ID:

der-mir-278

 Coordinate:

scaffold_4845:14318920-14319010 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.6 -36.6 -36.6

Flybase annnotation

utr5 [utr5_plus_4537]; pre_miRNA [Dere\mir-278-RM]; miRNA [Dere\miR-278-RA]

No Repeatable elements found

Sense Strand Reads

GTTCACCTGCGACGATTTTTAATCTATTTTAAATGTGATACGAGACCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTCCGTTCGAGAATTATTTATGATGCCGTCTTGC

****************************************************((((((....(((((.(((((((.(((((.((.(((((.(((.......)))))))).))))))).))))))).)))))..))))))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 V108

head

 V060

head

 V107

male body		 M057

embryo

 GSM1528801

follicle cells		 V040

embryo
..........................................................................................................TCGGTGGGACTTTCGTCCGTTT............................................................... 22 0 1 23337.00 23337 21437 731 520 543 44 59 3
..........................................................................................................TCGGTGGGACTTTCGTCCGTT................................................................ 21 0 1 6276.00 6276 5241 502 335 179 2 17 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTT............................................................... 21 0 1 1443.00 1443 1442 1 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGACC..................................................................................................... 23 0 1 1206.00 1206 452 520 23 71 118 0 22
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTT.............................................................. 23 1 1 1144.00 1144 1063 17 17 14 0 33 0
..........................................................................................................TCGGTGGGACTTTCGTCCGT................................................................. 20 0 1 391.00 391 376 6 7 2 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTT................................................................ 20 0 1 352.00 352 352 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCTTTT............................................................... 22 1 1 153.00 153 148 2 3 0 0 0 0
..........................................................................................................TCTGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 140.00 140 124 6 1 9 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTT............................................................. 24 1 1 136.00 136 133 0 1 1 0 1 0
..........................................................................................................TCGGTGGGACTTTCTTCCGTTT............................................................... 22 1 1 133.00 133 130 0 3 0 0 0 0
..........................................................................................................TCGGCGGGACTTTCGTCCGTTT............................................................... 22 1 1 130.00 130 123 3 2 2 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGTTT............................................................... 22 1 1 128.00 128 126 0 2 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTGT............................................................... 22 1 1 126.00 126 126 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTA.............................................................. 23 1 1 119.00 119 78 18 8 5 0 10 0
...................................................................CCGGATGATGGTTCACAACGAC...................................................................................................... 22 0 1 90.00 90 50 25 1 10 1 0 3
...................................................................CCGGATGATGGTTCACAACGA....................................................................................................... 21 0 1 89.00 89 66 13 0 9 1 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTT.............................................................. 22 1 1 81.00 81 80 1 0 0 0 0 0
............................................................................................................GGTGGGACTTTCGTCCGTTT............................................................... 20 0 1 77.00 77 69 4 4 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGGTT............................................................... 22 1 1 71.00 71 71 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCG.................................................................. 19 0 1 70.00 70 67 1 1 1 0 0 0
..........................................................................................................TCGTTGGGACTTTCGTCCGTTT............................................................... 22 1 1 69.00 69 66 0 0 0 2 1 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTG.............................................................. 23 0 1 63.00 63 61 1 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCAGTTT............................................................... 22 1 1 61.00 61 48 11 1 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCTTT................................................................ 21 1 1 61.00 61 56 2 2 1 0 0 0
....................................................................CGGATGATGGTTCACAACGACC..................................................................................................... 22 0 1 58.00 58 55 2 0 1 0 0 0
...................................................................CCGGATGATGGTTCACAACG........................................................................................................ 20 0 1 56.00 56 28 13 3 12 0 0 0
..........................................................................................................TCGGTTGGACTTTCGTCCGTTT............................................................... 22 1 1 50.00 50 39 9 0 1 0 1 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTG................................................................ 21 1 1 43.00 43 43 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGCCCGTTT............................................................... 22 1 1 39.00 39 36 1 1 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTA............................................................... 22 1 1 37.00 37 19 9 2 7 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTAA............................................................. 24 2 1 35.00 35 21 8 1 4 0 1 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTC.............................................................. 23 1 1 34.00 34 24 6 3 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTC............................................................... 22 1 1 34.00 34 29 3 1 0 1 0 0
..........................................................................................................TCTGTGGGACTTTCGTCCGTT................................................................ 21 1 1 32.00 32 27 4 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCCTCCGTTT............................................................... 22 1 1 31.00 31 29 0 1 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGGCCGTTT............................................................... 22 1 1 29.00 29 29 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTTGTCCGTTT............................................................... 22 1 1 28.00 28 26 1 1 0 0 0 0
...........................................................................................................TCGTGGGACTTTCGTCCGTTT............................................................... 21 2 1 28.00 28 24 4 0 0 0 0 0
..........................................................................................................TCGGTGCGACTTTCGTCCGTTT............................................................... 22 1 1 28.00 28 28 0 0 0 0 0 0
..........................................................................................................CCGGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 27.00 27 24 1 2 0 0 0 0
..........................................................................................................TCGGCGGGACTTTCGTCCGTT................................................................ 21 1 1 27.00 27 25 1 1 0 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGTT................................................................ 21 1 1 26.00 26 23 0 3 0 0 0 0
..........................................................................................................TCAGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 25.00 25 23 1 1 0 0 0 0
.........................................................................................................GTCGGTGGGACTTTCGTCCGTTT............................................................... 23 0 1 25.00 25 25 0 0 0 0 0 0
..........................................................................................................TGGGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 25.00 25 24 0 0 1 0 0 0
..........................................................................................................TTGGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 24.00 24 22 1 0 0 1 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTG............................................................... 22 1 1 24.00 24 22 1 1 0 0 0 0
..........................................................................................................GCGGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 24.00 24 23 0 0 1 0 0 0
..........................................................................................................ACGGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 23.00 23 23 0 0 0 0 0 0
.........................................................................................................CTCGGTGGGACTTTCGTCCGTTT............................................................... 23 1 1 22.00 22 22 0 0 0 0 0 0
..........................................................................................................TCGGTGGCACTTTCGTCCGTTT............................................................... 22 1 1 22.00 22 21 1 0 0 0 0 0
..........................................................................................................TCGGTGTGACTTTCGTCCGTTT............................................................... 22 1 1 22.00 22 18 3 1 0 0 0 0
..........................................................................................................TCGCTGGGACTTTCGTCCGTTT............................................................... 22 1 1 22.00 22 19 2 0 0 0 1 0
.........................................................................................................TTCGGTGGGACTTTCGTCCGTTT............................................................... 23 1 1 21.00 21 21 0 0 0 0 0 0
..........................................................................................................TCGATGGGACTTTCGTCCGTTT............................................................... 22 1 1 20.00 20 19 0 1 0 0 0 0
..........................................................................................................TCGGTAGGACTTTCGTCCGTTT............................................................... 22 1 1 20.00 20 14 2 4 0 0 0 0
..........................................................................................................TCGGTGGGACCTTCGTCCGTTT............................................................... 22 1 1 20.00 20 20 0 0 0 0 0 0
..........................................................................................................TCGGAGGGACTTTCGTCCGTTT............................................................... 22 1 1 20.00 20 14 0 4 1 1 0 0
..........................................................................................................TCGGTGAGACTTTCGTCCGTTT............................................................... 22 1 1 20.00 20 15 0 5 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTTT............................................................ 25 2 1 19.00 19 17 1 1 0 0 0 0
.........................................................................................................ATCGGTGGGACTTTCGTCCGTTT............................................................... 23 1 1 19.00 19 19 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGACCGTTT............................................................... 22 1 1 19.00 19 19 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCTTCCGTT................................................................ 21 1 1 18.00 18 17 1 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGT................................................................. 19 0 1 18.00 18 18 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCTTTTT.............................................................. 23 2 1 18.00 18 18 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGCCCGTT................................................................ 21 1 1 17.00 17 12 3 2 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGGT................................................................ 21 1 1 17.00 17 15 0 2 0 0 0 0
..........................................................................................................TCGGTGTGACTTTCGTCCGTT................................................................ 21 1 1 17.00 17 7 10 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCAGTT................................................................ 21 1 1 16.00 16 14 2 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGCTT............................................................... 22 1 1 15.00 15 7 0 5 3 0 0 0
..........................................................................................................TCGGTGGGGCTTTCGTCCGTTT............................................................... 22 1 1 15.00 15 12 1 2 0 0 0 0
..........................................................................................................TCGGTTGGACTTTCGTCCGTT................................................................ 21 1 1 15.00 15 9 6 0 0 0 0 0
..........................................................................................................TCGGTGGGACTGTCGTCCGTTT............................................................... 22 1 1 15.00 15 15 0 0 0 0 0 0
..........................................................................................................TCGGTCGGACTTTCGTCCGTTT............................................................... 22 1 1 14.00 14 13 1 0 0 0 0 0
............................................................................................................GGTGGGACTTTCGTCCGTT................................................................ 19 0 1 14.00 14 8 2 4 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTTCGTTT............................................................... 22 1 1 14.00 14 10 3 0 1 0 0 0
..........................................................................................................TCGGTGGGACTCTCGTCCGTTT............................................................... 22 1 1 14.00 14 14 0 0 0 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGGTT............................................................... 22 2 1 13.00 13 13 0 0 0 0 0 0
...................................................................CCTGATGATGGTTCACAACGACC..................................................................................................... 23 1 1 13.00 13 2 11 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCTGTTT............................................................... 22 1 1 13.00 13 10 2 1 0 0 0 0
.............................................................................................................GTGGGACTTTCGTCCGTTT............................................................... 19 0 1 12.00 12 12 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCATCCGTTT............................................................... 22 1 1 12.00 12 11 0 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGGCCGTT................................................................ 21 1 1 12.00 12 12 0 0 0 0 0 0
.........................................................................................................CTCGGTGGGACTTTCGTCCGTT................................................................ 22 1 1 12.00 12 10 2 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCTTTTT............................................................... 22 2 1 11.00 11 11 0 0 0 0 0 0
..........................................................................................................TTGGTGGGACTTTCGTCCGTT................................................................ 21 1 1 11.00 11 11 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCTTCCGTTT............................................................... 21 1 1 11.00 11 11 0 0 0 0 0 0
..........................................................................................................TCGGTGAGACTTTCGTCCGTT................................................................ 21 1 1 10.00 10 5 1 4 0 0 0 0
..........................................................................................................TCGTTGGGACTTTCGTCCGTT................................................................ 21 1 1 10.00 10 10 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACTACC..................................................................................................... 23 1 1 10.00 10 1 8 0 0 0 0 1
..........................................................................................................TCGGTGGTACTTTCGTCCGTTT............................................................... 22 1 1 10.00 10 7 1 1 1 0 0 0
...................................................................CAGGATGATGGTTCACAACGACC..................................................................................................... 23 1 1 10.00 10 0 10 0 0 0 0 0
..........................................................................................................TCCGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 9.00 9 7 1 1 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGACT..................................................................................................... 23 1 1 9.00 9 4 5 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTCCGTCCGTTT............................................................... 22 1 1 9.00 9 8 0 0 0 1 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTG............................................................... 21 1 1 9.00 9 9 0 0 0 0 0 0
...................................................................CCGGATGATTGTTCACAACGACC..................................................................................................... 23 1 1 9.00 9 0 9 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTGGTCCGTTT............................................................... 22 1 1 9.00 9 8 0 0 0 0 1 0
...........................................................................................................CGGTGGGACTTTCGTCCG.................................................................. 18 0 1 8.00 8 8 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTAT............................................................. 24 1 1 8.00 8 8 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTACGTT................................................................ 21 1 1 8.00 8 0 8 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCATTT............................................................... 22 1 1 8.00 8 4 1 3 0 0 0 0
..........................................................................................................TCGGTGGGATTTTCGTCCGTTT............................................................... 22 1 1 8.00 8 7 0 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCGTTT................................................................ 21 2 1 8.00 8 2 4 0 2 0 0 0
............................................................................................................TGTGGGACTTTCGTCCGTTT............................................................... 20 1 2 8.00 16 15 1 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTGG............................................................. 24 1 1 8.00 8 8 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACCTTCGTCCGTT................................................................ 21 1 1 8.00 8 8 0 0 0 0 0 0
...........................................................................................................CGGTTGGACTTTCGTCCGTTT............................................................... 21 1 1 8.00 8 8 0 0 0 0 0 0
..........................................................................................................TAGGTGGGACTTTCGTCCGTT................................................................ 21 1 1 7.00 7 1 5 0 1 0 0 0
..........................................................................................................TCGGTGCGACTTTCGTCCGTT................................................................ 21 1 1 7.00 7 6 0 1 0 0 0 0
..........................................................................................................TAGGTGGGACTTTCGTCCGTTT............................................................... 22 1 1 7.00 7 1 3 1 1 0 1 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTA............................................................. 24 2 1 7.00 7 6 0 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTG............................................................. 24 2 1 7.00 7 5 0 0 2 0 0 0
..........................................................................................................TCGGTGGGACTTGCGTCCGTTT............................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTA.............................................................. 22 1 1 7.00 7 7 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTACGTTT............................................................... 22 1 1 7.00 7 1 5 1 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTTT............................................................. 23 1 1 7.00 7 7 0 0 0 0 0 0
..........................................................................................................TCGGTGGTACTTTCGTCCGTT................................................................ 21 1 1 7.00 7 2 4 0 0 0 1 0
..........................................................................................................TCGATGGGACTTTCGTCCGTT................................................................ 21 1 1 7.00 7 6 0 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCCTCCGTT................................................................ 21 1 1 7.00 7 5 1 1 0 0 0 0
...................................................................CCGGATGATGGTTCACAAC......................................................................................................... 19 0 1 7.00 7 3 3 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTAA............................................................ 25 2 1 6.00 6 4 1 0 1 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGTTTT.............................................................. 23 2 1 6.00 6 5 0 0 1 0 0 0
..........................................................................................................TCGGTGGGTCTTTCGTCCGTT................................................................ 21 1 1 6.00 6 1 0 5 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGACCT.................................................................................................... 24 1 1 6.00 6 4 0 0 2 0 0 0
..........................................................................................................TCGGTGGGACTCTCGTCCGTT................................................................ 21 1 1 6.00 6 3 1 0 2 0 0 0
....................................................................CGGATGATGGTTCACAACGA....................................................................................................... 20 0 1 6.00 6 6 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGCT................................................................ 21 1 1 6.00 6 3 0 3 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTTCGTT................................................................ 21 1 1 6.00 6 4 2 0 0 0 0 0
