ID:

der-mir-13a

 Coordinate:

scaffold_4770:10769404-10769478 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.5 -31.2 -31.1

Flybase annnotation

pre_miRNA [Dere\mir-13a-RM]; utr3 [utr3_minus_7789]; miRNA [Dere\miR-13a-RA]

No Repeatable elements found

Sense Strand Reads

AACGATTGGATGCTAAGCCAACAAGTGTTCGTGATCCAAGACACAATTCTTACGTAACTCCTCAAAGGGTTGTGAAATGTCGACTATTATCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAATTTAAAAAGCGGGTTAAGAAAACATATTTCAAAAGCGATTGAACAA

******************************************..(((((.((((.(((((.((((((((((((((.(((................))).)))))))).)))))).))))).)))).)))))....**************************************** 		Read size # Mismatch Hit Count Total Norm Total V108

head

 M057

embryo

 V060

head

 V040

embryo

 M055

female body

 V107

male body		 GSM1528801

follicle cells
.................................................................................................TATCACAGCCATTTTGATGAGTT....................................................... 23 0 1 43373.00 43373 17388 14749 4233 4036 2247 681 39
.................................................................................................TATCACAGCCATTTTGATGAGT........................................................ 22 0 1 14339.00 14339 9099 1875 1350 555 1317 142 1
.................................................................................................TATCACAGCCATTTTGATGAG......................................................... 21 0 1 1143.00 1143 870 46 72 19 128 8 0
.................................................................................................TATCACAGCCATTTTGATGAGTC....................................................... 23 1 1 778.00 778 191 572 8 2 5 0 0
.................................................................................................TGTCACAGCCATTTTGATGAGTT....................................................... 23 1 1 564.00 564 19 533 5 4 3 0 0
.................................................................................................TATTACAGCCATTTTGATGAGTT....................................................... 23 1 1 559.00 559 12 539 1 3 2 2 0
.................................................................................................TACCACAGCCATTTTGATGAGTT....................................................... 23 1 1 489.00 489 28 448 3 8 1 1 0
.................................................................................................TATCACAGCCAGCTTGATGAGCT....................................................... 23 3 1 446.00 446 239 25 15 15 14 129 9
.................................................................................................TATCACAGCCATTTTGATGAGTTT...................................................... 24 0 1 394.00 394 122 177 47 9 26 13 0
.................................................................................................TATCACAGCCAGCTTGAGGAG......................................................... 21 3 3 339.67 1019 768 1 27 0 60 163 0
.................................................................................................TATCACAGCCATTTTGATTAGTT....................................................... 23 1 1 322.00 322 171 20 36 90 4 1 0
.................................................................................................TATCACAGCCATTTTGAAGAGT........................................................ 22 1 3 307.00 921 775 5 1 17 117 6 0
..................................................................................................ATCACAGCCATTTTGATGAGTT....................................................... 22 0 1 273.00 273 12 92 4 1 164 0 0
.................................................................................................TATCACATCCATTTTGATGAGTT....................................................... 23 1 1 267.00 267 232 1 3 26 3 2 0
................................................................................................CTATCACAGCCATTTTGATGAGTT....................................................... 24 1 1 241.00 241 21 192 9 11 8 0 0
.................................................................................................TATCACAGCCATTTTGATGAGC........................................................ 22 1 1 235.00 235 19 210 6 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATGATTT....................................................... 23 1 1 199.00 199 53 28 34 42 41 1 0
.........................................................CTCCTCAAAGGGTTGTGAAATG................................................................................................ 22 0 1 189.00 189 77 9 7 69 15 12 0
.................................................................................................TATCACAGCAATTTTGATGAGTT....................................................... 23 1 1 165.00 165 155 3 3 3 0 1 0
.................................................................................................TATCACAGCCATTTTGATGAGTA....................................................... 23 1 1 164.00 164 160 1 2 0 0 1 0
.................................................................................................TATCACAGCCCTTTTGATGAGTT....................................................... 23 1 1 163.00 163 11 105 26 19 2 0 0
.................................................................................................TATCACGGCCATTTTGATGAGTT....................................................... 23 1 1 158.00 158 117 12 18 7 3 1 0
.................................................................................................TATCACATCCATTTTGATGAGT........................................................ 22 1 1 158.00 158 151 1 1 2 3 0 0
.................................................................................................TATCACAGCCATTTTTATGAGTT....................................................... 23 1 1 151.00 151 67 8 11 65 0 0 0
.....................................................................................................ACAGCCATTTTGATGAGTT....................................................... 19 0 1 148.00 148 51 2 47 44 1 3 0
.................................................................................................TATCACAGCCATTTTGATTAGT........................................................ 22 1 1 146.00 146 110 1 11 19 4 1 0
.................................................................................................TATCACAGACATTTTGATGAGTT....................................................... 23 1 1 139.00 139 83 36 3 7 9 0 1
.................................................................................................TATCACAGCCATTTTGAAGAGTT....................................................... 23 1 3 127.67 383 115 5 3 4 194 5 57
.................................................................................................TTTCACAGCCATTTTGATGAGTT....................................................... 23 1 1 127.00 127 2 121 1 2 1 0 0
.................................................................................................TATCACAGCCATTTTGATGAGCT....................................................... 23 1 1 115.00 115 43 28 9 29 2 4 0
...................................................................................................TCACAGCCAGCTTGATGAGCT....................................................... 21 3 4 111.25 445 275 7 20 11 9 123 0
.................................................................................................TATCACAGCAATTTTGATGAGT........................................................ 22 1 1 101.00 101 100 0 0 1 0 0 0
..................................................................................................ATCACAGCCATTTTGATGAGT........................................................ 21 0 1 101.00 101 3 12 0 0 86 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTG....................................................... 23 1 1 95.00 95 78 13 0 2 2 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTTC...................................................... 24 1 1 93.00 93 34 41 6 5 5 2 0
.................................................................................................TATCACAGCCATTTTGCTGAGTT....................................................... 23 1 1 89.00 89 13 1 44 25 0 0 6
.................................................................................................TATAACAGCCATTTTGATGAGTT....................................................... 23 1 1 88.00 88 70 0 5 3 10 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTTA...................................................... 24 1 1 85.00 85 30 23 13 0 14 5 0
.................................................................................................CATCACAGCCATTTTGATGAGTT....................................................... 23 1 1 82.00 82 13 58 3 4 3 1 0
.................................................................................................TATTACAGCCATTTTGATGAGT........................................................ 22 1 1 82.00 82 13 65 1 0 3 0 0
.................................................................................................TGTCACAGCCATTTTGATGAGT........................................................ 22 1 1 79.00 79 3 70 0 2 3 1 0
.................................................................................................TACCACAGCCATTTTGATGAGT........................................................ 22 1 1 76.00 76 18 57 1 0 0 0 0
.................................................................................................TATCACAGCCATTTTGAGGAGTT....................................................... 23 1 3 74.00 222 13 12 4 5 9 3 176
.................................................................................................TATCACAGCCAGCTTGATGAG......................................................... 21 2 1 73.00 73 52 0 3 0 14 4 0
.................................................................................................TATCACAGCCATTTTGATGCGTT....................................................... 23 1 1 68.00 68 20 0 31 17 0 0 0
.................................................................................................GATCACAGCCATTTTGATGAGTT....................................................... 23 1 1 64.00 64 4 51 2 5 1 1 0
.................................................................................................TATCACAGCCATTTTTATGAGT........................................................ 22 1 1 63.00 63 54 1 2 5 1 0 0
.................................................................................................TATCACAGCCATTTTGATGTGTT....................................................... 23 1 1 60.00 60 3 36 8 13 0 0 0
.................................................................................................TATCACAGCCATTTTGATG........................................................... 19 0 1 54.00 54 42 5 0 0 6 0 1
.................................................................................................TATCACAGCCATTTTGGTGAGTT....................................................... 23 1 1 53.00 53 24 6 9 11 3 0 0
.................................................................................................TATCACGGCCATTTTGATGAGT........................................................ 22 1 1 53.00 53 42 1 6 1 3 0 0
.................................................................................................TATCACAGCCATTTTGATGA.......................................................... 20 0 1 52.00 52 29 3 5 0 15 0 0
.................................................................................................TATCACAGACATTTTGATGAGT........................................................ 22 1 1 50.00 50 41 2 2 1 4 0 0
.................................................................................................TATAACAGCCATTTTGATGAGT........................................................ 22 1 1 50.00 50 42 0 2 2 4 0 0
.....................................................................................................ACAGCCATTTTGATGAGT........................................................ 18 0 1 49.00 49 31 0 10 7 1 0 0
.................................................................................................AATCACAGCCATTTTGATGAGTT....................................................... 23 1 1 49.00 49 4 41 2 2 0 0 0
.................................................................................................TATCACACCCATTTTGATGAGTT....................................................... 23 1 1 48.00 48 21 15 1 5 6 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTTG...................................................... 24 1 1 46.00 46 34 1 4 0 7 0 0
.................................................................................................TATCACAGCCATTTTGATGATT........................................................ 22 1 1 46.00 46 13 4 13 4 12 0 0
...................................................................................................TCACAGCCATTTTGATGAGTT....................................................... 21 0 1 45.00 45 18 17 2 3 5 0 0
.................................................................................................TATCACAGCCATTTTGATGGGTT....................................................... 23 1 1 44.00 44 21 3 7 12 1 0 0
................................................................................................CTATCACAGCCATTTTGATGAGT........................................................ 23 1 1 43.00 43 15 20 1 0 7 0 0
.................................................................................................TATCGCAGCCATTTTGATGAGTT....................................................... 23 1 1 42.00 42 17 11 8 3 0 3 0
.................................................................................................TATCACAGCCATTTTGATAAGTT....................................................... 23 1 1 42.00 42 12 14 6 9 1 0 0
.................................................................................................TATCACAGCTATTTTGATGAGTT....................................................... 23 1 1 42.00 42 17 12 11 1 1 0 0
.................................................................................................TATCACAGCCAGCTTGATGAGCTT...................................................... 24 3 1 41.00 41 24 0 2 0 0 15 0
.................................................................................................TATCACAGCCACTTTGATGAGTT....................................................... 23 1 1 39.00 39 12 12 3 7 3 2 0
.................................................................................................TATCACAGCCATTTCGATGAGTT....................................................... 23 1 1 34.00 34 19 4 2 7 1 1 0
.................................................................................................TATCATAGCCATTTTGATGAGTT....................................................... 23 1 1 32.00 32 10 10 2 5 3 2 0
.................................................................................................TATCACAGCCCTTTTGATGAGT........................................................ 22 1 1 30.00 30 7 10 7 3 3 0 0
.................................................................................................TATCACAACCATTTTGATGAGTT....................................................... 23 1 1 29.00 29 13 3 5 6 2 0 0
.................................................................................................TATCACAGCCATTTTGATGAGA........................................................ 22 1 1 29.00 29 21 1 3 0 3 1 0
.................................................................................................TAGCACAGCCATTTTGATGAGTT....................................................... 23 1 1 28.00 28 11 4 10 1 1 1 0
.................................................................................................TATCACAGCCATTTTAATGAGTT....................................................... 23 1 1 28.00 28 10 8 4 4 2 0 0
.................................................................................................TATCACAGCCATTTTGAGGAGT........................................................ 22 1 3 27.00 81 59 8 1 5 3 3 2
.................................................................................................TATCACAGCCATTTTGATGAGGT....................................................... 23 1 1 27.00 27 6 6 0 13 1 1 0
.................................................................................................TATCTCAGCCATTTTGATGAGTT....................................................... 23 1 1 27.00 27 5 20 1 1 0 0 0
.................................................................................................TATCACAGCCAGCTTTATGAG......................................................... 21 3 1 27.00 27 14 0 0 0 12 1 0
................................................................................................CGATCACAGCCATTTTGATGAGTT....................................................... 24 2 1 27.00 27 0 27 0 0 0 0 0
.................................................................................................TATCACAGCCATTCTGATGAGTT....................................................... 23 1 1 26.00 26 11 5 4 4 1 1 0
.................................................................................................TGTCACAGCCATTTTGATGAGTC....................................................... 23 2 1 26.00 26 1 25 0 0 0 0 0
....................................................................................................CACAGCCATTTTGATGAGTT....................................................... 20 0 1 26.00 26 13 9 2 1 1 0 0
.................................................................................................TATCACAGCCAGCTTGATGAGC........................................................ 22 3 2 25.50 51 28 9 2 0 11 1 0
.................................................................................................TATCACAGCCATCTTGATGAGTT....................................................... 23 1 1 25.00 25 20 2 1 2 0 0 0
.................................................................................................TATCACAGCCATTTTGATTAG......................................................... 21 1 1 25.00 25 20 0 2 3 0 0 0
.................................................................................................TATCACAGCCGTTTTGATGAGTT....................................................... 23 1 1 24.00 24 10 4 5 4 1 0 0
.................................................................................................TATCAAAGCCATTTTGATGAGTT....................................................... 23 1 1 24.00 24 22 0 0 2 0 0 0
.................................................................................................TATCACAGTCATTTTGATGAGTT....................................................... 23 1 1 22.00 22 11 5 1 5 0 0 0
.................................................................................................TATCAGAGCCATTTTGATGAGTT....................................................... 23 1 1 22.00 22 1 16 3 1 1 0 0
.................................................................................................TTTCACAGCCATTTTGATGAGT........................................................ 22 1 1 22.00 22 1 19 2 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATCAGT........................................................ 22 1 1 22.00 22 20 0 1 1 0 0 0
.................................................................................................TATCCCAGCCATTTTGATGAGTT....................................................... 23 1 1 21.00 21 13 0 3 4 1 0 0
.................................................................................................TATCACAGCCACTTTGATGAGT........................................................ 22 1 1 21.00 21 13 1 2 3 2 0 0
.................................................................................................TACCACAGCCATTTTGATGAGTC....................................................... 23 2 1 20.00 20 0 20 0 0 0 0 0
