ID:

der-mir-281-2

 Coordinate:

scaffold_4845:17736415-17736506 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.1 -32.9 -32.9

Flybase annnotation

intron [Dere\GG22602-in]; Antisense to utr3 [utr3_plus_2214]; pre_miRNA [Dere\mir-281-2-RM]; miRNA [Dere\miR-281-2-RB]; miRNA [Dere\miR-281-2-star-RA]

No Repeatable elements found

mature

star

  1. der-mir-281-1  scaffold_4845:17736254-17736275 +
  2. der-mir-281-2  scaffold_4845:17736474-17736495 +

Sense Strand Reads

TGTCTGTCCTGTGGTGCTAGCGCTCCAGCTATTCGCTTTCAGATCCTCCACGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTAATACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTAGATTATATCGAATTGATGTGCTTAATTTTAGGCCAA

*************************************************.(((((.((...(((((((((((..(((((.((((((.....((((....))))....)))))))))))...)))))))))))...)))))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 V107

male body		 V108

head

 M057

embryo

 V060

head

 V040

embryo

 GSM1528801

follicle cells
................................................................AAGAGAGCTATCCGTCGACAGTC......................................................................................................... 23 0 1 94217.00 94217 28164 54576 6528 2777 761 628 783
.............................................................................................................TGTCATGGAATTGCTCTCTTTG............................................................. 22 0 2 52150.50 104301 80776 19685 2862 52 652 266 8
................................................................AAGAGAGCTATCCGTCGACAGT.......................................................................................................... 22 0 1 47296.00 47296 15780 28048 2569 364 298 184 53
............................................................................................................CTGTCATGGAATTGCTCTCTTTG............................................................. 23 0 2 44392.00 88784 50916 31420 4800 106 579 570 393
................................................................AAGAGAGCTATCCGTCGACAG........................................................................................................... 21 0 1 19930.00 19930 7278 11287 1167 28 135 34 1
.............................................................................................................TGTCATGGAATTGCTCTCTTTGT............................................................ 23 0 2 12153.00 24306 14380 7728 1344 105 306 274 169
.............................................................................................................TGTCATGGAATTGCTCTCTTT.............................................................. 21 0 2 9273.50 18547 13944 4029 467 10 82 15 0
................................................................AAGAGAGCTATCCGTCGACA............................................................................................................ 20 0 1 8940.00 8940 2463 6050 364 4 57 1 1
................................................................AAGAGAGCTATCCGTCGACAGTCT........................................................................................................ 24 1 1 7479.00 7479 1107 5318 877 33 27 22 95
............................................................................................................CTGTCATGGAATTGCTCTCTTT.............................................................. 22 0 2 6453.00 12906 9280 3239 311 17 38 11 10
..............................................................................................................GTCATGGAATTGCTCTCTTTG............................................................. 21 0 2 3251.00 6502 6375 117 9 0 1 0 0
................................................................AAGAGAGCTATCCGTCGACAGTT......................................................................................................... 23 1 1 2363.00 2363 482 1547 289 2 14 1 28
.................................................................AGAGAGCTATCCGTCGACAGTC......................................................................................................... 22 0 1 2237.00 2237 2080 130 17 2 2 1 5
.................................................................AGAGAGCTATCCGTCGACAGT.......................................................................................................... 21 0 1 1229.00 1229 1188 31 7 1 2 0 0
................................................................AAGAGAGCTATCCGTCGACAGTCC........................................................................................................ 24 1 2 1207.00 2414 941 1192 122 83 13 6 57
................................................................AAGAGAGCTATCCGTCGACAGTCA........................................................................................................ 24 0 1 1149.00 1149 484 586 50 5 7 5 12
............................................................................................................CTGTCATGGAATTGCTCTCTT............................................................... 21 0 2 1095.50 2191 1440 692 42 4 13 0 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTGC............................................................ 23 1 2 916.50 1833 1002 618 116 40 47 10 0
..............................................................................................................GTCATGGAATTGCTCTCTTTGT............................................................ 22 0 2 876.00 1752 1171 514 48 0 5 14 0
................................................................AAGAGAGCTATCCGTCGAC............................................................................................................. 19 0 1 700.00 700 188 478 19 2 4 2 7
............................................................................................................CTGTCATGGAATTGCTCTCTTTGT............................................................ 24 0 2 690.00 1380 615 629 105 5 15 6 5
.............................................................................................................TGTCATGGAATTGCTCTCTTTGA............................................................ 23 1 2 638.00 1276 633 351 253 2 6 13 18
.............................................................................................................TGTCATGGAATTGCTCTCTT............................................................... 20 0 2 623.00 1246 920 294 25 1 5 1 0
................................................................AATAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 588.00 588 108 423 56 0 0 1 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTT............................................................. 22 1 2 565.00 1130 792 235 48 0 29 26 0
..............................................................................................................GTCATGGAATTGCTCTCTTT.............................................................. 20 0 2 552.00 1104 1094 9 1 0 0 0 0
.................................................................AGAGAGCTATCCGTCGACAG........................................................................................................... 20 0 1 517.00 517 508 8 1 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTT............................................................. 23 1 2 465.00 930 524 228 86 2 31 59 0
................................................................AAGAGAGCTATCCGTCGACAGA.......................................................................................................... 22 1 1 388.00 388 103 256 24 0 4 1 0
................................................................AAGAGAGCTATCCGTCGACAGTA......................................................................................................... 23 1 1 384.00 384 81 180 102 1 2 2 16
................................................................AAGAGAGCTATCCGTCGACATTC......................................................................................................... 23 1 1 371.00 371 311 25 26 6 1 2 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTGTT........................................................... 24 1 2 330.50 661 380 217 23 1 8 4 28
................................................................AATAGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 302.00 302 70 211 20 0 0 1 0
.............................................................................................................TTTCATGGAATTGCTCTCTTTG............................................................. 22 1 2 286.50 573 408 145 11 9 0 0 0
................................................................AAGAGAGCTATCCGTCTACAGTC......................................................................................................... 23 1 1 269.00 269 74 120 66 1 4 4 0
................................................................AGGAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 252.00 252 41 91 7 112 1 0 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTGA............................................................ 24 1 2 246.50 493 268 113 99 0 2 11 0
................................................................AAGAGAGCTATCCGTCGCCAGTC......................................................................................................... 23 1 1 216.00 216 83 22 9 0 17 4 81
.............................................................................................................TGTAATGGAATTGCTCTCTTTG............................................................. 22 1 2 208.50 417 381 9 26 0 1 0 0
................................................................AAGAGAGCTATCCGTCGACAGC.......................................................................................................... 22 1 1 207.00 207 11 109 11 70 6 0 0
...............................................................................................................TCATGGAATTGCTCTCTTTG............................................................. 20 0 2 203.00 406 389 12 4 0 1 0 0
............................................................................................................CTTTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 195.50 391 205 165 17 0 0 3 1
................................................................AAGAGAGCTATCCGTCGACAGCC......................................................................................................... 23 1 1 193.00 193 25 126 17 11 3 6 5
............................................................................................................CTGTCATGGAATTGCTCTCT................................................................ 20 0 2 187.00 374 148 215 10 0 1 0 0
................................................................AAGAGAGCTATCCGTCGACATT.......................................................................................................... 22 1 1 185.00 185 160 13 10 2 0 0 0
.............................................................................................................TGTCATGGCATTGCTCTCTTTG............................................................. 22 1 2 179.50 359 334 24 1 0 0 0 0
.............................................................................................................TGTCATGAAATTGCTCTCTTTG............................................................. 22 1 2 161.50 323 309 12 2 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTCTTGG............................................................. 22 1 2 161.00 322 322 0 0 0 0 0 0
................................................................AATAGAGCTATCCGTCGACAG........................................................................................................... 21 1 1 153.00 153 31 115 7 0 0 0 0
................................................................AAGAGAGCTATCCGTCTACAGT.......................................................................................................... 22 1 1 151.00 151 67 59 22 1 1 0 1
.............................................................................................................TGTCATGGAATTGCTCTCTTTGTA........................................................... 24 0 2 147.00 294 141 114 20 5 6 8 0
................................................................AAGATAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 147.00 147 26 51 63 2 0 4 1
.............................................................................................................TGGCATGGAATTGCTCTCTTTG............................................................. 22 1 2 144.00 288 223 58 2 0 4 1 0
.................................................................AGAGAGCTATCCGTCGACA............................................................................................................ 19 0 1 136.00 136 131 5 0 0 0 0 0
................................................................AAGCGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 134.00 134 122 7 3 1 1 0 0
................................................................AACAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 123.00 123 8 29 8 78 0 0 0
............................................................................................................CGGTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 122.00 244 126 100 1 17 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTATTTG............................................................. 22 1 2 120.50 241 205 14 22 0 0 0 0
................................................................AAGAGAGATATCCGTCGACAGTC......................................................................................................... 23 1 1 112.00 112 63 11 27 9 1 0 1
............................................................................................................CTGTCATGAAATTGCTCTCTTTG............................................................. 23 1 2 110.50 221 185 28 8 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAT........................................................................................................... 21 1 1 108.00 108 80 15 13 0 0 0 0
.............................................................................................................TGTCATGGAATTTCTCTCTTTG............................................................. 22 1 2 107.50 215 165 14 29 0 5 2 0
............................................................................................................TTGTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 107.00 214 191 15 6 0 2 0 0
................................................................AAGAGAGCTATCCGTCGACAGTTT........................................................................................................ 24 2 1 107.00 107 36 51 20 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCTGTG............................................................. 23 1 2 104.50 209 205 2 1 0 0 1 0
................................................................AAGAGAGCTATTCGTCGACAGTC......................................................................................................... 23 1 1 102.00 102 81 14 2 3 2 0 0
.................................................................AGAGAGCTATCCGTCGACAGTCT........................................................................................................ 23 1 1 99.00 99 80 16 3 0 0 0 0
................................................................AAGAGAGCTATCCTTCGACAGTC......................................................................................................... 23 1 1 98.00 98 31 35 22 0 1 1 8
................................................................AAGAGGGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 97.00 97 13 59 15 6 2 1 1
................................................................AAGAGAGCTATCCGTTGACAGTC......................................................................................................... 23 1 1 96.00 96 53 37 4 2 0 0 0
............................................................................................................CTGCCATGGAATTGCTCTCTTTG............................................................. 23 1 2 95.50 191 88 95 5 1 1 1 0
................................................................AGGAGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 95.00 95 29 53 2 11 0 0 0
............................................................................................................CTGTAATGGAATTGCTCTCTTTG............................................................. 23 1 2 95.00 190 128 20 38 0 0 1 3
................................................................AAGTGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 94.00 94 4 4 0 86 0 0 0
................................................................AAGAGAGCTATCCGTCGA.............................................................................................................. 18 0 1 89.00 89 36 46 5 1 0 0 1
................................................................TAGAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 89.00 89 71 3 3 12 0 0 0
............................................................................................................CTGTCATGGACTTGCTCTCTTTG............................................................. 23 1 2 89.00 178 109 59 4 0 2 4 0
................................................................AAGAGATCTATCCGTCGACAGTC......................................................................................................... 23 1 1 89.00 89 12 28 35 8 1 4 1
................................................................AAGAGAGCTATCAGTCGACAGTC......................................................................................................... 23 1 1 86.00 86 4 34 40 5 1 1 1
................................................................AAGAGAGCTATCCGTCGCCAGT.......................................................................................................... 22 1 1 83.00 83 65 10 5 0 2 0 1
.............................................................................................................TTTCATGGAATTGCTCTCTTTGT............................................................ 23 1 2 83.00 166 69 60 4 32 0 1 0
................................................................AAGCGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 82.00 82 71 8 3 0 0 0 0
................................................................AAGGGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 81.00 81 13 45 15 5 1 2 0
..................................................................GAGAGCTATCCGTCGACAGTC......................................................................................................... 21 0 1 80.00 80 67 7 1 1 0 0 4
.............................................................................................................TGTCATGGAATTGCTCTCT................................................................ 19 0 2 78.50 157 107 46 2 1 1 0 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTA............................................................. 22 1 2 77.50 155 123 27 5 0 0 0 0
...............................................................CAAGAGAGCTATCCGTCGACAGTC......................................................................................................... 24 1 1 76.00 76 30 41 4 1 0 0 0
................................................................AAGAGAGCTATCCGTCGACT............................................................................................................ 20 1 1 76.00 76 16 57 3 0 0 0 0
................................................................AAGATAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 75.00 75 21 21 31 0 0 2 0
..................................................................AAGAGCTATCCGTCGACAGTC......................................................................................................... 21 1 1 75.00 75 21 46 5 2 1 0 0
............................................................................................................CTGTCATTGAATTGCTCTCTTTG............................................................. 23 1 2 74.50 149 47 42 55 0 0 5 0
.............................................................................................................CGTCATGGAATTGCTCTCTTTG............................................................. 22 1 2 73.50 147 124 19 3 0 0 1 0
................................................................AAGAGAGCTATCCGTAGACAGTC......................................................................................................... 23 1 1 73.00 73 4 21 40 0 4 1 3
............................................................................................................CTGTCATGGAATTGCTCTCTTTA............................................................. 23 1 2 72.00 144 62 33 49 0 0 0 0
................................................................AAGAGAGCTATCCGTCAACAGTC......................................................................................................... 23 1 1 72.00 72 26 38 3 3 1 0 1
............................................................................................................CTGTCATGGAATTTCTCTCTTTG............................................................. 23 1 2 72.00 144 94 23 20 0 2 5 0
................................................................AAGAGAGCTATCCGTCGACAGTG......................................................................................................... 23 1 1 71.00 71 17 22 28 3 1 0 0
................................................................AAAAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 71.00 71 30 26 13 0 0 2 0