...........................................................................................................CGTTGGGACTTTCGTCCGTTT............................................................... 21 1 1 6.00 6 6 0 0 0 0 0 0
...................................................................CCGGACGATGGTTCACAACGACC..................................................................................................... 23 1 1 6.00 6 0 1 0 0 4 0 1
..........................................................................................................TCGGTGGGACTTTTGTCCGTT................................................................ 21 1 1 6.00 6 6 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTCCGTCCGTT................................................................ 21 1 1 6.00 6 5 1 0 0 0 0 0
..........................................................................................................TCGGTGGAACTTTCGTCCGTTT............................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0
..........................................................................................................TCGGTAGGACTTTCGTCCGTT................................................................ 21 1 1 6.00 6 4 1 1 0 0 0 0
..........................................................................................................TCGCTGGGACTTTCGTCCGTT................................................................ 21 1 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................................GTCGGTGGGACTTTCGTCCGTT................................................................ 22 0 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................TCGGGGGGACTTTCGTCCGTTT............................................................... 22 1 1 5.00 5 2 0 2 1 0 0 0
..............................................................................................................TGGGACTTTCGTCCGTTT............................................................... 18 0 1 5.00 5 5 0 0 0 0 0 0
.....................................................................GGATGATGGTTCACAACGACC..................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCT................................................................... 18 1 1 5.00 5 2 3 0 0 0 0 0
...................................................................ACGGATGATGGTTCACAACGACC..................................................................................................... 23 1 1 5.00 5 0 5 0 0 0 0 0
....................................................................CGGATGATGGTTCACAACGAC...................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGACG..................................................................................................... 23 1 1 5.00 5 0 5 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGT....................................................................................................... 21 1 1 5.00 5 1 3 0 1 0 0 0
..........................................................................................................TCGGGTGGACTTTCGTCCGTTT............................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTGCGTGT............................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGACA..................................................................................................... 23 1 1 5.00 5 2 3 0 0 0 0 0
..........................................................................................................TCTGTGGGACTTTCGTCCTTTT............................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0
...................................................................CGGGATGATGGTTCACAACGACC..................................................................................................... 23 1 1 5.00 5 1 0 0 0 4 0 0
..........................................................................................................TGGGTGGGACTTTCGTCCGTT................................................................ 21 1 1 5.00 5 5 0 0 0 0 0 0
...................................................................CCGGATTATGGTTCACAACGACC..................................................................................................... 23 1 1 5.00 5 0 4 0 1 0 0 0
..........................................................................................................CCGGTGGGACTTTCGTCCGTT................................................................ 21 1 1 5.00 5 3 1 1 0 0 0 0
...........................................................................................................TCGTGGGACTTTCGTCCGTT................................................................ 20 2 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................TCGGTGGCACTTTCGTCCGTT................................................................ 21 1 1 5.00 5 5 0 0 0 0 0 0
...........................................................................................................CGGAGGGACTTTCGTCCGTTT............................................................... 21 1 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................TCGTTGGGACTTTCGTCCGTTTT.............................................................. 23 2 1 5.00 5 5 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACGGCC..................................................................................................... 23 1 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTAAA............................................................ 25 2 1 5.00 5 2 2 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCATCCGTT................................................................ 21 1 1 4.00 4 3 0 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTGTA............................................................ 25 0 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGCGGGACTTTCGTCCGTTTT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTC.............................................................. 22 1 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTC................................................................ 21 1 1 4.00 4 2 2 0 0 0 0 0
............................................................................................................GGTGGGACTTTCGTCCGTTTT.............................................................. 21 1 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCC................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCATAACGACC..................................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTCT............................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0
...................................................................CCGGATGATGCTTCACAACGACC..................................................................................................... 23 1 1 4.00 4 1 2 0 0 0 0 1
..........................................................................................................TCGGTGGGAGTTTCGTCCGTTT............................................................... 22 1 1 4.00 4 3 0 0 0 0 1 0
..........................................................................................................TCGGGGGGACTTTCGTCCGTT................................................................ 21 1 1 4.00 4 1 1 2 0 0 0 0
...................................................................CCGGATGATGGCTCACAACGACC..................................................................................................... 23 1 1 4.00 4 2 0 2 0 0 0 0
...................................................................CCGAATGATGGTTCACAACGACC..................................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTCT............................................................. 24 1 1 4.00 4 3 1 0 0 0 0 0
...................................................................CCGGATGATGGTTCACACCGACC..................................................................................................... 23 1 1 4.00 4 2 1 1 0 0 0 0
...........................................................................................................CGGTCGGACTTTCGTCCGTT................................................................ 20 1 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................................ATCGGTGGGACTTTCGTCCGTT................................................................ 22 1 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTTTT........................................................... 26 3 1 4.00 4 4 0 0 0 0 0 0
...................................................................CCGTATGATGGTTCACAACGACC..................................................................................................... 23 1 1 4.00 4 1 2 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTGCGTT................................................................ 21 1 1 4.00 4 1 2 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCTT.................................................................. 19 2 2 4.00 8 8 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCTTT................................................................ 20 1 1 4.00 4 4 0 0 0 0 0 0
...................................................................CCCGATGATGGTTCACAACGACC..................................................................................................... 23 1 1 4.00 4 0 1 0 0 3 0 0
..........................................................................................................TCGGTGGGACTTTCTTCCGTTTT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTTC............................................................. 24 2 1 4.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCATTTT............................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAGCGACC..................................................................................................... 23 1 1 3.00 3 0 3 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCCTT................................................................ 21 1 1 3.00 3 1 1 1 0 0 0 0
...........................................................................................................CGGTGGGAATTTCGTCCGTTT............................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGGTTT.............................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCAGTGGGACTTTCGTCCTTTT............................................................... 22 2 1 3.00 3 2 0 1 0 0 0 0
..........................................................................................................TCGGTGGGGCTTTCGTCCGTT................................................................ 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTAGTCCGTTT............................................................... 22 1 1 3.00 3 0 1 1 0 0 1 0
..........................................................................................................TCGGTGGGTCTTTCGTCCGTTT............................................................... 22 1 1 3.00 3 1 0 2 0 0 0 0
........................................................................................................ATTCGGTGGGACTTTCGTCCGTTT............................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTA................................................................ 21 1 1 3.00 3 1 0 1 1 0 0 0
.............................................................................................................GTGGGACTTTCGTCCGTT................................................................ 18 0 1 3.00 3 3 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCACAACAACC..................................................................................................... 23 1 1 3.00 3 2 0 0 0 0 0 1
..........................................................................................................TCAGTGGGACTTTCGTCCGTT................................................................ 21 1 1 3.00 3 1 2 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCTT................................................................. 20 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGATTTTCGTCCGTGT............................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGAATTTCGTCCGTTT............................................................... 22 1 1 3.00 3 1 1 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTGTT.............................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0
...................................................................CCGGATGATGTTTCACAACGACC..................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0
..........................................................................................................TCGGTGGCACTTTCGTCCGT................................................................. 20 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTCGGACTTTCGTCCGTT................................................................ 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGACGGGACTTTCGTCCGTTT............................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0
...........................................................................................................CGGTGGGCCTTTCGTCCGTTT............................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TGGGTGGGACTTTCGTCCGTTTT.............................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGCTTT.............................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCCGTGGGACTTTCGTCCGTT................................................................ 21 1 1 3.00 3 2 1 0 0 0 0 0
..........................................................................................................TCGCCGGGACTTTCGTCCGTTT............................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0
...........................................................................................................CGGTCGGACTTTCGTCCGTTT............................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTGGTCCGTT................................................................ 21 1 1 3.00 3 1 0 0 1 0 1 0
...........................................................................................................CGGTGGGACGTTCGTCCGTTT............................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCCTTT............................................................... 22 1 1 3.00 3 1 0 2 0 0 0 0
..........................................................................................................ACGGTGGGACTTTCGTCCGTT................................................................ 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACATTCGTCCGTTT............................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTTCGTTT............................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
...................................................................CCGGATGATGGTTAACAACGACC..................................................................................................... 23 1 1 3.00 3 0 3 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCTGTT................................................................ 21 1 1 3.00 3 2 0 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGACCGTT................................................................ 21 1 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTCA............................................................. 24 2 1 3.00 3 2 0 1 0 0 0 0
...........................................................................................................CTGTGGGACTTTCGTCCGTTT............................................................... 21 1 2 2.50 5 5 0 0 0 0 0 0
............................................................................................................CGTGGGACTTTCGTCCGTTT............................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCTTTTTT.............................................................. 23 3 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTG.............................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCATCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGCGGGACTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGATGGGACTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................TGGTGGGACTTTCGTCCGTT................................................................ 20 1 1 2.00 2 1 0 0 1 0 0 0
...................................................................CCGGATGATGGTTCACAACCACC..................................................................................................... 23 1 1 2.00 2 0 1 0 0 0 0 1
...........................................................................................................CGGTGGGACTTTCGGCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCCTCCGTTTA.............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................TGGTGGGACTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCTGTGGGACTTTCGTCCGTTTT.............................................................. 23 2 2 2.00 4 3 1 0 0 0 0 0
...........................................................................................................CAGTGGGACTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGAGGGACTTTCGTCCGTTTA.............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
...................................................................CCGGATGACGGTTCACAACGACC..................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0
........................................................................................................CTTCGGTGGGACTTTCGTCCGTTT............................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTGTCGTCCGTT................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGGTTT.............................................................. 23 3 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCTTTT............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTAA.............................................................. 23 2 1 2.00 2 1 0 1 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTGG.............................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTGGT............................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................CTCGGTGGGACTTTCGTCCGTTTT.............................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGCCCGT................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGTTTTT............................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCTGTGGGACTTTCTTCCGTTT............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGCGGGACTTTCGTCCGTTTTT............................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................ACGGTGGGACTTTCGTCCGT................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGAACTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................CCGGATGATGGTTTACAACGACC..................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................TTCGGTGGGACTTTCGTCCGTT................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................CCGGATTATGGTTCACAACGAC...................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
..........................................................................................................TCGGTGTGCCTTTCGTCCGTTT............................................................... 22 2 1 2.00 2 1 0 1 0 0 0 0
...........................................................................................................TCTTGGGACTTTCGTCCGTTT............................................................... 21 3 2 2.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCTTGT............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGCCTTTCGTCCGTTC............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCTGTGGGACTTTCGTCCGTTTTT............................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTTGTCCGTTTTT............................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTACGTCCGTTT............................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGTTGGGACTTTCGTCCGTTTG.............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTC............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTGG............................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCCTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGCCCGTTA............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCATT................................................................ 21 1 1 2.00 2 1 1 0 0 0 0 0
..................................................................CCCGGATGATGGTTCACAACGACC..................................................................................................... 24 1 1 2.00 2 1 1 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGG................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGGCCGTTTT.............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGAATTTCGTCCGTTTA.............................................................. 23 2 1 2.00 2 0 0 0 0 0 2 0
...........................................................................................................CGGTGGGACTTTCGTCCATTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................CGGATGATGGTTCACAACG........................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGGGTGACTTTCGTCCGTTT............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTTTTCCGTTT............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGATTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGAGTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTAGTCCGTT................................................................ 21 1 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCGTTTAA............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
..................................................................CCCGGATGATCGTTCACAACGACC..................................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTTCGTCCTTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGCGACTTTCGTCCGTTTT.............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC............................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCTTTT................................................................ 21 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACGTTCGTCCGTT................................................................ 21 1 1 2.00 2 0 0 2 0 0 0 0
...........................................................................................................CTGTGGGACTTTCGTCCGTT................................................................ 20 1 2 2.00 4 4 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTTATT............................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0
...................................................................TCGGATGATGGTTCACAACGACC..................................................................................................... 23 1 1 2.00 2 0 1 0 0 1 0 0
...................................................................CCGGCTGATGGTTCACAACGACC..................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTTCT.............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCC.................................................................. 19 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACTATCGTCCGTTT............................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0
..........................................................................................................TCGGTGGGACTTTCGTCCGTGTA.............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
...................................................................CCGGATGATGGTTCAAAACGACC..................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................................CGGTGGGGCTTTCGTCCGTTT............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................TCGGTGGGACATTCGTCCGGTT............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................TCGGGGGACTTTCGTCCGTTT............................................................... 21 3 2 1.50 3 3 0 0 0 0 0 0
...........................................................................................................CGGTGGGACTTACGTCCGTTT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0

