ID:

der-mir-125

 Coordinate:

scaffold_4845:5799104-5799213 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.1 -22.1 -21.9

Flybase annnotation

utr5 [utr5_plus_2380]; pre_miRNA [Dere\mir-125-RM]; miRNA [Dere\miR-125-RA]

No Repeatable elements found

Sense Strand Reads

TGCCTTAAGTATGTAAATGCAACCGGGCATATGTAAATATTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAATAAGGCAAAAACAAAATTACTTTGAAGGCACGAGTATCGGA

***************************************************************((((((....(((((..((.((((....(((((((((...............)))))))))....)))).)).)))))..))))))....********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M055

female body

 V108

head

 V060

head

 V107

male body		 GSM1528801

follicle cells		 M057

embryo

 V040

embryo
..............................................................................TCCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 0 1 130501.00 130501 66889 50326 10492 2761 18 12 3
..............................................................................TCCCTGAGACCCTAACTTGTG............................................................................................................... 21 0 1 29445.00 29445 13998 12722 2179 316 225 3 2
..............................................................................TCCCTGAGACCCTAACTTGT................................................................................................................ 20 0 1 14637.00 14637 865 10246 592 292 2642 0 0
...............................................................................CCCTGAGACCCTAACTTGTGA.............................................................................................................. 21 0 1 5582.00 5582 5512 61 4 4 1 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAA............................................................................................................. 23 1 1 2020.00 2020 1281 607 104 26 2 0 0
..............................................................................TCCATGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 1337.00 1337 268 1045 10 14 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTG............................................................................................................... 20 0 1 1247.00 1247 1202 21 1 0 23 0 0
..............................................................................TCCCTGAGACCCTAACTTGTTA.............................................................................................................. 22 1 1 1156.00 1156 676 447 32 1 0 0 0
..............................................................................TCCCTGAGACCATAACTTGTGA.............................................................................................................. 22 1 1 975.00 975 8 953 5 9 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGT.............................................................................................................. 22 1 1 919.00 919 186 633 78 21 0 1 0
..............................................................................TCCCTGAGACCCTAACTTG................................................................................................................. 19 0 1 768.00 768 264 331 24 9 140 0 0
................................................................................CCTGAGACCCTAACTTGTGA.............................................................................................................. 20 0 1 746.00 746 210 466 60 10 0 0 0
..............................................................................TCCCTGATACCCTAACTTGTGA.............................................................................................................. 22 1 1 742.00 742 261 466 11 4 0 0 0
..............................................................................TCACTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 738.00 738 5 721 9 1 2 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGGTAT........................................................................ 21 0 1 713.00 713 116 265 13 319 0 0 0
..............................................................................TCCCTTAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 612.00 612 69 540 2 1 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTGA.............................................................................................................. 22 1 1 608.00 608 212 379 16 1 0 0 0
..............................................................................TCCCTGCGACCCTAACTTGTGA.............................................................................................................. 22 1 1 475.00 475 438 22 13 2 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTGA.............................................................................................................. 22 1 1 404.00 404 351 43 8 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTTGA.............................................................................................................. 22 1 1 400.00 400 233 140 23 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACT............................................................................................................ 24 0 1 383.00 383 275 97 8 3 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGA................................................................................................................ 20 1 1 359.00 359 222 132 0 5 0 0 0
..............................................................................TACCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 334.00 334 5 321 5 3 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGTGA.............................................................................................................. 22 1 1 288.00 288 250 25 11 2 0 0 0
..............................................................................TCCATGAGACCCTAACTTGTG............................................................................................................... 21 1 1 283.00 283 46 235 0 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGGGA.............................................................................................................. 22 1 1 267.00 267 241 21 5 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTT............................................................................................................... 21 1 1 226.00 226 172 46 8 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAC............................................................................................................. 23 0 1 218.00 218 179 29 8 2 0 0 0
..............................................................................TCCATGAGACCCTAACTTGT................................................................................................................ 20 1 1 215.00 215 5 206 0 3 1 0 0
..............................................................................TCCCTGAGACCATAACTTGTG............................................................................................................... 21 1 1 206.00 206 0 205 0 1 0 0 0
................................................................................CCTGAGACCCTAACTTGTG............................................................................................................... 19 0 1 204.00 204 36 151 15 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGC.............................................................................................................. 22 1 1 187.00 187 19 26 140 2 0 0 0
..............................................................................TCCCTGAGACCATAACTTGT................................................................................................................ 20 1 1 184.00 184 0 180 0 1 3 0 0
..............................................................................TCACTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 183.00 183 0 178 1 1 2 1 0
..............................................................................CCCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 173.00 173 85 65 19 4 0 0 0
..............................................................................TCCCTGATACCCTAACTTGTG............................................................................................................... 21 1 1 165.00 165 50 111 4 0 0 0 0
..............................................................................TCACTGAGACCCTAACTTGT................................................................................................................ 20 1 1 158.00 158 0 140 0 0 18 0 0
...............................................................................CCCTGAGACCCTAACTTGT................................................................................................................ 19 0 1 156.00 156 59 13 2 0 82 0 0
..............................................................................TCCCTGAGACCTTAACTTGTGA.............................................................................................................. 22 1 1 151.00 151 99 33 17 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGCGA.............................................................................................................. 22 1 1 149.00 149 45 72 28 4 0 0 0
..............................................................................TCCCTGAGACCCTAATTTGTGA.............................................................................................................. 22 1 1 147.00 147 95 48 4 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAT............................................................................................................. 23 1 1 147.00 147 56 75 11 5 0 0 0
..............................................................................TCTCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 145.00 145 18 93 34 0 0 0 0
..............................................................................TCCCTGAGAACCTAACTTGTGA.............................................................................................................. 22 1 1 145.00 145 11 129 4 1 0 0 0
..............................................................................TTCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 142.00 142 76 55 9 2 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGTGA.............................................................................................................. 22 1 1 142.00 142 3 37 94 7 1 0 0
..............................................................................TCCCTTAGACCCTAACTTGTG............................................................................................................... 21 1 1 140.00 140 15 124 0 0 1 0 0
..............................................................................TCCCCGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 139.00 139 68 62 9 0 0 0 0
.............................................................................CTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 1 1 134.00 134 93 36 5 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTAA.............................................................................................................. 22 1 1 130.00 130 86 28 15 1 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTG............................................................................................................... 21 1 1 130.00 130 43 87 0 0 0 0 0
..............................................................................TGCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 128.00 128 104 11 4 9 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGAA............................................................................................................. 22 1 1 124.00 124 123 1 0 0 0 0 0
..............................................................................TCCCTGAGACCCTACCTTGTGA.............................................................................................................. 22 1 1 122.00 122 1 31 87 3 0 0 0
..............................................................................TCCCTGCGACCCTAACTTGTG............................................................................................................... 21 1 1 120.00 120 110 8 2 0 0 0 0
..............................................................................TCCCTGATACCCTAACTTGT................................................................................................................ 20 1 1 118.00 118 1 112 1 0 4 0 0
..............................................................................TCCCTGAAACCCTAACTTGTGA.............................................................................................................. 22 1 1 117.00 117 87 26 4 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGG.............................................................................................................. 22 1 1 116.00 116 43 60 9 4 0 0 0
..............................................................................TCGCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 114.00 114 65 49 0 0 0 0 0
..............................................................................ACCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 113.00 113 86 22 2 3 0 0 0
..............................................................................TCCCTGAGACCCTGACTTGT................................................................................................................ 20 1 1 113.00 113 0 3 2 0 108 0 0
.................................................................................CTGAGACCCTAACTTGTGA.............................................................................................................. 19 0 1 113.00 113 37 57 8 11 0 0 0
..............................................................................TCCCTTAGACCCTAACTTGT................................................................................................................ 20 1 1 111.00 111 1 108 0 0 2 0 0
..............................................................................TACCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 108.00 108 0 103 5 0 0 0 0
..............................................................................TCCCTGAGACACTAACTTGT................................................................................................................ 20 1 1 107.00 107 3 103 1 0 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGTGA.............................................................................................................. 22 1 1 104.00 104 34 51 16 3 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTTG............................................................................................................... 21 1 1 103.00 103 52 41 9 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACTT........................................................................................................... 25 0 1 102.00 102 61 33 8 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTCGTGA.............................................................................................................. 22 1 1 101.00 101 19 65 15 2 0 0 0
................................................................................CCTGAGACCCTAACTTGT................................................................................................................ 18 0 1 100.00 100 2 86 6 1 5 0 0
..............................................................................TCCCTGAGACCCTAACCTGTGA.............................................................................................................. 22 1 1 99.00 99 23 61 12 2 0 0 1
..............................................................................GCCCTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 95.00 95 68 19 1 7 0 0 0
..............................................................................TCCCTGAGACCCTAAATTGTGA.............................................................................................................. 22 1 1 93.00 93 1 86 6 0 0 0 0
..............................................................................TCCCTGGGACCCTAACTTGTGA.............................................................................................................. 22 1 1 88.00 88 24 51 12 1 0 0 0