................................................................AAGAGAGCTATTCGTCGACAGT.......................................................................................................... 22 1 1 70.00 70 60 9 1 0 0 0 0
.............................................................................................................GGTCATGGAATTGCTCTCTTTG............................................................. 22 1 2 70.00 140 108 32 0 0 0 0 0
................................................................AAGAGAGCTATCTGTCGACAGTC......................................................................................................... 23 1 1 69.00 69 12 40 12 2 3 0 0
................................................................AAGAGAGCTATCCATCGACAGTC......................................................................................................... 23 1 1 67.00 67 14 39 9 0 1 0 4
............................................................................................................ATGTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 67.00 134 43 51 39 0 0 1 0
................................................................AAGAGAGCTATCCGTTGACAGT.......................................................................................................... 22 1 1 67.00 67 36 29 1 1 0 0 0
.............................................................................................................TGTCATTGAATTGCTCTCTTTG............................................................. 22 1 2 66.00 132 82 14 32 1 1 2 0
................................................................AAGACAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 66.00 66 44 16 4 1 0 1 0
................................................................AAGAGAGCTATCCGCCGACAGTC......................................................................................................... 23 1 1 64.00 64 13 36 7 0 3 3 2
.............................................................................................................TGTCATGGAATTGCTTTCTTTG............................................................. 22 1 2 62.50 125 119 5 0 0 1 0 0
................................................................AAGAGAGCTATCCTTCGACAGT.......................................................................................................... 22 1 1 60.00 60 35 13 10 0 0 2 0
................................................................ATGAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 60.00 60 21 13 2 24 0 0 0
............................................................................................................CTGACATGGAATTGCTCTCTTTG............................................................. 23 1 2 60.00 120 85 29 3 1 0 2 0
.............................................................................................................TGTCATGGAATCTCTCTCTTTG............................................................. 22 2 2 59.50 119 109 9 1 0 0 0 0
................................................................AATAGAGCTATCCGTCGACA............................................................................................................ 20 1 1 59.00 59 12 45 2 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTTT............................................................ 23 1 2 58.50 117 63 18 2 1 11 17 5
..............................................................................................................GTCATGGAATTGCTCTCTTTGC............................................................ 22 1 2 58.50 117 96 19 2 0 0 0 0
................................................................AAGAGTGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 58.00 58 51 4 1 2 0 0 0
...............................................................GAAGAGAGCTATCCGTCGACAGT.......................................................................................................... 23 0 1 58.00 58 19 34 1 0 0 1 3
.........................................................................................................ATACTGTCATGGAATTGCTCTCT................................................................ 23 0 1 58.00 58 12 43 2 0 0 1 0
................................................................AAGAGAGCTACCCGTCGACAGTC......................................................................................................... 23 1 1 58.00 58 18 31 6 3 0 0 0
..............................................................................................................GTCATGGAATTGCTCTCTTTT............................................................. 21 1 2 57.00 114 113 1 0 0 0 0 0
................................................................AAGAGAGCTATCCGTCCACAGTC......................................................................................................... 23 1 1 56.00 56 15 29 5 0 0 6 1
.............................................................................................................TTTCATGGAATTGCTCTCTTT.............................................................. 21 1 2 56.00 112 73 29 3 7 0 0 0
................................................................AATAGAGCTATCCGTCGACAGTCT........................................................................................................ 24 2 1 55.00 55 2 41 11 0 0 0 1
................................................................AAGAGAGCTATACGTCGACAGTC......................................................................................................... 23 1 1 54.00 54 3 20 22 8 0 0 1
.............................................................................................................TGTCATGGAATTGCTCTCTTG.............................................................. 21 1 2 54.00 108 91 13 4 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACACTC......................................................................................................... 23 1 1 52.00 52 22 21 4 1 0 4 0
.............................................................................................................AGTCATGGAATTGCTCTCTTTG............................................................. 22 1 2 51.50 103 95 4 4 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTC............................................................. 23 1 2 51.50 103 44 8 50 0 1 0 0
................................................................AAGGGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 51.00 51 13 30 7 0 1 0 0
................................................................AAGAGAGCTATCCGTCGACAGAC......................................................................................................... 23 1 1 50.00 50 8 18 2 15 2 1 4
................................................................AAGAGAGCTATCCGTCGACAGTCTT....................................................................................................... 25 2 1 49.00 49 20 28 1 0 0 0 0
............................................................................................................CTGTCATGGAATTGCCCTCTTTG............................................................. 23 1 2 48.50 97 60 29 6 1 0 1 0
................................................................AAGAGAGCTATCCGTCGATAGTC......................................................................................................... 23 1 1 48.00 48 7 30 5 1 2 3 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTGG............................................................ 23 1 2 47.50 95 85 3 5 1 0 1 0
.............................................................................................................TGCCATGGAATTGCTCTCTTTG............................................................. 22 1 2 47.50 95 60 30 2 2 1 0 0
................................................................TAGAGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 47.00 47 44 1 0 2 0 0 0
................................................................AAGAGAGCTATCCGTCGGCAGTC......................................................................................................... 23 1 1 47.00 47 6 32 2 2 2 1 2
.............................................................................................................TGTAATGGAATTGCTCTCTTTGT............................................................ 23 1 2 46.00 92 75 4 13 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAGTCG........................................................................................................ 24 1 1 45.00 45 23 16 4 0 1 0 1
................................................................GAGAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 44.00 44 6 32 5 0 1 0 0
.............................................................................................................TGTCATGCAATTGCTCTCTTTG............................................................. 22 1 2 44.00 88 81 5 2 0 0 0 0
................................................................AAGAGGGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 44.00 44 16 22 5 0 0 1 0
.............................................................................................................TGTCATGGAATTGCTCTCTTTC............................................................. 22 1 2 43.50 87 72 12 3 0 0 0 0
..................................................................GAGAGCTATCCGTCGACAGT.......................................................................................................... 20 0 1 43.00 43 36 6 1 0 0 0 0
.............................................................................................................TGTAATGGAATTGCTCTCTTT.............................................................. 21 1 2 42.50 85 78 1 6 0 0 0 0
.............................................................................................................TGTCATGGAATTGCCCTCTTTG............................................................. 22 1 2 41.50 83 55 18 7 0 3 0 0
...............................................................................................................TCATGGAATTGCTCTCTTTGT............................................................ 21 0 2 41.50 83 75 5 0 0 3 0 0
............................................................................................................CTGTCATGGAATCTCTCTCTTTG............................................................. 23 2 2 41.50 83 73 9 1 0 0 0 0
.............................................................................................................TGTCCTGGAATTGCTCTCTTTG............................................................. 22 1 2 41.50 83 55 26 1 0 1 0 0
................................................................AAGAGAGCTATCTGTCGACAGT.......................................................................................................... 22 1 1 41.00 41 9 30 2 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTGG............................................................ 24 1 2 41.00 82 81 1 0 0 0 0 0
................................................................AAGAGAGCTATCCGTCCACAGT.......................................................................................................... 22 1 1 41.00 41 12 25 2 0 2 0 0
............................................................................................................CTGTCTTGGAATTGCTCTCTTTG............................................................. 23 1 2 40.50 81 69 9 2 1 0 0 0
................................................................AAGCGAGCTATCCGTCGACAG........................................................................................................... 21 1 1 40.00 40 36 3 1 0 0 0 0
............................................................................................................CTGTCATGTAATTGCTCTCTTTG............................................................. 23 1 2 40.00 80 21 26 21 0 2 10 0
.............................................................................................................TGTCATGGAATTACTCTCTTTG............................................................. 22 1 2 40.00 80 60 16 0 0 0 4 0
................................................................AAGAGAGCTATCCGGCGACAGTC......................................................................................................... 23 1 1 39.00 39 23 6 2 1 0 7 0
................................................................AAGAGAGCTATCCCTCGACAGTC......................................................................................................... 23 1 1 39.00 39 5 20 2 0 0 6 6
.............................................................................................................TGTCATGGCATTGCTCTCTTTGT............................................................ 23 1 2 38.50 77 66 6 3 0 1 1 0
................................................................AAGAGAGCCATCCGTCGACAGTC......................................................................................................... 23 1 1 38.00 38 12 15 9 2 0 0 0
................................................................AAGACAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 37.00 37 18 17 2 0 0 0 0
............................................................................................................CTGTCATGGTATTGCTCTCTTTG............................................................. 23 1 2 37.00 74 65 7 2 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTCTGTG............................................................. 22 1 2 37.00 74 70 3 0 0 0 1 0
.................................................................AGAGAGCTATCCGTCGACAGTCC........................................................................................................ 23 1 2 37.00 74 70 4 0 0 0 0 0
................................................................AAGAGAACTATCCGTCGACAGTC......................................................................................................... 23 1 1 37.00 37 21 11 3 0 0 2 0
.................................................................AGAGAGCTATCCGTCGACAGTCA........................................................................................................ 23 0 1 37.00 37 35 1 1 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAATC......................................................................................................... 23 1 1 36.00 36 12 20 2 2 0 0 0
............................................................................................................CTGTCATGGAATTGCTCCCTTTG............................................................. 23 1 2 36.00 72 38 24 7 0 0 2 1
................................................................AAGAGAGCTATCCGCCGACAGT.......................................................................................................... 22 1 1 36.00 36 13 19 3 0 0 1 0
.............................................................................................................TGTCATGGAATTGCTCTCGTTG............................................................. 22 1 2 36.00 72 70 1 0 0 1 0 0
................................................................AAGATAGCTATCCGTCGACAG........................................................................................................... 21 1 1 36.00 36 10 13 13 0 0 0 0
..................................................................AAGAGCTATCCGTCGACAGT.......................................................................................................... 20 1 1 36.00 36 7 26 2 0 0 1 0
................................................................AAGAGAGCTATCCGTCGACAGG.......................................................................................................... 22 1 1 35.00 35 11 22 0 1 0 1 0
.............................................................................................................TGTCATGGGATTGCTCTCTTTG............................................................. 22 1 2 35.00 70 51 15 0 0 2 2 0
.............................................................................................................TGTTATGGAATTGCTCTCTTTG............................................................. 22 1 2 35.00 70 59 8 1 1 1 0 0
............................................................................................................CCGTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 34.50 69 37 26 4 0 1 1 0
................................................................AAGAGAGCTATCCGTCGCCAG........................................................................................................... 21 1 1 34.00 34 24 4 0 0 6 0 0
................................................................AAGAGAGCTATCCGTCGAAAGTC......................................................................................................... 23 1 1 34.00 34 3 7 19 0 3 1 1
.............................................................................................................TGTCATGGCATTGCTCTCTTT.............................................................. 21 1 2 34.00 68 67 1 0 0 0 0 0
................................................................AAGAGAGATATCCGTCGACAGT.......................................................................................................... 22 1 1 34.00 34 19 3 11 0 0 1 0
................................................................AAGAGAGCTATCCGTCGACAGGC......................................................................................................... 23 1 1 34.00 34 2 20 4 0 1 5 2
................................................................AAGAGAGCTATCCGTCTACAG........................................................................................................... 21 1 1 34.00 34 12 8 14 0 0 0 0
.............................................................................................................TGTCATGAAATTGCTCTCTTTGT............................................................ 23 1 2 34.00 68 55 10 3 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTCTTGGT............................................................ 23 1 2 34.00 68 64 3 1 0 0 0 0
.............................................................................................................TATCATGGAATTGCTCTCTTTG............................................................. 22 1 2 33.50 67 49 13 3 1 1 0 0
................................................................AAGAGAGCTATCCGTCAACAGT.......................................................................................................... 22 1 1 33.00 33 13 16 2 0 1 1 0
.................................................................AGAGAGCTATCCGTCGACAGGC......................................................................................................... 22 1 1 33.00 33 33 0 0 0 0 0 0
................................................................AAGAGAGCTATCAGTCGACAGT.......................................................................................................... 22 1 1 33.00 33 1 13 18 1 0 0 0
................................................................AGGAGAGCTATCCGTCGACAG........................................................................................................... 21 1 1 33.00 33 12 20 0 1 0 0 0
................................................................AAGAGATCTATCCGTCGACAGT.......................................................................................................... 22 1 1 33.00 33 4 14 11 3 0 1 0
.............................................................................................................TGTCATGTAATTGCTCTCTTTG............................................................. 22 1 2 32.50 65 22 22 20 0 0 1 0
.............................................................................................................TCTCATGGAATTGCTCTCTTTG............................................................. 22 1 2 32.50 65 42 19 4 0 0 0 0
.................................................................................................................ATGGAATTGCTCTCTTTG............................................................. 18 0 2 32.00 64 38 23 2 1 0 0 0
................................................................AAAAGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 32.00 32 6 22 4 0 0 0 0
................................................................AAGCGAGCTATCCGTCGCCAGTC......................................................................................................... 23 2 1 32.00 32 31 1 0 0 0 0 0
............................................................................................................CTGTCATGGGATTGCTCTCTTTG............................................................. 23 1 2 31.50 63 28 26 6 0 0 0 3
..............................................................................................................TTCATGGAATTGCTCTCTTTG............................................................. 21 1 2 31.50 63 47 14 2 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAGTAA........................................................................................................ 24 1 1 31.00 31 3 24 1 1 0 0 2
.............................................................................................................TGGCATGGAATTGCTCTCTTTGT............................................................ 23 1 2 31.00 62 36 20 2 0 1 3 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTGC............................................................ 24 1 2 31.00 62 28 30 1 1 1 1 0