Anti-sense strand reads

CAAGTGGACGCTGCTAAAAATTAGATAAAATTTACACTATGCTCTGGTACCATTACCATGCCACGCTGGCCTACTACCAAGTGTTGCTGGCACAGGAAATTTGCCCAGCCACCCTGAAAGCAGGCAAACATTGCGGTAAACAGTTGCTAAATAGTCACAGGCAAGCTCTTAATAAATACTACGGCAGAACG

************************************************((((((....(((((.(((((((.(((((.((.(((((.(((.......)))))))).))))))).))))))).)))))..))))))....**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 M057

embryo
..........................................................................................................AGCCAGTCTGAAAGCAGGTAA................................................................ 21 3 1 2.00 2 2 0
........................................................................................................CGAGCCAGTCTGAAAGCAG.................................................................... 19 3 8 0.38 3 2 1
....TGTACGCTGCTAACAAGTAG....................................................................................................................................................................... 20 3 4 0.25 1 1 0
...........................................................................................................GCCAGTCTGAAAGCAGGTAA................................................................ 20 3 4 0.25 1 1 0
....TGTACGCTGCTAACAAGTA........................................................................................................................................................................ 19 3 20 0.15 3 3 0
................................................................................CTGTTGCTGGCATAGGAAG............................................................................................ 19 3 9 0.11 1 1 0
.............................................................................................................................AAACACTGCGGTAAACTG................................................ 18 2 10 0.10 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4845:14318870-14319060 - der-mir-278 Known_mirbase GT------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT------CG--------A-----GAATTATTTATGATGCC--GT------------------------------------------------------CTTGC
droYak3 2R:17445933-17446123 - dya-mir-278 Known_mirbase GT------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATGTG--ATACGAC---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT------CG--------A-----GAATTATTTATGATGCC--TT------------------------------------------------------CTTGC
droSec2 scaffold_1:9037571-9037762 + dse-mir-278 Known_mirbase GG------------------------------------------TCACCTG--C--------------------------GAC--G-ACTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATAGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT-----TCG--------A-----GAATTATTTATGATGCC--GT------------------------------------------------------TTTGC
droSim2 2r:12209984-12210175 + dsi-mir-278 Known_mirbase GT------------------------------------------TCACCTG--C--------------------------GAC--G-ACTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT-----TCG--------A-----GAATTATTTATGATGCC--GT------------------------------------------------------CTTGC
dm3 chr2R:11544521-11544712 + dme-mir-278 Known_mirbase GT------------------------------------------TCACCTG--C--------------------------GAC--A-ATTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT-----TCG--------A-----GAATTATTTATGATGCT--GT------------------------------------------------------CTTGC
droEug1 scf7180000409672:431459-431653 + TT------------------------------------------TCACCTG--C--------------------------GACACA-ATTTTTAATCTATTTTAAATGCG--ATACCGG---------------------------TCA-CATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTA-----ACA--------G-----GGATTATTTATGATGTC--GT------------------------------------------------------CTTGC
droBia1 scf7180000302292:4120050-4120232 - GC------------------------------------------TCACCTG--C--------------------------GAC--T-GCTTTTAATCTATTTTAAAT----------------------------------------------GGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------CC-------CGA--AAAGGG-----GTATTATTTATGATGCCCTGT------------------------------------------------------CTTGC
droTak1 scf7180000415241:147483-147664 - GC-----------T------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAAT----------------------------------------------GGTAATGGTTCGGTGCGACCGGATGATGGTTCACAACGACCGTG---TTCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------CAGT----GTC------CG--------G-----GGATTATTTATGATGTCCTGT------------------------------------------------------CTTGC
droEle1 scf7180000491107:511674-511848 + GT------------------------------------------TCACCTG--C--------------------------TAC--G-ACTTTTAATCTATTTTAAAT----------------------------------------------GGTAATGGTTTGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACAGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------GCA------C---------G-----GGATTATTTATGATGCC--GT------------------------------------------------------CTTGC
droRho1 scf7180000779911:581654-581840 - GT------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATG----ATA-GTG---------------------------GCA--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------GTA------C---------G-----GGATTATTTATGATGCC--GT------------------------------------------------------CTTGC
droFic1 scf7180000453809:33492-33687 + GT------------------------------------------TCACCTG--C--------------------------CACCTG-AGTTTTAATCTATTTTAAATGCGAGATAC--G---------------------------GCCATGTGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------ATA-----GCC--------G-----GTATTATTTATGATGTC--GT------------------------------------------------------CTTGC
droKik1 scf7180000302682:1699591-1699810 + GC------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATG-------------------------------------------ATTGTAATGGTATGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTCAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-----------------C--------G-----GGATTATTTATGATGTC--GTCCTTAAACATACACCACTATATTGTATGATGTATATATCTATGT-------GTC--CGC
droAna3 scaffold_13266:12641280-12641488 - dan-mir-278 Known_mirbase GATGCTGCAGAGCT------------------------------GCACCTG--C----------------CC----GACAGAT--G-GGTTTTAATCTATTTTAAATGTA--T---------------------------------GTA--ACGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTCGAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCA---TC---------C-------GGC-----GAG--------C-----GGATTATTTATGATGGA--GA-----------------TATAC---------------------------ACATC--CGC
droBip1 scf7180000396372:139078-139279 - GC------------------------------------------CCACCA------------------------------GAT--G-GGTTTTAATCTATTTTAAATGTA--T---------------------------------GTA--ACGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTGAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCA---TC---------C-------GGC-----TAG--------C-----GGATTATTTATGATGGA--GA-----------------TATAT---ATGT-----------ACATATAGTACATC--CGC
dp5 3:19640840-19641041 - dps-mir-278 Known_mirbase ----------------------------------------------------------------------------------C--G-ACTTTTAATCTATTTTAAATGTG-------------------------------------CA--ACGGTAATGGTACGGTGCGACCGGACGATGGTTCACAACGACCGTG---TCTCTTAAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCATCATCGTCGCGCCCCAGTGCTCGTA-----T----------T-----GGATTATTTATGATACC--GC-----------------CATATCGGATGTTG------------T-------CGC--CGC
droPer2 scaffold_37:642237-642481 - dpe-mir-278 Known_mirbase TC-----------TTGCTCCCTTCCTGCCGGCAATCCAGCAGTCCCACCTG--C--------------------------GGC--G-ACTTTTAATCTATTTTAAATGTG-------------------------------------CA--ACGGTAATGGTACGGTGCGACCGGACGATGGTTCACAACGACCGTG---TCTCTTAAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCATCATCGTCGCGCCCCAGTGCTCGTA-----T----------T-----GTATTATTTATGATACC--GC-----------------CATATCGGATGTTG------------T-------CGC--CGC
droWil2 scf2_1100000004822:1555680-1555921 - dwi-mir-278 Known_mirbase AC-----------TTGTT--------------------------TAACCAACCCGACTCAACCCAACCGCCCACAGAAC---A--G-ATTTTTAATCTATTTTAAATGTG--TAACGAGTTAAAAAAAAATAAGGGGAGATCCCCCATA--ATGGTAATGGTACGGTGCGACCGGATGACGGTTCACAACGACCGTG---TCAATTTTACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCATAATC---------T-------CTA--GGTTGT--------A-----CGATTTTTTATAAT------------------------------------------------------------------
droVir3 scaffold_12875:6427531-6427678 - dvi-mir-278 Known_mirbase CC------------------------------------------TCCCTGG--C--------------------------GGCGTAAATTTTTAATCTATTTTAAATGTG-------------------------------------------GTTTATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGCA-TACTTTTAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCA-------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:23589364-23589499 + dmo-mir-278 Known_mirbase ---------------------------------------------------------------------------------AG--A-AATTTTAATCTATTTTAAATGTG-------------------------------------------GTTTATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTACAGTTTTTTCAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAG------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15112:1314064-1314258 - dgr-mir-278 Known_mirbase AA------------------------------------------ACTAAAA--C--------------------------CAA--A-ATGTTCAATCTATTTGAAATGTG--GT----------------------------------------CTGATGGTACGGTGCGACCGGATGACGGTTCACAACGACCGTGCT-TATTTTTAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAA-ATC---------A-GT----TTAAC---CAGATAAAAAATGTATTCGTTTATTTATGA------GC------------------------------------------------------CTAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GT------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT------CG--------A-----GAATTATTTATGATGCC--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22123337.00233372143744520354373159
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2116276.00627652412335017950217
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2111443.0014431442000010
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2311206.0012064521182322715200
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2311144.00114410630170141733
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................201391.00391376070260
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201352.00352352000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................231119.001197808051810
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................22190.00905011310250
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................21189.0089661009130
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22181.008180000010
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20177.007769040040
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19170.007067010110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23163.006361010010
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22158.005855000120
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................20156.00562803012130
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................21143.004343000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22137.003719020790
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24135.003521010481
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................23134.003424030160
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................22134.003429110030
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................23125.002525000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22124.002422010010
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19118.001818000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19114.00148040020
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................19112.001212000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................2319.0094000050
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2119.0099000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1818.0088000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2418.0088000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................2417.0076000100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2417.0075000200
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2217.0077000000
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................1917.0073000130
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................2416.0064000200
............................................................................................................................................................................CGGATGATGGTTCACAACGA.....................................................................................................................................................................................................2016.0066000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2215.0055000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1815.0055000000
.............................................................................................................................................................................GGATGATGGTTCACAACGACC...................................................................................................................................................................................................2115.0055000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCT..............................................................................................................................................................1815.0052000030
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................2115.0055000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACG...................................................................................................................................................................................................2315.0050000050
...........................................................................................................................................................................CCGGATGATGGTTCACAACGT.....................................................................................................................................................................................................2115.0051000130
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................2315.0052000030
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGTA.......................................................................................................................................................2514.0044000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2214.0044000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................2114.0042000020
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2114.0044000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................1814.0044000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTT.............................................................................................................................................................1924.0088000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................2414.0044000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................2113.0031010100
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1813.0033000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCA........................................................................................................................................................2413.0032010000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2212.0022000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2312.0021010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGT.......................................................................................................................................................2512.0022000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2112.0022000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2312.0022000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................2012.0022000000
............................................................................................................................................................................CGGATGATGGTTCACAACG......................................................................................................................................................................................................1912.0022000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2312.0022000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................2512.0022000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2312.0022000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCC.............................................................................................................................................................1912.0022000000
droYak3
GT------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATGTG--ATACGAC---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT------CG--------A-----GAATTATTTATGATGCC--TT------------------------------------------------------CTTGCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22112054.00120541784853028375657261513122
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2117536.0075364030245133042359360000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2311953.0019539543415254216292340190
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................211653.006531652000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231610.006102551810223680000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................201563.0056323330110111520000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201200.002000200000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................211134.001341242800000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................221102.00102233723131201110
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................21193.0093676002341010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19190.00907116000200010
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................20175.00755313101520000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................22171.007123142802400000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23168.006824000131120000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................23159.00592531001200000
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22148.0048343200000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20147.0047039004400000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23143.0043236001310000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................20143.0043420001000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGC............................................................................................................................................................20141.0041392000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22139.0039221006910000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................23134.0034321000010000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22134.0034034000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................24133.0033312000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22130.0030325001100000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................23129.0029262100000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19124.0024024000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................18123.0023139001000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19119.0019013003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................21118.0018160000200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTGG..........................................................................................................................................................22114.0014140000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24111.001123000510000
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................1919.00917100000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAC........................................................................................................................................................2419.00981000000000
............................................................................................................................................................................CGGATGATGGTTCACAACGA.....................................................................................................................................................................................................2018.00808000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................2118.00842002000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGT........................................................................................................................................................2417.00710001410000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................1916.00605000100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2416.00606000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2316.00606000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................2415.00504001000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1815.00503000200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................2415.00540001000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCC..................................................................................................................................................................................................2415.00550000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2114.00403000100000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2214.00413000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2314.00403000100000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2214.00404000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2314.00404000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2414.00403000100000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCA..................................................................................................................................................................................................2413.00330000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCG..................................................................................................................................................................................................2413.00321000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCGT.................................................................................................................................................................................................2513.00301000020000
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................2113.00303000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAG........................................................................................................................................................2412.00202000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTGA.........................................................................................................................................................2312.00201000100000
..............................................................................................................................................................................GATGATGGTTCACAACGACC...................................................................................................................................................................................................2012.00220000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1812.00202000000000
............................................................................................................................................................................CGGATGATGGTTCACAACGACCG..................................................................................................................................................................................................2312.00220000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................2512.00202000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2112.00220000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1812.00202000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2312.00202000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACG...................................................................................................................................................................................................2312.00220000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2212.00202000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGAC...........................................................................................................................................................2111.00110000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................2111.00101000000000
droSec2
GG------------------------------------------TCACCTG--C--------------------------GAC--G-ACTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATAGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT-----TCG--------A-----GAATTATTTATGATGCC--GT------------------------------------------------------TTTGCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22110834.00108349813255147619
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2114578.0045783999288543
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................211732.00732732000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................231633.0063324840118227
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231405.0040537512018
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................201402.00402396105
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201286.00286286000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................22180.0080397430
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23147.004736209
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22144.0044262016
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19139.003939000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................21137.003737000
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22135.003534001
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................21134.003423506
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................20130.0030116013
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20127.002721213
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22124.002424000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23123.002321200
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19120.002020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................22117.001711312
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19116.001614002
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................23111.00118102