..............................................................................TCCCTAAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 87.00 87 37 41 6 3 0 0 0
..............................................................................TCCCTGAGACCCCAACTTGTGA.............................................................................................................. 22 1 1 84.00 84 33 46 4 1 0 0 0
..............................................................................TCCTTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 83.00 83 23 28 29 3 0 0 0
..............................................................................TCCCTGAGACCCTAACGTGTGA.............................................................................................................. 22 1 1 82.00 82 73 2 6 1 0 0 0
..............................................................................TCCCTGAGATCCTAACTTGTGA.............................................................................................................. 22 1 1 81.00 81 33 36 9 3 0 0 0
..............................................................................TACCTGAGACCCTAACTTGT................................................................................................................ 20 1 1 79.00 79 0 76 0 0 3 0 0
..............................................................................TCCCTGAGACCCTCACTTGT................................................................................................................ 20 1 1 77.00 77 0 11 6 0 60 0 0
..............................................................................TCCCTGAGACTCTAACTTGTGA.............................................................................................................. 22 1 1 75.00 75 24 38 10 3 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTG............................................................................................................... 21 1 1 72.00 72 63 8 1 0 0 0 0
.............................................................................GTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 1 1 71.00 71 71 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTCA.............................................................................................................. 22 1 1 70.00 70 30 32 6 2 0 0 0
...............................................................................TCCTGAGACCCTAACTTGTGA.............................................................................................................. 21 1 1 69.00 69 17 49 2 1 0 0 0
.............................................................................TTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 0 1 69.00 69 69 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTATGA.............................................................................................................. 22 1 1 69.00 69 24 38 7 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAAA............................................................................................................ 24 2 1 67.00 67 30 30 4 3 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTA............................................................................................................... 21 1 1 63.00 63 32 26 5 0 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGTG............................................................................................................... 21 1 1 62.00 62 52 8 2 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCTGA.............................................................................................................. 22 1 1 61.00 61 14 33 12 2 0 0 0
...................................................................................................................TCACAAGTTTTGATCTCCGGTAT........................................................................ 23 0 1 60.00 60 19 25 2 11 3 0 0
..............................................................................TCCCTGAGACCCTAGCTTGTGA.............................................................................................................. 22 1 1 57.00 57 14 31 11 1 0 0 0
..............................................................................TCCCTGAGACCCTGACTTGTGA.............................................................................................................. 22 1 1 57.00 57 16 31 8 1 1 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACTTT.......................................................................................................... 26 0 1 56.00 56 32 19 4 1 0 0 0
.............................................................................ATCCCTGAGACCCTAACTTGTGA.............................................................................................................. 23 1 1 54.00 54 53 1 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTT.................................................................................................................. 18 0 1 53.00 53 13 10 0 1 29 0 0
..............................................................................TCCCTGAGACCCTAACTTGGG............................................................................................................... 21 1 1 51.00 51 47 2 2 0 0 0 0
..............................................................................TCCATGAGACCATAACTTGTGA.............................................................................................................. 22 2 1 50.00 50 0 50 0 0 0 0 0
..............................................................................TCCCTCAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 49.00 49 9 30 6 3 0 0 1
..............................................................................TCCGTGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 48.00 48 7 39 1 1 0 0 0
.................................................................................CTGAGACCCTAACTTGT................................................................................................................ 17 0 1 46.00 46 0 0 0 0 46 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGAG............................................................................................................. 23 1 1 43.00 43 21 18 4 0 0 0 0
.............................................................................CTCCCTGAGACCCTAACTTGTG............................................................................................................... 22 1 1 40.00 40 27 11 2 0 0 0 0
..............................................................................TCACTGAGACCATAACTTGTGA.............................................................................................................. 22 2 1 38.00 38 0 38 0 0 0 0 0
..................................................................................TGAGACCCTAACTTGTGA.............................................................................................................. 18 0 1 37.00 37 17 16 1 3 0 0 0
..............................................................................CCCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 37.00 37 17 17 3 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGAGA.............................................................................................................. 22 1 1 36.00 36 21 8 5 2 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTT................................................................................................................ 20 1 1 35.00 35 2 29 1 0 3 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGGTATT....................................................................... 22 0 1 35.00 35 9 10 1 15 0 0 0
..............................................................................TCCCTGAGAACCTAACTTGTG............................................................................................................... 21 1 1 35.00 35 3 30 2 0 0 0 0
..............................................................................TCCCTGAGACCCTAAATTGTG............................................................................................................... 21 1 1 35.00 35 1 30 1 0 3 0 0
..............................................................................TGCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 34.00 34 25 6 2 1 0 0 0
..............................................................................TCCCTGAGACCCTATCTTGTGA.............................................................................................................. 22 1 1 34.00 34 26 6 1 1 0 0 0
..............................................................................TCCCTGAGAACCTAACTTGT................................................................................................................ 20 1 1 33.00 33 0 28 0 0 5 0 0
..............................................................................TCCCTGAGACCCTTACTTGTGA.............................................................................................................. 22 1 1 33.00 33 25 4 3 1 0 0 0
..............................................................................TCCCTGAGACCCTAAATTGT................................................................................................................ 20 1 1 32.00 32 0 23 1 0 8 0 0
..............................................................................TCCCTGAGACCTTAACTTGTG............................................................................................................... 21 1 1 32.00 32 22 7 3 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGCG............................................................................................................... 21 1 1 32.00 32 7 18 6 0 1 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGACTTTT......................................................................................................... 27 0 1 31.00 31 20 10 0 1 0 0 0
..............................................................................TCCCTGAGACCCGAACTTGTGA.............................................................................................................. 22 1 1 31.00 31 25 1 5 0 0 0 0
..............................................................................TCCCTGAGACCCTCACTTGTG............................................................................................................... 21 1 1 29.00 29 1 7 16 0 5 0 0
.................................................................................CTGAGACCCTAACTTGTG............................................................................................................... 18 0 1 29.00 29 8 18 0 3 0 0 0
..............................................................................TCCCTGAGGCCCTAACTTGTG............................................................................................................... 21 1 1 28.00 28 9 16 3 0 0 0 0
..............................................................................TCTCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 28.00 28 2 23 3 0 0 0 0
..............................................................................TCCCTGACACACTAACTTGTGA.............................................................................................................. 22 2 1 28.00 28 28 0 0 0 0 0 0
..............................................................................TCCCTGAGCCACTAACTTGTGA.............................................................................................................. 22 2 1 28.00 28 27 0 1 0 0 0 0
.............................................................................CTCCCTGAGACCCTAACTTGT................................................................................................................ 21 1 1 28.00 28 1 21 1 0 5 0 0
..............................................................................TCCCCGAGACCCTAACTTGTG............................................................................................................... 21 1 1 28.00 28 14 13 1 0 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTGA.............................................................................................................. 22 1 1 27.00 27 4 7 15 1 0 0 0
..............................................................................GCCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 27.00 27 17 8 1 1 0 0 0
..............................................................................TCCATGAGACACTAACTTGTGA.............................................................................................................. 22 2 1 27.00 27 5 22 0 0 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGGGA.............................................................................................................. 22 2 1 26.00 26 26 0 0 0 0 0 0
..............................................................................TCGCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 26.00 26 12 14 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTC............................................................................................................... 21 1 1 26.00 26 15 8 1 2 0 0 0
..............................................................................TCCATGAGACCCTAACTTGTGAA............................................................................................................. 23 2 1 25.00 25 7 17 0 1 0 0 0
..............................................................................TTCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 24.00 24 15 6 2 0 1 0 0
...............................................................................CCCTGAGAACCTAACTTGTGA.............................................................................................................. 21 1 1 24.00 24 23 1 0 0 0 0 0
.............................................................................ATCCCTGAGACCCTAACTTGT................................................................................................................ 21 1 1 24.00 24 1 0 0 0 23 0 0
...............................................................................CCCTGAGACCCTAACTTGTGG.............................................................................................................. 21 1 1 23.00 23 23 0 0 0 0 0 0
..............................................................................ACCCTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 23.00 23 17 6 0 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTG................................................................................................................. 18 0 1 23.00 23 23 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTGGTGA.............................................................................................................. 22 1 1 22.00 22 0 4 18 0 0 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGGTA......................................................................... 20 0 1 22.00 22 2 14 2 4 0 0 0
..............................................................................TCCCTGAGACCCTAACTCGTG............................................................................................................... 21 1 1 22.00 22 4 15 3 0 0 0 0
..............................................................................TCCCTGAGATCCTAACTTGTG............................................................................................................... 21 1 1 22.00 22 6 12 4 0 0 0 0
..............................................................................TCCCTGAGCCACTAACTTGGGA.............................................................................................................. 22 3 1 21.00 21 21 0 0 0 0 0 0
..............................................................................TCTCTGAGACCCTAACTTGT................................................................................................................ 20 1 1 21.00 21 1 18 1 0 1 0 0
..............................................................................TCCCTGAGACCCAAACTTGTGA.............................................................................................................. 22 1 1 21.00 21 10 10 1 0 0 0 0
..............................................................................TCCTTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 21.00 21 7 8 6 0 0 0 0