................................................................AAGAGAGCTATTCGTCGACAG........................................................................................................... 21 1 1 31.00 31 24 4 3 0 0 0 0
................................................................TAGAGAGCTATCCGTCGACAG........................................................................................................... 21 1 1 31.00 31 28 2 1 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACGGTC......................................................................................................... 23 1 1 31.00 31 12 13 6 0 0 0 0
..............................................................................................................GTCATGGAATTGCTCTCTT............................................................... 19 0 2 30.50 61 61 0 0 0 0 0 0
.............................................................................................................TGTCATGGAACTGCTCTCTTTG............................................................. 22 1 2 30.00 60 39 18 2 0 1 0 0
...............................................................CAAGAGAGCTATCCGTCGACAGT.......................................................................................................... 23 1 1 30.00 30 12 12 5 1 0 0 0
.............................................................................................................TGGCATGGAATTGCTCTCTTT.............................................................. 21 1 2 30.00 60 49 10 1 0 0 0 0
.............................................................................................................TGTCATGGAATTGTTCTCTTTG............................................................. 22 1 2 29.50 59 53 4 2 0 0 0 0
............................................................................................................CTGTCATGGAACTGCTCTCTTTG............................................................. 23 1 2 29.50 59 37 16 4 0 1 1 0
............................................................................................................GTGTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 29.50 59 33 22 1 2 0 1 0
................................................................AAGAGAGTTATCCGTCGACAGTC......................................................................................................... 23 1 1 29.00 29 7 12 5 1 0 0 4
............................................................................................................CTGTTATGGAATTGCTCTCTTTG............................................................. 23 1 2 29.00 58 45 11 2 0 0 0 0
...............................................................................................................TCATGGAATTGCTCTCTTT.............................................................. 19 0 2 29.00 58 55 2 1 0 0 0 0
................................................................................................................CATGGAATTGCTCTCTTTG............................................................. 19 0 2 29.00 58 47 10 1 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCCTTG............................................................. 23 1 2 29.00 58 27 27 3 0 1 0 0
............................................................................................................CTTTCATGGAATTGCTCTCTTT.............................................................. 22 1 2 28.50 57 46 10 0 0 1 0 0
..............................................................................................................CTCATGGAATTGCTCTCTTTG............................................................. 21 1 2 28.00 56 27 27 2 0 0 0 0
............................................................................................................CTGTCATGGAATTGTTCTCTTTG............................................................. 23 1 2 28.00 56 39 13 3 0 1 0 0
............................................................................................................CTGTCATGGAATTGCTATCTTTG............................................................. 23 1 2 28.00 56 0 13 39 0 2 1 1
................................................................AAGAGAGCTATCCGTCGTCAGTC......................................................................................................... 23 1 1 28.00 28 7 16 0 0 2 1 2
............................................................................................................CTGTCATCGAATTGCTCTCTTTG............................................................. 23 1 2 28.00 56 42 10 1 0 0 3 0
.............................................................................................................TGTCGTGGAATTGCTCTCTTTG............................................................. 22 1 2 28.00 56 39 13 2 0 2 0 0
............................................................................................................CTGTCATGGAATTACTCTCTTTG............................................................. 23 1 2 28.00 56 43 9 3 0 0 0 1
................................................................ATGAGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 28.00 28 11 11 1 5 0 0 0
.............................................................................................................CTTCATGGAATTGCTCTCTTTG............................................................. 22 2 2 28.00 56 43 10 3 0 0 0 0
.............................................................................................................TGTCATGGAATCGCTCTCTTTG............................................................. 22 1 2 27.50 55 40 11 4 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTATTTG............................................................. 23 1 2 27.50 55 5 16 31 0 0 1 2
.............................................................................................................TGTCATCGAATTGCTCTCTTTG............................................................. 22 1 2 27.50 55 50 5 0 0 0 0 0
.............................................................................................................TGTCATGGAATTCCTCTCTTTG............................................................. 22 1 2 27.00 54 40 8 5 0 1 0 0
.................................................................AGAGAGCTATCCGTCGACAGG.......................................................................................................... 21 1 1 27.00 27 27 0 0 0 0 0 0
.............................................................................................................TGTCATGGAATGGCTCTCTTTG............................................................. 22 1 2 27.00 54 53 1 0 0 0 0 0
.............................................................................................................TGTCATGGAGTTGCTCTCTTTG............................................................. 22 1 2 27.00 54 40 9 5 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACCGTC......................................................................................................... 23 1 1 27.00 27 3 7 4 0 8 4 1
................................................................AAGAGACCTATCCGTCGACAGT.......................................................................................................... 22 1 1 27.00 27 10 15 2 0 0 0 0
................................................................AAGAGACCTATCCGTCGACAGTC......................................................................................................... 23 1 1 27.00 27 10 17 0 0 0 0 0
............................................................................................................CTGTCATGGAATTCCTCTCTTTG............................................................. 23 1 2 26.00 52 33 13 1 0 1 1 3
.................................................................AGAGAGCTATCCGTCGACAGTT......................................................................................................... 22 1 1 26.00 26 26 0 0 0 0 0 0
................................................................AAGAGAGCTACCCGTCGACAGT.......................................................................................................... 22 1 1 26.00 26 12 11 2 0 0 1 0
................................................................AACAGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 26.00 26 2 8 3 12 1 0 0
.............................................................................................................TGTCATGGAATTGCTATCTTTG............................................................. 22 1 2 25.50 51 9 16 23 0 0 2 1
.............................................................................................................TGTCACGGAATTGCTCTCTTTG............................................................. 22 1 2 25.00 50 41 7 2 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCCCTTTG............................................................. 22 1 2 25.00 50 36 10 3 0 1 0 0
................................................................AAGAGAGCTATCCATCGACAGT.......................................................................................................... 22 1 1 25.00 25 5 18 1 0 0 1 0
............................................................................................................CTGTCGTGGAATTGCTCTCTTTG............................................................. 23 1 2 25.00 50 23 15 9 0 2 1 0
................................................................AAGAGATCTATCCGTCGACAG........................................................................................................... 21 1 1 25.00 25 3 14 8 0 0 0 0
............................................................................................................CTGTCATGGAGTTGCTCTCTTTG............................................................. 23 1 2 24.50 49 17 29 2 0 0 0 1
.............................................................................................................TGTCATGAAATTGCTCTCTTT.............................................................. 21 1 2 24.00 48 39 6 3 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTCCTTG............................................................. 22 1 2 24.00 48 27 16 3 1 1 0 0
................................................................AAGAGTGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 24.00 24 19 4 1 0 0 0 0
................................................................AAGAGAGCTATCCGTTGACAG........................................................................................................... 21 1 1 24.00 24 16 8 0 0 0 0 0
.............................................................................................................TGTCATGGAATTTCTCTCTTTGT............................................................ 23 1 2 23.50 47 28 6 8 0 1 4 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTGTT........................................................... 25 1 2 23.50 47 30 14 3 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCTTTTT............................................................ 24 1 2 23.50 47 24 18 3 0 1 1 0
................................................................AAGAGAGCTATCCGTCGACAA........................................................................................................... 21 1 1 23.00 23 13 10 0 0 0 0 0
................................................................AAGAGAGTTATCCGTCGACAGT.......................................................................................................... 22 1 1 23.00 23 9 10 3 0 1 0 0
................................................................AAGAGAGCTATCCGTCGGCAGT.......................................................................................................... 22 1 1 23.00 23 4 14 2 1 2 0 0
................................................................AAGAGAGATATCCGTCGACAG........................................................................................................... 21 1 1 23.00 23 16 2 5 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAGTTTT....................................................................................................... 25 3 1 23.00 23 2 17 4 0 0 0 0
............................................................................................................CTGTCATGGAATTGCTCTCGTTG............................................................. 23 1 2 22.50 45 41 1 0 0 0 3 0
............................................................................................................CTGTCATGGCATTGCTCTCTTTG............................................................. 23 1 2 22.50 45 8 28 2 0 4 2 1
................................................................AAGAGCGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 22.00 22 5 8 6 0 0 1 2
............................................................................................................CTGTCATGAAATTGCTCTCTTT.............................................................. 22 1 2 22.00 44 38 4 2 0 0 0 0
................................................................ACGAGAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 22.00 22 0 14 5 0 2 0 1
.............................................................................................................TGTCATGGAATTGCTCTATTTGT............................................................ 23 1 2 22.00 44 28 4 11 0 1 0 0
................................................................AAGAGAGCTATCCTTCGACAG........................................................................................................... 21 1 1 22.00 22 14 8 0 0 0 0 0
.............................................................................................................TGTCAGGGAATTGCTCTCTTTG............................................................. 22 1 2 21.50 43 36 6 0 0 0 1 0
............................................................................................................CTGTCATGGAATTGCTCTCTTG.............................................................. 22 1 2 21.50 43 15 26 2 0 0 0 0
................................................................AAGAGAGCCATCCGTCGACAGT.......................................................................................................... 22 1 1 21.00 21 8 10 2 0 1 0 0
..............................................................................................................GTCATGGAATTGCTCTCTTTGA............................................................ 22 1 2 21.00 42 42 0 0 0 0 0 0
................................................................AAGAAAGCTATCCGTCGACAGTC......................................................................................................... 23 1 1 21.00 21 8 8 3 0 1 1 0
................................................................AAGAGAGCTATCCGTCGACAGTCAA....................................................................................................... 25 0 1 21.00 21 6 14 1 0 0 0 0
...................................................................AGAGCTATCCGTCGACAGTC......................................................................................................... 20 0 1 21.00 21 9 8 1 0 0 0 3
................................................................AAGTGAGCTATCCGTCGACAGT.......................................................................................................... 22 1 1 21.00 21 2 3 2 14 0 0 0
................................................................AAGAGAGCTAACCGTCGACAGTC......................................................................................................... 23 1 1 21.00 21 8 12 1 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAGTCCT....................................................................................................... 25 2 2 20.50 41 5 31 3 0 0 1 1
............................................................................................................CTGTCATGGAATTGCTCTCTGT.............................................................. 22 1 2 20.50 41 41 0 0 0 0 0 0
............................................................................................................TTGTCATGGAATTGCTCTCTTT.............................................................. 22 1 2 20.50 41 38 2 1 0 0 0 0
................................................................AAGAGAGCTATCCGACGACAGTC......................................................................................................... 23 1 1 20.00 20 7 5 3 3 0 2 0
..............................................................................................................GTCCTGGAATTGCTCTCTTTG............................................................. 21 1 2 20.00 40 40 0 0 0 0 0 0
............................................................................................................CGGTCATGGAATTGCTCTCTTT.............................................................. 22 1 2 20.00 40 28 8 0 4 0 0 0
.............................................................................................................TGTCATGGATTTGCTCTCTTTG............................................................. 22 1 2 20.00 40 34 5 1 0 0 0 0
..............................................................TGAAGAGAGCTATCCGTCGACA............................................................................................................ 22 0 1 20.00 20 4 15 1 0 0 0 0
............................................................................................................CTGTCATAGAATTGCTCTCTTTG............................................................. 23 1 2 19.50 39 15 13 5 0 2 3 1
................................................................AAGAGAGCTATCCGTCGACAGTCTTT...................................................................................................... 26 3 1 19.00 19 2 16 1 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACACT.......................................................................................................... 22 1 1 19.00 19 9 7 3 0 0 0 0
.............................................................................................................TGTCATGGAATTGCTCTATTT.............................................................. 21 1 2 19.00 38 30 2 6 0 0 0 0
................................................................AAAAGAGCTATCCGTCGACAG........................................................................................................... 21 1 1 19.00 19 13 4 2 0 0 0 0
................................................................AAGAGAGCTATCCGTCGACAGCCT........................................................................................................ 24 2 1 19.00 19 1 16 1 0 0 0 1
................................................................AAGAGAGCTATCCGTAGACAGT.......................................................................................................... 22 1 1 19.00 19 0 6 11 0 2 0 0
.............................................................................................................TGTCATAGAATTGCTCTCTTTG............................................................. 22 1 2 19.00 38 30 1 4 0 3 0 0
.............................................................................................................TGTCATGGAATTTCTCTCTTT.............................................................. 21 1 2 19.00 38 32 4 2 0 0 0 0
.............................................................................................................TGTCATTGAATTGCTCTCTTTGT............................................................ 23 1 2 19.00 38 16 8 11 0 0 3 0
.............................................................................................................TGCCATGGAATTGCTCTCTTTGT............................................................ 23 1 2 18.50 37 7 7 3 13 1 6 0
............................................................................................................CTCTCATGGAATTGCTCTCTTTG............................................................. 23 1 2 18.50 37 19 13 2 2 0 1 0
.............................................................................................................TGTCATGGAATCTCTCTCTTT.............................................................. 21 2 2 18.00 36 35 0 1 0 0 0 0
................................................................AAGAGAACTATCCGTCGACAGT.......................................................................................................... 22 1 1 18.00 18 13 5 0 0 0 0 0
............................................................................................................CTGGCATGGAATTGCTCTCTTTG............................................................. 23 1 2 18.00 36 12 14 4 0 2 3 1
................................................................AAGAGAGCTATCCCTCGACAGT.......................................................................................................... 22 1 1 18.00 18 3 12 2 0 0 0 1
.............................................................................................................TGTCATGGAATTGCTCTCTTCG............................................................. 22 1 2 18.00 36 20 6 7 0 1 2 0
................................................................AAGAGAGCTATCCGTCTACA............................................................................................................ 20 1 1 18.00 18 0 13 5 0 0 0 0
............................................................................................................CTGTCACGGAATTGCTCTCTTTG............................................................. 23 1 2 17.50 35 20 9 6 0 0 0 0