.................................................................................................TATCAAAGCCATTTTGATGAGT........................................................ 22 1 1 20.00 20 18 0 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGCTGAGT........................................................ 22 1 1 20.00 20 9 1 5 4 1 0 0
.................................................................................................TATCACCGCCATTTTGATGAGTT....................................................... 23 1 1 19.00 19 7 0 1 1 10 0 0
.................................................................................................TAACACAGCCATTTTGATGAGTT....................................................... 23 1 1 19.00 19 12 5 1 0 1 0 0
.................................................................................................TATGACAGCCATTTTGATGAGTT....................................................... 23 1 1 19.00 19 15 4 0 0 0 0 0
.................................................................................................CATCACAGCCATTTTGATGAGT........................................................ 22 1 1 19.00 19 6 6 1 1 5 0 0
...................................................................................................TATCAGCCATTTTGATGAGTT....................................................... 21 2 1 19.00 19 19 0 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGTTGAGTT....................................................... 23 1 1 19.00 19 5 2 5 6 1 0 0
.................................................................................................TATAACAGCCATTTTGAAGAGTT....................................................... 23 2 3 18.67 56 0 0 0 0 55 0 1
.................................................................................................TATCACAGCCATTTTGAAGAG......................................................... 21 1 3 18.33 55 41 0 0 1 13 0 0
.................................................................................................TATCACAGCCATTTTGATAAGT........................................................ 22 1 1 18.00 18 9 2 3 3 1 0 0
.................................................................................................TATCACACCCATTTTGATGAGT........................................................ 22 1 1 18.00 18 10 0 1 2 5 0 0
.................................................................................................TAGCACAGCCATTTTGATGAGT........................................................ 22 1 1 18.00 18 7 0 6 4 1 0 0
.................................................................................................TATTACAGCCATTTTGATGAGTC....................................................... 23 2 1 18.00 18 0 18 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATCAGTT....................................................... 23 1 1 18.00 18 8 0 3 6 1 0 0
.................................................................................................TATCACAGCCATTTTGATGACTT....................................................... 23 1 1 17.00 17 7 0 2 8 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAATT....................................................... 23 1 1 17.00 17 8 2 2 4 1 0 0
.................................................................................................TATCACAGCCATTTTCATGAGTT....................................................... 23 1 1 17.00 17 6 3 3 5 0 0 0
.................................................................................................TGTTACAGCCATTTTGATGAGTT....................................................... 23 2 1 17.00 17 0 17 0 0 0 0 0
..................................................................................................AGCACAGCCATTTTGATGAGTT....................................................... 22 1 1 16.00 16 0 15 0 0 1 0 0
...................................................................................................TCACAGCCAGCTTGATGAG......................................................... 19 2 3 15.00 45 41 0 0 1 3 0 0
.................................................................................................TATCACAGTCATTTTGATGAGT........................................................ 22 1 1 14.00 14 10 2 1 0 1 0 0
...................................................................................................TCACAGCCAGCTTGATGAGCTT...................................................... 22 3 2 13.00 26 19 0 0 0 0 7 0
.................................................................................................TATCACCGCCATTTTGATGAGT........................................................ 22 1 1 13.00 13 5 0 0 3 5 0 0
.................................................................................................TATCACAGCCATTTTAATGAGT........................................................ 22 1 1 13.00 13 7 3 1 1 1 0 0
.................................................................................................TATCACAGCCATTTTTATTAGTT....................................................... 23 2 1 13.00 13 2 0 4 7 0 0 0
.................................................................................................TATCACAGCCAGCTTGATGA.......................................................... 20 2 1 13.00 13 6 0 0 1 6 0 0
.................................................................................................TATCACAGCAATTTTGATGAG......................................................... 21 1 1 13.00 13 13 0 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATGCGT........................................................ 22 1 1 13.00 13 7 0 6 0 0 0 0
.................................................................................................TATAACAGCCATTTTGAAGAGT........................................................ 22 2 3 12.33 37 6 0 1 1 29 0 0
.................................................................................................TATCACAGCCATTTCGATGAGT........................................................ 22 1 1 12.00 12 7 2 3 0 0 0 0
....................................................................................................CACAGCCATTTTGATGAGT........................................................ 19 0 1 12.00 12 10 0 0 1 1 0 0
.................................................................................................TATCATAGCCATTTTGATGAGT........................................................ 22 1 1 12.00 12 10 1 1 0 0 0 0
.................................................................................................TATCACAGCCGTTTTGATGAGT........................................................ 22 1 1 12.00 12 8 0 1 2 1 0 0
.................................................................................................TATCACAGCCATTTTGATGGGT........................................................ 22 1 1 12.00 12 8 0 1 3 0 0 0
.................................................................................................GATCACAGCCATTTTGATGAGT........................................................ 22 1 1 12.00 12 2 7 0 0 3 0 0
.................................................................................................TATCACAGCCATTCTGATGAGT........................................................ 22 1 1 11.00 11 8 1 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGGTGAGT........................................................ 22 1 1 11.00 11 8 1 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGTTGAGT........................................................ 22 1 1 11.00 11 5 1 4 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAGAT....................................................... 23 1 1 11.00 11 0 3 4 4 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTTAA..................................................... 25 2 1 11.00 11 7 0 4 0 0 0 0
.................................................................................................TATGACAGCCATTTTGATGAGT........................................................ 22 1 1 11.00 11 7 0 1 2 1 0 0
..................................................................................................ATCACAGCCATTTTGATGAG......................................................... 20 0 1 11.00 11 0 0 1 0 10 0 0
.................................................................................................TATCACAGCCACTTTGAGGAG......................................................... 21 2 3 10.67 32 21 0 0 0 8 3 0
.................................................................................................TATCACAGCCCTTTTGATGATTT....................................................... 23 2 1 10.00 10 0 7 1 0 2 0 0
.................................................................................................TATCACTGCCATTTTGATGAGTT....................................................... 23 1 1 10.00 10 4 1 3 1 1 0 0
.................................................................................................TATCACAGCCATCTTGATGAGT........................................................ 22 1 1 10.00 10 8 1 1 0 0 0 0
...............................................................................................TCTATCACAGCCATTTTGATGAGTT....................................................... 25 2 1 10.00 10 0 10 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATGTGT........................................................ 22 1 1 10.00 10 0 6 4 0 0 0 0
.................................................................................................TATCACAACCATTTTGATGAGT........................................................ 22 1 1 10.00 10 6 1 1 1 1 0 0
.................................................................................................TATCACAGCCATTTTGAT............................................................ 18 0 1 10.00 10 9 0 0 1 0 0 0
.................................................................................................TATCACATCCATTTTGATGAG......................................................... 21 1 1 10.00 10 9 0 0 1 0 0 0
.................................................................................................TAACACAGCCATTTTGATGAGT........................................................ 22 1 1 10.00 10 10 0 0 0 0 0 0
.................................................................................................TATCGCAGCCATTTTGATGAGT........................................................ 22 1 1 10.00 10 7 0 2 1 0 0 0
.................................................................................................TATCCCAGCCATTTTGATGAGT........................................................ 22 1 1 10.00 10 8 0 1 0 1 0 0
......................................................................................................CAGCCATTTTGATGAGTT....................................................... 18 0 1 10.00 10 6 0 1 3 0 0 0
.................................................................................................TATCACAGCCAGCTTGAGGA.......................................................... 20 3 6 9.50 57 46 0 0 0 9 2 0
.................................................................................................TCTCACAGCCATTTTGATGAGTT....................................................... 23 1 1 9.00 9 4 1 0 3 1 0 0
.................................................................................................TATCACAGCCATTTTGATTATTT....................................................... 23 2 1 9.00 9 0 0 2 7 0 0 0
.................................................................................................TACTACAGCCATTTTGATGAGTT....................................................... 23 2 1 9.00 9 0 9 0 0 0 0 0
.................................................................................................TATCACAGCTATTTTGATGAGT........................................................ 22 1 1 9.00 9 6 1 2 0 0 0 0
.................................................................................................TATCACTGCCATTTTGATGAGT........................................................ 22 1 1 8.00 8 7 0 0 1 0 0 0
.................................................................................................TATCACATCCATTTTGATGATTT....................................................... 23 2 1 8.00 8 2 0 0 6 0 0 0
...................................................................................................TATCAGCCATTTTGATGAGT........................................................ 20 2 1 8.00 8 7 0 0 0 0 1 0
.................................................................................................AATCACAGCCATTTTGATGAGT........................................................ 22 1 1 8.00 8 4 1 1 1 1 0 0
.................................................................................................TGTCACAGCCATTTTGATGAGTTT...................................................... 24 1 1 8.00 8 0 8 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGCTGCGTT....................................................... 23 2 1 8.00 8 0 0 5 3 0 0 0
.................................................................................................TATCACAGCCATTTTTATGATTT....................................................... 23 2 1 8.00 8 1 0 1 6 0 0 0
...................................................................................................TCACAGCCATTTTGATGAGT........................................................ 20 0 1 8.00 8 6 1 0 0 1 0 0
.................................................................................................TATCACAGCCATGTTGATGAGTT....................................................... 23 1 1 8.00 8 1 0 2 2 3 0 0
.................................................................................................TGTCACAGCCATTTTGATGAGC........................................................ 22 2 1 7.00 7 0 7 0 0 0 0 0
.................................................................................................TATTACAGCCATTTTGATGAGTTT...................................................... 24 1 1 7.00 7 0 7 0 0 0 0 0
.................................................................................................TATCACAGCCAATTTGATGAGTT....................................................... 23 1 1 7.00 7 3 1 0 1 2 0 0
................................................................................................GTATCACAGCCATTTTGATGAGTT....................................................... 24 1 1 6.00 6 0 1 0 0 5 0 0
.................................................................................................TATCACAGCCATTATGATGAGTT....................................................... 23 1 1 6.00 6 3 1 0 1 0 0 1
..................................................................................................ATCTCAGCCATTTTGATGAGTT....................................................... 22 1 1 6.00 6 0 6 0 0 0 0 0
.................................................................................................TATCACAGGCATTTTGATGAGTT....................................................... 23 1 1 6.00 6 2 1 0 3 0 0 0
.................................................................................................TATCACAGCCATTTTTATGAG......................................................... 21 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................................................TACCACAGCCATTTTGATGAGTTT...................................................... 24 1 1 6.00 6 1 5 0 0 0 0 0
.................................................................................................TATCACATCCATTTTGATGAGTC....................................................... 23 2 1 6.00 6 6 0 0 0 0 0 0
.................................................................................................TCTCACAGCCATTTTGATGAGT........................................................ 22 1 1 6.00 6 4 0 2 0 0 0 0
.................................................................................................TATCACATCCATTTTTATGAGTT....................................................... 23 2 1 6.00 6 0 0 1 5 0 0 0
...................................................................................................TCACAGCCACTTTGATGAGCT....................................................... 21 2 1 6.00 6 2 0 0 0 3 1 0
.................................................................................................TATCACAGCCATTTTGATTAGTC....................................................... 23 2 1 6.00 6 5 0 0 1 0 0 0
.................................................................................................TATCACAGCCATATTGATGAGTT....................................................... 23 1 1 6.00 6 2 0 0 2 2 0 0
.................................................................................................TATTACAGCCATTTTGATGAGC........................................................ 22 2 1 6.00 6 0 6 0 0 0 0 0
.................................................................................................TTTCACAGCCATTTTGATGAGTC....................................................... 23 2 1 6.00 6 0 6 0 0 0 0 0
.........................................................CTCCTCAAAGGGTTGTGAAATT................................................................................................ 22 1 1 6.00 6 2 0 0 4 0 0 0
.................................................................................................TATCACATCCATTTTGATTAGTT....................................................... 23 2 2 5.50 11 10 0 0 1 0 0 0
.................................................................................................TATCACAGCCGCTTTGATGAGCT....................................................... 23 3 1 5.00 5 4 0 0 0 1 0 0
.................................................................................................TATCGCAGCCATTTTGATGAG......................................................... 21 1 1 5.00 5 5 0 0 0 0 0 0
.................................................................................................TATCACAGCCACTTTGATGAG......................................................... 21 1 1 5.00 5 2 0 0 1 2 0 0
.................................................................................................TATCACAGCCATTTTGATGAAT........................................................ 22 1 1 5.00 5 2 0 1 1 1 0 0
.................................................................................................TATCACAGCCATTTTGATGAGCC....................................................... 23 2 1 5.00 5 1 4 0 0 0 0 0
..................................................................................................ATAACAGCCATTTTGATGAGTT....................................................... 22 1 1 5.00 5 0 4 0 0 1 0 0
.................................................................................................TAGCACAGCCATTTTGTTGAGTT....................................................... 23 2 1 5.00 5 0 0 5 0 0 0 0
.................................................................................................TATCACAGCCATTGTGATGAGT........................................................ 22 1 1 5.00 5 1 0 3 0 1 0 0
.........................................................CTCCTCAAAGGGTTGTGAAA.................................................................................................. 20 0 1 5.00 5 4 0 1 0 0 0 0
..................................................................................................TACACAGCCATTTTGATGAGTT....................................................... 22 2 1 5.00 5 4 1 0 0 0 0 0
.................................................................................................TGTCACAGCCATTTTGATGAG......................................................... 21 1 1 5.00 5 1 3 0 0 1 0 0
.................................................................................................TATCACAGCCTTTTTGATGAGTT....................................................... 23 1 1 5.00 5 3 0 2 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAGG........................................................ 22 1 1 5.00 5 2 0 1 1 0 1 0
.................................................................................................TATCACAGCCCTTTTGCTGAGTT....................................................... 23 2 1 5.00 5 0 0 3 2 0 0 0