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2218.0088000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2316.0066000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2116.0066000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1815.0055000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................1915.0055000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1815.0054001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................2115.0054001
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................2315.0050005
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................2115.0055000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2314.0043001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2414.0041201
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................2113.0033000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................2313.0032100
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2213.0033000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGA............................................................................................................................................................2013.0033000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................2413.0030003
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................1913.0032010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................2013.0033000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2413.0033000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2213.0033000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1812.0022000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2312.0022000
.............................................................................................................................................................................GGATGATGGTTCACAACGAC....................................................................................................................................................................................................2012.0022000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAT....................................................................................................................................................................................................2212.0022000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2212.0022000
............................................................................................................................................................................CGGATGATGGTTCACAACGA.....................................................................................................................................................................................................2012.0022000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................2512.0022000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2411.0011000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2311.0011000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................2411.0010001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGT.......................................................................................................................................................2511.0011000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGTAT......................................................................................................................................................2611.0011000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGTA.......................................................................................................................................................2511.0011000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2311.0010100
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2011.0011000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTGG.......................................................................................................................................................2511.0011000
...............................................................................................................................................................................ATGATGGTTCACAACGACC...................................................................................................................................................................................................1911.0011000
..............................................................................................................................................................................GATGATGGTTCACAACGACC...................................................................................................................................................................................................2011.0011000
droSim2
GT------------------------------------------TCACCTG--C--------------------------GAC--G-ACTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT-----TCG--------A-----GAATTATTTATGATGCC--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................21146260.0046260360515610108115728212738894022534426101001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22124016.00240168973181011223731442608812066789515710044559307
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2316801.00680137005772703828647814304117681076817523
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................2016318.006318295748961055062023126571147000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................1914069.0040698311193959024841130019000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................1812462.00246220830114321764010025000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................2111146.0011461011125510001003000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................201867.00867658129151148120000111000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................201520.0052042494200000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................221485.0048520542310945704310133400010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGC............................................................................................................................................................201444.0044439845010000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................211257.0025787150157211660000386001
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................231239.0023920530110001000001000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................221207.0020717825100010002000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................211198.0019810016073000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231192.00192671508100203003003000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................211145.00145110231110000000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................191117.001172000000000115000000
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................19197.00975101256320000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTGG..........................................................................................................................................................22194.00947318300000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................20193.00931220710800000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................23190.00907013010002000004000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................21177.0077675020020001000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23171.0071220765400000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................23164.0064555040000000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................18163.0063200100000060000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................24156.0056465200001000002000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCG..................................................................................................................................................................................................24149.00492000123400000001000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23148.00481341700105043001000
..........................................................................................................................................................................................................................GGGACTTTCGTCCGTTT..........................................................................................................................................................17141.0041000000000041000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................18140.0040000000200038000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20137.00374001000010022000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22134.0034175050061000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAA........................................................................................................................................................................................................18133.0033400062300000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGA............................................................................................................................................................20130.0030217000020000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19130.0030173030100006000000
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22126.0026141150012000002000
..................................................................................................................................................................................................GTG---TCCTTTAAACGGG................................................................................................................................................................................16126.0026000000197000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGT................................................................................................................................................................16126.0026000000000026000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24122.002230020047222000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19121.002100084900000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTC...............................................................................................................................................................17118.0018000000000018000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22117.001783050000001000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCT..............................................................................................................................................................18116.0016106000000000000000
..........................................................................................................................................................................................................................GGGACTTTCGTCCGTT...........................................................................................................................................................16116.0016000000000016000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACG...................................................................................................................................................................................................23115.001592000040000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................22113.0013100020100000000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTT...........................................................................................................................................................17111.0011000000100010000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTT.............................................................................................................................................................1919.00990000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGG.....................................................................................................................................................................................................2119.00981000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCT.............................................................................................................................................................1919.00972000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAC........................................................................................................................................................2418.00871000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2218.00800080000000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2117.00761000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAC.........................................................................................................................................................2316.00660000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1816.00600002400000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCC..................................................................................................................................................................................................2415.00541000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGAC...........................................................................................................................................................2115.00550000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGT........................................................................................................................................................2415.00500001200002000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGT.....................................................................................................................................................................................................2115.00520000000000003000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGCC...........................................................................................................................................................2115.00550000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCTC............................................................................................................................................................2014.00440000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCA.............................................................................................................................................................1914.00440000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGT............................................................................................................................................................1814.00430000000001000000
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................2114.00420010000000001000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCG.............................................................................................................................................................2013.00311000100000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGA........................................................................................................................................................2413.00320000010000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGT............................................................................................................................................................1713.00300000000003000000
.............................................................................................................................................................................GGATGATGGTTCACAACGAC....................................................................................................................................................................................................2013.00330000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCA..................................................................................................................................................................................................2413.00320000000000001000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2313.00320010000000000000
............................................................................................................................................................................................................................GACTTTCGTCCGTTT..........................................................................................................................................................1522.50500000000005000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCG.................................................................................................................................................................1522.50500000001004000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2312.00200010010000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................2412.00210010000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2312.00210010000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTAC..........................................................................................................................................................2212.00220000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCC.............................................................................................................................................................1912.00220000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGGC...........................................................................................................................................................2112.00220000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTCA..........................................................................................................................................................2212.00220000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCA..............................................................................................................................................................1812.00211000000000000000
...............................................................................................................................................................................................................AACGGGTCGGTGGGACTTTCGT................................................................................................................................................................2212.00202000000000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCG.............................................................................................................................................................1612.00200000000002000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACA......................................................................................................................................................................................................2012.00220000000000000000
dm3
GT------------------------------------------TCACCTG--C--------------------------GAC--A-ATTTTTAATCTATTTTAAATGTG--ATACGAG---------------------------ACC--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTT-----TCG--------A-----GAATTATTTATGATGCT--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................221418868.0041886800008111181002588819421023435129289080691061479021253129292750053932825016627011011319533134279561031509610216121550320484020304176154000000000000000001192713572121606028109820611101673791888978149542935517877669428866987917918283260218767137511335718729431261792950191147263197215212653235691122011120371331636555483036393647300001661271241131940301005915812812197929408815033000002900539143231953401407214361139757410342922716698151811330347000020357843351423676060139944219700000778401000023194768111335543010898766810599177377559772367421540912173921100487305849123303110219189347619902230025149038427039261254001005646945348513808563501653201894387554564240342941889610219268762234256300232411323134736247215101102129701702687210659494238488177328372392282071104
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................21177343.00773430000731800005670300101211170273329882010131138651919119461304945332242925471336291143224090681418180742522000000000000000007096545963141722100014119698736327862679413208506102212292803961428453241051607932244392472140894694530412691685531313871141282190700922369132200000113016212220751333500000200804291944570237431193160151076222648287551325614615003087752815225324000221050636000002134806000151851011751772298306039521757660643399789694259010021326857162004171013115253316501401501810192613451632102310523122191353523501348298517591495549041148146102331464242091262863958211151112392010245172501801771290476189319164300142932310
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................23112041.00120410000130000251306200040415301117233809390310112211920762919362181273127110430212550000000000000000020523215019015063003394316198752126122431096392125447101712169747601130210153210401130390213221901613373200216346720000051814132851354387000000603002071810138521986998710326011713421459400000307128133400101273650236600200030235272783322517884769923602724009141572712140494108046421625105134117454112560233590102169115689721103128602295675284033188303531751649214528383932108488132131151481138417225926686519144851911046241690
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................23110017.001001700001810000403026101000172300000000000040011020410011310000000000000000000000001111351347295000011512181396471098431840044125433222111311223151001739432360119032181022185111992300000021200000001020114000000000000000328543042043838190526343976529170000018656040000301100000010000000000321461381719316878192691815001110000011500002602010021100900020104410017042407022011716182300612346027745004680000011100052095836000670
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................2017957.00795700001010000000037803500354500014311285162220220010130412113210230012330000000000000000080767632930000024381623652166002111196216145421301268546824461215010212152921530520680011020000000000200000000000030031061902065531323213355535843272000000963311414006064000002400000033105295084192711522290017210010026171500000000301413002000023061300001110200020006471671548801106164521001631111111011000001010103371702330000011
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2012084.002084000000000000000000002020000000000005361514112151022101400000000000000000000000174196149109000000000001000000000000000000000001261020413017019160000000000000000510316110000000000000657206410463924002203810000010633200001000000000000000000001314131268442177210867131000000000001400002300010000002001000005000040001020200124350113011411111600011000000010100202111100010
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2111830.00183000003000000100000000000000022261450100000000100000000010004210000000000000000015201318800121048534155387163721151312660009323502170325020631112411728000001116000000000003003000000000000139120099027170380362012900000020400100001000000000000000000000011011111278110000000000000000000000001010010000000000000100000000000100000000100000000000100000000000001000000000018
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2311689.001689000030000000001300010000500000000000130010010110110100000000000000000000000001421201324000000341415033163800105895010116322048165615043110572483800000100000000000001300100000000000088112086006946261067470500000180301000000300000000000000000042410195166124230001162900020080000120100100200000020000600015002729010007542012000110006322005100001000001061032124010110
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................2211632.00163200001000000000000000010200044100000003220002103301001200011580000000000000000013611885106123000253218112274251113135613522061132002405804086280306310001000210000001100500000000030000035270125418121127441731229900000320000000001000000200000000302000411131035001000014088230069121200280130011100300001130828111030028118120031804131254462551421000632100831721071124019150
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................1911071.00107100000000000000000700000600029724151200000001001000000100001100000000000000000010152056000000550108212351500312241015114100012249113203770212423412011300010000000010001000000000000000351010162335191028174453430000018241000001000000000100000030011290013000270100000001312000001000100000000000000100000001000201001234200001420001001000020000000001006400020000037
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................211992.00992000021000000000000000010000130000000001000000000000000001217130000000000000000051482942420000125281510521233007184730303062230125084000216010116000010020000000001004020000000000000426701621221711742373810000005700000000010000000000000000100000100222310010000000450000650700000300000000000000003000400000019561100000012003023002020000000000001721315000590
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................221989.00989000021500007510101011000040000000000000000000000000000200000000000000000000000712938000000014122800194500043780010111220116236212072110210182000000000000000000000200000000000000034660244238232200620482000001371020000005000000000000000000012314145531110039160000009000001000100010000000000000000100000102000548600000100001310014201000010000001520011000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................181877.008770000000000000000320002000006155511400000000000000000000000000000000000000000022294216000000000010004010000700001100100000130101100165200232298000004000000100000000000000000004706761015517303500000380000000000000000000000000000129002300000000200000000000000000000000000000000000000000000003000000100000000000001000000000000000000000000000011
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................221820.00820000014300013230710020000800000000000000000000000000001000000000000000000000001068720101001143092610766004421131120350120013029400050809191200001010000000000000000000000000000015330190045150190180223000002061000000102000000000000000000111317534311000031000000100000200000000000000010000000000302010000002020010011100020000000000000000000701000000200