Anti-sense strand reads

ACAGACAGGACACCACGATCGCGAGGTCGATAAGCGAAAGTCTAGGAGGTGCTTAACACTTTACTTCTCTCGATAGGCAGCTGTCAGTTCAATTATGGCTAACATTATGACAGTACCTTAACGAGAGAAACATATTGTAAGCTTTCCGCTGCTAATCTAATATAGCTTAACTACACGAATTAAAATCCGGTT

**********************************************.(((((.((...(((((((((((..(((((.((((((.....((((....))))....)))))))))))...)))))))))))...)))))))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 V107

male body		 V040

embryo
............CCACGATCGCGAGGTCGATAA............................................................................................................................................................... 21 0 1 1.00 1 1 0 0
............................................GGAGGTGCTTAACACTTTAC................................................................................................................................ 20 0 1 1.00 1 0 1 0
................................................................................................................................................TCCGCTGCTAATCTAATATAG........................... 21 0 1 1.00 1 1 0 0
....................................................................................................................................................................TCTTAACTAGACGAATTACA........ 20 3 19 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4845:17736365-17736556 + der-mir-281-2 Known_mirbase TG---TCTGTCCTGTGGTGCTAGCGCTCCAGCTAT-TCGCTTTC--------A---------GATCCTCCACGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AT----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTAGA--T-------TAT--ATCGAATTGAT----------------------------GTGCTT-A----ATTTTAGGCCAA
droYak3 2R:8893504-8893697 + dya-mir-281-2 Known_mirbase TG---TCTGTCCTGAGGCGCTAGCACTTCAGCTTT-CCGCTTTC--------A---------GATCCCCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AT----ACCAATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAGGCGACGATTAGA--T-------TATAGATCGAACTGGT----------------------------GTGCTT-A----ATTTTAAGCCAA
droSec2 scaffold_1:5602704-5602897 - dse-mir-281-2 Known_mirbase TG---TCCGTTG-A-GGTGCTAGC---CCAGCTTT-CCACTTTC--------A---------GATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AG----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATA--AGATCGAATTA--ATCGAATTGGT----------------------------GTGCTT-A----ATTTTAAGCCAA
droSim2 2r:8762280-8762473 - dsi_270 confident TG---TCCGTTG-A-GGTGCTAGC---CCAGCTTT-CCACTTTC--------A---------GATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AG----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATT--AGATCGAATTA--ATCGAATTGGT----------------------------GTGCTT-A----ATTTTAAGCCAA
dm3 chr2R:8057601-8057794 - dme-mir-281-2 Known_mirbase TG---TCCGTTG-A-GGTGTTAGC---TTAGATTT-CCGCTTTC--------A---------GATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AG----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATA--AGATCGAATGA--ATCGAATTGGA----------------------------GTGCTT-A----ATTTTAAGCCAA
droEug1 scf7180000409462:405930-406109 + TG---TTTGTTG-A-GGTGATACTACTC---------CAGTTCC--------A---------GATCCTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTGAAT----ACTGATTATAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGATG--AT----------------ATCAGT----------------------------GTGCTT-AACTGGTTTATAACAAA
droBia1 scf7180000302292:873767-873946 - TGCTGTCTGTTG-A-GGTGCTCCGGCTC---------CTGCTCC--------T---------GATCCTCAGCGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGAT---------------------ATCGGT----------------------------GTGCTCTTGCTAGTTCAAAGCAAA
droTak1 scf7180000415260:184296-184473 + TG---TCTGTTG-A-GGTGAT------C---------CTGCTCC--------T---------GATCCACCGCGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGATATAT-------TGA------TATCGGT----------------------------GTGCTT-AACTAGTTTAAAGCAAA
droEle1 scf7180000491214:3592719-3592896 - TG---TCTGTCG-A-GGTGTTTT-----------CT------CAATCCC---AAAG------GACTTCCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTTCA--AGA-----------------CAGT----------------------------GTGCTT-AACTAGTTTAAAGCAAA
droRho1 scf7180000779932:497213-497387 - TG---TCTGTTG-A-GGTGAA----T--------CT------CAGTCCG---AAAG------GACTCTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATCGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATATC---------------------AACGGT----------------------------GTGCTT-AACTCGATTAAAGCATA
droFic1 scf7180000453809:453466-453639 - TG---TCTGTTA-A-GGTGGT-------------CT------CGATCCC---AAAG------GACTCTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATAGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGAT---------------------ATTGGT----------------------------GTGCTT-AGCTTGTTTAAGGCAAA
droKik1 scf7180000302367:392649-392798 + TG---TCTGTTT-C-GGTGCTAT-------------------------------------------CTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----GCAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGACAAT---------------------ATCCGT----------------------------GTTCAT----------GAGGCAAA
droAna3 scaffold_13266:2568904-2569072 + dan-mir-281-2 Known_mirbase TG---TCTGTTA-T-GGC--------T---------------CCGGCCG---CAAG------GATACTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AAAC--ACGGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGAT------------------------ATCGGT----------------------------GTGCTT-ATCTGGTTTTAAGCTAA
droBip1 scf7180000396759:1630183-1630350 + TG---TCTGTTCTC---------GGCTC---------CGGCCCC--------A-AG------GATACTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACGGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGAT------------------------ATCGGT----------------------------GTGCTT-ATATGGTTTTAAGCTAA
dp5 3:418189-418348 - dps-mir-281-2 Known_mirbase TG---TCTGTCGTC---------CCCT---------CCACTTTT------------CTGTATAATACTGAACGAATAGTGAAATAAAGAGAGCTATCCGTCGACAGTCAAGTTA-A-----TCAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGACA--------------------------CAT----------------------------GTGCAT-A----GTTT----CGTA
droPer2 scaffold_2:605086-605245 - dpe-mir-281-2 Known_mirbase TG---TCTGTCGTC---------CCCT---------CCCCTTTT------------CTGTATAATACTGAACGAATAGTGAAATAAAGAGAGCTATCCGTCGACAGTCAAGTTA-A-----TCAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGACA--------------------------CAT----------------------------GTGCAT-A----GTTT----CGTA
droWil2 scf2_1100000004954:3242035-3242216 + dwi-mir-281-2 Known_mirbase TA---TTTTTTA---GGC----CTGCCC---------CTGCACA--------A---------AATTGCATCCGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCCAGTTTAATACATCCGAATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGGTTTTA--C-------TAA--CTTGAATGGCT----------------------------TTGGGA-A----AATAAAAGAAAA
droVir3 scaffold_12875:19830077-19830261 + dvi-mir-281-2 Known_mirbase AT-TGTCCTTTG----GCTTT-------------TT------CAAGCTAACCA---------AAC---TTGCGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCAAGCTA--T----ACAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGACTTTA--T-------------------ACAT--A-------TACATATATCTTATCTTTATATTT-G----TTTGTCCACATA
droMoj3 scaffold_6496:6376016-6376193 - dmo-mir-281-2 Known_mirbase TG---TCTGCCT-A-TGTCCTTT---------------------GTCCC---TCA-------G---TTCTGCGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTATAT----ACATATTTTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGATAT--------------------------ATATGTATAAACTATATATATATTATCTATATGTT---------------CTTG
droGri2 scaffold_15245:18178351-18178530 + dgr-mir-281-2 Known_mirbase TT---TCAA------AGCTTT------GCGGCTTT-TAAGTTTC--------A--------CAACAAATTACGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTATAT----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGATATTT-AT--------AA------TATATAT----------------------------ATGTTT-AGTTGAT--TGTCCCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TG---TCTGTCCTGTGGTGCTAGCGCTCCAGCTAT-TCGCTTTC--------A---------GATCCTCCACGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AT----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTAGA--T-------TAT--ATCGAATTGAT----------------------------GTGCTT-A----ATTTTAGGCCAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23194217.0094217281642777761628545766528783
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22252150.5010430180776526522661968528628
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22147296.00472961578036429818428048256953
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23244392.008878450916106579570314204800393
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................21119930.0019930727828135341128711671
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................23212153.00243061438010530627477281344169
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2129273.50185471394410821540294670
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................2018940.0089402463457160503641
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2417479.0074791107332722531887795
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2226453.00129069280173811323931110
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2123251.006502637501011790
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2312363.0023634822141154728928
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2212237.0022372080221130175
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2111229.00122911881203170
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................2421207.00241494183136119212257
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2411149.0011494845755865012
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................2121095.50219114404130692420
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................232916.50183310024047106181160
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222876.00175211710514514480
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................191700.00700188242478197
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242690.00138061551566291055
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232638.001276633261335125318
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202623.001246920151294250
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222565.00113079202926235480
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202552.0011041094000910
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201517.00517508000810
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232465.0093052423159228860
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221388.00388103041256240
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231384.003848112218010216
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242330.506613801842172328
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242246.504932680211113990
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................221207.00207117060109110
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................202203.004063890101240
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202187.00374148010215100
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................242147.00294141568114200
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191136.00136131000500
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................211108.001088000015130
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241107.001073600051200
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................23199.0099800001630
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................18189.0089361004651
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21180.008067100714
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19278.501571071104620
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22277.501551230002750
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................20176.0076160005730
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23272.001446200033490
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23171.00711731022280
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22258.50117960001920
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................23158.0058190013413
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................23158.0058120014320
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21257.00114113000100
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................21254.00108910001340
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................23251.50103440108500
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25149.0049200002810
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23247.509585101350
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24145.0045230101641
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22243.5087720001230
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20143.004336000610
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21241.508375030500
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24241.008281000100
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................23237.007470000400
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23137.003735000110
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................22135.0035111012200
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18232.0064381002320
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24231.0062281113010
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19230.506161000000
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19229.005855000210
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19229.0058470001010
......................................................................................AGAGAGCTATCCGTCGACAGG...........................................................................................................................................................21127.002727000000
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22126.002626000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGTT.......................................................................................................25223.5047300001430
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................21123.0023130001000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................25123.002320001740
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................22221.5043150002620
........................................................................................................................................GTCATGGAATTGCTCTCTTTGA........................................................................................................22221.004242000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................25121.002160001410
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20121.00219000813
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................25220.504150013131
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................22120.002040001510
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................26119.001920001610
droYak3
TG---TCTGTCCTGAGGCGCTAGCACTTCAGCTTT-CCGCTTTC--------A---------GATCCCCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AT----ACCAATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAGGCGACGATTAGA--T-------TATAGATCGAACTGGT----------------------------GTGCTT-A----ATTTTAAGCCAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23178464.0078464251892329713261638390813147222036566
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22139788.00397881769310721223712514930684531535432
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23220164.004032871727062152271423154395380010
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22218680.003736011929080290140171365715600039
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................21115119.0015119789946871201849116219202630
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................2329358.50187177810624202835017436950931000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2416854.00685472417631122325783907113217
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2124269.00853886420604487919190000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2223531.5070633355311689266912270000
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................2013356.00335656414632042642122010214
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................2212657.002657200614588003450001
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2312160.00216081945330552381011211
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................2212008.002008197131100320000
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2211924.00192497176122204380000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................2321602.50320539136568210265210310000
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................2121338.002676691906102313255580000
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2121183.002366023460012170000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................241982.009821495642664321400412
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................211905.0090540855100090000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222522.501045090995261140000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................242497.5099524038811524142310010
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242495.009902057110794102640005
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................191493.004932581515025710001
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202484.0096887251804132000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242368.00736224245776172030000
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201331.003314326000010000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232304.506092381281127211390000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232276.0055243181084101980000
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202264.505290528000010000
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202263.0052644286110571730000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222251.0050203183013101580000
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231183.00183507110333420010
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................211180.001801711000260000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242167.003342324719531360000
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................191147.0014711920500030000
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................231127.001271124000020000
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191119.001190119000000000
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221103.001039458001400000
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21190.0090871600050000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................24171.00718261001350000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................24268.5013717214310460000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25168.0068132800001500012
.........................................................................................GAGCTATCCGTCGACAGT...........................................................................................................................................................18165.00655114000000000
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................20264.501290124100040000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24157.00572725000050000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22255.501111103210040000
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19254.0010810821040110000
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23145.0045045000000000
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22141.0041139000100000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22240.00800591002180000
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20136.00361115700030000
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................18135.0035125002160000
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................20134.00341460002120000
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18231.5063056200050000
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................23129.0029711800030000
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21228.5057049100070000
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19228.0056056000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCT.......................................................................................................24226.50530264003200000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................25126.002697220060000
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20125.0025122000020000
.....................................................................................AAGAGAGCTATCCGTCGACG.............................................................................................................................................................20125.0025220000030000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24225.00506142210160000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23224.00480252105150000
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19223.5047038000270000
..........................................................................................AGCTATCCGTCGACAGTC..........................................................................................................................................................18122.0022416200000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23120.002026800130000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................23220.0040039000010000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTC.......................................................................................................24219.503901018000100010
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23219.5039925200030000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22217.5035028100060000
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................19217.5035722300120000
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................23216.5033132000000000
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................23116.001666000040000
.........................................................................................GAGCTATCCGTCGACAGG...........................................................................................................................................................18115.0015150000000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTC..........................................................................................................22214.5029142400000000
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21214.5029028000010000
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................19114.0014410000000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24213.5027719000010000
.........................................................................................GAGCTATCCGTCGACAGTCT.........................................................................................................................................................20113.0013121000000000
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................21113.001364000030000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGA........................................................................................................22213.0026026000000000
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19113.0013012000010000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................26112.001230000090000
....................................................................................GAAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................24112.0012012000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCC.......................................................................................................24211.5023512200220000
.....................................................................................AAGAGAGCTATCCGTCGACAGTAT.........................................................................................................................................................24111.001141010130001
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19211.0022018000040000
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................19210.5021017010030000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................22210.0020017000030000
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................18110.001019000000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTA..........................................................................................................2229.5019115000030000
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................1829.5019116100010000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................2529.501937000090000
droSec2
TG---TCCGTTG-A-GGTGCTAGC---CCAGCTTT-CCACTTTC--------A---------GATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AG----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATA--AGATCGAATTA--ATCGAATTGGT----------------------------GTGCTT-A----ATTTTAAGCCAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23171949.0071949255553948039372977
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22163974.0063974192504153712081979
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22233847.5067695433491925732591830
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23230754.0061508315472157260422347
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................23221674.0043348199301835135521515
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................21112278.001227843047322123529
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................2018043.0080432359544824212
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2127428.501485787585525147427
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2415475.005475800426967339
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2225324.501064963443817140348
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2315321.0053211110381829364
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................2323193.00638621283805282171
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2211922.00192217821051916
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2121760.00352034496443
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................2321554.5031096151631166697
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2111413.00141313565016
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................2421342.002684110214217586
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................2221107.00221416764594039
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................2211043.001043142876223
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................212984.00196810068901854
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................241874.008743164685535
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242675.0013505437074159
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................191648.00648346270428
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222556.001112628437938
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232546.5010936224062045
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242543.5010875074737829
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202498.00996576388527
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242484.0096832831665259
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202356.507137011110
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201296.00296290510
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231295.0029599171421
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241261.002618616609
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202174.00348132200511
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................242173.003461141506616
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................221164.001641813565
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................201157.0015730117010
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191148.00148147100
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................202121.502432271411
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................231104.00104267323
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................23197.0097761911
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22195.009584902
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22294.501891622331
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................18191.0091701407
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................23177.0077363371
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21275.501511173130
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24265.00130279085
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20164.006459500
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21163.0063372501
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19262.501259019412
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21162.006254530
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22250.50101574103
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23250.00100474634
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25147.0047123401
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................23246.5093513831
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22244.5089582632
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21244.508989000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................21242.5085641182
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................22142.0042132621
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................25237.5075115725
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................23236.007264710
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23234.006858532
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................25134.003423101
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20130.003021801
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................22129.002972101
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23129.002926300
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCC.......................................................................................................24228.0056272270
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................25125.002512841
....................................................................................GAAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................24123.002323000
......................................................................................AGAGAGCTATCCGTCGACAGG...........................................................................................................................................................21123.002323000
.........................................................................................................................................TCATGGAATTGCTCTCTTTGTA.......................................................................................................22222.504543371
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19222.504542111
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19222.504535550
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24222.004441300
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................22221.50431319101
.......................................................................................................................................TGTCATGGAATTGCTCTCTTGT.........................................................................................................22221.5043161890
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23121.002117400
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................21121.002181210
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24120.002015500
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19120.002018200
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................23219.503936210
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................21119.001981001
......................................................................................AGAGAGCTATCCGTCGACAGA...........................................................................................................................................................21119.001918100
...................................................................................................................................ATACTGTCATGGAATTGCTCT..............................................................................................................21119.001931501
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCT.......................................................................................................24218.5037231310
