................................................................................................................................................................................21185.0085850
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................24152.00521933
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................22150.0050500
.....................................................................................................................................................................AATATCAGCTGGTAATTCTG.....................................................................................................................................................................................20141.0041410
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................24127.00271512
....................................................................................................................................................................AAATATCAGCTGGTAATTC.......................................................................................................................................................................................19116.0016151
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGT...................................................................................................................................................................................23114.0014140
.....................................................................................................................................................................AATATCAGCTGGTAATTCT......................................................................................................................................................................................19110.0010100
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGA...................................................................................................................................................................................2318.00871
........................................................................................................................................................................ATCAGCTGGTAATTCTGG....................................................................................................................................................................................1818.00880
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGT..................................................................................................................................................................................2317.00770
......................................................................................................................................................................ATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2017.00770
....................................................................................................................................................................AAATATCAGCTGGTAATT........................................................................................................................................................................................1817.00716
.......................................................................................................................................................................TATCAGCTGGTAATTCTGG....................................................................................................................................................................................1917.00770
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGAC...................................................................................................................................2216.00651
.................................................................................................................................................TCACCCGATTCTCAAAGGT..........................................................................................................................................................................................................1915.00532
......................................................................................................................................................................ATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2114.00440
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGACT..................................................................................................................................2313.00321
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGT....................................................................................................................................................................................2213.00330
.......................................................................................................................................................................TATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2013.00330
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCGA....................................................................................................................................2112.00211
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGG....................................................................................................................................................................................2312.00220
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGTT..................................................................................................................................................................................2412.00220
....................................................................................................................................................................AAATATCAGCTGGTAATTCTT.....................................................................................................................................................................................2112.00220
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2312.00220
........................................................................................................................................................................ATCAGCTGGTAATTCTGGG...................................................................................................................................................................................1912.00211
.......................................................................................................................................................................TATCAGCTGGTAATTCTG.....................................................................................................................................................................................1811.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGTA.................................................................................................................................................................................2511.00110
.................................................................................................................................AATGACGT----CACCTCACCCGAT....................................................................................................................................................................................................................2111.00101
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGTT.................................................................................................................................................................................2411.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAGCA...............................................................................................................................................................................2711.00110
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................CGGAATTTCAGTTGGTATCG.....................................................................................................................................2011.00110
........................................................................................................................................................................ATCAGCTGGTAATTCTGGA...................................................................................................................................................................................1911.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCA......................................................................................................................................................................................2011.00110
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTGGG...................................................................................................................................................................................2411.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGTT...................................................................................................................................................................................2311.00110
.....................................................................................................................................................................AATATCAGCTGGTAATTC.......................................................................................................................................................................................1811.00110
....................................................................................................................................................................................................................TCGGAATTTCAGTTGGTATCGA....................................................................................................................................2211.00110
......................................................................................................................................................................ATATCAGCTGGTAATTCT......................................................................................................................................................................................1811.00110
...........................................................................................................................................................................................AGCAATGCC-AAATA--TGAAACACT.........................................................................................................................................................2311.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGAA.................................................................................................................................................................................2511.00110
..........................................................................................................................................................................CAGCTGGTAATTCTGGGT..................................................................................................................................................................................1811.00110
......................................................................................................................................................................ATATCAGCTGGTAATTCTG.....................................................................................................................................................................................1911.00110
...................................................................................................................................................................TAAATATCAGCTGGTAATTCTG.....................................................................................................................................................................................2211.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGGCT.................................................................................................................................................................................2511.00110
.....................................................................................................................................................................AATATCAGCTGGTAATTCTGGGCA.................................................................................................................................................................................2411.00110
....................................................................................................................................................................AAATATCAGCTGGTAATTCTGGC...................................................................................................................................................................................2311.00110
........................................................................................................................................................................ATCAGCTGGTAATTCTGGGA..................................................................................................................................................................................2011.00110

Generated: 10/20/2015 at 07:29 PM