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTATC........................................................................................................................................................241749.007490000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386363000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................241561.00561000030000000104000000000000000000000000000000000000000000000000000000000000055120000000000340016060012472001211100010085020221001209900000000000000000000000000000000000028400150041211170300311000006500010000020000000000000000001011171651131601400000000300000000010003000000000003000030011000200024010010000200111200000000000000000300001000240
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................231407.00407000021000001004100000001000000000000001000100000000000000000000000000000000055500000000130222070400321300010021000010243020575011011180000000000000000000000000000000000008901700219170110120000007910100000000000000000000000000003204591111000127000000300000000000000000000000000000000300000000004010000000000000000001000000010001100000000310
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................221383.00383000062000211413001000001000000000000000000000000000010000000000000000000000013100000000067100002110010600000000100000440201020805600010000000000000000000000000000000010140100010406053147100000441000000001000000000000000001001001200060000000000000000001000000000000000000000000000000100001222400000100000020000000000000000011001001000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201346.0034600001000000000100300000100000111501000000000000000000000031000000000000000000211240000000001420557001342000030000010014200010109321300000000000000020000000000000000000024280121016811602012710000060100000000000000000000000000000100010002000000000000000000000000000000000000000000100000000000000010000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................191343.0034300000000000000000000010000000000000301220000010001222000000000000000000000001388300000000000000000000000000000000000010301000004022000000000000000030204000000000000000914013005101150130150600003421700000010000000000000000001431174391249000000000001200000001000001000000000002000000000000000041270020000100003200001000000100000922141000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................181299.002990000000000000000000000000000000000000001001011000010000000000000000000000000420031000000005233255110004151000800020004001000201020160000000000000000100130000000000000003600001211010024017100000317240000104400000000000000007661400000000000000000100000000000000000000000000001000010000000000002100010000000000000000000000000000000000000001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................211266.00266000030000000003000100001000000000000000000100000100000000000000000000000000010001000000110030010200002300000200000007001010004045000000000000000000100000000000000100513060031201001009000000104001000000100000000000000000000020100000000000000000200000000000000000000000000000000100000000101020000001000110000010000000000000220122000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................231228.00228000000000110000000000000000000000000000000000000000000003632260000000000000000011200000000010000010000001300000001000000900000000202400000000000000000000100000000000000085070051060501400000022000000000000000000000000000000004100001000001000000200000000000000000000000001000000000000000032210000000000000000002000000000000010000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................201198.001980000000000000000000000000000100100001000000010000000100000000000000000000000461020000000200400040401021000010000100000001020000310000000000000000010000000000000000000521000012002833500000100000000000000000000000000201000000000001000000000002000016040000000000000000000000301020000001332600010000000002001100100000000012920005010010
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAATC..................................................................................................................................................................................................241188.00188000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013553000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACATC.................................................................................................................................................................................................251141.0014100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................211121.00121000011000000000001000002000000000000000000000000000000000000000000000000000000100000000000000020000000000010000000005100001006025000000000000000000000000000000000000870500200001812500000016000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000012300010000000000000000000000000000100000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................211104.0010400002000001010100100000000000000000000000000000000001000000000000000000000000000100000000002000000000000000000000000500201120201000000000000000000010000000000000000046030021030707000000210000000000000000000000000000000000000000000000000011000011000000000000000000000000000000000000012200000000000010001000000000000001210001000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................231104.001040000100000000000000000000000000000000000013000003130000000000000000000000000130200000000000000100000060000000000000030070241211033000000000000000000001000000000000000320110023206031000002000000000000000000000000000000000000000000001000000000001000000000000000000020000010002000000100100001000100011000000000000000000100000010010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................20199.0099000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000012000010105009000000000000000000000000000000000000240300420002241460000014000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................24191.00910000000000000000000000000000000000000000000000000000000000000000000000000000210010000000000200500000061000000001001002000002010130000000000000000000000000000000001008100400820606030000006000000000000000000000000000000000020200000010000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22185.008500000000000000000000000000000000000000000000000000000000000000000000000000003965000000000011012200000151000000000001010000002010110000000000000000000000000000000000003501003003001300000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................23183.00830000000000000060000000000000000000000000000000000000000000000000000000000000011000000000000100000000020000000000000080000100010330000000000000000000000000000000000002903004304040410000011002000000100000000000000000000100000101100000000000000000100000000000000000000000000000000000000020000000000100000000000000000000000000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................19182.0082000000000000000000001100000000000000000000000000000100000000000000000000000040310000000000000000000000000000000000000000000000002000000000000000011000000000000000000130500210201010000008210000080000000000000000000529500000000000000000000000000000000000000000000001000010000000000001100000000000000000000000000000000000000000016
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22169.00690000000010000000000000000000200000001000000000000000000000000000000000000000302000000000010100000000070000200000000011010002000000000000100000000000000000000000000005100000020201511000000000000010000000100000000000000000000100010000000000000001000000000000000000020000000001000000000000000001100000000200000000110000100000000100
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................19159.0059000000000000000000000000000010000000000000000000000000000100000000000000000024550000000021010000001200000000001000000000000100000010200000000000000000000000000000000450000000012005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000001000000000000000101100011020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAC........................................................................................................................................................24155.005500000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000100000001000000200100110101000000000000000000000000000000000000021010000010201000000100000000000000000000000000000000220001200001512000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droEug1
TT------------------------------------------TCACCTG--C--------------------------GACACA-ATTTTTAATCTATTTTAAATGCG--ATACCGG---------------------------TCA-CATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------C-------GTA-----ACA--------G-----GGATTATTTATGATGTC--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotal
No Reads
droBia1
GC------------------------------------------TCACCTG--C--------------------------GAC--T-GCTTTTAATCTATTTTAAAT----------------------------------------------GGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------CC-------CGA--AAAGGG-----GTATTATTTATGATGCCCTGT------------------------------------------------------CTTGCSizeHit CountTotal NormTotal
No Reads
droTak1
GC-----------T------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAAT----------------------------------------------GGTAATGGTTCGGTGCGACCGGATGATGGTTCACAACGACCGTG---TTCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTC---------CAGT----GTC------CG--------G-----GGATTATTTATGATGTCCTGT------------------------------------------------------CTTGCSizeHit CountTotal NormTotal
No Reads
droEle1
GT------------------------------------------TCACCTG--C--------------------------TAC--G-ACTTTTAATCTATTTTAAAT----------------------------------------------GGTAATGGTTTGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACAGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------GCA------C---------G-----GGATTATTTATGATGCC--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotal
No Reads
droRho1
GT------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATG----ATA-GTG---------------------------GCA--ATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------GTA------C---------G-----GGATTATTTATGATGCC--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotal
No Reads
droFic1
GT------------------------------------------TCACCTG--C--------------------------CACCTG-AGTTTTAATCTATTTTAAATGCGAGATAC--G---------------------------GCCATGTGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-------ATA-----GCC--------G-----GTATTATTTATGATGTC--GT------------------------------------------------------CTTGCSizeHit CountTotal NormTotal
No Reads
droKik1
GC------------------------------------------TCACCTG--C--------------------------GAC--G-ATTTTTAATCTATTTTAAATG-------------------------------------------ATTGTAATGGTATGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTCAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAGTGTC---------C-----------------C--------G-----GGATTATTTATGATGTC--GTCCTTAAACATACACCACTATATTGTATGATGTATATATCTATGT-------GTC--CGCSizeHit CountTotal NormTotal
No Reads
droAna3
GATGCTGCAGAGCT------------------------------GCACCTG--C----------------CC----GACAGAT--G-GGTTTTAATCTATTTTAAATGTA--T---------------------------------GTA--ACGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTCGAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCA---TC---------C-------GGC-----GAG--------C-----GGATTATTTATGATGGA--GA-----------------TATAC---------------------------ACATC--CGCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22130251.003025128817820626426300
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................21111767.00117671114010047433110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2312419.002419230710503130
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2112141.002141214100000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2311970.001970117310242650615
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................2011253.0012531233001334
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201779.0077977900000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................231355.0035534300507
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................221211.0021121100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................231206.0020619600262
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................231188.00188162107414
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................221160.0016015000712
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................221157.00157113407627
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................221149.0014913680203
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................191125.0012512400001
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................211114.00114100001211
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................221111.0011111100000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................201105.0010510000410
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22195.009575008111
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAC........................................................................................................................................................24186.00868400011
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19179.00797900000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24177.00776410228
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19148.00484400400
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................24148.00484500111
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................24133.00333200010
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................20132.00322100218
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................23131.00313100000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................22127.00272700000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................23123.00232300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAC.........................................................................................................................................................23120.00201900010
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................22115.00151500000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................19115.00151500000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................24115.00151400001
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................22114.00141400000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................21114.00141300100
.............................................................................................................................................................................GGATGATGGTTCACAACGACC...................................................................................................................................................................................................21113.00131300000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................23113.00131100002
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................21113.00131300000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................24113.0013800005
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................21110.0010800200
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2319.009700002
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2219.009900000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTAC........................................................................................................................................................2319.009900000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1819.009900000
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................1918.008600101
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGT............................................................................................................................................................1818.008800000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGT........................................................................................................................................................2418.008600020
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCA........................................................................................................................................................2418.008800000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTGT.........................................................................................................................................................2317.007500110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................2117.007520000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTAC.......................................................................................................................................................2517.007700000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1817.007500002
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1816.006600000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2316.006500010
............................................................................................................................................................................CGGATGATGGTTCACAACGA.....................................................................................................................................................................................................2016.006600000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGA........................................................................................................................................................2416.006600000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCT..............................................................................................................................................................1815.005400001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAG........................................................................................................................................................2415.005500000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2315.005500000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTT.............................................................................................................................................................1915.005400001
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2115.005500000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2315.005500000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2114.004400000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................1814.004400000
............................................................................................................................................................................CGGATGATGGTTCACAACGACT...................................................................................................................................................................................................2214.004400000
..............................................................................................................................................................................GATGATGGTTCACAACGACC...................................................................................................................................................................................................2014.004310000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2114.004400000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTAT.......................................................................................................................................................2514.004300001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAAA........................................................................................................................................................2414.004300001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTAA..........................................................................................................................................................2213.003200100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2413.003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTGA.........................................................................................................................................................2313.003200100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCG........................................................................................................................................................2413.003200100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGC........................................................................................................................................................2413.003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAAC.......................................................................................................................................................2513.003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................2113.003300000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTA...........................................................................................................................................................2012.002200000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................2312.002200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTAG.......................................................................................................................................................2512.002200000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................2312.002200000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTAC.........................................................................................................................................................2212.002200000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCA..................................................................................................................................................................................................2412.002000101
droBip1
GC------------------------------------------CCACCA------------------------------GAT--G-GGTTTTAATCTATTTTAAATGTA--T---------------------------------GTA--ACGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTG---TCCTTTGAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCA---TC---------C-------GGC-----TAG--------C-----GGATTATTTATGATGGA--GA-----------------TATAT---ATGT-----------ACATATAGTACATC--CGCSizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------C--G-ACTTTTAATCTATTTTAAATGTG-------------------------------------CA--ACGGTAATGGTACGGTGCGACCGGACGATGGTTCACAACGACCGTG---TCTCTTAAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCATCATCGTCGCGCCCCAGTGCTCGTA-----T----------T-----GGATTATTTATGATACC--GC-----------------CATATCGGATGTTG------------T-------CGC--CGCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22121013.002101348182289773613996173142460120
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2119700.00970016283788464053427101089
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACC...................................................................................................................................................................................................2311838.00183815041017818058451357129618
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................2011425.0014251013730180172140
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2111354.0013540135200020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2311039.0010390883032043136602
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201625.00625062400010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................221155.001552741360051000
...........................................................................................................................................................................CCGGACGATGGTTCACAACGAC....................................................................................................................................................................................................221136.001366775160121199
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................231128.001283105010090010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................211102.0010206393000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................191101.00101010001000000
...........................................................................................................................................................................CCGGACGATGGTTCACAACGA.....................................................................................................................................................................................................21196.009608502021033
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22180.008008000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23168.006804601082281
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19165.0065104703002201
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20158.005804900080010
............................................................................................................................................................................CGGACGATGGTTCACAACGACC...................................................................................................................................................................................................22149.004904511000011
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19142.004203700050000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23139.003903501020100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................24136.0036013019040000
...........................................................................................................................................................................CCGGACGATGGTTCACAACG......................................................................................................................................................................................................20132.003212701011001
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................23120.002002000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22119.001901701010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24117.001701500010010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGC............................................................................................................................................................20116.001633010000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................18116.00162801000131
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................19115.001501500000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCC.......................................................................................................................................................25115.00150308010030
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................24113.001301300000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22113.001301200010000