........................................................................................................................................GTCATGGAATTGCTCTCTTTGA........................................................................................................22218.503734300
droSim2
TG---TCCGTTG-A-GGTGCTAGC---CCAGCTTT-CCACTTTC--------A---------GATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AG----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATT--AGATCGAATTA--ATCGAATTGGT----------------------------GTGCTT-A----ATTTTAAGCCAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................231348108.003481085041019317033697263100467081198738041761105510981501460308139
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................221329797.003297975539021663021421147400213555748333215678372331421591131153
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................211112374.0011237418247765243846488007985160818158104823820505114
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................22135658.0035658515927135335600040002200000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23229378.005875614396099244389223075425185542348322501484106005002
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................22122339.0022339530715284173520051400100000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22215871.503174349922814201507847480498510853495195995442715000
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................20111957.0011957177776691361860013261392669911746231001
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................23110483.0010483143976445326900570631083137277001
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2416556.0065564001453419800091760714568391622559136012
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................2326150.50123011626453073248411383164617561745769339908000
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................1915671.0056711248414869210010411271028104000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2415650.005650475212519381002083318100599963149103
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2223637.507275182919493020137451791361453214658327001
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2122644.00528852288335324588231649171992132104000
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................2312240.00224025782696140040023723213719589000
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................1911873.0018732951191348100130131002000
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2211614.001614375686103200001256332119415000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................2421428.002856260153524179004505910538457128215
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................2111379.0013793699555200010001001000
.........................................................................................GAGCTATCCGTCGACAGT...........................................................................................................................................................1811067.001067177747117000102122000000
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................182996.0019921229731620295000125000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................251974.00974939128120010883290200772206000
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................211962.0096228347329119002981060004100
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................212886.00177223457746424741022951564617107000
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................192659.001318641523216837154903249000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202655.00131053166242276291223679730000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................232622.001244742788241300151297859641411000
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................212621.50124315012114024824200000
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202535.50107118447313038118246091887002000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242430.5086119242866134002112122300000
.....................................................................................AAGAGAGCTATCCGTCGACG.............................................................................................................................................................201394.0039448336810000001000000
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................201362.00362752423000371011002000
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221315.003151668111300116242215180012000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232314.0062817805232002103618173802000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................241293.00293431695010098921100000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232291.00582531021223600101331075410000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................232260.505219135190016660181643100000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAAA.......................................................................................................................................................261250.0025003210006632763417100000
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................231209.00209151146530051010005000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTAA........................................................................................................242191.5038324103004829195902000000
.....................................................................................AAGAGAGCTATCCGTC.................................................................................................................................................................161191.001910000001000190000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242181.0036286216566315891121107400000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222178.50357260265519310116300000
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................211173.00173299911000921164011000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................242167.00334144243371243610713920600000
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201163.0016339811330051210000000
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................221156.00156206882002912742103000
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................192150.503012343331883520013000000
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................181146.00146244519004433512000000
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................201139.00139176329200532018000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222136.00272320018200327978400000
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................231134.0013424662600131282019000
.........................................................................................GAGCTATCCGTCGACAGG...........................................................................................................................................................181133.00133191031000000001000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241130.0013019682500302000112000
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202119.002380102315010000000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................231119.00119155172002711002202000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242117.50235225228470047218152200000
......................................................................................AGAGAGCTATCCGTCGACAGG...........................................................................................................................................................211109.001094857310000000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTAA......................................................................................................252105.00210022300141072998000000
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................191102.00102185410100322012000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23286.50173188750160000002000000
..........................................................................................AGCTATCCGTCGACAGTC..........................................................................................................................................................18184.00841744700062017000000
.........................................................................................GAGCTATCCGTCGACAGC...........................................................................................................................................................18171.00711649600000000000000
.........................................................................................GAGCTATCCGTCGACAGTCA.........................................................................................................................................................20165.00659311500000109000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24263.5012723801670010000000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAAAA......................................................................................................................................................27163.006300140016181743000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22260.001201502200151034258000000
......................................................................................AGAGAGCTATCCGTCGACAGC...........................................................................................................................................................21154.00542823300000000000000
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21153.0053434170051010000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25150.0050534020080100000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTAA........................................................................................................23249.509901360012641281100000
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................20249.5099150872000031000000
.....................................................................................AAGAGAGCTATCCGTCG................................................................................................................................................................17146.0046000000801037000000
...................................................................................TGAAGAGAGCTATCCGTCGAC..............................................................................................................................................................21146.00461626000021100000000
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23145.004545770044660002000
......................................................................................................................................CTGTCATGGAATTGCTCTCC............................................................................................................20244.508922481900000000000000
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21144.0044617750033101001000
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................23142.00427801000123100100000
...........................................................................................GCTATCCGTCGACAGTC..........................................................................................................................................................17140.0040000000101137000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24238.507792012600164622000000
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22136.00361117120010310000000
...................................................................................................................................ATACTGTCATGGAATTGCTCTC.............................................................................................................22135.0035618000022041020000
.........................................................................................GAGCTATCCGTCGACAGTCT.........................................................................................................................................................20134.0034524400000001000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTAT.........................................................................................................................................................24129.00291312000020200000000
.....................................................................................AAGAGAGCTATCCGTCGACC.............................................................................................................................................................20128.0028818100010000000000
.........................................................................................GAGCTATCCGTCGACAGTT..........................................................................................................................................................19127.0027423000000000000000
......................................................................................................................................CTGTCATGGAATTGCTCT..............................................................................................................18227.0054010236513015000000
....................................................................................GAAGAGAGCTATCCGTCGACAG............................................................................................................................................................22126.0026315310031000000000
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20126.0026116150003000000000
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18225.0050131200210039100000
.......................................................................................................................................TGTCATGGAATTGCTCT..............................................................................................................17224.5049000000201145000000
.....................................................................................AAGAGAGCTATCCGTCGACAAC...........................................................................................................................................................22124.0024617100000000000000
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................19122.0022510160000000000000
............................................................................................................AAGTTA-AG----ACCGATTGTAATA................................................................................................................................21122.0022011000115011002000
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................19221.0042000110000040000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAT........................................................................................................................................................25121.002126000023611000000
....................................................................................GAAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................23121.0021111810000000000000
...........................................................................................GCTATCCGTCGACAGT...........................................................................................................................................................16121.0021000000000021000000
..............................................................................................................................................GAATTGCTCTCTTTGT........................................................................................................16219.5039000000000138000000
.........................................................................................................................................TCATGGAATTGCTCTCTTTGTA.......................................................................................................22219.50391011230161220100000
dm3
TG---TCCGTTG-A-GGTGTTAGC---TTAGATTT-CCGCTTTC--------A---------GATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AG----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATA--AGATCGAATGA--ATCGAATTGGA----------------------------GTGCTT-A----ATTTTAAGCCAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................231652605.006526050000720402361219030000095142395071300100000001851721755810250307308148155198250187151367296187690002671851700000000000000000518452494664733922221447819312123371986503118141310142486561708542825623349928916233297649195123508183001526111682444128614282892363511352886885015763242507428543685321000006705033351852967103742039549713271115782752626113716531328109341169244918683613933521181625283939721540682411178046811649476351881919714254208157141518622079215343161742569270122741307150323239941626800163811021173219937891534203831591224246773132322654452577352723907010187111575196754549997455726685643846129475133002743751923110719291477128321401343194054193093208211320527717279410923109524641715715135321773240111832496322055710787531892881161643461843443836894123333513916250963540231448995157280944106258
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................221324442.003244420000221232137050110200338670908117009961811022786690284616126138517199736650149165773700076091654000000000000000003939344706042222284621890265695427165125300873023346124334733618143219010637190461884215214900515341615103731022317816314610625822823016810482182153151540000072545165732834501870017122910110025014382152332521505514748880145511042244271363122926126618610069312085026261551011175676131551400113419847449230065541253139981469279526185905000414375363981162651511282003210311847111716712419243710486749262952441724333721623214512221319722640219715180771371491274103146352482086072230891823971299926325712184575625117177367802124211535276125091161874632197713439128511925116164094295188877811114121264514057594898123050928
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................232232419.50464839001052210014110404002008616332470794014121112100032923182349621998279484239125213270166368554333235840155017219614000000000000000001413181324494626192214511619171392733687917698138141101152036204466846296011340313528119113146204710763812002816283341171594369718295302673560639421260263868170333401202635381239263143050218102282301211815276164787791343552666106321913146218782016749369793537321122071694146220842253914110915781700232910298941021214072763728326641855160673145033632002233166603049430281397428174925098205349915754532655638546599235452642321531535998116311018680315017540277819464195913350118266199191222028145811202089205292695126358134334314191136154454136001200322616041131719820442549005208681024144344388923480864727958739173715139237971365621051200022381373861833346599
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................222173573.5034714700101203201154806003201402371713909112008137295004030836927113516949435618149163215173208338821435206924001001204800000000000000000172413155882116264322157022249122113113651467269127191751062024964137100105754351141911323501212463426549394002030402930501132749535565415545623730708510224826249469622700000551483253271812130163111703259146018852025241263315441048626461627177924144614899650410802301018081943115702427894104711092295512222120901555422251451072207154310769644202391300122211521195617030675622125617440111862207362750121533032535320637099166136125448872234413205218811968233715563176512344482041483110998167761585426444649554449482435393319169672781434475731901343699722030095864871165772210279149662192752651392102611001171117471107681241498861321367662931165427
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................212121601.502432030000529010360403200107512923121016603784177102999826245453118519844152934746128255119502611910203925100000000000000000010221817556177114712134713202161255457613839610120889210251625206311087455151647531174321602221611692577500161819281444057372281228206214304337247232125511619428513401000447736252021328601010014118978852680350359449392437776623471438129019004830275643100173631485227949266195344849266642194106357811146512213306541320722504673919104203112300016218719446721258129311789124347161112232814273122202035706561487144272412516809137873411222777665043482397142219063247158472710415772179217913373821127223919162986691311960788915142468356270306310015681461181401606096101429314841978775479206716192082113765621950
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................211109941.001099410000070110002000000030471230026106336410262432619132016484033292012222156182390004456612800000000000000000871250110425520511200105218400133991808668237090155037511055140404911555531100279576694146657251633693862462400000801751011341340594134776350948126100138901431724362855562900121821537328101010291343244651792717235211684508956921261064811209247384162127146401591990044630320181430263357340110217823413227137814935129179346373804973693867345578293068263104167303342688503882655922374843515752031302621315137936206346022839109482026565210501493512935850339740654163573711514312811113
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................23299705.00199410200011536756825736612106101122056190114502411921801189615710356823221632594621321241502164522981584901006345831580000000000000000068544644913616899686108711697110555356399269720271144438085624625013111918518911617618140114260518984117323191121541052181630020472639326002319420524514725868235165326113401923815411910100010301944461715523401690024724241243199221691688241661743814318366542214636131163753434412131114019329460273768105147681356330676876237131989484432931061158597410498300613200224618310107418125401532585935159847113222140707128516246266249821509819160811039735736100155831110752794362614930521924129734744556748900698935813316214241519273919172926944618220445233132834140826624120301202622224589272215155161147563887780033754652480445362676158115283109
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................24142035.004203500000010000000000000860001500000000189645461231410585625200000000000000000000000100301100000014000057000104100020100000276010021512000000002010092016151027191371122020156000002001601415050014919025040002044041515371116600014126791722001137760021007152542247811093172180297314228136801611010081405882413114295163230111621201014200300233824102481425334242024216435241306154596215440391808715132522512338037072087482011478518123720289269172157421853333691813367214301909385635891304230911594
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.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................211260.0026000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000020000110001000110000001000000000000100000000000000000000000130000000000500000010000000000000000140000001010400011000100010000300011010101000000320000000000000000000000000020000011104464130220010000000020000200102001011000000000007133553000035
.....................................................................................AAGAGAGCTATCCGTCGACAGCT..........................................................................................................................................................231258.002580000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000001000000000000100000000201000011000000000000000000003000000001000000020020000020010000000000000000000004633244432310100020010011032145806600010000000000000671023000010
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCC.......................................................................................................242254.505090000000000000000000000000000000000000011032000003420100000000000000000000000000000000000000000095000000001003000007000000000000100000000000000004220050000000000000000000000000000100080009503000706000000400000000005101720432685230000000011020000010000010000000000000000002143611342400000000032091013814111612267051021170000020000062171318512100010
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202251.00502000001000000000000000010000000000000000000000000000000000000000000000000000000000000000000200001300010010000000000000000000100011000000000000000110103000000000000000130100030202040000001185420005046000003100000000003231300570502000000000001000000003000000000000000000010749225515380000020101255194949110241500081300000000010343318131215100000
..........................................................................................AGCTATCCGTCGACAGTC..........................................................................................................................................................181249.002490000000000000000000021000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000200001008050000205652110300000000000015400000000000000001000000000000000000000000000000000136829180140000000020100000100102201001000000000006120335000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTAA........................................................................................................242242.5048500000001000000000000010000000000000000001010000012000000000000000000000000000000004002000000000000000000000000000000100000000000000000000001150131706032020000000000022000000000000000000005010000020000001600000000000002031797200000000100100000000000000000000000000000026663237725140000021032640206288630000001946000000000008363536000010
...................................................................................................................................ATACTGTCATGGAATTGCTCTC.............................................................................................................221233.0023300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002020000000010040000000000000000000000000000100000000000000000000000000000000001000000020000000010000000000000000000112220361000000000000000000100000000000000000000100061728171400000211000100221429099000910000000001001643413767000020
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................191233.002330000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000004000000000000000010000000000000000000000000000000000001001000000000000022700000502000001000000000000049000000000000100000000000000000000000000000000000001513607053120000000000000000200000100003000000000002013100000000
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................192229.504590000000000000000000000000000210000000000000010000000000032100000000000000000010000000000000000025100000000000000000000000100025005316510000032010000000010000000000000001101100010201020000007000000401002000000000000002020902170002100120000000000003303010100000000000000000342100030200012341221024220370750003110000000000035145298915400000
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................211228.0022800000000001000000000200000000000000000001000000100100000000000000000000000000010000000000000000010000010000000000000000000000000000000000000100000000000000000000000011000002000002000010111120001030000000000000000000660020270040017000010200000010100000000000000000000033018425040000011010031060435414800049000000000009476014000000
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................211225.00225000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000001000000000000100000002000000000000000030000210000000000001103100020500000020000000000019300010200000001000002000003001000000000000000000000223464141600000202010740501065010140001200000000000144185614100000
droEug1
TG---TTTGTTG-A-GGTGATACTACTC---------CAGTTCC--------A---------GATCCTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTGAAT----ACTGATTATAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGATG--AT----------------ATCAGT----------------------------GTGCTT-AACTGGTTTATAACAAASizeHit CountTotal NormTotal
No Reads
droBia1
TGCTGTCTGTTG-A-GGTGCTCCGGCTC---------CTGCTCC--------T---------GATCCTCAGCGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGAT---------------------ATCGGT----------------------------GTGCTCTTGCTAGTTCAAAGCAAASizeHit CountTotal NormTotal
No Reads
droTak1
TG---TCTGTTG-A-GGTGAT------C---------CTGCTCC--------T---------GATCCACCGCGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGATATAT-------TGA------TATCGGT----------------------------GTGCTT-AACTAGTTTAAAGCAAASizeHit CountTotal NormTotal
No Reads
droEle1
TG---TCTGTCG-A-GGTGTTTT-----------CT------CAATCCC---AAAG------GACTTCCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTTCA--AGA-----------------CAGT----------------------------GTGCTT-AACTAGTTTAAAGCAAASizeHit CountTotal NormTotal
No Reads
droRho1
TG---TCTGTTG-A-GGTGAA----T--------CT------CAGTCCG---AAAG------GACTCTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATCGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATATC---------------------AACGGT----------------------------GTGCTT-AACTCGATTAAAGCATASizeHit CountTotal NormTotal
No Reads
droFic1
TG---TCTGTTA-A-GGTGGT-------------CT------CGATCCC---AAAG------GACTCTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACTGATAGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATGAT---------------------ATTGGT----------------------------GTGCTT-AGCTTGTTTAAGGCAAASizeHit CountTotal NormTotal
No Reads
droKik1
TG---TCTGTTT-C-GGTGCTAT-------------------------------------------CTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----GCAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGACAAT---------------------ATCCGT----------------------------GTTCAT----------GAGGCAAASizeHit CountTotal NormTotal
No Reads
droAna3
TG---TCTGTTA-T-GGC--------T---------------CCGGCCG---CAAG------GATACTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AAAC--ACGGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGAT------------------------ATCGGT----------------------------GTGCTT-ATCTGGTTTTAAGCTAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23156991.00569913632324661542104128163128
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22147993.004799325890393711331191061202
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22238204.5076409587416528118315658734
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23225931.005186234652166112108714920925
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................20121781.002178112952844338248136
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................21120491.00204911556220124354008454
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................24118428.00184288984371246559972933
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................23213431.002686218715267977966448539
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................21211094.5022189169611213194658238
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2316246.0062463075621812051931
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2225180.001036078812411732179102
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................1913269.0032692275207689818
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2212702.0027022670023189
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2122698.0053965333103563
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................2122673.005346366614070155739
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2111996.0019961975100182
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................2221675.5033512348458384467
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................2021311.0026222025203054520
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................2321310.00262018680124666133
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2411217.00121794081312298
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................2321202.002404118687275102529
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................2011040.001040103400123
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222926.501853166522515326
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191926.0092692400020
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242891.0017821190714549742
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202837.501675787023783910
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241784.00784498002222143
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202763.501527151900260
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242720.001440937203545016
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................181675.006756281124201
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................231671.00671653001143
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................201557.0055725900727219
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232526.5010535721824273175
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221386.00386186101517113
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................242333.006664443002015814
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................251323.00323255107528
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................221241.0024123800111
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................221240.0024037123023570