.................................................................................................TATCACAGCCATTGTGATGAGTT....................................................... 23 1 1 5.00 5 1 2 1 0 1 0 0
.................................................................................................TATCACAGCCCTTTTGATGCGTT....................................................... 23 2 1 5.00 5 0 0 2 3 0 0 0
.................................................................................................TATCACAGCCATTTAGATGAGTT....................................................... 23 1 1 5.00 5 1 2 1 1 0 0 0
.................................................................................................TACCACAGCCATTTTGATGAGC........................................................ 22 2 1 5.00 5 0 4 1 0 0 0 0
.................................................................................................TATCACAGCCAGCTTGATG........................................................... 19 2 2 4.50 9 5 0 1 0 3 0 0
.................................................................................................TATCACAGCCAGCTTGAGGAGT........................................................ 22 3 3 4.33 13 7 0 0 0 1 5 0
.................................................................................................TATCACAGCCATTTTGAAGAGTTT...................................................... 24 1 3 4.33 13 4 0 0 0 7 2 0
.................................................................................................TATCACAGCCACTTTGATGAGC........................................................ 22 2 1 4.00 4 0 0 0 0 4 0 0
..................................................................................................ATCACAGCCATTTTGATGAGTTT...................................................... 23 0 1 4.00 4 2 1 0 0 1 0 0
................................................................................................CTATCACAGCCATTTTGATGAGC........................................................ 23 2 1 4.00 4 2 2 0 0 0 0 0
.................................................................................................TATCACCGCCATTTTGATTAGTT....................................................... 23 2 1 4.00 4 2 0 1 0 1 0 0
.................................................................................................TATAACAGACATTTTGATGAGTT....................................................... 23 2 1 4.00 4 1 0 1 0 2 0 0
.................................................................................................TATCACAGCCAGTTTGATGAGTT....................................................... 23 1 1 4.00 4 1 0 1 0 1 1 0
.................................................................................................TATCACAGCCATTTGGATGAGTT....................................................... 23 1 1 4.00 4 0 0 2 2 0 0 0
.................................................................................................TATCACGGCCATTTTGATTAGTT....................................................... 23 2 1 4.00 4 2 0 0 2 0 0 0
..................................................................................................TTCACAGCCATTTTGATGAGTT....................................................... 22 1 1 4.00 4 3 1 0 0 0 0 0
.................................................................................................TATCACAGCAATTTTGATGAGTC....................................................... 23 2 1 4.00 4 4 0 0 0 0 0 0
..........................................................TCCTCAAAGGGTTGTGAAATG................................................................................................ 21 0 1 4.00 4 2 0 0 1 1 0 0
.................................................................................................TATAACAGCCATGTTGAAGAGTT....................................................... 23 3 3 4.00 12 0 0 0 0 12 0 0
.................................................................................................TATCACAGCCATTTTGGTGTGTT....................................................... 23 2 1 4.00 4 0 0 3 1 0 0 0
.................................................................................................TATCACAGCCATTTTTATTAGT........................................................ 22 2 1 4.00 4 0 0 0 4 0 0 0
.................................................................................................TATCACAGCCACTTTGATGAGCT....................................................... 23 2 1 4.00 4 0 0 0 1 2 1 0
.................................................................................................TATCACAGCCATTTTGATGACT........................................................ 22 1 1 4.00 4 3 0 1 0 0 0 0
.................................................................................................TATCACAGCGATTTTGATGAGTT....................................................... 23 1 1 4.00 4 2 0 0 2 0 0 0
................................................................................................CGATCACAGCCATTTTGATGAGT........................................................ 23 2 1 4.00 4 0 4 0 0 0 0 0
.................................................................................................TATCACAGACCTTTTGATGAGTT....................................................... 23 2 1 4.00 4 0 3 0 1 0 0 0
.................................................................................................TATCACAGCCCTTTTGATGATT........................................................ 22 2 1 4.00 4 0 1 0 0 3 0 0
.................................................................................................TACCACAGCCATTTTGATGAG......................................................... 21 1 1 4.00 4 3 0 1 0 0 0 0
.................................................................................................TATCACAGACATTTTGATGAGTA....................................................... 23 2 1 4.00 4 3 0 0 0 1 0 0
.................................................................................................TATCACAGCCAGTTTGAGGAG......................................................... 21 2 3 4.00 12 12 0 0 0 0 0 0
..................................................................................................ATCACAGCCATTTTGATGAGTC....................................................... 22 1 1 4.00 4 0 4 0 0 0 0 0
.................................................................................................TATAACAGCCATTTTGATGAG......................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
.................................................................................................TGTTACAGCCATTTTGATGAGT........................................................ 22 2 1 4.00 4 0 4 0 0 0 0 0
.................................................................................................TATCACAGCCCTTTTTATGAGTT....................................................... 23 2 1 4.00 4 0 0 0 4 0 0 0
.................................................................................................TATCACAGCCCTTTTGATGAGC........................................................ 22 2 1 4.00 4 0 4 0 0 0 0 0
.........................................................CTCCTCAAATGGTTGTGAAATG................................................................................................ 22 1 1 4.00 4 3 0 0 0 1 0 0
.................................................................................................TATTACGGCCATTTTGATGAGTT....................................................... 23 2 1 4.00 4 0 4 0 0 0 0 0
................................................................................................CTATCACAGCCATTTTGATGAGTC....................................................... 24 2 1 4.00 4 0 4 0 0 0 0 0
.................................................................................................TTTTACAGCCATTTTGATGAGTT....................................................... 23 2 1 4.00 4 0 4 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAGCTA...................................................... 24 2 1 4.00 4 3 0 0 1 0 0 0
....................................................................................................CACAGCCATTTTGATGAG......................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0
.................................................................................................TATCACAGCCACTTTGAGGAGC........................................................ 22 3 3 3.67 11 6 1 0 0 3 1 0
.................................................................................................TATCACAGCCATTTTGCGGAGTT....................................................... 23 2 3 3.67 11 0 0 0 0 0 0 11
.................................................................................................TATCACAGACATTTTGAAGAGT........................................................ 22 2 3 3.67 11 8 0 0 0 3 0 0
.................................................................................................TATAACCGCCATTTTGAAGAGTT....................................................... 23 3 3 3.33 10 0 0 0 0 10 0 0
.................................................................................................TATCACAGCAGCTTTGATGAG......................................................... 21 3 4 3.25 13 11 0 0 0 1 1 0
.................................................................................................TATCACAGCCATTTTGATTACTT....................................................... 23 2 1 3.00 3 0 0 0 3 0 0 0
.................................................................................................TATTACAGCCATTTTGATGAG......................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................TATCACATCCATTTTGATGCGTT....................................................... 23 2 1 3.00 3 1 0 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAA......................................................... 21 1 1 3.00 3 2 1 0 0 0 0 0
.................................................................................................TATCACAGGCATTTTGATGAGT........................................................ 22 1 1 3.00 3 2 0 0 1 0 0 0
.................................................................................................TATCACCGCCATTTTGATGAG......................................................... 21 1 1 3.00 3 0 0 0 0 3 0 0
.................................................................................................TATCACAGCCCTTTTGATGAG......................................................... 21 1 1 3.00 3 0 1 1 0 1 0 0
.................................................................................................TATCACACCCATTTTGATTAGTT....................................................... 23 2 1 3.00 3 0 0 1 2 0 0 0
.................................................................................................TATCACAGCCATTTTGATTAGCT....................................................... 23 2 1 3.00 3 0 0 0 3 0 0 0
.................................................................................................TATCATAGCCATTTTGATGAG......................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................TATCACTGCCATTTTGATGTGTT....................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0
.................................................................................................TATCACACCCATTTTGATGACTT....................................................... 23 2 1 3.00 3 0 0 1 2 0 0 0
................................................................................................TTATCACAGCCATTTTGATGAGTT....................................................... 24 1 1 3.00 3 0 1 0 0 2 0 0
.................................................................................................TATCAAAGCCATTTTGATGAG......................................................... 21 1 1 3.00 3 2 0 1 0 0 0 0
................................................................................................ATATCACAGCCATTTTGATGAGTT....................................................... 24 0 1 3.00 3 0 1 0 1 1 0 0
.................................................................................................TATCACAGCCATTTCGATGAG......................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................TATCACACACATTTTGATGAGTT....................................................... 23 2 1 3.00 3 0 1 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAT......................................................... 21 1 1 3.00 3 2 0 0 1 0 0 0
.........................................................CTCCTCAAAGGGTTGTGAAAT................................................................................................. 21 0 1 3.00 3 1 0 1 1 0 0 0
.................................................................................................TATCACAGCAATTTTGATGAGTA....................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................TATTACAGCCATTTTGATGTGTT....................................................... 23 2 2 3.00 6 0 5 1 0 0 0 0
.....................................................................................................ACAGCCATTTTGATTAGTT....................................................... 19 1 1 3.00 3 1 0 0 2 0 0 0
.................................................................................................TATCACAGCCCTTTTGATGAGTTT...................................................... 24 1 1 3.00 3 0 1 1 0 1 0 0
.................................................................................................TATCACAGCCATTTTGATTAGTA....................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0
................................................................................................CTAACACAGCCATTTTGATGAGTT....................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.................................................................................................TATAACAGCCATTTGGATGAGTT....................................................... 23 2 1 3.00 3 1 0 2 0 0 0 0
.................................................................................................TTTCACAGCCATTTTGATTAGTT....................................................... 23 2 1 3.00 3 1 1 0 0 1 0 0
..............................................................................................ATCTATCACAGCCATTTTGATGAGTT....................................................... 26 3 1 3.00 3 0 3 0 0 0 0 0
.................................................................................................TATCAGAGCCATTTTGATGAGT........................................................ 22 1 1 3.00 3 0 3 0 0 0 0 0
.................................................................................................TATCACCGCCATTTTGAAGAGTT....................................................... 23 2 3 3.00 9 0 0 0 0 9 0 0
..................................................................................................TATACAGCCATTTTGATGAGTT....................................................... 22 3 1 3.00 3 2 0 1 0 0 0 0
.................................................................................................TATCACAGCCTTTTTGATGAGT........................................................ 22 1 1 3.00 3 1 1 1 0 0 0 0
.................................................................................................TATCACAGCCAGTTTGATGAGCT....................................................... 23 2 1 3.00 3 2 0 0 1 0 0 0
.................................................................................................TATCACAGCCATTTTCATGAGT........................................................ 22 1 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................TATAACAGCCATGTTGAAGAGT........................................................ 22 3 3 3.00 9 0 0 0 0 9 0 0
.................................................................................................TATCACAGCCATTTTGAAGAGTTA...................................................... 24 2 3 2.67 8 1 1 0 1 4 0 1
.........................................................TTCTTCAAAGTGTTGTGAAATG................................................................................................ 22 3 3 2.67 8 1 0 0 0 7 0 0
.................................................................................................TATCACAGCCATGTTGAAGAGTT....................................................... 23 2 3 2.67 8 0 0 0 0 8 0 0
...................................................................................................TCACAGCCGCTTTGATGAGCT....................................................... 21 3 3 2.67 8 8 0 0 0 0 0 0
.................................................................................................TATAACAGACATTTTGAAGAGTT....................................................... 23 3 3 2.67 8 0 0 0 0 8 0 0
.................................................................................................TATCACAGCCGCTTTGAGGAG......................................................... 21 3 6 2.17 13 11 0 0 0 1 1 0
.................................................................................................TATCACAGCCATTTTGCTGAGCT....................................................... 23 2 1 2.00 2 0 0 1 1 0 0 0
.....................................................................................................AAAGCCATTTTGATGAGTT....................................................... 19 1 1 2.00 2 1 0 0 1 0 0 0
.................................................................................................TATCACAGACATTTTGATGAG......................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................ACAGCCATTTTGTTGAGTT....................................................... 19 1 1 2.00 2 0 0 2 0 0 0 0
.........................................................CTCATCAAAGGGTTGTGAAATG................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................ACAGCCATTTTCATGAGTT....................................................... 19 1 1 2.00 2 0 0 1 1 0 0 0
.................................................................................................TGTCACAGCCATTTTGATGAGCT....................................................... 23 2 1 2.00 2 0 2 0 0 0 0 0
.................................................................................................TATCACAGCTATTTTGATGAGTC....................................................... 23 2 1 2.00 2 0 2 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTTATGAGCT....................................................... 23 2 1 2.00 2 0 0 0 2 0 0 0
.................................................................................................TATCACGGCCATTTTGATGAGTC....................................................... 23 2 1 2.00 2 1 1 0 0 0 0 0
.................................................................................................TATCACAGCCATTTTGATGCTTT....................................................... 23 2 1 2.00 2 0 0 0 2 0 0 0
.................................................................................................TATCACAGCTATTTTGATGAG......................................................... 21 1 1 2.00 2 1 0 0 0 1 0 0
.................................................................................................TATCACAGCCATTTTTATGAGTC....................................................... 23 2 1 2.00 2 0 0 0 2 0 0 0
.................................................................................................TATCACAGCCATTTTGAGT........................................................... 19 2 7 2.00 14 11 0 0 0 1 2 0
.................................................................................................TGCCACAGCCATTTTGATGAGTT....................................................... 23 2 2 2.00 4 0 4 0 0 0 0 0
.....................................................................................................AAAGCCATTTTGATGAGT........................................................ 18 1 1 2.00 2 2 0 0 0 0 0 0
................................................................................................CTATCACAGCCATTTTGATGAG......................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0