...........................................................................................................................................................................CCGGACGATGGTTCACAAC.......................................................................................................................................................................................................19112.001201110000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................24112.00120703010010
............................................................................................................................................................................CGGACGATGGTTCACAACGA.....................................................................................................................................................................................................20111.001101100000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................2119.0090701000010
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2217.0070700000000
............................................................................................................................................................................CGGACGATGGTTCACAACGAC....................................................................................................................................................................................................2116.0060600000000
.............................................................................................................................................................................GGACGATGGTTCACAACGACC...................................................................................................................................................................................................2116.0060410010000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1816.0060600000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGA............................................................................................................................................................2016.0060600000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCA........................................................................................................................................................2416.0060500010000
............................................................................................................................................................................CGGACGATGGTTCACAACG......................................................................................................................................................................................................1916.0060600000000
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACA...................................................................................................................................................................................................2315.0050400001000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2115.0050400010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................2415.0050400010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCC.........................................................................................................................................................2315.0050401000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2215.0050500000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1815.0050500000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2114.0040400000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2414.0040400000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2314.0040200000020
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGT............................................................................................................................................................1814.0040300010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGT........................................................................................................................................................2413.0030100000020
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACCA..................................................................................................................................................................................................2413.0031200000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCAAA...........................................................................................................................................................2113.0030000000300
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTC...............................................................................................................................................................1713.0030000000021
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACCG..................................................................................................................................................................................................2413.0030300000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTT.............................................................................................................................................................1933.0090800010000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1813.0030300000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2313.0030300000000
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACCT..................................................................................................................................................................................................2413.0031200000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2213.0030300000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCG.............................................................................................................................................................2012.0020200000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2412.0020200000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2312.0020200000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................2312.0020200000000
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACCC..................................................................................................................................................................................................2412.0020001000001
...........................................................................................................................................................................CCGGACGATGGTTCACAA........................................................................................................................................................................................................1812.0020100010000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTC...........................................................................................................................................................2012.0020200000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2312.0020200000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2112.0020200000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCCA........................................................................................................................................................2412.0020200000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2112.0020200000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................2112.0020200000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................2012.0022000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTCC.......................................................................................................................................................2512.0020000000020
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGG.......................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTGG..........................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAC.........................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................CTGGTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2411.0010000010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCGG.......................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTTC.........................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................GACGATGGTTCACAACGACC...................................................................................................................................................................................................2011.0010010000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCT.......................................................................................................................................................2511.0010100000000
droPer2
TC-----------TTGCTCCCTTCCTGCCGGCAATCCAGCAGTCCCACCTG--C--------------------------GGC--G-ACTTTTAATCTATTTTAAATGTG-------------------------------------CA--ACGGTAATGGTACGGTGCGACCGGACGATGGTTCACAACGACCGTG---TCTCTTAAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCATCATCGTCGCGCCCCAGTGCTCGTA-----T----------T-----GTATTATTTATGATACC--GC-----------------CATATCGGATGTTG------------T-------CGC--CGCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2217676.007676296005468287482
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2113317.003317481982041283441
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACC...................................................................................................................................................................................................2311093.001093945611032450
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................211445.0044504430110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................201327.003271229022732
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231304.003040243021346
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201141.0014101400010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23139.003902005122
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19129.00290260030
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20128.00280180190
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................22123.00230170231
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22120.00200200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................23117.00170120041
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22117.0017090260
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22117.00170160001
...........................................................................................................................................................................CCGGACGATGGTTCACAACGAC....................................................................................................................................................................................................22116.0016950110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23115.00150150000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19113.00130130000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................1919.009040230
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2418.008030131
...........................................................................................................................................................................CCGGACGATGGTTCACAACGA.....................................................................................................................................................................................................2118.008060011
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................1817.007240010
...........................................................................................................................................................................CCGGACGATGGTTCACAAC.......................................................................................................................................................................................................1917.007060100
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2317.007070000
............................................................................................................................................................................CGGACGATGGTTCACAACGACC...................................................................................................................................................................................................2216.006060000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2416.006060000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................1915.005050000
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACA...................................................................................................................................................................................................2315.005400100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCC.........................................................................................................................................................2313.003020100
...........................................................................................................................................................................CCGGACGATGGTTCACAACG......................................................................................................................................................................................................2013.003030000
.............................................................................................................................................................................GGACGATGGTTCACAACGACC...................................................................................................................................................................................................2112.002020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCT..............................................................................................................................................................1812.002000110
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2112.002020000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1812.002010010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2412.002010010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................2412.002020000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2212.002020000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1812.002020000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2212.002020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................2112.002020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................2112.002100100
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2212.002110000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................2512.002020000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGGA...........................................................................................................................................................2111.001000100
............................................................................................................................................................................CGGACGATGGTTCACAACGA.....................................................................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGA............................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTGG.......................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGA............................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................2111.001000010
...........................................................................................................................................................................CCGGACGATGGTTCACAACGACT...................................................................................................................................................................................................2311.001000010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGCC...........................................................................................................................................................2111.001000010
droWil2
AC-----------TTGTT--------------------------TAACCAACCCGACTCAACCCAACCGCCCACAGAAC---A--G-ATTTTTAATCTATTTTAAATGTG--TAACGAGTTAAAAAAAAATAAGGGGAGATCCCCCATA--ATGGTAATGGTACGGTGCGACCGGATGACGGTTCACAACGACCGTG---TCAATTTTACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCATAATC---------T-------CTA--GGTTGT--------A-----CGATTTTTTATAAT------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................21113749.0013749100753387179261
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22112607.00126074329777013565308
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................2011007.001007579427010
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACC...................................................................................................................................................................................................231887.0088733314519128262
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................211591.005911590000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................231332.003321281930011
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................191287.0028723849000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201272.002721271000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231221.0022129178608
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................221179.001798987102
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................211167.001671643000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................20194.0094940000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................24188.00883649003
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGC............................................................................................................................................................20168.0068671000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGAC....................................................................................................................................................................................................22144.0044329264
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................18141.00413110000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCC.........................................................................................................................................................23140.0040730003
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20134.0034327004
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19131.0031031000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTGG..........................................................................................................................................................22129.0029290000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23127.0027224010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................21127.0027270000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23124.0024316014
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCC.......................................................................................................................................................25122.0022109003
...........................................................................................................................................................................CCGGATGACGGTTCACAACGA.....................................................................................................................................................................................................21121.0021021000
...........................................................................................................................................................................CCGGATGACGGTTCACAACG......................................................................................................................................................................................................20120.0020153002
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22120.0020412031
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19118.0018315000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................22117.0017143000
............................................................................................................................................................................CGGATGACGGTTCACAACGACC...................................................................................................................................................................................................22115.0015013011
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22113.001394000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................22112.0012012000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCT..................................................................................................................................................................................................24112.001291101
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22110.0010010000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................2419.00927000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCG..................................................................................................................................................................................................2417.00723011
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................1917.00707000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2117.00770000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2317.00707000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2416.00623001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2316.00641001
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACA...................................................................................................................................................................................................2316.00632001
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2115.00504001
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1815.00505000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1814.00404000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACT...................................................................................................................................................................................................2314.00431000
............................................................................................................................................................................CGGATGACGGTTCACAACGA.....................................................................................................................................................................................................2013.00303000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2213.00303000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2313.00302010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCA........................................................................................................................................................2413.00302001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTCC.......................................................................................................................................................2513.00330000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................2313.00303000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAAA........................................................................................................................................................2413.00301020
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGG............................................................................................................................................................2113.00330000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCTC........................................................................................................................................................2412.00220000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCC..............................................................................................................................................................1912.00220000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCA.........................................................................................................................................................2312.00202000
...........................................................................................................................................................................CCGGATGACGGTTCACAACC......................................................................................................................................................................................................2012.00220000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCGTG---TC...........................................................................................................................................................................................2812.00201001
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2412.00202000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCG........................................................................................................................................................2412.00202000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGT........................................................................................................................................................2412.00200101
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCCC........................................................................................................................................................2412.00211000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1812.00202000
..............................................................................................................................................................................GATGACGGTTCACAACGACC...................................................................................................................................................................................................2012.00201001