..............................................................................TCCCTGAGACCCTACCTTGTG............................................................................................................... 21 1 1 21.00 21 0 8 13 0 0 0 0
..............................................................................TCGCTGAGACCCTAACTTGT................................................................................................................ 20 1 1 21.00 21 0 12 0 1 8 0 0
..............................................................................TCCCGGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 21.00 21 3 14 4 0 0 0 0
..............................................................................TCCCTGAAACCCTAACTTGTG............................................................................................................... 21 1 1 21.00 21 16 4 1 0 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTGA.............................................................................................................. 22 1 1 20.00 20 10 7 2 1 0 0 0
..............................................................................TCCCTGAGACCCTAATTTGTG............................................................................................................... 21 1 1 20.00 20 15 5 0 0 0 0 0
...............................................................................CCCTGATACCCTAACTTGTGA.............................................................................................................. 21 1 1 20.00 20 20 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTGGT................................................................................................................ 20 1 1 20.00 20 1 0 2 0 17 0 0
..............................................................................TCCCTGAGACCCTAACTTGTTAA............................................................................................................. 23 2 1 19.00 19 14 5 0 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGAC............................................................................................................. 22 0 1 19.00 19 16 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCTG............................................................................................................... 21 1 1 19.00 19 5 10 4 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTGGGA.............................................................................................................. 21 1 1 19.00 19 19 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCCAACTTGTG............................................................................................................... 21 1 1 19.00 19 7 11 1 0 0 0 0
........................................................................TCTTAATCCCTGAGACCCTAACTTGT................................................................................................................ 26 3 1 19.00 19 0 0 0 0 19 0 0
..............................................................................TCCCTGAGACCCTAACTAGTGA.............................................................................................................. 22 1 1 18.00 18 2 14 2 0 0 0 0
....................................................................................................................CACAAGTTTTGATCTCCGGTAT........................................................................ 22 0 1 18.00 18 7 7 0 4 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGT.............................................................................................................. 21 1 1 18.00 18 18 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACGTGTG............................................................................................................... 21 1 1 18.00 18 14 1 2 0 1 0 0
..............................................................................TCCCTGAGACCATAACTTGTGT.............................................................................................................. 22 2 1 18.00 18 0 17 0 1 0 0 0
...............................................................................CCCTGAAACCCTAACTTGTGA.............................................................................................................. 21 1 1 17.00 17 17 0 0 0 0 0 0
..............................................................................TCCGTGAGACCCTAACTTGT................................................................................................................ 20 1 1 17.00 17 0 13 1 0 3 0 0
..........................................................................TGGGTCCCTGAGACCCTAACTTGT................................................................................................................ 24 2 1 17.00 17 0 0 0 0 17 0 0
......................................................................................................................CAAGTTTTGATCTCCGGTAT........................................................................ 20 0 1 17.00 17 15 1 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGC................................................................................................................ 20 1 1 16.00 16 0 15 0 0 1 0 0
..............................................................................TCCATGAGACCATAACTTGTG............................................................................................................... 21 2 1 16.00 16 0 16 0 0 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTTA.............................................................................................................. 22 2 1 16.00 16 15 0 0 1 0 0 0
.............................................................................TTCCCTGAGACCCTAACTTGTG............................................................................................................... 22 0 1 16.00 16 16 0 0 0 0 0 0
..............................................................................TCCCTCAGACCCTAACTTGTG............................................................................................................... 21 1 1 16.00 16 0 12 4 0 0 0 0
..............................................................................TCCCTGAGACCCTAAGTTGTGA.............................................................................................................. 22 1 1 16.00 16 3 12 1 0 0 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGGTATA....................................................................... 22 1 1 15.00 15 0 14 0 1 0 0 0
...............................................................................CCCTGAGACCCTAACTTGA................................................................................................................ 19 1 1 15.00 15 15 0 0 0 0 0 0
..............................................................................TCCCTGACACCCTAACTTGT................................................................................................................ 20 1 1 15.00 15 2 12 1 0 0 0 0
..............................................................................CCCCTGAGACCCTAACTTGT................................................................................................................ 20 1 1 15.00 15 2 9 3 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTGA............................................................................................................... 21 3 1 15.00 15 14 1 0 0 0 0 0
..............................................................................TCCCTGAGACCCTACCTTGT................................................................................................................ 20 1 1 15.00 15 0 8 7 0 0 0 0
..............................................................................TCCCTGAGACCCTAGCTTGTG............................................................................................................... 21 1 1 15.00 15 6 8 1 0 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGTG............................................................................................................... 21 1 1 15.00 15 2 12 1 0 0 0 0
..............................................................................TCCCAGAGACCCTAACTTGTGA.............................................................................................................. 22 1 1 14.00 14 6 3 4 1 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGACT............................................................................................................ 23 0 1 14.00 14 14 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTTACTTGT................................................................................................................ 20 1 1 14.00 14 0 4 0 0 10 0 0
..............................................................................TCCCTGAGACCCTAACTGGTG............................................................................................................... 21 1 1 14.00 14 0 0 13 0 1 0 0
.............................................................................GTCCCTGAGACCCTAACTTGTG............................................................................................................... 22 1 1 14.00 14 14 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTATCTTGTG............................................................................................................... 21 1 1 14.00 14 11 2 1 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTCGT................................................................................................................ 20 1 1 14.00 14 0 13 0 0 1 0 0
..............................................................................TCACTGAGACACTAACTTGTGA.............................................................................................................. 22 2 1 14.00 14 0 14 0 0 0 0 0
..............................................................................TCCCTGTGACCCTAACTTGTGA.............................................................................................................. 22 1 1 14.00 14 1 6 7 0 0 0 0
..............................................................................TCCCTGAGACTCTAACTTGT................................................................................................................ 20 1 1 13.00 13 1 11 0 0 1 0 0
..................................................................................................................TTCACAAGTTTTGATCTCCGGTAT........................................................................ 24 0 1 13.00 13 2 5 0 6 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTGT.............................................................................................................. 22 2 1 13.00 13 4 9 0 0 0 0 0
...............................................................................TCCTGAGACCCTAACTTGTG............................................................................................................... 20 1 1 13.00 13 5 6 2 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTTT.............................................................................................................. 22 2 1 13.00 13 12 0 1 0 0 0 0
................................................................................CCTGAGACCATAACTTGTGA.............................................................................................................. 20 1 1 13.00 13 0 12 1 0 0 0 0
..............................................................................TCCCCGAGACCCTAACTTGT................................................................................................................ 20 1 1 12.00 12 1 8 0 0 3 0 0
...............................................................................CCCTGAGACCATAACTTGTGA.............................................................................................................. 21 1 1 12.00 12 11 1 0 0 0 0 0
..............................................................................TCCACGAGACCCTAACTTGTGA.............................................................................................................. 22 2 1 12.00 12 12 0 0 0 0 0 0
..............................................................................TACCTGAGACCATAACTTGTGA.............................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0 0
..............................................................................TCCCTGAGACCGTAACTTGTGA.............................................................................................................. 22 1 1 12.00 12 4 5 3 0 0 0 0
..............................................................................TCCCTGAGACCCTGACTTGTG............................................................................................................... 21 1 1 12.00 12 1 5 3 0 3 0 0
..............................................................................TCCCTGAGACACTAACTTGGGA.............................................................................................................. 22 2 1 12.00 12 12 0 0 0 0 0 0
..............................................................................TCCGTGAGACCCTAACTTGTG............................................................................................................... 21 1 1 12.00 12 2 10 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACCTGT................................................................................................................ 20 1 1 12.00 12 0 9 0 0 3 0 0
..............................................................................TCCATGAGACCCTAACTTGTGT.............................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGG................................................................................................................ 20 1 1 12.00 12 4 3 2 0 3 0 0
..............................................................................TCCCTGAAACCCTAACTTGT................................................................................................................ 20 1 1 12.00 12 1 9 0 1 1 0 0
..............................................................................TCCCTGCGCCCCTAACTTGTGA.............................................................................................................. 22 2 1 12.00 12 12 0 0 0 0 0 0
..............................................................................TCCCTGAGATCCTAACTTGT................................................................................................................ 20 1 1 11.00 11 0 6 1 2 2 0 0
..............................................................................TCCCTGAGACCCTAACATGTGA.............................................................................................................. 22 1 1 11.00 11 3 4 3 1 0 0 0
..............................................................................TCCCTAAGACCCTAACTTGT................................................................................................................ 20 1 1 11.00 11 2 7 2 0 0 0 0
................................................................................CATGAGACCCTAACTTGTGA.............................................................................................................. 20 1 1 11.00 11 0 11 0 0 0 0 0
..............................................................................TCCCTGCGACCCTAACTTGTGAA............................................................................................................. 23 2 1 11.00 11 11 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTCT................................................................................................................ 20 1 1 11.00 11 0 7 3 1 0 0 0
..............................................................................TCCCTGAGTCCCTAACTTGTG............................................................................................................... 21 1 1 11.00 11 2 2 7 0 0 0 0
..............................................................................TCCCTGAGACCCCAACTTGT................................................................................................................ 20 1 1 11.00 11 0 9 0 0 2 0 0
..............................................................................TCCCTGAGGCCCTAACTTGT................................................................................................................ 20 1 1 11.00 11 1 10 0 0 0 0 0