Anti-sense strand reads

TTGCTAACCTACGATTCGGTTGTTCACAAGCACTAGGTTCTGTGTTAAGAATGCATTGAGGAGTTTCCCAACACTTTACAGCTGATAATAGATGAGTATAGTGTCGGTAAAACTACTCAAAGCACGCTTAAATTTTTCGCCCAATTCTTTTGTATAAAGTTTTCGCTAACTTGTT

****************************************..(((((.((((.(((((.((((((((((((((.(((................))).)))))))).)))))).))))).)))).)))))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 V108

head

 V107

male body		 M057

embryo
.........................................................GAGGAGTTTCCCGACACTAT.................................................................................................. 20 2 1 39.00 39 19 18 2 0
......................................................ATCGAGTAGTTTCCCGACACT.................................................................................................... 21 3 2 4.00 8 2 5 1 0
........................................................CGAGGAGTTTCCCGACACTAT.................................................................................................. 21 3 2 3.50 7 2 2 2 1
........................................................AGAGGAGTTTCCCGACACTAT.................................................................................................. 21 3 1 2.00 2 2 0 0 0
..........................................................AGGAGTTTCCCGACACTAT.................................................................................................. 19 2 1 2.00 2 2 0 0 0
.......................................................TTGAGCAGTTTACCAACACTAT.................................................................................................. 22 3 1 1.00 1 0 0 0 1
.......................................................TCGAGTAGTTTCCCGACACT.................................................................................................... 20 3 9 0.89 8 0 7 1 0
........................................................GGAGGAGTTTCCCGACACTAT.................................................................................................. 21 3 2 0.50 1 1 0 0 0
.......................................................TTGAGCAGTTTACCGACACTTT.................................................................................................. 22 3 4 0.50 2 2 0 0 0
........................................................TGAGCAGTTTACCAACACTAT.................................................................................................. 21 3 4 0.50 2 0 2 0 0
.........................................................GAGTAGTTTCCCGACACT.................................................................................................... 18 2 6 0.17 1 0 1 0 0
.........................................................GAGGAGTTTCACGACACTAT.................................................................................................. 20 3 10 0.10 1 1 0 0 0
.........................................................GAGGAGTTTACCGACACTAT.................................................................................................. 20 3 13 0.08 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4770:10769354-10769528 - der-mir-13a Known_mirbase AAC---GATTGG--------ATGCTAAGCCAACAAGTGTTCGTGATC-----------CAAGA-------CA---------------------------------------------C-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TAAAAAGCG-G--------------------------------------------------GTT-------AA-GAAAACATATTTCAAAAGCGATTGAA---------------------CAA
droYak3 3R:15188542-15188723 + dya-mir-13a Known_mirbase AAC---GATTGG--------ATGCTAAGCCAACAAGTGTTCGTGATC-----------CAAGC-------CA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-TCGGCAACT-T--ATTTCATG----------TATT---------------------------T------------CAAACATATTTCATAATCGATTGAC---------------------CCA
droSec2 scaffold_0:10705018-10705191 + dse-mir-13a Known_mirbase AAC---GATTGG--------ATGCTAAGCCAACAAGTGTTCGTGATC-----------CAAGC-------CA---------------------------------------------T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-TGGTCAGCG-G--------------------------------------------------ATC-------GA--AAAACATATTTCATAACCGACTGAA---------------------CCG
droSim2 3r:9985569-9985744 + dsi-mir-13a Known_mirbase AAC---GATTGG------ATATGCTAAACCAACAAGTGTTCGTGATC-----------CAAGC-------CA---------------------------------------------T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-TCGGCAGCG-G--------------------------------------------------ATC-------GA--AAAACATATTTCATAACCGACTGAA---------------------CCG
dm3 chr3R:11243211-11243388 - dme-mir-13a Known_mirbase AAC---GATTGG--------ATGCTAAACCAACAAGTGTTTGTGATC-----------CAAGC-------CA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-GCGGCAGCG-G--------------------------------------------------ATC-------AA--AAAACATATTTCATAACCGACTGAC-----------------TGAACCA
droEug1 scf7180000409281:109499-109674 + AAC---GATTGA--------GAGCTAAGCCAACAAGTGTTCGTGATC-----------CGATA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAG--TT-TCGGCATCT-G--------------------------------------------------GTC-------AAAGTTATTATATTTCATAACCGATTTAT---------------------TCG
droBia1 scf7180000302136:835508-835681 - AAC---GGGGGC--------GAGCTAAACCAACAAGTGTTCGTGATC-----------CAACA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCCACT--G-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCC-G--------------------------------------------------GTC-------AA--AAATCGCATTTCGCAACCGTTCGAC---------------------TCG
droTak1 scf7180000415769:1925938-1926113 + AAC---GGTGGA--------GAGCTAAACCAACAAGTGTTCGTGATC-----------CAACA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTATT--A-TCCACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCT-G--------------------------------------------------GGC-------ACTAAAATCATATTTCGTGACCGTTCGTA---------------------TCG
droEle1 scf7180000491080:1007082-1007251 - AA------------------AAGCTCAACCAACAAGTGTTCGTGATC-----------CGACA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTCCC-ACT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCAGCAACT-G--------------------------------------------------GATAG---ACAT--AAATCAGTTTTTATAAGCGCTTGCT---------------------TCG
droRho1 scf7180000779250:92630-92802 + AA------------------AAGCTAAGCCAACAAGTGTTCGTGATA-----------TATATGT-CGGATA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCT-G--------------------------------------------------GGC-------TA--AAATCAAGTTTCATAAGCGATTGCA---------------------TCC
droFic1 scf7180000452523:592225-592403 - AAG---G---CGAAAGCCAAAAGCTAAACCAACAAGTGTTCGTGATC-----------CCATA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTGTT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCT-G--------------------------------------------------GGC-------AA--ATATCAATTTCCATAACCGATTGTA---------------------TCC
droKik1 scf7180000302639:1443179-1443338 + GA----------------------TAAGCCAACAAGTGTTTGTGATC-----------CAAGA-------TG-------------------------------------------TCT-GATTCTTACGTAACTCTTCAAAG-GGCTGTGAAATGTTACC-GTT--A-TCTATCCATATCACAGCCATTTTGATGAGTTCCGTGTGAA--TT-TCGGCAGCC-A--------------------------------------------------GAAGG---A-----GTAC--CGCTTCGCAA---ATCAAA---------------------TCG
droAna3 scaffold_13340:12827566-12827762 - dan-mir-13a Known_mirbase AA-------------------TGCTACGCCAACAAGTGTGCTACA--AGAATCCCCTCAA-----------------------------------------AAAAGGACGATCCATCG-AGTTCTTACGTAACTCCTCAAAG-GGCTGTGAAATGTTGCC-ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGGGAA--TC-G--TCAGAA-AAC-CGTCA------------GAAAG---GGGCGCGGCGGC-------A-----G----------------GATGTCATAACCGATTGTG---------------------TT-
droBip1 scf7180000396691:1710464-1710651 - AA-------------------AGCTGCGCCAACAAGTGTTCTCGA-----AGCCCCCCTA------------------------------------------ACCCGAAGATCCATCC-AGTTCTTACGTAACTCTTCAAGG-GGCTGTGAAATGTTGC--ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-CCA--AA-AAATCGCATCGTG----------GGGCG---CGGCAGGC----------------------------------GATTTCGTAACCGATTGTT---------------------C--
dp5 2:9824880-9825077 + dps-mir-13a Known_mirbase ----------------------------CCAACAAGTGTTCGGCTCG-----------TACTTTT-TGGAC-------------------------AAAAAAAAAAAACCGTCAGCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG--CCAGCA-ATC-CATCATC----------GATCG---GGGCAGGG---C-------AGGA-TGG---A-----G-------------CACAGAGTGGA-----------------CGGAAAG
droPer2 scaffold_0:10660018-10660193 - dpe-mir-13a Known_mirbase ACT---ATTTGG--------A-------CAAAAAAAAAACCGTCATC-----------C----------------------------------------------------------C-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG--CCAGCA-ATC-CATCATC----------GATCG---GGGCAGGG---C-------AGGA-TGG---A-----G-------------CACAGAGTGGA-----------------CGGAAAG
droWil2 scf2_1100000004902:2143161-2143348 - dwi-mir-13a Known_mirbase A--------------------------GCCAACAAGTGTTTTTTT--GGAATCCGTTCCGGCA-------AA------------------------------------AGATG----GAATTTCTTACGTAACTCTTCAAGGGGGTTGTGAAATGTTGCC-ATTTTATTCAACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAGTATT-CCTGCAACA-G-----------------------------------------------------------------------TATTCGAAATGGATGGTATCCTTAGAATATGTGAATTGACTG
droVir3 scaffold_13047:13335597-13335779 + dvi-mir-13a Known_mirbase AACGTCGCTTCG--------ATAC-----------GT-----------------------------------------------------------------AAAGACCAACCCACTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTTGCC-GTT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-GCT--TA-A-ATT-CATTGCCCTCGTCGGCAGAATGGGCTGGCA--------------A--GGAC------GA--TTATCGTTT-----------TTGCA---------------------TTG
droMoj3 scaffold_6540:10568280-10568510 + dmo-mir-13a Known_mirbase TAC---AAC-----------AAACACAACCAACAAGTGTTTGCATCT-----------CATTATATGGGAC-------------------------ACTTAACGATCTCCGCCCATTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTAGCC-ATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGTGAA--TTGCTTTCAGCA-T------TGTCC----------CATC---CGTTTTGT----GTCACTG---GATTATCCACCTCAATCTCCATCTTCATTTGCATTCGAA---------------------TTG
droGri2 scaffold_14906:4357681-4357848 - dgr-mir-13a Known_mirbase TAC---A---------------ACAAAGCCAACAAGTGTTTGTATCT-----------CATTA-------TTTTATTCTTGCATACATCTGCAGACTGTGAGCGAACCAAGCCCACCC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTGGG-TATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-----------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
AAC---GATTGG--------ATGCTAAGCCAACAAGTGTTCGTGATC-----------CAAGA-------CA---------------------------------------------C-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TAAAAAGCG-G--------------------------------------------------GTT-------AA-GAAAACATATTTCAAAAGCGATTGAA---------------------CAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23143373.0043373224714749423340366811738839
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................22114339.001433913171875135055514290991
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................2111143.00114312846721988700
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................231778.0077855728201910
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................241394.0039426177479131220
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................221273.0027316492410120
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................221235.002350210600190
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................221189.0018915976912770
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................231164.00164012011600
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191148.001481247443510
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................211101.00101861200030
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................23195.0095213020780
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................24193.0093541652340
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................24185.008514231305300
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19154.005465000421
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20152.0052153500290
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18149.0049101070310
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................24146.004671400340
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21145.0045517230180
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22129.002931301210
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20126.002619210130
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................19112.001210010100
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................25111.00110040070
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................20111.001110010000
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................18110.00100001090
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................18110.00100013060
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2018.0081100060
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATT......................................................................................................................................................................................2216.0060004020
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC..........................................................................................................................................2315.0050400010
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAA........................................................................................................................................................................................2015.0050010040
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................2215.0050011120
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2314.0041100020
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................2114.0041001020
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC..........................................................................................................................................2214.0040400000
...................................................................................................................................................................................CACAGCCATTTTGATGAG............................................................................................................................................1814.0040000040
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................2113.0030100020
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2413.0031101000
................................................................................................................................................................................TATCACAGCCATTTTGATGAT............................................................................................................................................2113.0030001020
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................2113.0030011010
................................................................................................................................................................................TATCACAGCCATTTTGAGT..............................................................................................................................................1972.001410002110
droYak3
AAC---GATTGG--------ATGCTAAGCCAACAAGTGTTCGTGATC-----------CAAGC-------CA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-TCGGCAACT-T--ATTTCATG----------TATT---------------------------T------------CAAACATATTTCATAATCGATTGAC---------------------CCASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23135057.0035057441354185946623219959093340000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................2214356.0043563943711765416081477771000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................2311380.001380011361351000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................2211187.001187069602114420000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................241331.003310151303537104100000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................221274.00274011915311000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................211256.0025670343018307040000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................221215.002152020331600000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191157.0015720358325930000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................21141.0041203621000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18141.004110011101900000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21137.0037032500000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................24135.00350015631010000
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20132.0032012820100000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................24131.0031001651810000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21130.0030041461500000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................23127.0027002212200000
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19126.0026146301200000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAA........................................................................................................................................................................................20116.0016011100400000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23113.0013001010200000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC..........................................................................................................................................22113.0013001300000000
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20110.001044101000000
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................1819.00900620100000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC..........................................................................................................................................2318.00800800000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................2418.00801302200000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................2218.00830011300000
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................2117.00702220100000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2017.00702203000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGT.....................................................................................................................................................................................2316.00600600000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................2116.00640200000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................2214.00400110200000
...................................................................................................................................................................................CACAGCCATTTTGATGAGTC..........................................................................................................................................2014.00400400000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................2114.00420001100000
...........................................................................................................................................................TCGCCTATT--A-TCTACTCA.................................................................................................................................................................1813.00310200000000
.......................................................................................................................................................................................................TCGTGCGAA--TC-TCGGCAACT-..................................................................................................................2013.00330000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2313.00302100000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT........................................................................................................................................2513.00301100100000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAA.........................................................................................................................................................................................1912.00200100100000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGA.....................................................................................................................................................................................2312.00200200000000
droSec2
AAC---GATTGG--------ATGCTAAGCCAACAAGTGTTCGTGATC-----------CAAGC-------CA---------------------------------------------T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-TGGTCAGCG-G--------------------------------------------------ATC-------GA--AAAACATATTTCATAACCGACTGAA---------------------CCGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23146028.00460286065463350711369
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................2216525.00652543510414434543
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................211597.00597571448478
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................221491.0049117637791
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191290.002900022367
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................241165.00165488172
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................22168.006858082
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21158.005830523
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................24152.0052313612
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19152.005270045
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18151.005100942
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................23137.003711278
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23135.0035101123
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................24132.0032011813
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20131.003140027
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................21127.002710818
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21127.002726001
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................22113.00130058
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22112.001210110
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................25111.00112153
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................18110.001000100
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................2016.0066000
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................2015.0050050
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................2214.0040022
....................................................................................................................................CTCCTCAAAG-GGTTGTGTT.........................................................................................................................................................................................1914.0042002