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231213.0021312010105824
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242207.004143045055545
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................242192.5038525400101129
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................192188.003763111112492
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................202184.5036935900190
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................181170.0017017000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................251144.00144390066435
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................211126.00126370017711
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................261111.00111490034712
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................211105.001059660111
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................241102.0010289001120
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22299.00198156003363
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................21193.009342001491
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21291.5018318200010
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20187.00878200050
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................22182.00826800590
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19281.0016216200000
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21273.00146130100141
.....................................................................................AAGAGAGCTATCCGTCGTT..............................................................................................................................................................19170.007049000192
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23167.00676700000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGTT.......................................................................................................25266.0013285003413
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19255.5011110900020
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24254.5010941104621
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22253.5010710210040
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................23251.001029800040
......................................................................................AGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................23144.00444400000
.....................................................................................AAGAGAGCTATCCGTCGAA..............................................................................................................................................................19144.004422001210
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22244.008866004180
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23240.508154105201
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19140.00403900010
.....................................................................................AAGAGAGCTATCCGTCGAT..............................................................................................................................................................19140.004021000190
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................21139.003915006180
.....................................................................................AAGAGAGCTATCCGTCGACAGTAT.........................................................................................................................................................24139.0039120011214
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................25139.003924203100
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19237.00746700061
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23136.00362310471
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................22136.003616011162
.......................................................................................................................................TGTCATGGAATTGCTCTCTTA..........................................................................................................21233.506718000472
.......................................................................................GAGAGCTATCCGTCGACA.............................................................................................................................................................18133.00333100020
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................23132.003213000163
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................21229.505923000351
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23227.50555200030
.......................................................................................GAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................22127.00271910034
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................22226.00524400062
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20125.00252110030
......................................................................................................................................CTGTCATGGAATTGCTCTCTTA..........................................................................................................22225.005032000180
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................19124.00242000130
......................................................................................AGAGAGCTATCCGTCGACT.............................................................................................................................................................19124.00242400000
droBip1
TG---TCTGTTCTC---------GGCTC---------CGGCCCC--------A-AG------GATACTCCACGAATAGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTA-AA----ACGGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGAT------------------------ATCGGT----------------------------GTGCTT-ATATGGTTTTAAGCTAASizeHit CountTotal NormTotal
No Reads
dp5
TG---TCTGTCGTC---------CCCT---------CCACTTTT------------CTGTATAATACTGAACGAATAGTGAAATAAAGAGAGCTATCCGTCGACAGTCAAGTTA-A-----TCAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGACA--------------------------CAT----------------------------GTGCAT-A----GTTT----CGTASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23177177.00771775640478854605194783814261477529293
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22262664.501253294310881990883301547143839128
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22162661.0062661122673752663347930599810329296827
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23240113.0080226626418225213380413641335820429
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................21123705.00237053209164802942253023540184614
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................23218127.503625511248455361645771323874515345
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................21212215.0024430122030312525232378411181
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................24110312.00103121756557321348311352742120
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................20110217.0010217394788461721511763000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2229160.00183204415898287710132208910284
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2315408.0054085502920134111521817031
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2124721.50944309401001041000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2413989.003989792042306115421714060
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2213605.003605133529665244000
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................2123122.506245165325429372791050
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2112905.002905162869012017000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................2321647.503295621661526714107771480
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................2221371.50274302319601529374000
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................2021276.0025523218534123331020
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................2221237.0024741191916357482500
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................2011235.0012352122800005000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................2321080.502161317754181229314060
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2411078.0010783082584219188200
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................1911049.0010491128233311097000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232893.00178611315633051380000
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202883.5017670176100006000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242774.50154901090118840389210
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................221727.007273533118010811143000
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191579.00579157800000000
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202461.50923571509012182000
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................231456.00456045102003000
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231448.0044845312532571140
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242417.008340630157615160010
....................................................................................AAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................231339.00339492081616354020
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................221301.003012751610126000
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................202283.00566055700009000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242277.505554475358652020
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241238.0023811179010245000
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................201237.0023728141010067000
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................221219.00219121600002000
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................192213.004260409110411000
....................................................................................AAAGAGAGCTATCCGTCGACAG............................................................................................................................................................221186.0018613137101232000
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................231176.00176017000006000
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221165.001654116320434020
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................211147.00147113813004000
....................................................................................AAAGAGAGCTATCCGTCGACA.............................................................................................................................................................211141.001412102010234000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................242123.002460146818576020
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................181115.00115210100039000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................251112.00112063020047000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................222110.00220021011017000
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................201108.00108210500001000
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19296.50193019300000000
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21283.50167016010006000
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19279.50159015700002000
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18273.00146113600106020
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21273.00146014600000000
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23172.007207200000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22264.00128082051237010
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................19163.0063263600010000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGA........................................................................................................22255.50111011000001000
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................18154.005405400000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22253.50107086010216110
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19252.50105010400001000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23252.0010419520006000
.........................................................................................GAGCTATCCGTCGACAGT...........................................................................................................................................................18151.0051371300000010
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19142.004204100010000
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23140.004012741313000
....................................................................................AAAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................24138.003803500012000
.......................................................................................GAGAGCTATCCGTCGACA.............................................................................................................................................................18133.003303200001000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24232.506506400001000
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20132.003222401005000
....................................................................................AAAGAGAGCTATCCGTCGAC..............................................................................................................................................................20129.002912210005000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTC.......................................................................................................24229.0058036242311000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................23228.505705600001000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25127.002701600029000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23226.0052035010112300
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................23224.5049032101312000
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................19224.004814401002000
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................21124.002441600004000
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................19123.002311802011000
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................21122.00227500046000
....................................................................................AAAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................24122.002211311006000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................25121.002111101008000
........................................................................................................................................GTCATGGAATTGCTCTCT............................................................................................................18221.004204200000000
.....................................................................................................................................ACTGTCATGGAATTGCTCTCTTTG.........................................................................................................24221.004204000002000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................25120.002011102015000
..........................................................................................................................................CATGGAATTGCTCTCTTTGT........................................................................................................20216.503303200001000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24216.5033015350010000
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................19216.503302601105000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTC..........................................................................................................22216.5033013711002000
......................................................................................AGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................23116.001601600000000
...........................................................................................................CAAGTTA-A-----TCAGATTGTAATAC...............................................................................................................................22116.001601140010000
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................18215.503122710001000
.......................................................................................GAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................22115.001501500000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24115.00153900021000
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21115.001511001012000
......................................................................................AGAGAGCTATCCGTCGACT.............................................................................................................................................................19115.001501500000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................21214.0028016000011100
.......................................................................................................................................TGTCATGGAATTGCTCTCTTC..........................................................................................................21214.002801228015000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCC........................................................................................................................................................25114.00140902003000
..........................................................................................................................................CATGGAATTGCTCTCTTT..........................................................................................................18213.502702700000000
........................................................................................AGAGCTATCCGTCGACAG............................................................................................................................................................18113.001311100001000
......................................................................................AGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................22113.001301300000000
.......................................................................................GAGAGCTATCCGTCGACAGTT..........................................................................................................................................................21112.001201000002000
.....................................................................................AAGAGAGCTATCCGTCGACTT............................................................................................................................................................21112.001211100000000
....................................................................................AAAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................23112.00121081110000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGTT.......................................................................................................25211.502301910003000
.....................................................................................AAGAGAGCTATCCGTCGTT..............................................................................................................................................................19111.001101000001000
droPer2
TG---TCTGTCGTC---------CCCT---------CCCCTTTT------------CTGTATAATACTGAACGAATAGTGAAATAAAGAGAGCTATCCGTCGACAGTCAAGTTA-A-----TCAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGACA--------------------------CAT----------------------------GTGCAT-A----GTTT----CGTASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22127405.0027405104217812103146678856
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23126918.00269181131982261512911776754
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22217180.5034361892740599318846366
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23211445.0022890452157721853381106033
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................2118318.00831816723067955263489
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................2328192.00163847792541513141026486
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2123130.00626014868352161320
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................2012479.00247973128122341096
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2312133.002133201369910111533
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2222068.50413725348263214578
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2411699.0016996433161341281
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................2411400.00140022762652212508
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2121238.5024770238800089
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................2221103.502207085141451333
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................2211088.0010881059212204
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................212803.5016071513183120259
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................221631.006313557203219
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................211598.00598145760017
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................221580.00580551702119
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................232497.50995135585137399
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222342.006840538183134
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................191339.00339112111200114
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202293.505873469042109
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232281.5056302549134283
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242264.505296279192232
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232253.00506040532294
....................................................................................AAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................231234.002341254111165
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................241226.002263312721162
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201225.0022522210002
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202223.0044604400006
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242150.003001020154080
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202141.002823215710092
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221102.0010232611170
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................19179.00790790000
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................20271.5014301380104
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................19170.00706430003
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................23166.006673101027
....................................................................................AAAGAGAGCTATCCGTCGACAG............................................................................................................................................................22165.0065221800025
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................24259.5011958011230
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................24157.005712310032
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19253.00106117900016
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................24249.009883921147
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................20142.004201100031
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................23142.00420410001
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22238.507705500022
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21137.00375290102
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................23133.00330310002
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22132.00321270004
.........................................................................................GAGCTATCCGTCGACAGT...........................................................................................................................................................18132.00323110000
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21231.00620610001
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20130.003010190001
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................25129.00292900018
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21228.00560490007
....................................................................................AAAGAGAGCTATCCGTCGACA.............................................................................................................................................................21128.002811100016
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19224.00480470001
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22223.00460370009
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................19123.00231390001
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................21122.00222100001
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22217.50350260207
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24116.00161140010
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19116.00160130003
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................18116.0016180007
..........................................................................................AGCTATCCGTCGACAGTC..........................................................................................................................................................18115.00151410000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23214.50295210003
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20114.0014750002
........................................................................................................................................GTCATGGAATTGCTCTCTTTGA........................................................................................................22213.50270180009
....................................................................................AAAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................24111.0011050006
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23110.0010150103
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21110.0010150004
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19210.00200190001
....................................................................................AAAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................24110.0010060004
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................2429.50192170000
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................1829.50190120007
....................................................................................AAAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................2319.009900000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................2519.009010008
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................1928.50170170000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................2328.50170130004
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2318.008080000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................2518.008020006
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................2228.0016090016
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................2127.5015070008
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................2427.0014150008
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................2617.007010006
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................1926.50133100000
.....................................................................................AAGAGAGCTATCCGTCGACG.............................................................................................................................................................2016.006420000
.........................................................................................GAGCTATCCGTCGACAGG...........................................................................................................................................................1816.006600000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTC.........................................................................................................................................................2416.006120003
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTG.......................................................................................................2426.00120110100
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................2516.006240000
......................................................................................................................................CTGTCATGGAATTGCTCT..............................................................................................................1826.0012071004
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................1816.006060000
.....................................................................................................................................ACTGTCATGGAATTGCTCTCTTTG.........................................................................................................2425.0010090001
......................................................................................AGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................2215.005050000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTGT.........................................................................................................2225.0010030007
....................................................................................AAAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................2315.005500000
droWil2
TA---TTTTTTA---GGC----CTGCCC---------CTGCACA--------A---------AATTGCATCCGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCCAGTTTAATACATCCGAATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGGTTTTA--C-------TAA--CTTGAATGGCT----------------------------TTGGGA-A----AATAAAAGAAAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23148916.004891619737967590799674751
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22139758.003975824867579265312315253
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................21122318.0022318129125158355760586
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23220047.004009410462011490869194654
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22213333.50266671811809565501689152
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................2327479.501495993633055232896117
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................2016264.0062641112229527745231
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2125795.5011591237825320147369
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2223678.007356755720135214168
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2413307.0033074176681627434161
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................2412656.00265673791783914023
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................2212215.00221522048210
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................2211784.001784174862343
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2311637.0016377132945098140
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................1911153.00115354335025244
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................2321046.50209355747113914111
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................212814.5016290156850110
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202798.501597321066464287
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................212788.0015765811103861012
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................221751.00751576758101
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................211475.0047552408861
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222471.0094205852031477
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242416.0083229472249748
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201367.003675362000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232355.507115528128482
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202319.006380634301
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222297.505951408174102