..............................................................................TCCCTGAGCCCCTAACTTGT................................................................................................................ 20 1 1 11.00 11 4 4 0 0 3 0 0
..............................................................................TCCCTGCGCCCCTAACTTTTGA.............................................................................................................. 22 3 1 11.00 11 11 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACGTGT................................................................................................................ 20 1 1 11.00 11 2 3 0 0 6 0 0
.........................................................................................................AATACCAGTTTCACAAGTTTTGATCTCCGG........................................................................... 30 0 1 11.00 11 0 0 0 0 11 0 0
..............................................................................TCCCTGAGACCCTAATTTGT................................................................................................................ 20 1 1 11.00 11 0 11 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTGA................................................................................................................. 19 2 2 10.50 21 4 17 0 0 0 0 0
..............................................................................TCCCTGGGACCCTAACTTGTG............................................................................................................... 21 1 1 10.00 10 4 6 0 0 0 0 0
..............................................................................TCCCTAAGACCCTAACTTGTG............................................................................................................... 21 1 1 10.00 10 5 3 1 1 0 0 0
.............................................................................ATCCCTGAGACCCTAACTTGTG............................................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0 0
..............................................................................TCACTGAGACCATAACTTGTG............................................................................................................... 21 2 1 10.00 10 0 10 0 0 0 0 0
...............................................................................TCCTGAGACCCTAACTTGT................................................................................................................ 19 1 1 10.00 10 0 9 0 1 0 0 0
..................................................................................TGAGACCCTAACTTGT................................................................................................................ 16 0 1 10.00 10 0 0 0 0 10 0 0
..............................................................................TCCCTGCGACCCTAACTTGT................................................................................................................ 20 1 1 10.00 10 4 6 0 0 0 0 0
...............................................................................CCCTGAGAACCTAACTTGTG............................................................................................................... 20 1 1 10.00 10 10 0 0 0 0 0 0
..............................................................................TTCCTGAGACCCTAACTTGT................................................................................................................ 20 1 1 10.00 10 1 7 1 0 1 0 0
..............................................................................TCCCTGAGACCCTAACTTATG............................................................................................................... 21 1 1 9.00 9 4 4 0 1 0 0 0
..............................................................................ACCCTGAGACCCTAACTTGT................................................................................................................ 20 1 1 9.00 9 3 3 0 1 2 0 0
..............................................................................TCCATGAGACCCTAACTTG................................................................................................................. 19 1 1 9.00 9 0 9 0 0 0 0 0
..............................................................................TCCCTGACACACTAACTTGTG............................................................................................................... 21 2 1 9.00 9 9 0 0 0 0 0 0
..............................................................................TCACTGAGACCATAACTTGT................................................................................................................ 20 2 1 9.00 9 0 9 0 0 0 0 0
..............................................................................TCCCTTAGACCCTAACTTGTTA.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGT................................................................................................................ 20 1 1 9.00 9 0 1 0 1 7 0 0
............................................................................ATTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 24 0 1 9.00 9 9 0 0 0 0 0 0
...............................................................................CTCTGAGACCCTAACTTGTGA.............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTTGAA............................................................................................................. 23 2 1 8.00 8 6 2 0 0 0 0 0
................................................................................CCTGAGACCCTAACTTGTTA.............................................................................................................. 20 1 1 8.00 8 1 7 0 0 0 0 0
..............................................................................TCCCTGGGACCCTAACTTGT................................................................................................................ 20 1 1 8.00 8 0 7 0 0 1 0 0
..............................................................................TCACTGAGACCCTAACTTGTGT.............................................................................................................. 22 2 1 8.00 8 0 6 2 0 0 0 0
................................................................................CCTGAGACCCTAACTTGTGAA............................................................................................................. 21 1 1 8.00 8 3 4 1 0 0 0 0
..............................................................................TCCTTGAGACCCTAACTTGT................................................................................................................ 20 1 1 8.00 8 0 6 2 0 0 0 0
..............................................................................TCCCTGAGACCTTAACTTGT................................................................................................................ 20 1 1 8.00 8 0 8 0 0 0 0 0
...............................................................................CCCTGACACCCTAACTTGTGA.............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
...............................................................................CCCTGTGACCCTAACTTGTGA.............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
..............................................................................TCCACGAGACCCTAACTTGTG............................................................................................................... 21 2 1 8.00 8 7 1 0 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTGAT............................................................................................................. 22 1 1 8.00 8 8 0 0 0 0 0 0
...............................................................................CCCCGAGACCCTAACTTGTGA.............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
...............................................................................CCCTCAGACCCTAACTTGTGA.............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
..............................................................................TCCCTGAGACGCTAACTTGTGA.............................................................................................................. 22 1 1 8.00 8 3 4 1 0 0 0 0
.....................................................................................................................ACAAGTTTTGATCTCCGG........................................................................... 18 0 1 8.00 8 0 8 0 0 0 0 0
...............................................................................CCCTGAGACCCTAACCTGTGA.............................................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0 0
...............................................................................TCCCTAGACCCTAACTTGTGA.............................................................................................................. 21 3 1 8.00 8 4 3 0 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGAG............................................................................................................... 21 1 1 8.00 8 5 3 0 0 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTT............................................................................................................... 21 2 1 8.00 8 8 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGTA............................................................................................................. 23 2 1 8.00 8 5 0 2 1 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGATT............................................................................................................ 24 1 1 8.00 8 6 2 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTTG................................................................................................................ 20 2 1 8.00 8 6 2 0 0 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTGAA............................................................................................................. 23 2 1 7.00 7 2 5 0 0 0 0 0
..............................................................................TCCATGAGAACCTAACTTGTGA.............................................................................................................. 22 2 1 7.00 7 0 7 0 0 0 0 0
...............................................................................CGCTGAGACCCTAACTTGTGA.............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
..............................................................................TCCCTGAGACACTAACTTGTTA.............................................................................................................. 22 2 1 7.00 7 7 0 0 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTAA.............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
..............................................................................TCCCTGAGACTCTAACTTGTG............................................................................................................... 21 1 1 7.00 7 0 7 0 0 0 0 0
..............................................................................TCCCTGAGAGCCTAACTTGTG............................................................................................................... 21 1 1 7.00 7 2 3 0 0 2 0 0
..............................................................................TCCCTGAGACCCTAACTCTTGA.............................................................................................................. 22 2 1 7.00 7 3 4 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTA................................................................................................................. 19 1 1 7.00 7 7 0 0 0 0 0 0
...............................................................................CCCTGAGACCCGAACTTGTGA.............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTCCCTTGTGA.............................................................................................................. 22 2 1 7.00 7 0 0 6 1 0 0 0
..............................................................................TCCCTGAGACGCTAACTTGT................................................................................................................ 20 1 1 7.00 7 0 0 0 0 7 0 0
..............................................................................TCACTGAGACCCTAACTTG................................................................................................................. 19 1 1 7.00 7 0 4 0 0 3 0 0
..............................................................................TCCCTGACACCCTAACTTGTGT.............................................................................................................. 22 2 1 7.00 7 5 2 0 0 0 0 0
...............................................................................CCCTGAGACCCTAACTTGTTA.............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
..............................................................................TCCCTGAGCCACTAACTTGTG............................................................................................................... 21 2 1 6.00 6 6 0 0 0 0 0 0
...............................................................................CCCTGAGACCCCAACTTGTGA.............................................................................................................. 21 1 1 6.00 6 6 0 0 0 0 0 0
..............................................................................TCCCTTAGACCCTAACTTGTGAA............................................................................................................. 23 2 1 6.00 6 1 5 0 0 0 0 0
........................................................................TGTAATTCCCTGAGACCCTAACTTG................................................................................................................. 25 3 1 6.00 6 0 0 0 0 6 0 0
..............................................................................TCCATGAGACCATAACTTGT................................................................................................................ 20 2 2 6.00 12 0 12 0 0 0 0 0
..............................................................................TCCCTGACACACTAATTTGTG............................................................................................................... 21 3 1 6.00 6 6 0 0 0 0 0 0
..............................................................................TACCTGAGACACTAACTTGTGA.............................................................................................................. 22 2 1 6.00 6 0 5 1 0 0 0 0
..............................................................................TCCCTGACACCCTAACTTGTGAA............................................................................................................. 23 2 1 6.00 6 4 2 0 0 0 0 0
..............................................................................TCCCTGAGACCATAACTTGTGAA............................................................................................................. 23 2 1 6.00 6 0 6 0 0 0 0 0
............................................................................CTTCCCTGAGACCCTAACTTGTGA.............................................................................................................. 24 1 1 6.00 6 6 0 0 0 0 0 0
..............................................................................TCCCTGATACCCTAACTTGTTA.............................................................................................................. 22 2 1 6.00 6 3 3 0 0 0 0 0
..............................................................................TCCCTGAGACCCTAACTTGTGTT............................................................................................................. 23 2 1 6.00 6 5 0 1 0 0 0 0
...............................................................................CCCTGAGACCCTAATTTGTGA.............................................................................................................. 21 1 1 6.00 6 6 0 0 0 0 0 0
..............................................................................TCCCTGAGACCCTTACTTGTG............................................................................................................... 21 1 1 6.00 6 4 0 0 0 2 0 0
..............................................................................TCCCTGAGACCCTGACTTG................................................................................................................. 19 1 1 6.00 6 0 0 0 0 6 0 0