....................................................................................................................................CTCCTCAAAG-GGTTGTGAA.........................................................................................................................................................................................1914.0040040
........................................................................................................................................TCAAAG-GGTTGTGAAATG......................................................................................................................................................................................1814.0041003
....................................................................................................................................CTCCTCAAAG-GGTTGTGA..........................................................................................................................................................................................1814.0040013
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAA........................................................................................................................................................................................2013.0031011
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2013.0030012
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................2113.0030030
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................1813.0030012
................................................................................................................................................................................TATCACAGCCATTTTGAGT..............................................................................................................................................1952.20111046
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2412.0020020
................................................................................................................................................................................TATCACAGCCATTTTGATGAT............................................................................................................................................2112.0021001
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA.......................................................................................................................................2612.0020020
................................................................................................................................................................................TATCACAGCCATTTTGATGT.............................................................................................................................................2012.0020002
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................2412.0020011
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAA........................................................................................................................................................................................1912.0021001
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATA......................................................................................................................................................................................2211.0010010
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................2111.0011000
....................................................................................................................................................................................ACAGCCATTTTGATGAGC...........................................................................................................................................1811.0010001
................................................................................................................................................................................TATCACAGCCATTTTGATA..............................................................................................................................................1921.0020002
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................2011.0010001
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC..........................................................................................................................................2211.0010001
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGG...........................................................................................................................................2111.0011000
................................................................................................................................................................................TATCACAGCCATTTTGATGAAA...........................................................................................................................................2211.0011000
................................................................................................................................................................................TATCACAGCCATTTTGATT..............................................................................................................................................1911.0011000
droSim2
AAC---GATTGG------ATATGCTAAACCAACAAGTGTTCGTGATC-----------CAAGC-------CA---------------------------------------------T-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-TCGGCAGCG-G--------------------------------------------------ATC-------GA--AAAACATATTTCATAACCGACTGAA---------------------CCGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................2316948.006948160210460112832914118621119338485400001
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................2211889.00188919962514339734131314131767300000
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................2111309.001309291492162872000164300000
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................181646.0064610006957500000000001
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................191288.002881073001316400000100000
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................201240.00240260032818000111000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................221169.00169100156238000109700000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................24176.007600010061029224400000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................25158.00580011000729162200000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................19147.0047602011000043300000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA.......................................................................................................................................26140.0040000000422292100000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................22137.0037200281200020200000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................24126.00260001100000201300000
................................................................................................................................................................................TATCACAGCCATTTTGA................................................................................................................................................17426.0010400000012165962000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18124.0024700002000141000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21121.0021200140400000100000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTCG.......................................................................................................................................26119.0019000001900000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................22118.0018130000000000500000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................22118.0018100200000006000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................21116.001641110700020000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................21114.0014140000000000000000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21111.001100020001100700000
................................................................................................................................................................................TATCACAGCCATTTTG.................................................................................................................................................1649.2537000000100036000000
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................2118.00800020300000300000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAA.........................................................................................................................................................................................1918.00800000800000000000
.......................................................................................................................................................................................GCCATTTTGATGAGTT..........................................................................................................................................1618.00800000000017000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGA..........................................................................................................................................................................................1817.00700000700000000000
...........................................................................................................................................................TCGACTATT--A-TCTACTCA.................................................................................................................................................................1817.00700500200000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................2315.00510000000000400000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAA........................................................................................................................................................................................2015.00500000500000000000
................................................................................................................................................................................TATCACAGCCATTTT..................................................................................................................................................1554.2021000000001119000000
.................................................................................................................................................................................ATCACAGCCATTTTGATG..............................................................................................................................................1814.00400000400000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCAA.........................................................................................................................................2414.00400000000004000000
................................................................................................................................................................................TATCACAGCCATTTTGATGG.............................................................................................................................................2014.00440000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................2414.00400020000010100000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGT.....................................................................................................................................................................................2313.00300001000010100000
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................2013.00310000100010000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................2213.00320000000100000000
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................1813.00300000000100200000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................2013.00300000300000000000
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................1913.00310001000000100000
.....................................................................................................................................TCCTCAAAG-GGTTGTGAA.........................................................................................................................................................................................1813.00300000300000000000
.......................................................................................................................................................................................................TCGTGCGAA--TC-TCGGCAG.....................................................................................................................1813.00300300000000000000
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2412.00200000100000100000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTA.........................................................................................................................................2012.00200000000101000000
...............................................................................................................................................................................ATATCACAGCCATTTTGA................................................................................................................................................1832.00600000600000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTTCG.......................................................................................................................................2512.00200000200000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCA..........................................................................................................................................2312.00200000000002000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2312.00200020000000000000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2012.00200000000000200000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTAA........................................................................................................................................2112.00200000000002000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATGTCG...................................................................................................................................................................................2512.00200001100000000000
.......................................................................................................................................................................................................TCGTGCGAA--TC-TCGGCAGCG-..................................................................................................................2012.00220000000000000000
..........................................................CAAGC-------CA---------------------------------------------T-AGTTCTTACGTAA.............................................................................................................................................................................................................2111.00100000000000100000
................................................................................................................................................................................TATCACAGCCATTTTGATGT.............................................................................................................................................2011.00100000000001000000
dm3
AAC---GATTGG--------ATGCTAAACCAACAAGTGTTTGTGATC-----------CAAGC-------CA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TC-GCGGCAGCG-G--------------------------------------------------ATC-------AA--AAAACATATTTCATAACCGACTGAC-----------------TGAACCASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................231165783.0016578300009944201181091664182401010603611605451917619748245746586311255633819740106192233306299727042181904227600000000000000000566728392216971422587164946183235822274463439755126159146205542879371792267136290424484076114561020767771101910881474048225943814701652392123400001000207332938646478823444743326123282716000005031221715493945439603303492116876362211509418925137735014260824210483919351634000164193600000462400000270402138478691679371461577639292287400970000308937882354167299532349272329803850466832023252440100264587409060473985712313960432391311053946608148821441791103391329712848396867632585305395138851089541105673243661171317191108277191428796147169253542177741607631344543652803132852271016516757514304837
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................22149902.0049902000089301122131350109301350137130334545501920193817111420812773252256662331272016503801597000000000000000002216151635532613015367201214474318815072717948621522354431167145310923291774568715712217303241742931245908354206523020002100020241932201211312106189106800000239225124932105608591385682332542144499651412226711033701907811660007110120000014130011042714962282581112212518103511400131100177237020311115616131914472974164312948151616706208192572715209013385419158260300105157215278310180432522114411871272159821119135715066133079872532234232271901214912227482613210744524351992055231165468416641384689226268850
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................2117096.007096000038200010100150021000090000212289299105400101001001002212105059400000000000000000274211840021012136717201224351727106820091843123301073890188036197923868444000000000020200000000000000000000060127165066207834912314214011621206110256101000000030000000000000000500021340309100000007801263713011377334925400113010112004023310862991181101422100100205391360103220114116728210711100140106251421737411740
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................2214149.004149000000144200000000000000000366710516223050000000000200100000000000000000000000000001001761867501502207203400203141300001720417720013703034915211400000000005113878200000001000000000000076180305642828113177261192421340000019000200000000000000000000000140000000000100000000144122033100031304120008002012002000100010000000005270102949210974241285200001321021000202300120110004106226151106300
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2412296.00229600002100100100000010100000403000000011000120100021100000118100000000000000000201446319180010015056040110014100343202331001220404290251473800000000001041810021150102000000210900617205200341465112378096300870971013000306100000200000001322732101320203200110003746128210013180425111511130121130132012229142315221818224110625975763514620135035241591590144556411232817501452122006191320
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................2012048.00204800000000000000100400000100021110788643280000000000000000000004110000000000000000001006000000000114007006720640000000010001337650460181633738217839001400000100000000000000000000000000114162066223297109112168116029000101180000000000000000000000000000000001000022000000000003001004202000001100000000000000035000813000009974701000000201000000004000000000006600000011000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................2411450.001450000000000000000000000420002000000000111110300526533410000000000000000000000000014310610000071250101054112111000130116402022911742114000000000021071123620001500000000111170640440017431480360693000003916180001048000009500000021161202123210190000320035014000055000401140010010110020025670305750716739411211112151810174202152210100241029914010100030000510131000400
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................1911363.00136300000000000000100000000000200242411102220001000004230100000000000000000000000010030000000000000001121000000000000000005506043291200100000000001116391520332320101000002061003848022004542460901100000016230100000000000000000000010721130321104000000005998031700011616051200030020210316001010363034124910361470006324541561573111021510013030101011000000001410100101000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................221656.006560000401232000000000000000000000000000000002010001100000000000000000000000000000032000000020015001010000100010020100001860403618031960000000000000000000000000000000110001221010004292191310312000003100000000000000000000000000000000000000000000000000031000324100000011000000000120101937114306218560000135940100027330011100000000000000000500000001100
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................181535.0053500000000000000000000010000002212425300000000000000000000000000000000000000000011000000000000000010001004000000000100500210000002302100210000000000000000000000000000000006046052124247943120000022000000000000000000000000000000000000000000000001000100000000000000000000001000000000000110000025010000000000000000000000000000000000000000001
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................191479.004790000000000000020060000000001971317021000000000000000000000110000000000000000000000000900000024009010102800000000001000110100020612200320000000000000000000000000000000082002111187151041721010006000000000000000000000000000000000000000000000000101500003801110000900000000000000001000000000007573100100200000000000000000000000008110000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................251450.004500000000000000000000000000000000000221100030300023001000000000000000000000000000009000400000100400000012000100002100202000000001022000000000001512033130100000000000000111206002407160700000031300000000100000190000000000000310032013000100000100000001100000101000000000000000263810272826258101000225112200456440100005215100000000000004110000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................231431.00431000000000420001000000000000000000000000000000000000000000000000000000000000000001102500030000010000111800000000100010200202140202000000000000001000010000100000000000017707007717060132000002800000000000000000000000000000000000000000010000340230000250200000200010000001000032201032141801201915143565911005111001101000010000000000110010101100
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................221345.0034500000000000000200000001000100000000000000110000010010000000000000000000000000000200300000004002000000130000000000000024010217030200000000000000000110000000000000000001112010003803060300000030000000010000000000000000200000010001100000000001101840013801110012110010102054100511110376821309101013130310023430411101100101000000000100100201400