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCG.............................................................................................................................................................2012.00220000
...........................................................................................................................................................................................................ATTTTACTGGTCGGTGGGACTTTCGTC...............................................................................................................................................................2712.00200020
............................................................................................................................................................................CGGATGACGGTTCACAACGAC....................................................................................................................................................................................................2112.00202000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCT.............................................................................................................................................................1921.50330000
...........................................................................................................................................................................................................ATTTTACTGGTCGGTGGGACTTTCGT................................................................................................................................................................2611.00100100
.............................................................................................................................................................................................................TTTACTGGTCGGTGGGACTTTCGTC...............................................................................................................................................................2511.00100100
...................................................................................................................................................TA--ATGGTAATGGTACGGTGCGA..........................................................................................................................................................................................................................2211.00100001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTAT.......................................................................................................................................................2511.00101000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTAC..........................................................................................................................................................2211.00101000
............................................................................................................................................................................CGGATGACGGTTCACAACG......................................................................................................................................................................................................1911.00101000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCT.......................................................................................................................................................2511.00110000
...................................................................................................................................................................................................................GGTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2411.00101000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCA..................................................................................................................................................................................................2411.00110000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTA..........................................................................................................................................................1811.00101000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2411.00101000
..........................................................................................................................................................................ACCGGATGACGGTTCACAACGACC...................................................................................................................................................................................................2411.00101000
.................................................................................................................................................................................................CGTG---TCAATTTTACTGGTCGGTGGGA.......................................................................................................................................................................2611.00100100
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2111.00101000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGT............................................................................................................................................................1811.00101000
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCGC.................................................................................................................................................................................................2511.00110000
droVir3
CC------------------------------------------TCCCTGG--C--------------------------GGCGTAAATTTTTAATCTATTTTAAATGTG-------------------------------------------GTTTATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGCA-TACTTTTAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCA-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22171326.007132656485412715784438691107425811252000633217262523526411070480721962695309530275799450227499537437510879437710000000000110010614461135491239488238275811811372474415276576392819101916
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................21126746.002674616243623442719137761362483114732000223081458458243839235211259359363129313676422284137503321565690011000010000002313912026337828400239945248624945542502126
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2317495.0074954643175951718713039200097442546242911576512171529184033185507000018621012315228011317241724920052028122276001521541149056453933594234847894175139
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2312449.0024491566043919161022000340322113584936406452194154643130900106120000000000000000020119904110000139437402010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2312109.002109130402691110120050000310000822132412652362001405360421000077000000000000000200002716900065719141200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................2011880.00188015539265805369864410000000000541521946771422143102600005450000000000000002030031026000027334417382000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2211194.0011941112916062781003000000000059044503319092942680350000150000000000000000003001021130001571210400000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2111130.0011300096300010000000147614613022131458812852000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................241979.00979761214700320003000000000138026100118057662630260000041000000000000000002001102100066273122900000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................241622.0062226117900110003000020020090400000273904116801100001200000000000000000000034101800021110200000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................201467.004670051069501100002614816141744265147910102918115406000034000000000000000000003100700002000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................231423.0042310900103000000000000030685921181722271765110111170000000000000000000065042512000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201419.00419303720000000000054014207800000520500000001000000000000000000000000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................221411.0041117178660200000000102454015522261613170200000000000000000000017479505904210014616421602442
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTCC.......................................................................................................................................................251380.00380311150007000100001000001101400100254626950140000070000000000000000010001002000038717100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................191361.003613112595015520133000000000706000212413040000030000000000000001020000800000261075700000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................211314.00314871121030180003000000000070500000108410070000110000000000000000001002000000011273200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................221266.00266152900610030000000000100301331420291968111020160000000000000000000011310400001000000100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCC.......................................................................................................................................................251172.0017211642007000000000000007040000136183709000004000000000000000000000022000001416100000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................191147.001470320031111130000482724581560000595306000029000000000000000000002000000002000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................181128.00128196370012000000000000020380000010101000012000000000000000010001000100024323000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................181106.00106002011112123000667459051701023643500000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGG............................................................................................................................................................201103.00103346900000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23196.00960152000100000000000000014031311201000000002000000000000000000003001000010000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24196.00960015000100200000000000020126126531400003211000000000000000000002203301000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22194.009405370122000000000000010800200653701000002000000000000000000006200100001100100000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................19190.009000130426100000042464225780210740100000014000000000000000000000000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................20190.0090935140000000000042001204000000101100000000000000000000000000004100000003305000000
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22183.008302500000000000000010000100000000100000000000000000000100110200002000027137000010
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................24177.00772013210000000000110000100000000000000000000000000000000000100000000001162513900000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................23176.0076141120000000000000010100200000000100000000000000000000000103000000001165477400023
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................21174.007410430020000000042012000101210120000000000000000000000000000002200000013102000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCG..................................................................................................................................................................................................24167.006731010000000000010000000000001010000000000000000000000000000001000000151144131100000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22161.006100540000000000000000101100000100300000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGC............................................................................................................................................................20155.0055153900000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19144.004400440000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................23134.00341030030001000000000040100000142802000004000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................18134.00340120040000000031110213511000311200000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................21131.00310030000000000022021218200100300300000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................21129.002961710000000000000000010100000000000000000000000000000000000001000000010010000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................23126.00260110010000000000000000500000132900010000000000000000000000000000100000000000010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCC.........................................................................................................................................................23125.00253070010000000000000000000000020701000000000000000000000000000000100000012000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................22125.002500240000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCA........................................................................................................................................................24124.00240090000000000000000010200000210400000000000000000000000000001000400000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTCT.......................................................................................................................................................25124.00241070000000000000000000100000131800000002000000000000000000000000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................23124.00247330000000000010000000000000000000000000000000000000000001000000000012110300001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................21123.00231460000000000000000030400000001003000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................24121.00210010000000000000000000600001021700000001000000000000000000000002000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................23120.002000200000000000000000200000100121200000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................22120.00201970000000000000000000000000000000000000000000000000000000000000000011010000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTGG..........................................................................................................................................................22118.001813500000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCT.......................................................................................................................................................25115.00150010000000000000000000000000013801000000000000000000000000000001000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................21115.001500110000000000000000000100000101100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................24115.00150040010000000000000000100000032300000001000000000000000000000000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................19114.00140151000000000020000200000000000000000000000000000000000001000000010000100000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................23114.001401120000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTT.............................................................................................................................................................19113.00130740010000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................21113.00132810000000000000000000100000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................24113.001300130000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCA..................................................................................................................................................................................................24112.00121010000001000000000000001000000000000000000000000000000000000000000020002101101
............................................................................................................................................................................CGGATGATGGTTCACAACGACCG..................................................................................................................................................................................................23110.00100210000000000000000000000010000000000000000000000000000000000000000002100300000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................22110.00100090000000000000000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................23110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................23110.00100080000000000000001000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................21110.00101000000000000000000012100000001300000000000000000000000000001000000000000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCGT.................................................................................................................................................................................................25110.00100110000000000000010000000000000000000000000000000000000000000000000001113100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAC........................................................................................................................................................2419.0092230000000000000000000000000000000000000000000000000000010000000000000000100000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................2219.0090020000000000000000021000000010102000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAAC.......................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000300000004100000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTCC.......................................................................................................................................................2418.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCT..............................................................................................................................................................1818.0080300000103000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTGCA-TACTTTTAACTGG................................................................................................................................................................................1818.0080030000000000000010000000010000000000000000000000000000000000000000001002000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTCC..........................................................................................................................................................2217.0070020000000000000000010000000010100000000000000000000000000000000000000200000000
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTTT.........................................................................................................................................................1917.0070000000000000001010011200000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................2117.0070050000000000001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................CGGATGATGGTTCACAACGA.....................................................................................................................................................................................................2017.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCCC........................................................................................................................................................2416.0061020000000000000000000000000000100000000000000000000000000000000000000110000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1816.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTAA..........................................................................................................................................................2216.0060120000000000000000000000000000001000000000000000000000000001100000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTA.............................................................................................................................................................1916.0060110040000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2116.0060010000000000001000010000000010100000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGT............................................................................................................................................................1816.0060030000000000010000000000000000100000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGA............................................................................................................................................................2016.0060330000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GGATGATGGTTCACAACGACC...................................................................................................................................................................................................2115.0050040000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2115.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCA..............................................................................................................................................................1815.0052200000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2015.0050000000000000000000020000000000300000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2215.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCA.........................................................................................................................................................2315.0050020000000000000000000000000101100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2015.0050010000000000000001000200000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCG.............................................................................................................................................................2015.0050400000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................CCGGATGATGGTTCACAA........................................................................................................................................................................................................1814.0040000000000000000000000000010001000000000000000000000000000001000000001000000000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCC..................................................................................................................................................................................................2414.0041200000000000000000000000000000000000000000000000000000100000000000000000000000
droMoj3
---------------------------------------------------------------------------------AG--A-AATTTTAATCTATTTTAAATGTG-------------------------------------------GTTTATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTACAGTTTTTTCAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAG------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................22120058.0020058183993599613192252
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2116246.006246499205955651084
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2311689.00168982454415063288
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2111371.001371137100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2311066.001066100601929012
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231678.006785960373447
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................201637.006375920162612
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201351.0035135100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................241232.0023221109804
...........................................................................................................................................................................CCGGATGATGGTTCACAACGAC....................................................................................................................................................................................................221178.00178129189229
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTC...........................................................................................................................................................211177.001771470161130
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................221149.00149123045170
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................241108.0010810103301
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23197.00979103300
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23190.00907208604
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20188.00888003500
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................22185.00858500000
............................................................................................................................................................................CGGATGATGGTTCACAACGACC...................................................................................................................................................................................................22176.00767500010
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTCC.......................................................................................................................................................25166.00666202101
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19156.00565600000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGA.....................................................................................................................................................................................................21151.00514900101
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................22145.004524081003
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................22141.00412804801
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22138.00383800000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCCC.......................................................................................................................................................25131.00313001000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCA........................................................................................................................................................24127.00272600001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................24126.00262600000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19123.00232101100