Anti-sense strand reads

ACGGAATTCATACATTTACGTTGGCCCGTATACATTTATAACCGTAACCACTGTACACGTTTACAAACATACCGACTAAGGGACTCTGGGATTGAACACTGAAAATTATGGTCAAAGTGTTCAAAACTAGAGGCCATAACCTGCGTTTGAACGACTACAATCATTTTTTATTCCGTTTTTGTTTTAATGAAACTTCCGTGCTCATAGCCT

*********************************************************((((((....(((((..((.((((....(((((((((...............)))))))))....)))).)).)))))..))))))....*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040

embryo

 M055

female body
GCGGTATTCAGACATTTACGTT............................................................................................................................................................................................ 22 3 2 0.50 1 1 0
TCGGTATTCATACATGTACGTT............................................................................................................................................................................................ 22 3 6 0.17 1 1 0
......................................................................ACCGACTAAGGGGCAATGGG........................................................................................................................ 20 3 12 0.08 1 0 1
.................................................ACTCTACACCTTTACAAACAC............................................................................................................................................ 21 3 13 0.08 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4845:5799054-5799263 - der-mir-125 Known_mirbase T-GCCT----TA---------------AGTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAAA-CAAA---ATTACTTTGAAGGC-ACGAG--TATCGGA
droYak3 2R:4989064-4989273 + dya-mir-125 Known_mirbase T-GCCT----TA---------------AGTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAAA-AGAA---ATTACTTTAAAGGC-ACGAC--TATCGGA
droSec2 scaffold_7:2098214-2098426 + dse-mir-125 Known_mirbase T-GCCT--AATG---------------CCTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA---TA-----AGGCAAAGA-CGAA---TTCTCTTGCGAGGC-ACAAG--TAGCGGA
droSim2 2l:18033282-18033490 + dsi-mir-125 Known_mirbase T-GCCT----AA----------------GTATGTA---------AATGCAAC---CGGGCGT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAGG-CGAA---TTCTCTTTCAAGGC-ACAAG--TATCGGA
dm3 chr2L:18472266-18472474 + dme-mir-125 Known_mirbase T-GCCA----AA----------------GTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAAA-CGAA---TTCCCTTTCAAGGC-ACAAG--TATCGGC
droEug1 scf7180000409447:414894-415109 + T-GCCT----TG---------------GTTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATG-AAAAA----TAAACAAAGGCAAAAA-CAAA---AGCTGATGGAGGGC-AGCAAT-AAATGGA
droBia1 scf7180000302422:5215188-5215399 - T-GCCT----TG---------------GACTTTTG---------AATGCATC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA-------CAAAGGCAAGAC-CAAA---AGCTGATCGAGAGC-GGTTT--TATCAAA
droTak1 scf7180000415867:747178-747389 + T-GCCT----TG---------------GACTTTTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA-------CAAAGGCAAAAA-CCAA---AGCTAACCATGGGC-AGTAT--TATCGGA
droEle1 scf7180000491338:2439723-2439942 + T-GCCT----TG---------------GATATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA-G-AAAACCCAGGCAAAAA-CAATAACAACTGATCGACGGT-AGTAA--AATCGGA
droRho1 scf7180000780227:12856-13068 + A-GCCT----TG---------------GAAATGTA---------AATGCATC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA------ACAAAGGCAAAAG-CAAA---AACTGATCGAGAAC-AGTAT--TATTGGA
droFic1 scf7180000452427:704-914 - T-GCCT----TG---------------GATATACG---------AATTCAAC-GCACGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATA-AAAAA-----A-----CGGCAAAAA-CTAT---AGCTGATCGAGGGA-AGTAT--TATCGGA
droKik1 scf7180000302401:71453-71651 - ATG------------------------------T------------------------GTAT----------------ATGTAAAT---------ATATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCA-AAAAAA-------GTAAGATAAAAAGCAAG---AGCTGCGAGAGGGCAAGTACTCTATTGGA
droAna3 scaffold_12916:2379419-2379607 + dan-mir-125 Known_mirbase A-GCCGACATTC---------------GCCAAGCA---------AATGCATCCGCCGGGCGC----------------ATGTAA-----------ATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATA-CAAAAAAGATA-----AAGCAAA---------------------------------------
droBip1 scf7180000396430:325114-325298 + T-C--GGCATTC---------------GCCAAGCA---------AATGCATCCGCCGGGCGC----------------ATGTAA-----------ATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATA-AAAAAG--ATA-----AAGCAAA---------------------------------------
dp5 4_group3:3635964-3636146 + dps-mir-125 Known_mirbase C-GTCC----GA----------------GTATCCA---------A--GTATC---CGAGTAG----------------TCCCGA-----------GTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TACAAAAAA---AA-----AAGCAAAAA-AGAA---A----------------------------
droPer2 scaffold_1:5116554-5116729 + dpe-mir-125-1 Known_mirbase A-GTAT----C----------------------CA---------A--GTATC---CGAGTAG----------------TCCCGA-----------GTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAT-ACAAAAA----AA-----AAGCAAAAA-AGAA---A----------------------------
droWil2 scf2_1100000004521:11623303-11623456 + dwi-mir-125 Known_mirbase ----------------------------------A---------TATGATAC---AGTTCAA----------------ATAATA-----------TTATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCA-AAAA----------------------------------------------------------
droVir3 scaffold_12963:18451596-18451789 + dvi-mir-125 Known_mirbase A-ATTT----T-------------------------------------CA-----CTCGCATATATATATTTATATATATGTATATATATATTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-ACAAA-----A-----AAACAAAAA-CAA---------------------------------
droMoj3 scaffold_6500:6184266-6184442 - dmo-mir-125 Known_mirbase T-ATTA----TC---------------GATCTGTAATCATAAGAAATTCA-----CTTGCAT----------------AT-TAC-----------ACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAG----TA---------------------------------------------------
droGri2 scaffold_3792:410-604 + dgr-mir-125-2 Known_mirbase G-GCA------AATATATATCATAATCGATCT-----CATATGAAATTCA-----C-TGCAT----------------ATTTAC-----------ACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA-----------AAACAAAAA-CAA---------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
T-GCCT----TA---------------AGTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAAA-CAAA---ATTACTTTGAAGGC-ACGAG--TATCGGASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................221130501.00130501668891210492327615032618
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21129445.00294451399832179231612722225
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................20114637.001463786505920292102462642
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2115582.00558255120404611
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2312020.002020128101040266072
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................2011247.001247120201002123
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................221919.009191861780216330
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191768.0076826402409331140
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201746.007462100600104660
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................211713.0071311601303192650
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................241383.003832750803970
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................201359.0035922200051320
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................211226.002261720800460
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231218.002181790802290
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................191204.0020436015021510
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................221187.0018719014002260
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191156.001565902001382
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................231147.001475601105750
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................221124.00124123000010
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................221116.00116430904600
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................191113.001133708011570
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................251102.00102610800330
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................181100.0010020601865
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23169.006969000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24167.0067300403300
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21163.0063320500260
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23160.00601902011253
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................26156.0056320401190
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18153.00531300011029
...............................................................................................................................................CTGAGACCCTAACTTGT.................................................................................................................................17146.004600000046
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23143.0043210400180
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18137.0037170103160
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................22135.0035901015100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................27131.0031200001100
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18129.002980003180
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................21126.002615010280
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................21123.002323000000
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18123.002323000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................20122.002220204140
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22119.001916000030
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................22118.00187000470
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21118.001818000000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20117.001715000110
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20116.001600000151
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................22116.001616000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................22115.001500001140
.............................................................................................................................................CCCTGAGACCCTAACTTGA.................................................................................................................................19115.001515000000
............................................................................................................................................TCCCTGAGACCCTAACTTTGA................................................................................................................................21115.001514000010
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23114.001414000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24113.00132000650
............................................................................................................................................TCCCTGAGACCCTAACTTGTTT...............................................................................................................................22113.001312010000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................20112.00124020033
.......................................................................................................................................................................AATACCAGTTTCACAAGTTTTGATCTCCGG............................................................................................30111.001100000011
............................................................................................................................................TCCCTGAGACCCTAACTGA..................................................................................................................................19210.502140000170
................................................................................................................................................TGAGACCCTAACTTGT.................................................................................................................................16110.001000000010
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2419.0099000000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................2118.0083010040
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2218.0088000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGG............................................................................................1818.0080000080
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTA..............................................................................................................................2318.0085020100
............................................................................................................................................TCCCTGAGACCCTAACTTTG.................................................................................................................................2018.0086000020
............................................................................................................................................TCCCTGAGACCCTAACTTA..................................................................................................................................1917.0077000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................2316.0065010000
droYak3
T-GCCT----TA---------------AGTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAAA-AGAA---ATTACTTTAAAGGC-ACGAC--TATCGGASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................22180641.008064114505678935882071364243801269
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21114878.0014878361101558117022574700007
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2114901.004901104882003600000
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................2013102.0031024094301658115433000273
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2311690.0016902671176007316760010
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................201898.008984892001100000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................221526.0052633216100131910000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................241498.0049830715700112300000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................211417.00417196702027453904340
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................221402.00402039003532710000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................221384.003843159005416350000
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201369.00369322300498860000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231259.00259991381021810000
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191197.00197538420203510002