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................231337.0033700002000111020000000000000000000000000100000000020000000000000000000000000000110000000001000000001000200100000101010010000100202100000000000000000000000200000010000036050001304045045400000101000000000000000000000000001000000000000000000002000000013000000000001000000000101368316141452021413181931100022320130300000000000000000100000002000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................221302.003020000100000010000000000000000000000000000000000003010000000000000000000000000000000001000000101001000150102000000000000000001000210000000000000000120100000000000010004504000903035133100000160000000000000000000000000000000000000000000000000011000046040110110011010000010001044327592010118172641100020102113300000000000000000000000001100
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................181301.0030100000000000000000000000000100000000020000000011100010000000000000000000000000000000000000000000000000000000000000000210300280102000000000001220000000000000000000011091309000200130003000000411000000000000000000000020010000001000000000000030115100115283510010800010100513201062921009231000895190400000010000100000100000000000200000000001
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................231231.002310000400243030000000000100000000000000000000000000010000000000000000000000000000000000000410000000000030000000010000031030323010410000000000000100000000000000000000001016030071117190130000001700000000010000000000000000000000000000010001000100010000480101000000000000000000003000242001007101051001013000200000312100100000000500000003000
.....................................................................................................................................TCCTCAAAG-GGTTGTGAAATG......................................................................................................................................................................................211217.0021700001000000000000000000000030140030000000000000000000000000000000000000000000000200020000002022010001200000000001001010101120000000000000000120000000000000000000000007043310140578150000070000000000000000000000000000000000000000000000023001000030000000040000010000000000000000001000813718133030000003038000001000000000011700200000000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................211192.00192000000000000000000000000000010000000000000000000000000000000000000000000000000001202112100001102200222745000020004350100002010613013000000000000000000000000000000000010220200230410000000004000000000000000000000000000000000000000000000003600100001400000000000000000000000331000000000011150500000000000000000000100000000100000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA.......................................................................................................................................261192.0019200000000000000000000010000000000000103000000010010000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000150000201000200000000000001000001000000000000001010000003000001400000000000001020010700000000000000000000000000000000000000000018239152228910000000012000014201000000218000000000000000010000000
....................................................................................................................................CTCCTCAAAG-GGTTGTGAAAT.......................................................................................................................................................................................211163.0016300000000020000000000000000000134001000000000000000000000100000000000000000001120155532000001017000022500000000131000000000000011000000000000040000000000000000000000061602204413072650000020000000000000000000000000000000000000000000000012000000000000000000000100000000000000000000000121317510000000000000000000000000010100100000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................221142.001420000100000010000010000000000000000000000000000000000100001000000000000000000012010036000000000100100080000000012000000000000000000000000000000000000000000000000000006100100504000200000010010000000000000000000000000000000000000000000022001000020000100000000000000001001272907190000012232300002101111002000000000000000000000003000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................241138.001380000000000010000000000000010000000000000001000000000000000000000000000000000000001010000000000100000050001000000100000010005010430000000000101000000000000000000000001301001603020200001040000000000000000000000000003000000001000000420013001000037100000040000002010000100203010100100343155110000000011100001200000000000500000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTATC.......................................................................................................................................26198.009800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGA................................................................................................................................................17493.7537500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050300000000000000010000000000000000000000000000010000000000000000000000000000000000000000000010110274004538000071161715300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................21179.00790000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000010000000000000001000000001005000000000000000000000000000000000000770400280105050000005000000000000000000000000000000000000000000000000000000001301000000000000000000000020000000000020310000020000000000000000000000000100000000000
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20177.0077000000000000000000000000000000470100000010000000000000000000000000000000000000000000000000000000026200000000000110000000000000021000000000000000000000000000000000000240100090401000000001000000000000000000000000000000000000000000000002100000000000000001000000000000000230202010100003061110000000000000000000000000000000000000000
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................18175.0075000000000000000000000000000010420000000000000000000000000000000000000000000001000000000000000000000000000000000000000001000000200000000000001000000100000000000000000350400120410020000000000000000000000000000000000000000000000000000003300000000000000000000000000000000451202010010010144700000000000100000000000000000000000000000
droEug1
AAC---GATTGA--------GAGCTAAGCCAACAAGTGTTCGTGATC-----------CGATA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAG--TT-TCGGCATCT-G--------------------------------------------------GTC-------AAAGTTATTATATTTCATAACCGATTTAT---------------------TCGSizeHit CountTotal NormTotal
No Reads
droBia1
AAC---GGGGGC--------GAGCTAAACCAACAAGTGTTCGTGATC-----------CAACA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCCACT--G-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCC-G--------------------------------------------------GTC-------AA--AAATCGCATTTCGCAACCGTTCGAC---------------------TCGSizeHit CountTotal NormTotal
No Reads
droTak1
AAC---GGTGGA--------GAGCTAAACCAACAAGTGTTCGTGATC-----------CAACA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTATT--A-TCCACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCT-G--------------------------------------------------GGC-------ACTAAAATCATATTTCGTGACCGTTCGTA---------------------TCGSizeHit CountTotal NormTotal
No Reads
droEle1
AA------------------AAGCTCAACCAACAAGTGTTCGTGATC-----------CGACA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTCCC-ACT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCAGCAACT-G--------------------------------------------------GATAG---ACAT--AAATCAGTTTTTATAAGCGCTTGCT---------------------TCGSizeHit CountTotal NormTotal
No Reads
droRho1
AA------------------AAGCTAAGCCAACAAGTGTTCGTGATA-----------TATATGT-CGGATA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCT-G--------------------------------------------------GGC-------TA--AAATCAAGTTTCATAAGCGATTGCA---------------------TCCSizeHit CountTotal NormTotal
No Reads
droFic1
AAG---G---CGAAAGCCAAAAGCTAAACCAACAAGTGTTCGTGATC-----------CCATA-------TA---------------------------------------------T-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTGTT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-TCGGCAGCT-G--------------------------------------------------GGC-------AA--ATATCAATTTCCATAACCGATTGTA---------------------TCCSizeHit CountTotal NormTotal
No Reads
droKik1
GA----------------------TAAGCCAACAAGTGTTTGTGATC-----------CAAGA-------TG-------------------------------------------TCT-GATTCTTACGTAACTCTTCAAAG-GGCTGTGAAATGTTACC-GTT--A-TCTATCCATATCACAGCCATTTTGATGAGTTCCGTGTGAA--TT-TCGGCAGCC-A--------------------------------------------------GAAGG---A-----GTAC--CGCTTCGCAA---ATCAAA---------------------TCGSizeHit CountTotal NormTotal
No Reads
droAna3
AA-------------------TGCTACGCCAACAAGTGTGCTACA--AGAATCCCCTCAA-----------------------------------------AAAAGGACGATCCATCG-AGTTCTTACGTAACTCCTCAAAG-GGCTGTGAAATGTTGCC-ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGGGAA--TC-G--TCAGAA-AAC-CGTCA------------GAAAG---GGGCGCGGCGGC-------A-----G----------------GATGTCATAACCGATTGTG---------------------TT-SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23122015.0022015284667547844153759788
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................2217585.0075851605589312511045419
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................211713.0071320152749593
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................241490.00490790716130195
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................231461.0046104510613
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................221134.00134011409011
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................22198.009833570017
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................24162.0062225213416
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................19157.00570824007
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20152.005251504127
....................................................................................................................................CTCCTCAAAG-GGCTGTGAAATG......................................................................................................................................................................................22150.005081032117
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19143.00432504032
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................24128.00280007021
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21128.00282151217
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18123.00230011516
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21121.00211070004
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20119.00190120106
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................23118.0018071307
................................................................................................................................................................................TATCACAGCCATTTTGATGAT............................................................................................................................................21117.00170000017
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23115.0015111309
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................25113.0013190003
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................24111.0011120305
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22110.0010001108
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2019.009020007
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................2217.007000205
.....................................................................................................................................TCCTCAAAG-GGCTGTGAAATG......................................................................................................................................................................................2116.006300300
....................................................................................................................................CTCCTCAAAG-GGCTGTGA..........................................................................................................................................................................................1816.006100401
....................................................................................................................................CTCCTCAAAG-GGCTGTGAA.........................................................................................................................................................................................1916.006001410
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................1916.006010104
................................................................................................................................................................................TATCACAGCCATTTTGATGT.............................................................................................................................................2016.006000105
....................................................................................................................................CTCCTCAAAG-GGCTGTGAAAT.......................................................................................................................................................................................2115.005131000
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................2115.005100004
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................1814.004110002
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................1814.004040000
....................................................................................................................................CTCCTCAAAG-GGCTGTGAAA........................................................................................................................................................................................2014.004010201
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2314.004110002
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT........................................................................................................................................2514.004000211
................................................................................................................................................................................TATCACAGCCATTTTGAGT..............................................................................................................................................1943.00120000012
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA.......................................................................................................................................2613.003030000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC..........................................................................................................................................2313.003030000
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2413.003030000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTG........................................................................................................................................2533.009000207
................................................................................................................................................................................TATCACAGCCATTTTGATGAGAC..........................................................................................................................................2313.003030000
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................2113.003020001
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCA..........................................................................................................................................2313.003010002
................................................................................................................................................................................TATCACAGCCATTTTGATGATC...........................................................................................................................................2212.002000200
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTC..........................................................................................................................................2112.002020000
droBip1
AA-------------------AGCTGCGCCAACAAGTGTTCTCGA-----AGCCCCCCTA------------------------------------------ACCCGAAGATCCATCC-AGTTCTTACGTAACTCTTCAAGG-GGCTGTGAAATGTTGC--ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-CCA--AA-AAATCGCATCGTG----------GGGCG---CGGCAGGC----------------------------------GATTTCGTAACCGATTGTT---------------------C--SizeHit CountTotal NormTotal
No Reads
dp5
----------------------------CCAACAAGTGTTCGGCTCG-----------TACTTTT-TGGAC-------------------------AAAAAAAAAAAACCGTCAGCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG--CCAGCA-ATC-CATCATC----------GATCG---GGGCAGGG---C-------AGGA-TGG---A-----G-------------CACAGAGTGGA-----------------CGGAAAGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23156311.005631101841297839000899764231911075
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................22115200.001520007342925767412772500731016
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................2313063.003063022672379631000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................2211455.00145500479966280000
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................2111058.00105809190549492715012
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2411054.001054038408412391487002
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................221368.00368014212795220000
....................................................................................................................................CCCATCAAAC-GGTTGTGAAATG......................................................................................................................................................................................221333.00333045493217100009
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191187.00187017591830000
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................201160.001600275119180000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................211160.00160056794120000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................241133.00133017844460000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................241119.00119086328693002
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21180.00800831201720002
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19151.0051013329240000
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18146.0046002013310000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................23140.004000286510000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22134.003404518070000
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20134.0034021114160000
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................21125.002500718000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23124.002400106530000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................20123.002303116110001
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC..........................................................................................................................................22117.001700134000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGAC..........................................................................................................................................23116.001600142000000
....................................................................................................................................CCCATCAAAC-GGTTGTGAAA........................................................................................................................................................................................20115.00150251160000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC..........................................................................................................................................23113.001300111010000
....................................................................................................................................CCCATCAAAC-GGTTGTGAAAT.......................................................................................................................................................................................21112.00120252210000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................23110.00100307000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................24110.00100033130000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................22110.00100002620000
.....................................................................................................................................CCATCAAAC-GGTTGTGAAATG......................................................................................................................................................................................2119.0090500400000
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................1919.0090215100000
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................1819.0090140220000
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................2119.0090108000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGC...........................................................................................................................................2117.0070007000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................2017.0070502000000
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2417.0070151000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT........................................................................................................................................2516.0060122010000
....................................................................................................................................CCCATCAAAC-GGTTGTGAA.........................................................................................................................................................................................1915.0050310000001
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTT.........................................................................................................................................2014.0040001030000
droPer2
ACT---ATTTGG--------A-------CAAAAAAAAAACCGTCATC-----------C----------------------------------------------------------C-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATGG--CCAGCA-ATC-CATCATC----------GATCG---GGGCAGGG---C-------AGGA-TGG---A-----G-------------CACAGAGTGGA-----------------CGGAAAGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23114724.001472417346227965765406100