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................241285.002857711558314
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................211216.002162075400
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242207.504159210137554
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232186.0037271601225231
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202181.003626917210966
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242172.0034421187416431
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191150.001500148200
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................191139.001391299100
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231124.00124533018212
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221121.001216565531
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCA........................................................................................................................................................251115.0011529523202
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................181104.00104591611
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19298.00196141572104
.........................................................................................GAGCTATCCGTCGACAGT...........................................................................................................................................................18195.0095913010
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................20180.008031173101
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24178.007848181200
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................20272.501451137430
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................23166.0066162201
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................23162.0062255311
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................25156.00564153232
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................24253.5010743422434
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................24153.005310212110
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22250.001000851221
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21149.0049735610
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19245.5091090100
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20131.0031323500
.....................................................................................AAGAGAGCTATCCGTCGACG.............................................................................................................................................................20130.0030280110
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20127.00271111410
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22126.0026321110
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24223.50477172030
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21223.0046035560
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19223.0046142210
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23222.5045129681
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24222.0044731321
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22222.0044031742
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18221.5043139210
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19221.0042040200
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25120.0020212600
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................18118.0018216000
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21217.5035034010
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23117.001767310
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................21117.0017105200
.....................................................................................AAGAGAGCTATCCGTCGACAGTAA.........................................................................................................................................................24116.0016123010
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................25115.0015321000
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21115.0015131010
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................23214.5029117461
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19114.0014014000
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................19114.001476100
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCT.......................................................................................................24213.5027091530
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23211.5023215510
.......................................................................................GAGAGCTATCCGTCGACA.............................................................................................................................................................18111.001129000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGTT.......................................................................................................25210.5021015600
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................19210.0020016310
.....................................................................................AAGAGAGCTATCCGTCGACC.............................................................................................................................................................20110.001052210
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................1829.5019114211
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................2129.501907921
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................1929.5019610102
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2319.00943200
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................2229.001809360
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2319.00909000
.........................................................................................GAGCTATCCGTCGACAGG...........................................................................................................................................................1819.00990000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................2328.5017017000
..........................................................................................................................................CATGGAATTGCTCTCTTT..........................................................................................................1828.0016015100
......................................................................................................................................CTGTCATGGAATTGCTCT..............................................................................................................1828.001609250
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCC........................................................................................................................................................2518.00831202
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................2218.00841300
........................................................................................AGAGCTATCCGTCGACAG............................................................................................................................................................1818.00817000
........................................................................................................................................GTCATGGAATTGCTCTCT............................................................................................................1828.0016016000
.....................................................................................................................................ACTGTCATGGAATTGCTCTCTTTG.........................................................................................................2427.5015015000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTC.......................................................................................................2427.001429201
droVir3
AT-TGTCCTTTG----GCTTT-------------TT------CAAGCTAACCA---------AAC---TTGCGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCAAGCTA--T----ACAGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGACTTTA--T-------------------ACAT--A-------TACATATATCTTATCTTTATATTT-G----TTTGTCCACATASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................221295899.0029589916847538901181130633464394565161032045418617514312030023711764310892139411425912217942260619200129221421244354711692112333323232245710850442812495497713722295597101217214343912931139252588147515472376881120139
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................231270285.00270285117957436915939175151714683005642630637429725316217136647022974115822898414638916518572810602194134307323281851111177624504612111541612132519643494120316522042332774417276216745420558311681413136778591064581631374849
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................211136252.0013625293196196159111516512193073249023227114296746421210794386626133384812534118616143571087101347372426431062111100010011100663912634146875052660282858372153103591359910112931281818
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23245436.0090872278814923870315160273547623010591447121331734435718221777257442713922142951274365775424347638729543122198549811216420025132185620100000010001011010121651327517082011715637936210132047814882132552725997119288369
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22241798.0083596578242817397141255742113146426116527247270216148594347252113015668352543136913903793501912263916148498610914519921023780670001000000010005182187177138830852191451332336722713240702225276786
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................23233233.50664672391085412571013310417762638419392332309242223703614218157025024111923248584634870583015395169104566360104102122225786703000000000000184230204142109950107182133963325491841926261620255671
.....................................................................................AAGAGAGCTATCCGTCGACAGG...........................................................................................................................................................22123387.002338722665497700000000000000000001000000000020000000000000000000003153007700000071781341300001
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................20123283.0023283104191882252361065413702030283722196538271411495216193217350528157355348010301444400000000000000099481119413800823084315204519614516101120
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................24117456.001745647301151299427189947755501526342323222273554471082561571330142793049033864790547213040020000000000002424537191753772473611185113279922145135163514711
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................21217075.00341509511078215461380255451394121205971021017326013311060154329496882531471180187949812637824924698509194395300000010000100033728495883266801551412551953115122726329690
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................22112790.0012790121773891267021101000000011100200000420301300000900000000000000000101088000000001310000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................23111418.00114185883167427818111351218060711313118151684593103493113143311042188131091180020000000010203322775431775036250702089591469512102121
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2227339.0014678263126130191539633387745119145292122823327134158119243510130518584138334133816471913874000000000000000442041134321820243279888141016912124517165554
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................1917082.0070825284102349202916022000084321076251522122487823460960000261000000001000000218004332000120194034241143510010
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................2416329.00632971629353335100210130131041031409478191232376453135743401566384852100100010000000020520239622955168126551064706419396587187162850
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTC.......................................................................................................2422633.005266111125661212485370081011834921747626014914914193663044045712113240000311314000000000020000439131651814161101072914927122901000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................2421882.0037649734152161521953350111252310213832131161661413174516244209532234342347517470000000000000000000191470505171911445354153461112
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................2421714.503429127951241150816180130865615151132628287740107208921171602258000000000000000012107535744138148123221604876003116
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2211491.001491191711120020100000011010031001014231101000003000000000000000011003381710010133019717400200
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................2121424.5028491932210028446151547105014125412351812276517849501353840252621060010000000000001231095240110645317395610916352761343220
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................2511380.001380240802010100070000010000297164320013114401921100100000000100000000105016748406209268117123117144127132623
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................2221373.002746207151496159214004289681913105562205616881120357641873535525500000000000000000011410791023124100701000318
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................1911320.001320977291300102010000001200011000100502080000070000000000000002000004100000175812237101800000
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2111297.001297180895400100000020000011001100102112031100030000000000000001000002142000022231811102010000
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................2021289.00257843596628752134120050644799327272541021741942857615171061072140000000000000000122134110113842101315377348601718
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................2321268.002536182696102413532321201585114126107796314513476762045111802027109000000000000000018050876902561422625222260410
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................2111218.00121811524221010100000000000120110000021003000000000000000000000000000800000000000000000
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2121210.0024202023300170000000000100002050110871100801000150000000000000000000011700000000200000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................2311079.0010792871057100000100201100020151114041061041415240900000000010000110121129910314181619015125585969948
.........................................................................................GAGCTATCCGTCGACAGT...........................................................................................................................................................181978.009787607100010000000000000000120000111105000002000000000000000000100100000010278422182300000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222673.00134630779134853112100120427618123035236521339044000236700000000000000000002417101000000000000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242658.00131610261635011128745151104863819322353781512534712481113313116120000000000000000106082770223728724561401433278662432
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232579.0011581132101339647217620113156155201224974134415413308336111071470000000000000000000116293023260111031021312
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201533.005335834450000000000000001001000000210101000000000000000000000000000710000002162100000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242515.00103031213912020351600005644593263137397737023852410020268000000000000001120551276015210021230500100
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................241510.0051036971910001000001000000000000001101020000000000000000000000010001701000072530611701010
.....................................................................................AAGAGAGCTATCCGTCGACG.............................................................................................................................................................201496.00496478600000001000000000000000000000000000001000000000000000000000600000001210000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241492.004921424410070202000002133027152001011238160100100020000000000000000200001129408000181230100000
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202443.0088615617163112010603002111401133580021111531102100310490200000000000002013041230011315215367319121655375
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221437.004377007010421040010022230137220206551206000119000000001000000112001166010320351110514032
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202435.50871008560000001000000000000000000110301000002000000000000000000000600000000000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................232364.00728313116543154812000042205438821310313337351230023165000000000000000000012189001134164841434152
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................201345.00345243114000040610000000100310000003100400010300000000000000000000046000000101000200000
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................192248.504974341610216320220001101013854102271894326211102900000000000000000101129000810110142539521147
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................181248.002486206400802041000132011355101307135111300000140000000000000002110101500000020401000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................251186.00186773170000101000000010101310010510501401000300000000000000000000120000000481020500000
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191163.001631201450000000000000000000100000000000000000000000000000000000000300000002000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTCC......................................................................................................252162.00324722312284000000081003321481122150014441170800002430000000000000000010022300100000732200000
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................211155.001559863000000000000000000010000010220000000100000000000000010000016000000031810200000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................222149.00298006511340021010101000644337731072411618135116000000000000000000000440002011500000112265
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAAA.......................................................................................................................................................261145.00145001100000000200000000000016100004065842000100000000000000000000306411621156131013121
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................231127.00127120860010001100000000110100000120102000000000000000000000000000650000000221000100
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................242120.0024040312045011000100011023930321101451461418520200000000000000000000112801045045410440122
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................221112.001123518010000000000100000000000412120000001400000000000000000001110000100515904400100
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTAA........................................................................................................232109.002181050101000002000000100015383010116071019171200000000000000000000011010282350020003251518
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................231109.001095301110100000000000000001100001011050000020000000000000000100212000000003310000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTC..........................................................................................................212100.50201407530131000000001001032170000490201400002210000000000000000000023200010000200000001
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20198.00984302100000000000000000200000000100010000005000000000000000010000300000002500500000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23296.501934037010200000002001011330132443062810211170000000000000000000114900566000202002162
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21196.0096240450010000000000000000000000031100000000000000000000000210000250010043021000000
.....................................................................................AAGAGAGCTATCCGTCGACC.............................................................................................................................................................20194.0094635000000000000000000101200010000011000002000000000000000000000300000001040000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGTC.......................................................................................................25292.501851811910500010000021011145400101660307000002400000000000000000000118000000323620200000
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................20284.001682013400000000000000000011200000111111000004000000000000000000000800000000100000000
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21182.00823048000000100000000010100000025010600000100000000000000000000011000000001010000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................22277.001540043014000100001010217138020058130201011260000000000000000000002900000000000101000
.........................................................................................GAGCTATCCGTCGACAGTCT.........................................................................................................................................................20174.007463010000002000001000000000000000001000001000000000000000000000000000000400000001
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18273.0014620960031202200001100111010000210409000018000000000000000000000600010000000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTAA......................................................................................................25272.50145103000100000300000010012549700011716111921110000000000000000000001000129002000000132
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20172.007291480000000000010000000000000110000000001000000000000000030000500000000101000000
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................19167.006738380010000000000001000000000010002000001000000000000000020000200000002420000000
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22164.0064152270000120000000000000000000010001000001000000000000000000000450000001030100000
..........................................................................................AGCTATCCGTCGACAGTC..........................................................................................................................................................18160.006026250011001000001000000010000060006000000000000000000000010000100000021500000000
.........................................................................................GAGCTATCCGTCGACAGC...........................................................................................................................................................18156.005656000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTC.......................................................................................................23254.001083057106000100000001100221000024020000000140000000000000000000001000000001000000000
.........................................................................................GAGCTATCCGTCGACAGG...........................................................................................................................................................18253.00106103300000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21252.001040056002000000001100001311000135210400000100000000000000000000001200000000000000000
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................18249.50995039007120300001000001120100013000130100011000000000000000001000200101000001000001
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19249.509900770010000000000000000110000350200000004000000000000000000010400000000000000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTC..........................................................................................................22248.5097105250200000000110000200200002400000000050000000000000001020001000000000600001000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24248.5097170751200000010001001121000301506040100080000000000000000000002000010004130010000
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23147.004720270000000000000000000001000010000001000000000000000000000001000000016002500000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................23247.00943038003100000000100100430000004020300001100000000000000000020011600000000001000000
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................19246.00920018005400300000011210203000061050170010115000000000000000000000600000000000000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................25145.0045100600001010000000000003000000121010000000000000000000000000001300000010400100000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTTC........................................................................................................23244.508900160011100200010100011211021023110500000150000000000000000000002100000000000000000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23243.0086341300010001000000000000000000010003000005000000000000000000000900000001000000000
.........................................................................................GAGCTATCCGTCGACAGTCA.........................................................................................................................................................20142.004222010000000000000000000000000000000000000000000000000000000000000000031246300000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................26141.004191500000000000000000011000001100000000000000000000000000000001800000002000200000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTCA......................................................................................................25238.5077007017000000002100021034001056021301101120000000000000000000101120000000110000000
........................................................................................AGAGCTATCCGTCGACAG............................................................................................................................................................18138.003821070010000000000000000000000111101000000000000000000000000000300000000100000000
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAAAA......................................................................................................................................................27136.00360000000000004000000000001010000000014200000000000000000000000001055130010010132
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTAA........................................................................................................24234.506900100010000000000001001042120000502469200000000000000000000001020104000000520022
...................................................................................TGAAGAGAGCTATCCGTCGAC..............................................................................................................................................................21134.00348310000100000000001000001000310002100100000000000000000000000300000103300100000
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19234.006800670000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................19233.5067140210011000000000000000100010000100000004000000000000000000000200000036612200010
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTTC......................................................................................................25233.006600920300000000010001003220207522130000080000000000000000001001101000000000000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24232.0064280270000000000000000000000000000001000000000000000000000000000400010000001000011
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19231.506300570030000000000000000000000000001000001000000000000000000000100000000000000000
droMoj3
TG---TCTGCCT-A-TGTCCTTT---------------------GTCCC---TCA-------G---TTCTGCGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTATAT----ACATATTTTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGATAT--------------------------ATATGTATAAACTATATATATATTATCTATATGTT---------------CTTGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................23146677.004667719962421395600618519114
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................22123978.0023978123687615627568810415
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................23221715.50434312500345931048373516441
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................22218743.003748629916931942781116894
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2419851.00985123353650841017245
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................2329696.0019392124862021683168825338
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................2117663.007663470959076312752
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................2226222.5012445934274159752921
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................2126121.0012242977976976302281
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................2014087.00408721841393871818
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2313220.00322098742333182155
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2211576.00157615340131523
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................2121360.50272118784171730775
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................2121254.0025082427100377
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTC.......................................................................................................2421190.502381133224875112812
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2111001.001001983012213
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................242914.00182876081214179855
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................222828.0016561122104713500
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................232744.00148881871618259370
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................241729.0072945517418244
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................191689.006894200532259
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................232664.001328936724619336
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................232545.5010918110663265
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................222507.00101474611684239
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTC.........................................................................................................222502.001004661015141313
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................242477.009544861510933401
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................202377.5075574700008
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................202353.5070757505213112
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................202346.0069232812115345
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................201345.0034534300002
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................242299.0059835782330198
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................221235.002351410517144
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................231207.002075564710125
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................232201.504032243427163
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................241200.00200970000103
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................231181.00181165010015
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................191170.0017017000000
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................242151.50303186804897
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................231144.0014469144462
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................221119.0011945124265
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................20192.009226022062
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................24276.5015371034867
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................20271.0014213700005
......................................................................................................................................CTGTCATGGAATTGCTCTCTTC..........................................................................................................22269.50139940021627