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................23119.00191900000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................19118.00181303200
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................24118.00181501200
............................................................................................................................................................................CGGATGATGGTTCACAACGAC....................................................................................................................................................................................................21116.00161600000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................21116.00161600000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTCC........................................................................................................................................................23115.00151500000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................25113.00131300000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................23113.00131300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTA...........................................................................................................................................................21111.0011602300
...........................................................................................................................................................................CCGGATGATGGTTCACAACG......................................................................................................................................................................................................20110.0010502201
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2419.009500301
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2119.009801000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACT...................................................................................................................................................................................................2319.009800001
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTC...........................................................................................................................................................2019.009900000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGT........................................................................................................................................................2419.009204300
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1818.008800000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................1917.007700000
..................................................................................................................................................................................................GTACAGTTTTTTCAACGGG................................................................................................................................................................................1916.006400002
.............................................................................................................................................................................GGATGATGGTTCACAACGACC...................................................................................................................................................................................................2116.006600000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2215.005500000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGA........................................................................................................................................................2415.005301100
............................................................................................................................................................................CGGATGATGGTTCACAACGA.....................................................................................................................................................................................................2015.005500000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................2415.005400100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................1814.004400000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCT..................................................................................................................................................................................................2414.004400000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2214.004400000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACCA..................................................................................................................................................................................................2413.003300000
...........................................................................................................................................................................CCGGATGATGGTTCACAAC.......................................................................................................................................................................................................1913.003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAA.........................................................................................................................................................2313.003101001
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................2113.003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTCT.......................................................................................................................................................2513.003200001
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2313.003200100
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTCCC.......................................................................................................................................................2413.003300000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTGT.........................................................................................................................................................2313.003101100
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................2412.002200000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................2112.002200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCT..............................................................................................................................................................1812.002001100
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCTT.............................................................................................................................................................1912.002101000
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGT............................................................................................................................................................2112.002200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCA.........................................................................................................................................................2312.002200000
..........................................................................................................................................................................ACCGGATGATGGTTCACAACGACC...................................................................................................................................................................................................2412.002200000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTTCC.......................................................................................................................................................2412.002200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGT.......................................................................................................................................................2512.002200000
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2212.002200000
...........................................................................................................................................................................CCGGATGATGGTTCACAACGACA...................................................................................................................................................................................................2312.002200000
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTC...........................................................................................................................................................1912.002200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTCT.........................................................................................................................................................2312.002101000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGC........................................................................................................................................................2412.002200000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................2112.002200000
...........................................................................................................................................................................CCGGATGATGGTTCACAA........................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGTT.......................................................................................................................................................2511.001001000
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGAGG......................................................................................................................................................2611.001100000
............................................................................................................................................................................CGGATGATGGTTCACAACGACCA..................................................................................................................................................................................................2311.001100000
droGri2
AA------------------------------------------ACTAAAA--C--------------------------CAA--A-ATGTTCAATCTATTTGAAATGTG--GT----------------------------------------CTGATGGTACGGTGCGACCGGATGACGGTTCACAACGACCGTGCT-TATTTTTAACTGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAGCGATTTATCAA-ATC---------A-GT----TTAAC---CAGATAAAAAATGTATTCGTTTATTTATGA------GC------------------------------------------------------CTAACSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2214787.0047874559228
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2111361.001361132338
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................211376.003763760
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................231265.002652596
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGT............................................................................................................................................................201185.001851841
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTT...........................................................................................................................................................201114.001141140
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACC...................................................................................................................................................................................................23171.00715813
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................23142.0042420
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCG.............................................................................................................................................................19125.0025250
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTT.........................................................................................................................................................22120.0020200
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGT............................................................................................................................................................19117.0017170
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCC..............................................................................................................................................................18115.0015150
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................23114.0014131
...........................................................................................................................................................................CCGGATGACGGTTCACAACGAC....................................................................................................................................................................................................22112.0012120
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTC.........................................................................................................................................................23112.0012120
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTT..........................................................................................................................................................20110.001073
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTT...........................................................................................................................................................1918.00880
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTG........................................................................................................................................................2417.00770
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2417.00770
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................2516.00660
...........................................................................................................................................................................CCGGATGACGGTTCACAACGA.....................................................................................................................................................................................................2115.00550
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTTT..........................................................................................................................................................2315.00550
..................................................................................................................................................................................................GTGCT-TATTTTTAACTGG................................................................................................................................................................................1815.00550
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTA.........................................................................................................................................................2214.00440
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTC..........................................................................................................................................................2214.00440
............................................................................................................................................................................CGGATGACGGTTCACAACGACC...................................................................................................................................................................................................2214.00440
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTT...........................................................................................................................................................1812.00220
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTG..........................................................................................................................................................2212.00220
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCG.............................................................................................................................................................1812.00220
.........................................................................................................................................................................................................................TGGGACTTTCGTCCGTTT..........................................................................................................................................................1812.00220
........................................................................................................................................................................................................................GTGGGACTTTCGTCCGTTT..........................................................................................................................................................1912.00220
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2212.00220
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGA........................................................................................................................................................2412.00220
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACT...................................................................................................................................................................................................2312.00220
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGCC......................................................................................................................................................2612.00220
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTA..........................................................................................................................................................2212.00220
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGT............................................................................................................................................................1812.00220
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAA........................................................................................................................................................2412.00220
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTAT.........................................................................................................................................................2311.00110
...........................................................................................................................................................................CCGGATGACGGTTCACAACG......................................................................................................................................................................................................2011.00110
.............................................................................................................................................................................GGATGACGGTTCACAACGACC...................................................................................................................................................................................................2111.00110
..........................................................................................................................................................................ACCGGATGACGGTTCACAACGACC...................................................................................................................................................................................................2411.00110
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTGGC.......................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAG........................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTA........................................................................................................................................................2411.00110
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCA..................................................................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTG...........................................................................................................................................................2111.00110
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTGCT.......................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCTC............................................................................................................................................................2011.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTACT.......................................................................................................................................................2511.00110
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2211.00110
.................................................................................................................................................................................................................CTGGTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2511.00110
......................................................................................................................................................................................................................................CGTTTGTAACGCCATTTGTCA..........................................................................................................................................2111.00110
....................................................................................................................................................................................................................GTCGGTGGGACTTTCGTCCGTT...........................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGCG......................................................................................................................................................2611.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTCG........................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGAC.......................................................................................................................................................2511.00110
...........................................................................................................................................................................CCGGATGACGGTTCACAACGACCT..................................................................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGATT......................................................................................................................................................2611.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTC........................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTTGG.......................................................................................................................................................2511.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGT.......................................................................................................................................................2511.00110
............................................................................................................................................................................CGGATGACGGTTCACAACGACT...................................................................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGCT......................................................................................................................................................2611.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTAAG.......................................................................................................................................................2511.00110
.......................................................................................................................................................................................................................GGTGGGACTTTCGTCCGTTTG.........................................................................................................................................................2111.00110
............................................................................................................................................................................CGGATGACGGTTCACAACGACCT..................................................................................................................................................................................................2311.00110
.....................................................................................................................................................................................................................TCGGTGGGACTTTCGTCCGTTTGGTG......................................................................................................................................................2611.00110
......................................................................................................................................................................................................................CGGTGGGACTTTCGTCCGTTTGG........................................................................................................................................................2311.00110
............................................................................................................................................................................CGGATGACGGTTCACAACGACCA..................................................................................................................................................................................................2311.00110
................................................................................................................................................................................TGACGGTTCACAACGACC...................................................................................................................................................................................................1811.00110

Generated: 10/20/2015 at 07:41 PM