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................2214959.00495953163632380186332
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................211477.0047714592571623
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................241361.003610651531898
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191147.00147001670610
....................................................................................................................................CCCATCAAAC-GGTTGTGAAATG......................................................................................................................................................................................22193.0093134488200
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18158.005800331240
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................22142.00423311340
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................24140.004001512220
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21132.00320290210
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................22121.002100011100
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................23119.00190106120
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................24117.0017002951
....................................................................................................................................CCCATCAAAC-GGTTGTGAAAT.......................................................................................................................................................................................21115.00152100111
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................22112.0012022350
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22112.0012011640
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23110.0010000370
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20110.0010211510
....................................................................................................................................CCCATCAAAC-GGTTGTGAAA........................................................................................................................................................................................20110.0010111430
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................2019.009012240
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................2117.007001420
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................1916.006110130
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT........................................................................................................................................2516.006010140
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................1815.005011300
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................2315.005000140
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................2515.005000320
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2014.004020200
....................................................................................................................................CCCATCAAAC-GGTTGTGA..........................................................................................................................................................................................1814.004000040
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................2014.004040000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................2413.003000120
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................1813.003100020
..................................................................................................................................................................................TCACAGCCATTTTGATGAG............................................................................................................................................1913.003000210
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAA.........................................................................................................................................2412.002000110
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTT.........................................................................................................................................2012.002000020
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTA.........................................................................................................................................2012.002001010
....................................................................................................................................CCCATCAAAC-GGTTGTGAAATGA.....................................................................................................................................................................................2312.002200000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2312.002010010
................................................................................................................................................................................TATCACAGCCATTTTGATGATC...........................................................................................................................................2212.002000020
.......................................................................................................................................................................................................TCGTGTGGA--ATGG--CCAGC....................................................................................................................1812.002000020
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................1912.002002000
droWil2
A--------------------------GCCAACAAGTGTTTTTTT--GGAATCCGTTCCGGCA-------AA------------------------------------AGATG----GAATTTCTTACGTAACTCTTCAAGGGGGTTGTGAAATGTTGCC-ATTTTATTCAACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAGTATT-CCTGCAACA-G-----------------------------------------------------------------------TATTCGAAATGGATGGTATCCTTAGAATATGTGAATTGACTGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23154258.005425824712822583985612615
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................22110521.00105211793935036416258
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAATG......................................................................................................................................................................................2314092.00409224153299772
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................2111119.001119234402115728
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................241289.00289010721458
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................221157.00157211102816
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................241143.0014303001067
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................191109.001095320153
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191108.0010812016629
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................251105.001050210840
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21183.008301004627
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20163.0063860247
.....................................................................................................................................TCTTCAAGGGGGTTGTGAAATG......................................................................................................................................................................................22155.0055012439
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................23147.00470003215
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18144.00444001228
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21141.0041526037
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................22138.0038500429
...........................................................................................................................................................TTGCC-ATTTTATTCAACTCA.................................................................................................................................................................20129.0029820163
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20126.0026030716
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................22125.0025180025
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAAT.......................................................................................................................................................................................22121.0021000210
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23121.0021020811
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22120.0020010316
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................19120.0020010019
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA.......................................................................................................................................26217.0034050290
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................20116.0016000115
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................18114.001404037
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................21113.0013120001
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAA........................................................................................................................................................................................21112.0012000120
.....................................................................................................................................TCTTCAAGGGGGTTGTGAAA........................................................................................................................................................................................20111.001102153
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTTT.........................................................................................................................................22110.001000082
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................24110.001013042
.....................................................................................................................................TCTTCAAGGGGGTTGTGA..........................................................................................................................................................................................1819.00900045
.....................................................................................................................................TCTTCAAGGGGGTTGTGAAAT.......................................................................................................................................................................................2118.00800053
...........................................................................................................................................................TTGCC-ATTTTATTCAACTC..................................................................................................................................................................1918.00860011
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................2427.5015000105
....................................................................................................................................CTCTTCAAGGGGGTTGTG...........................................................................................................................................................................................1817.00710024
....................................................................................................................................CTCTTCAAGGGGGTTGTGAA.........................................................................................................................................................................................2016.00600060
....................................................................................................................................CTCTTCAAGGGGGTTGTGA..........................................................................................................................................................................................1916.00600042
................................................................................................................................................................................TATCACAGCCATTTTGATAGT............................................................................................................................................2185.88470011630
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAATT......................................................................................................................................................................................2315.00500050
................................................................................................................................................................................TATCACAGCCATTTTGATGT.............................................................................................................................................2015.00500005
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAA.........................................................................................................................................2415.00500050
................................................................................................................................................................................TATCACAGCCATTTTGATGG.............................................................................................................................................2014.00440000
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAATA......................................................................................................................................................................................2314.00400022
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTA.........................................................................................................................................2313.00303000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAT........................................................................................................................................2513.00300030
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2313.00303000
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAATC......................................................................................................................................................................................2313.00300012
................................................................................................................................................................................TATCACAGCCATTTTGATGTT............................................................................................................................................2113.00301002
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTTA.........................................................................................................................................2213.00300012
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................2112.00200002
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................2012.00201001
....................................................................................................................................CTCTTCAAGGGGGTTGTGAATG.......................................................................................................................................................................................2212.00200011
................................................................................................................................................................................TATCACAGCCATTTTGATGAT............................................................................................................................................2112.00200011
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAAA........................................................................................................................................2512.00200020
..................................................................................................................................................................................TCACAGCCATTTTGATGAG............................................................................................................................................1912.00200002
.................................................................................................................................................................................ATCACAGCCATTTTGATGA.............................................................................................................................................1912.00202000
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................1812.00200002
....................................................................................................................................CTCTTCAAGGGGGTTGTGAAATGT.....................................................................................................................................................................................2412.00200020
droVir3
AACGTCGCTTCG--------ATAC-----------GT-----------------------------------------------------------------AAAGACCAACCCACTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTTGCC-GTT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-GCT--TA-A-ATT-CATTGCCCTCGTCGGCAGAATGGGCTGGCA--------------A--GGAC------GA--TTATCGTTT-----------TTGCA---------------------TTGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................23130205.0030205224105143455520117283340003195610164461111108155841194012766533355737150522835311670727012612918275910106612111539294251454241758171185056443500101800310023121000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................22119272.0019272039944814163913194181012419161040680151713636881121390155914321653539831109385121487211232316913000000011122222200211128265376012556206004260000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................2416046.00604600201362220790000000201310734121892151211928573371293235311102872200000200000022000041573300000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2413040.00304001511692392003001025713559160142986812819482153216367994221832108161080000000011231210001161371602201100000020000
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................2111964.00196426115718160261121000113624886664388983032312171709632908002001500000000120412200139195800211200000100000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................241840.0084000110361001000015731033458109567818113258180920414745390000000000000000000412503200000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................231347.00347005243000000000001011050110010162841902000004000000000000000000039300000000000000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191248.00248101217100200001411255619791000381121105030001400000000000000000002275000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................251216.002160010001000003000001150234344352412375432391068000000000000000000000204110000000000000
....................................................................................................................................CTCTTCAAGG-GGTTGTGAAATG......................................................................................................................................................................................221204.002040023405010000024053213111000003060004210000000000000100000001046200000200000004310
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................221149.001490511030000000000031210103000002103000000000000000000000000000023000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCA........................................................................................................................................251139.00139000033100000000000001100102322519435090100511000000000000000000000201100000000000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................181124.001240000101101000034377421013000007224060030030000000000000000000139000000000000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................221115.00115008421000000000011100001300001110000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20196.00960427600000000005512330620000024010020000000000000000000000000111100000010000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21196.009600787000000000011200002000000000500000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19183.00830351510000000000321202023000000201100000000000000000000000011011000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23179.00790002000000000013014360100020141361502010012000000000000000000002000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................24175.00750010000000000025153021200000101421202001103000000000000000000008000000000000000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTC.........................................................................................................................................20173.007300101800000000000000800100009368090000316000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCT........................................................................................................................................25161.0061000000000000000000002000010099524000000010000000000000000000000100000000000000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTT.........................................................................................................................................20142.00420000020000000023100327100000132104000008000000000000000000002000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTAA.........................................................................................................................................24141.004100001000000000000010000100003451011134023000000000000000000001000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT........................................................................................................................................25137.00370000000000000044022204200000381500000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22134.00340070000000000022011211200000024600000000000000000000000000003000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA.......................................................................................................................................26225.005000000000000030000000100211512126401311310000000000000000000000000100100000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTA........................................................................................................................................25123.00230000020000000010000010000000330301001003000000000000000000000000500000000000000