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................251193.0019315925003510000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................221119.001190119000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................231107.0010774900311100000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23180.0080080000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................19179.0079079000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................26174.00744824000200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23172.00722530061100000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................22170.00705311000240000
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................19161.006113000131700000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................27161.00613623002000000
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19154.0054246001500000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACC.............................................................................................................................24138.0038380000000000
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18134.0034723000400000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24133.0033520002600000
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................20128.0028125000110000
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21126.0026050091200000
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18120.0020015000300002
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23118.0018115000110000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24117.0017111000410000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22116.0016511000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................20116.001684000040000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23116.0016115000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20115.001540101900000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21114.0014014000000000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................22114.0014014000000000
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18112.001202001810000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18110.001017000200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................21110.001002003500000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................21110.001017000200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................2119.00901005300000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................2219.00972000000000
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................2219.00913001220000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTA..............................................................................................................................2318.00805000300000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAC.........................................................................................2117.00760000100000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................2017.00740000300000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................2217.00750000110000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACG.............................................................................................................................2417.00752000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTTC...............................................................................................................................2217.00700000700000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................2116.00641000100000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................2016.00606000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................2116.00633000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGGA..............................................................................................................................2316.00605000010000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................2316.00605000100000
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................1815.00505000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGCA..............................................................................................................................2315.00500003200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAC.............................................................................................................................2415.00540000100000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTG................................................................................................................................2315.00505000000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGT...........................................................................................2214.00430000100000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2214.00404000000000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2414.00404000000000
..................................................AC---CGGGCAT----------------ATGTAA-----------ATATTGGCA.........................................................................................................................................................................................2414.00440000000000
droSec2
T-GCCT--AATG---------------CCTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA---TA-----AGGCAAAGA-CGAA---TTCTCTTGCGAGGC-ACAAG--TAGCGGASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................22164150.00641503416926093727335
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21116785.0016785712047179187
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................20113276.00132765863531812319
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2112895.00289528694022
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................2211339.0013391607801101
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2311109.001109636430430
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191644.0064418510458
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................201599.00599594005
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................211485.00485952140176
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201356.0035695180243
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................241275.002751844087
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................201197.001971096082
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231140.001401163021
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................211129.00129993027
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................191127.00127253099
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18197.009701096
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23197.0097434050
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23167.00672518024
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24158.0058163039
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................26154.0054431010
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................22154.0054174033
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................25150.0050361013
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................19149.004942007
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................22148.004848000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................22144.0044101033
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19136.0036211104
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23132.003231001
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................22130.003081408
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................27127.002719206
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18127.0027112014
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20124.002412021
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................21123.002391013
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21122.002290013
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................23122.002216015
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23122.0022101011
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................21121.002135013
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22116.001615001
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18116.001616000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21116.001615001
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18116.001611104
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................21115.001515000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23114.001414000
.............................................................................................................................................CCCTGAGACCCTAACTTGA.................................................................................................................................19114.001414000
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................22114.00146206
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20114.001411300
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18113.00137006
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................22113.00136502
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................20111.00115006
............................................................................................................................................TCCCTGAGACCCTAACTGA..................................................................................................................................1929.001823013
............................................................................................................................................TCCCTGAGACCCTAACTTTGA................................................................................................................................2129.001810008
............................................................................................................................................TCCCTGAGACCCTAACTTGTTT...............................................................................................................................2219.0099000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................2218.0088000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................2418.0085102
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................2217.0073103
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTA..............................................................................................................................2317.0073103
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................2016.0060006
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2416.0064002
..............................................................................................................................................CCTGAGACCCTAACTTGTGT...............................................................................................................................2016.0060006
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................2115.0053002
............................................................................................................................................TCCCTGAGACCCTAACTTTG.................................................................................................................................2015.0054001
............................................................................................................................................TCCCTGAGACCCTAACTTT..................................................................................................................................1914.0041003
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGT...........................................................................................2214.0040004
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGG............................................................................................2014.0041003
.............................................................................................................................................CCCTGAGACCCTAACTTGTT................................................................................................................................2013.0033000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................1913.0032001
............................................................................................................................................TCCCTGAGACCCTAACTTGACT...............................................................................................................................2213.0033000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2613.0033000
...............................................................................................................................................CTGAGACCCTAACTTGTGACTTT...........................................................................................................................2313.0033000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................2513.0033000
............................................................................................................................................TCCCTGAGACCCTAACTG...................................................................................................................................1813.0033000
............................................................................................................................................TCCCTGAGACCCTAACTTAA.................................................................................................................................2013.0032001
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2213.0033000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTT............................................................................................................................2413.0033000
droSim2
T-GCCT----AA----------------GTATGTA---------AATGCAAC---CGGGCGT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAGG-CGAA---TTCTCTTTCAAGGC-ACAAG--TATCGGASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................22186276.00862763847505877702237933599734018186561272201031477001
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21117318.00173181641194217518382882543743412545019143000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................23113704.0013704331313242953102794533002003000
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................1812848.0028486002627220023107000000
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................1912580.00258031024133455168827280013001000
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................2012570.00257016264173320138124320300630015000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................2112534.00253478023271954166142145101705873829164