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................24268.50137835001138
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTC.......................................................................................................23268.00136118001017
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................22168.00686500003
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21167.00675700073
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................18165.006546024013
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25155.005529001124
...................................................................................................................................ATACTGTCATGGAATTGCTCT..............................................................................................................21152.005223031025
...................................................................................................................................ATACTGTCATGGAATTGCTCTC.............................................................................................................22148.004819002027
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19245.00908200107
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTTC........................................................................................................24238.007659020015
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGTC.......................................................................................................25238.007636111532
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................22237.50756701025
......................................................................................AGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................23137.00373700000
......................................................................................AGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................23237.00747300001
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................25137.00375000032
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................21236.00726600114
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................21232.00646200002
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTTC........................................................................................................23231.006235010026
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................20129.00292500004
.......................................................................................................................................TGTCATGGAATTGCTCTCTTC..........................................................................................................21229.005833001420
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................25227.505515000040
.........................................................................................................................................TCATGGAATTGCTCTCTTT..........................................................................................................19226.50535300000
........................................................................................................................................GTCATGGAATTGCTCTCTTTC.........................................................................................................21225.50515100000
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................18225.00504300007
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................23223.504725111019
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................19223.50474200005
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTC........................................................................................................................................................25123.00231400018
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTTC......................................................................................................25222.004427100115
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................21122.00221300009
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................23221.50434000003
.........................................................................................GAGCTATCCGTCGACAGTC..........................................................................................................................................................19121.00211800012
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTCC......................................................................................................25220.50412701139
........................................................................................AGAGCTATCCGTCGACAGTCAAGTTA....................................................................................................................................................26119.00191101115
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................18119.00191900000
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................19218.00363600000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTCA......................................................................................................25218.003611210022
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................19218.00363100023
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23117.0017710126
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................25116.00161100005
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................22216.00322600006
.......................................................................................GAGAGCTATCCGTCGACAG............................................................................................................................................................19116.00161600000
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................22116.0016601009
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................26115.00154000011
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................24215.00302400006
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................23215.00302411013
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................20115.0015800034
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................24114.0014901202
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................18212.00242210001
......................................................................................................................................CTGTCATGGAATTGCTCTCTTG..........................................................................................................22211.50231300109
.....................................................................................AAGAGAGCTATCCGTCGACAGTTC.........................................................................................................................................................24211.00221700014
........................................................................................................................................GTCATGGAATTGCTCTCTTTGA........................................................................................................22211.00222000002
.....................................................................................................................................ACTGTCATGGAATTGCTCTCTTTG.........................................................................................................24210.50212100000
...................................................................................................................................ATACTGTCATGGAATTGCTCTCTC...........................................................................................................24110.0010601003
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................23110.0010900010
.......................................................................................GAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................22110.0010900001
........................................................................................AGAGCTATCCGTCGACAGT...........................................................................................................................................................19110.0010900010
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTC.......................................................................................................................................................26110.0010300106
......................................................................................................................................CTGTCATGGAATTGCTCT..............................................................................................................1829.50191300303
.........................................................................................................................................TCATGGAATTGCTCTCTTTGTC.......................................................................................................2229.00181400103
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................1928.5017900026
..........................................................................................................................................CATGGAATTGCTCTCTTTGT........................................................................................................2028.50171600010
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................2118.008601001
.....................................................................................AAGAGAGCTATCCGTCGACAC............................................................................................................................................................2118.008100016
....................................................................................GAAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2418.008800000
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCT.......................................................................................................2428.0016900016
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTCC........................................................................................................2427.5015801006
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGCC.......................................................................................................2427.5015901023
.....................................................................................AAGAGAGCTATCCGTCGAA..............................................................................................................................................................1917.007600001
droGri2
TT---TCAA------AGCTTT------GCGGCTTT-TAAGTTTC--------A--------CAACAAATTACGAATAGCGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTATAT----ACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGATATTT-AT--------AA------TATATAT----------------------------ATGTTT-AGTTGAT--TGTCCCAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.....................................................................................AAGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................2314428.00442817522676
.....................................................................................AAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2213708.00370816112097
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTG.........................................................................................................2223072.00614430103134
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTG.........................................................................................................2321876.00375217042048
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGT........................................................................................................2321314.50262911951434
.....................................................................................AAGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2411142.001142293849
.......................................................................................................................................TGTCATGGAATTGCTCTCTTT..........................................................................................................212928.001856901955
.....................................................................................AAGAGAGCTATCCGTCGACAG............................................................................................................................................................211910.00910515395
......................................................................................................................................CTGTCATGGAATTGCTCTCTTT..........................................................................................................222616.001232663569
.....................................................................................AAGAGAGCTATCCGTCGACA.............................................................................................................................................................201558.00558252306
.....................................................................................AAGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................231324.0032491233
......................................................................................................................................CTGTCATGGAATTGCTCTCTT...........................................................................................................212148.00296152144
........................................................................................................................................GTCATGGAATTGCTCTCTTTG.........................................................................................................212148.0029628511
......................................................................................AGAGAGCTATCCGTCGACAGT...........................................................................................................................................................211144.001441431
......................................................................................AGAGAGCTATCCGTCGACAGTC..........................................................................................................................................................221133.001331294
.....................................................................................AAGAGAGCTATCCGTCGAC..............................................................................................................................................................19195.00956035
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTT.........................................................................................................22284.501699079
........................................................................................................................................GTCATGGAATTGCTCTCTTTGT........................................................................................................22279.0015812038
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGC........................................................................................................23278.0015646110
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTT.........................................................................................................23270.001407268
.......................................................................................................................................TGTCATGGAATTGCTCTCTT...........................................................................................................20262.001247153
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTT.......................................................................................................24259.501193881
.....................................................................................AAGAGAGCTATCCGTCGACAGTCC.........................................................................................................................................................24256.001124963
......................................................................................AGAGAGCTATCCGTCGACAG............................................................................................................................................................20151.0051510
.....................................................................................AAGAGAGCTATCCGTCGACAGTCA.........................................................................................................................................................24147.00472126
........................................................................................................................................GTCATGGAATTGCTCTCTTT..........................................................................................................20242.0084822
......................................................................................................................................CTGTCATGGAATTGCTCTCT............................................................................................................20234.00682048
.....................................................................................AAGAGAGCTATCCGTCGACAGTA..........................................................................................................................................................23134.0034529
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGA........................................................................................................23230.50611744
.....................................................................................AAGAGAGCTATCCGTCGACAGTTT.........................................................................................................................................................24128.00281315
......................................................................................AGAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................23128.0028253
......................................................................................AGAGAGCTATCCGTCGACA.............................................................................................................................................................19127.0027261
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGT........................................................................................................24226.00523121
.....................................................................................AAGAGAGCTATCCGTCGACAGTG..........................................................................................................................................................23125.0025223
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTT........................................................................................................................................................25114.001486
.......................................................................................................................................TGTCATGGAATTGCTCTCT............................................................................................................19212.5025187
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGA........................................................................................................24211.5023194
.....................................................................................AAGAGAGCTATCCGTCGA...............................................................................................................................................................18111.0011110
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTC.........................................................................................................23210.5021120
......................................................................................................................................CTGTCATGGAATTGCTCTC.............................................................................................................19210.0020200
.....................................................................................AAGAGAGCTATCCGTCGACAGA...........................................................................................................................................................22110.001037
.....................................................................................AAGAGAGCTATCCGTCGACT.............................................................................................................................................................20110.001055
.......................................................................................GAGAGCTATCCGTCGACAGTC..........................................................................................................................................................21110.0010100
.........................................................................................................................................TCATGGAATTGCTCTCTTTG.........................................................................................................2029.5019181
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTA.......................................................................................................2428.0016511
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGG........................................................................................................2328.001697
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTA.........................................................................................................2327.5015213
......................................................................................AGAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2217.00761
.......................................................................................................................................TGTCATGGAATTGCTCTC.............................................................................................................1826.5013130
.......................................................................................GAGAGCTATCCGTCGACAGT...........................................................................................................................................................2016.00660
...........................................................................................................................................ATGGAATTGCTCTCTTTG.........................................................................................................1825.001082
........................................................................................................................................GTCATGGAATTGCTCTCTTTT.........................................................................................................2125.0010100
........................................................................................................................................GTCATGGAATTGCTCTCTTTGC........................................................................................................2225.001073
.....................................................................................AAGAGAGCTATCCGTCGACAGTAT.........................................................................................................................................................2415.00505
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGG........................................................................................................2424.50981
........................................................................................................................................GTCATGGAATTGCTCTCTTTGTT.......................................................................................................2324.50990
.......................................................................................GAGAGCTATCCGTCGACAGTCT.........................................................................................................................................................2214.00440
.....................................................................................AAGAGAGCTATCCGTCGACAGC...........................................................................................................................................................2214.00404
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTA.........................................................................................................2224.00844
.......................................................................................GAGAGCTATCCGTCGACA.............................................................................................................................................................1814.00440
..........................................................................................................................................CATGGAATTGCTCTCTTTG.........................................................................................................1923.50770
...................................................................................TGAAGAGAGCTATCCGTCGACA.............................................................................................................................................................2213.00312
.........................................................................................................................................TCATGGAATTGCTCTCTTTGT........................................................................................................2123.00651
....................................................................................GAAGAGAGCTATCCGTCGACAGT...........................................................................................................................................................2313.00330
......................................................................................AGAGAGCTATCCGTCGAC..............................................................................................................................................................1813.00330
.....................................................................................AAGAGAGCTATCCGTCGACAGTTTT........................................................................................................................................................2513.00303
........................................................................................AGAGCTATCCGTCGACAGTC..........................................................................................................................................................2013.00312
......................................................................................................................................CTGTCATGGAATTGCTCTCTTTGC........................................................................................................2422.50514
.....................................................................................AAGAGAGCTATCCGTCGACAGTCCT........................................................................................................................................................2522.50514
........................................................................................................................................GTCATGGAATTGCTCTCT............................................................................................................1822.50550
........................................................................................................................................GTCATGGAATTGCTCTCTT...........................................................................................................1922.50550
..........................................................................................................................................CATGGAATTGCTCTCTTTGT........................................................................................................2022.50541
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTTT.......................................................................................................................................................2612.00211
.....................................................................................AAGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................2412.00211
.......................................................................................GAGAGCTATCCGTCGACAGTT..........................................................................................................................................................2112.00220
.....................................................................................AAGAGAGCTATCCGTCGACAA............................................................................................................................................................2112.00211
.....................................................................................AAGAGAGCTATCCGTCGACAGTGT.........................................................................................................................................................2412.00202
.....................................................................................AAGAGAGCTATCCGTCGACAGTCAA........................................................................................................................................................2512.00202
......................................................................................AGAGAGCTATCCGTCGACAGTCG.........................................................................................................................................................2312.00220
...................................................................................................................................ATACTGTCATGGAATTGCTCTCT............................................................................................................2322.00422
.......................................................................................................................................TGTCATGGAATTGCTCTCTTG..........................................................................................................2122.00413
......................................................................................................................................CTGTCATGGAATTGCTCT..............................................................................................................1822.00440
.....................................................................................AAGAGAGCTATCCGTCGACAT............................................................................................................................................................2112.00220
.......................................................................................................................................TGTCATGGAATTGCTCTCTTGT.........................................................................................................2221.50303
..........................................................................................................................................CATGGAATTGCTCTCTTT..........................................................................................................1821.50330
...........................................................................................................................................ATGGAATTGCTCTCTTTGT........................................................................................................1921.50321
.......................................................................................................................................TGTCATGGAATTGCTCTCTTTGTG.......................................................................................................2421.50330
..........................................................................................AGCTATCCGTCGACAGTCT.........................................................................................................................................................1911.00110
.....................................................................................AAGAGAGCTATCCGTCGATT.............................................................................................................................................................2011.00101
.....................................................................................AAGAGAGCTATCCGTCGACAGTCTG........................................................................................................................................................2511.00110

Generated: 10/20/2015 at 06:54 PM