.....................................................................................................................................TCTTCAAGG-GGTTGTGAAATG......................................................................................................................................................................................21121.00210012000000000000010101000001111100000000000000000000000000042300000000000000001
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................20118.00180032000000000101021000300000320000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................20117.001700170000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................21115.00150034000000000000000001000000210100000000000000000000000000011100000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTC........................................................................................................................................25114.00140000000000000000000040000000121300000003000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGAT...............................................................................................................................................18114.00140200000000000011111011000000200200000000000000000000000000001000000000000000000
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................20111.00110016100000000000010000000000000000000000000000000000000000011000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................23110.00100003000000000000000000010000000000000000000000000000000000013002000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................22110.00100300000000000010000000000000000000000000000000000000000000006000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTCC.........................................................................................................................................24110.00100000011000000000000010000100001101000003000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAT........................................................................................................................................25110.00100000000000000000000000000000420301000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTCA.........................................................................................................................................24110.00100000000000000000000000000000151201000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTCC.......................................................................................................................................2619.0090000011000000000000000000000030002000002000000000000000000000000000000000000000
....................................................................................................................................................................................ACAGCCATTTTGATGAGTTA.........................................................................................................................................2018.0080000110000000000000000000000101000000004000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................2118.0080401000000000000000000000000000000000000000000000000000000003000000000000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2318.0080043000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................1817.0070002000000000001100000010000010100000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATC..............................................................................................................................................1917.0070000000000000000000000000000320200000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGA................................................................................................................................................1736.67200000000000000000000000000000000000000000000000000200000000000009600200000000001
................................................................................................................................................................................TATCACAGCCATTTTGATGAA............................................................................................................................................2115.0050000000000000000101001000000100000000000000000000000000000001000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTTCC......................................................................................................................................2715.0050000000000000000000000000100010201000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTTT.........................................................................................................................................2215.0050001000000000012000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................1915.0050030000000000000101000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAT............................................................................................................................................2114.0040000000000000000010000010000000000000000000000000000000000002000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTTT.......................................................................................................................................2614.0040000000001000000000000000000102000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2414.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATCACAGCCATTTTGATGA.............................................................................................................................................1914.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCTC.......................................................................................................................................2614.0040000100000000000000010000000011000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTAA.......................................................................................................................................2623.5070000000000000000000000000021111100000000000000000000000000000000000000000000000
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTCAA.......................................................................................................................................2623.5070000000000000000000000000010200201010000000000000000000000000000000000000000000
................................................................................................................CCACTC-AATTCTTGCGTAA.............................................................................................................................................................................................................1913.0030000000000000010000000000000100000000000000000000000000000001000000000000000000
droMoj3
TAC---AAC-----------AAACACAACCAACAAGTGTTTGCATCT-----------CATTATATGGGAC-------------------------ACTTAACGATCTCCGCCCATTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTAGCC-ATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGTGAA--TTGCTTTCAGCA-T------TGTCC----------CATC---CGTTTTGT----GTCACTG---GATTATCCACCTCAATCTCCATCTTCATTTGCATTCGAA---------------------TTGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................231190549.0019054929361155441457518163827569
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................22117075.001707513529341070172111853145
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTC..........................................................................................................................................2319237.0092377166192070
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2413042.0030425982122264249025
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................2212246.00224628951319480
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................2211724.0017241421117060
....................................................................................................................................CTCTTCAAGG-GGTTGTGAAATG......................................................................................................................................................................................221999.0099954366125373
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................211795.00795160289012038116
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................241423.004231314543816
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................211362.0036259123450
....................................................................................................................................................................................ACAGCCATTTTGATGAGTT..........................................................................................................................................191351.0035129247951150
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................211243.002431341111060
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................241223.0022361012131811
...................................................................................................................................................................................CACAGCCATTTTGATGAGTT..........................................................................................................................................201217.0021752122070
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTG..........................................................................................................................................231111.0011110021080
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTC..........................................................................................................................................221107.0010700001070
.....................................................................................................................................................................................CAGCCATTTTGATGAGTT..........................................................................................................................................181101.001012111960
................................................................................................................................................................................TATCACAGCCATTTTGATGAGCC..........................................................................................................................................23190.00900001890
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................20175.0075244710300
....................................................................................................................................................................................ACAGCCATTTTGATGAGT...........................................................................................................................................18165.0065220172420
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................24149.00493232390
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................23146.00462000431
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................23137.00372043280
................................................................................................................................................................................TATCACAGCCATTTTGATGAGA...........................................................................................................................................22135.00355115230
................................................................................................................................................................................TATCACAGCCATTTTGATGAGAC..........................................................................................................................................23128.00280000280
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................24126.00261000250
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................19124.00241405500
...................................................................................................................................................................................CACAGCCATTTTGATGAGTC..........................................................................................................................................20124.00240000240
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................20124.00244003170
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGC...........................................................................................................................................21122.00220000220
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTC..........................................................................................................................................21122.00220000220
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT........................................................................................................................................25120.00201132130
................................................................................................................................................................................TATCACAGCCATTTTGATGAGG...........................................................................................................................................22118.0018052380
.................................................................................................................................................................................ATCACAGCCATTTTGATGAG............................................................................................................................................20117.00171400030
....................................................................................................................................CTCTTCAAGG-GGTTGTGAAAT.......................................................................................................................................................................................21115.00150100140
....................................................................................................................................CTCTTCAAGG-GGTTGTGAAA........................................................................................................................................................................................20115.00150001140
................................................................................................................................................................................TATCACAGCCATTTTGATGAC............................................................................................................................................21113.00130000130
...................................................................................................................................................................................CACAGCCATTTTGATGAGT...........................................................................................................................................19112.0012220080
....................................................................................................................................................................................ACAGCCATTTTGATGAGTC..........................................................................................................................................19111.00110000110
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA........................................................................................................................................2519.009301131
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTA.........................................................................................................................................2319.009200070
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTTT.........................................................................................................................................2217.007000070
................................................................................................................................................................................TATCACAGCCATTTTGATGATC...........................................................................................................................................2217.007000070
droGri2
TAC---A---------------ACAAAGCCAACAAGTGTTTGTATCT-----------CATTA-------TTTTATTCTTGCATACATCTGCAGACTGTGAGCGAACCAAGCCCACCC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTGGG-TATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TT-----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTT..........................................................................................................................................231455.00455293162
................................................................................................................................................................................TATCACAGCCATTTTGATGAGT...........................................................................................................................................221180.0018014436
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTT..........................................................................................................................................22128.0028280
................................................................................................................................................................................TATCACAGCCATTTTGATGAG............................................................................................................................................21121.0021201
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTT.........................................................................................................................................24119.0019118
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGT...........................................................................................................................................21117.0017170
....................................................................................................................................CTCTTCAAGG-GGTTGTGAAATG......................................................................................................................................................................................2214.00422
................................................................................................................................................................................TATCACAGCCATTTTGATGA.............................................................................................................................................2013.00321
..................................................................................................................................................................................TCACAGCCATTTTGATGAGTT..........................................................................................................................................2112.00220
................................................................................................................................................................................TATCACAGCCATTTTGATG..............................................................................................................................................1912.00220
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTA.........................................................................................................................................2412.00220
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTC.........................................................................................................................................2412.00220
.................................................................................................................................................................................ATCACAGCCATTTTGATGAGTTT.........................................................................................................................................2311.00110
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTTG.........................................................................................................................................2411.00110
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAGTT..........................................................................................................................................2411.00110
..................................................................................................................................................................................TCACAGCCATTTTGATGAGT...........................................................................................................................................2011.00110
................................................................................................................................................................................TATCACAGCCATTTTGATGAGC...........................................................................................................................................2211.00101
...............................................................................................................................................................................ATATCACAGCCATTTTGATGAG............................................................................................................................................2211.00110
................................................................................................................................................................................TATCACAGCCATTTTGATGAGTA..........................................................................................................................................2320.50101
................................................................................................................................................................................TATCACAGCCATTTTGAGT..............................................................................................................................................1960.17101

Generated: 10/20/2015 at 07:32 PM