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................2411820.00182011367104848277123113000004000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2311664.001664839123331800145131641101074000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................221804.00804673113360032004000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................211711.007115130616321024002000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................251504.00504341164513891616000004000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................261267.00267133801411402533000012000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................231243.00243912510142520240010041010
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................221206.002069137021411100000837014
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................201199.0019933101534800000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................211132.001321039300437000003000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................201112.00112308017159130000220016
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACC.............................................................................................................................241110.001101044110000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................271106.00106455071131417000004000
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................20196.00961820220020100023001000
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18176.0076182010018210016000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24168.0068223011001710311000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22165.00658201143613000000000
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19161.0061720000980035000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................22155.00551110190097003104000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAC.........................................................................................21146.00463610000000000000000
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................22142.0042133001455000008003
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23141.00412301000178000001000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................22138.0038152010067000016000
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................19135.0035122050375010000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGG............................................................................................18135.0035800091611000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21135.0035000290024000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................20134.00343105001312000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................22131.0031202270000000000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24130.0030145011400000005000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................22129.0029540001411000004000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACG.............................................................................................................................24128.0028253000000000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGG............................................................................................20127.0027181001700000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................19127.0027103004413001001000
............................................................................................................................................TCCCTGAGACCCTAACT....................................................................................................................................17124.0024000000120021000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAAT.......................................................................................................................30123.00230000001310000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23120.002081020531000000000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23120.0020100140140000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAC.............................................................................................................................24119.0019181000000000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................19119.001940090600000000000
............................................................................................................................................TCCCTGAGACCCTAAC.....................................................................................................................................16118.001800000071009001000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCG.............................................................................................19117.001760002900000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................22115.001540000055001000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGC...........................................................................................21115.0015132000000000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................21114.001490050000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23114.001464100020001000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21114.001421010044001001000
.................................................................................................................................................................................TCACAAGTTTTGATCTCC..............................................................................................18114.001400006800000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................20113.0013130000000000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGG...........................................................................................21113.0013121000000000000000
.................................................................................................................................................GAGACCCTAACTTGTGA...............................................................................................................................17113.0013000000210010000000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20113.001343040010000001000
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18112.001240010700000000000
...................................................................................................................................................GACCCTAACTTGTGA...............................................................................................................................15110.001000000028000000000
...............................................................................................................................................CTGAGACCCTAACTTGTGACT.............................................................................................................................2119.00942000120000000000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................1819.00961000100001000000
................................................................................................................................................TGAGACCCTAACTTGTGAC..............................................................................................................................1918.00852000100000000000
................................................................................................................................................TGAGACCCTAACTTGTG................................................................................................................................1718.00800000044000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAC.........................................................................................2318.00871000000000000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGT...........................................................................................2218.00861000001000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATC........................................................................................2217.00751000010000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGAA................................................................................................................................2117.00760010000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................2017.00770000000000000000
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................1816.00620000000004000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAA........................................................................................................................2916.00600000042000000000
..................................................................................................................................................AGACCCTAACTTGTGA...............................................................................................................................1616.00600000014001000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCC..............................................................................................1915.00500003200000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAA.........................................................................................2115.00500000021000011000
......................................................................................................................................................................................AGTTTTGATCTCCGGTAT.........................................................................................1815.00550000000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATAA.......................................................................................2315.00521000001000001000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAC..............................................................................................................................2115.00500004100000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGACT...............................................................................................................................2215.00550000000000000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTA..........................................................................................2315.00520000000000003000
.....................................................................................................................................................................................AAGTTTTGATCTCCGGTAT.........................................................................................1914.00412000100000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAATACC....................................................................................................................3314.00400000040000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCC..............................................................................................1614.00400000004000000000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................2214.00400020011000000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGG............................................................................................2114.00430000100000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAG.........................................................................................2114.00422000000000000000
............................................................................................................................................TCCCTGAGACCCTAA......................................................................................................................................1514.00400000002002000000
..............................................................................................................................................CCTGAGACCCTAACTTGTGACT.............................................................................................................................2214.00420020000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTG...........................................................................................................................2614.00440000000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTG..........................................................................................2013.00312000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2413.00310010010000000000
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTA..........................................................................................2113.00300000300000000000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................2113.00300020000000001000
..............................................................................................................................................................................GTTTCACAAGTTTTGATCTCCGGTAT.........................................................................................2613.00302010000000000000
................................................................................................................................................TGAGACCCTAACTTGTGACT.............................................................................................................................2013.00330000000000000000
...............................................................................................................................................................................TTTCACAAGTTTTGATCTCCGGTAT.........................................................................................2513.00320000100000000000
...............................................................................................................................................................................TTTCACAAGTTTTGATCTCCGG............................................................................................2213.00311000001000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAAA............................................................................................................................2513.00310000000000002000
...............................................................................................................................................CTGAGACCCTAACTTGTGAC..............................................................................................................................2013.00300000200001000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTAATA......................................................................................................................3113.00300000030000000000
.................................................................................................................................................GAGACCCTAACTTGT.................................................................................................................................1513.00300000000003000000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGAC..............................................................................................................................2413.00300002100000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................2113.00300010011000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGG...........................................................................................1912.00220000000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTT..........................................................................................2012.00200000000000002000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAG.........................................................................................2312.00211000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTTT...............................................................................................................................2212.00200010000001000000
................................................................................................................................................TGAGACCCTAACTTGTGACTT............................................................................................................................2112.00220000000000000000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2412.00200020000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTC............................................................................................................................2512.00220000000000000000
...............................................................................................................................................CTGAGACCCTAACTTGTGG...............................................................................................................................1912.00220000000000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTT..........................................................................................2212.00220000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTC...........................................................................................................................2612.00220000000000000000
...............................................................................................................................................CTGAGACCCTAACTTGTGATCC............................................................................................................................2212.00200000000000002000
dm3
T-GCCA----AA----------------GTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA----TA-----AGGCAAAAA-CGAA---TTCCCTTTCAAGGC-ACAAG--TATCGGCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................221653339.006533390000118335915351174321506923313108110022432014923960138261221798102528060514403676585774334827692513853054896582194933541073163159616200024952105472000000000000000001061001016617223912013301910310225703694756189123047463409112453757458631919509928626611484622962605678526938722807417014365702318821114155482321115751245567146565435734142022158739776282290111165208515745864588172192327533351000001334402001741816350012497595302143949514907112532541166935861963313156152800450964441885349138911100252816184827420201397416719328102511724739869123374171119081116477611249411046146981639915438194214123001950306098112299787519552970220126784209286393313310105442347297511314668524150016662763104122962637400814352548111522639617128117088126725731116188401637316152641447754248511772091334610203131670187822810221189102210845210190783292713054728809128781071883258
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................211162820.00162820000042955000020120110591722120220121422887050376198119339842951798703980715364205014719142372719525777501900032016349000000000000000001611785364200510017579097111237235185730202207501113341780112283665614725440524234263192431573143301201959401351935370268222348171041231230000054453318511650122023180000016000082079152043397254241980323112774221217457851745187195330020061982045421543300980146140000076224006000361106019137365510738591106520133710116840000010020088644661005213471976681028383001013701106302920402039830012751416417516360027689197117572478280400189126483871062330498181346657311060154250406195112001000254260143799242217232102110838
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................20146770.00467700000720000000013103304127503016853263189120121721415119194181054102534262000642714000000000000000003451400000100041353185152700352661000111153030171146411175116423305268173543810161000000000000920128961954370000024400082713470371552065521854288974617195861000002075302552302330014101161900000263412600400069331733024035446021684633000000000001812335550013803420312400000334002006320101000100142267120212207273731310021206119850645423790026113714201323243412554622164777180209171101001590142104741913521694172240906641
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................21115298.0015298000017000000020000000131110101500000038740112230459522124293000791169000000000000000001200301001000813233710620795700685737550220023483140227322121120264200505400000002100000015241218175012311416000000000002391540160115314410435121232302200000211343859190003101900000266000000000197610175342431032206542903664883002100000034150000241801940020283051215690133521000119751144802159114071489000583521091361361490284365241936368530212247603603591702861140032249544001281761868124575051100400
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2318388.0083880000395000001307003802421400000000000223201450330112620000000000000000000000003500421330000002201541911265518510423079419111703468181901493315620212097261161151101341330000041200000000542090312100000000000471513034410222186418212042393210000057585114600004303400000084000000000977213510214355966522217912410001780010016721000814403400000221000001600025000025249271927132100031683945066001740038422831132004511200017400100432821038000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................2216006.006006000010200100020660410010300000000000212500627461301312920000000000000000000000002001216210000091215588040204700443267142015118171000028386372100298411130342712300000200100000012332360103000000000002013630134113712393459040136820000275122940008017700000004010011000213225691112921410000010000002411620001343140700000041000000400021000010164113173140001575417197007001252111315140004640011760017027738372101214000202
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................2215789.00578900006000001020000000311601000000000212252253122196504966621500000000000000000000000000010000000003051225141100114102031031110200846998263124126832131455643109141600112130100000011202130015000000100102331070970178441576100000635020000101000000000000010001228121410590000010000010300720012278027100109001001500020000061934421117000091019182700330134513037118500110000000400102602010000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................2415725.0057250000123000000109006100001000322132941200101000000001001110001071012800000000000000000131022300000002140601101951001312299810501517511022579393086458431503583787100020010000000010100120220000000000002753200190032541083141220323231300000713504000030200000010000000000272787986993631541309400000000000328200024560800000220000005000200000110416010001620262343001002000210145000112000045002025370211000005
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................2013931.0039310000200000000000000039010000000000011911482919127125661018143000100000000000000000000020000000000001101480054160002003100001011440502113320536800000001010001038741010640650000000000050430301027544540186501000008949322300018111000000100000000004978394414410247291151551951290000000010028583002164660126000003210010229000580000592457182416112550002186110280780014204336413117151400062230000790012010331724912000000
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................1912911.002911000000000000002002001002000284292401010102012030001130000014630000000000000000001003000000000012008060000211001013000000040908091103012404600280000000000010000270010000000000006141703522262753095020441800000653432000201000000000000000000102123274213200000000000105910002028607000004000100200060000120001230000194118309900000202007027000010000010001031516031000000833
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................2312304.002304000051000000103101000003000110293100010000003000001311000032139068000000000000000000210700000000621550138241028307820340116401021304810031196202193231900200000000000010101800000000000000040510381162330321310570000001413341000001000000000000000002723473621252672494500004200000682000101005000003000001300030000030135230000478290040000100633300003000001200000920002000008
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................2611247.001247000021000000000000000000000002292000000010000000010000000091730000000000000000000011000000002083017060012360001021110001005130140631601811011000001004000000000004002000000000000645404010572222902905000000012370300000000000010000000000012122654354729975872000000000000300007504000002000001100040000020038000000143010000000000100000110000000000000100011000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2711213.00121300002000000000000000000000001013150100100000000000000000008210000000000000000001100200000000107101504007112520010710110007149051104180151141500000000300000001000400000000000000047480390049160131201234000006510000000010000000000000000000015772409146959287000000000002200001201000003000000000000000320000010000041310010000010002000001000000000000200000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................2511185.00118500005100000000000000000000002133251000001000000000000000001224000000000000000000010910000000008203076002077200004700000112013022011435013421180000001110000000000040000000000000004768068004330136230042100000111712000000300000060000000000160013281831124025130000000000009000099010000020010001000200001111230000002613430010000000104000000000002000100520000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................2211181.00118100001350000101010000000060000000000000010006100106110100000000000000000000000000017300000017134601331600108314063031600101130171313014217011130140000010000000000000010000000000000005349059103191120374630000001448400000500000000010010010001014510001214430000000010013160000882701800000200000020007000036082532001037161290032000101000200002000010000003522101000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................231992.00992000020000000000000000100000000000001101202200100214000001310000000000000000000000000000000100002000641200010121000080520101040403200000000000000002223706000000000000015140800630702020200000171151000808000000000000000003501654218307136635800000000000131000030100000100000170006000015162239213339000116610640042046966533200139010025180050014528110000025
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................211871.0087100008200000000210200000000000000000010100001100011000000000000000000000000000000100000000001007110000300000010000011114080301111041097157000100000000000000007000000000010000354801611212414420000001110100001000000000000000000000010000000000000000000288000053110018000004000000000010000000000000000411631300000010004210000000000000001021101000000000
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................191859.008590000000000000000000000000102151818110140030051201020020000000000000000000000000001000000000000002000001400000000000000640409516121420000000000000001020029000000000000000192601533420520115142220000029201000010000000000000000000212031019845162370000000000063130004764014000001500000020005000033001112000051716292700510000103128000031000072002023096414000002
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATC.............................................................................................................................241825.008250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301000000100000534284000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................211796.007960000100000100010000000120000000000000101020200000110000022251000000000000000000200300010000312330187260028243630771616011021704101001611002000000000000000002008000000000000000191301211112922418215122000026201010010000000000110300000024158441264720000000000028000013120800000200000110006000043907320390001939880010003900020300104000000100201100010000001
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................191771.007710000000000000000000031013000000000001010004100000011100000000000000000000000000002000000001041012600166001100510001000000000001001000000000000000413910911220540000000000017040031301102030000007737200040100000001000000000101551111000000000000000001100008404000001000000200080000751114443221000114172432350012100028187539005819010002500103140210000004
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................221747.00747000000000000000000000011000020000000000101011010017100004820000000000000000000101000000000010000000310000000000000002100010201000000000000000000102314030200000000000560600241724218000000234210000000000003000000000013012294111791917000000000003200005401100001000000300020000031762753433300051517717800320210414123132200491700007103210904131241016100200
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................231716.00716000020000010000002000110000000000000100000511000012000000000000000000000000000011000000001061033700313020030220000072167050742115211800010000000000011101130000000000000002634092112831601732650000042408100060400000001000000000491142147612121400001630000041200001210041000010000000000200002367374500008622900200003003526000120000011005052230104000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................211514.005140000233010020001250110000000000000000000010000000000000000000000000000000000000000400000000004001150013213013044001002302810102021407015600010000000000000000400000000000000031410243451472008149000000351000000101000000000000000001321100210100000000000036000021606000005000000000000000010000000000040240000000000000000010000000000100500000000001
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................181499.0049900000000000000000000010000001840232000000000010000000000030000000000000000000110020000000000100304001021000003000000012100002017644006230000000000000000100000000000000014506407240211110120000017020000000130000000000000000003300100000000000000000100000000000001000000100000000000000000000010010000000000000000000000002300100141010400000150
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................241494.00494000040000000000000000100000000000000000000010000001000000000000000000000000010002300000001041031690008231200014300010010010090511206600000000000000000200500000000000000023310181018130130190280000004520300000000000000000000000000023102652677000010000002200003002000001000000000000000000000110000155360020010000000300000000002100100400000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................201432.0043200000000000000000000100000020000000000000010011000000000110000000000000000001010000000001011202100011000040210000000100000010200200000000000000000100100000000000000036060232310371220000051420000101000000000000000001200842442270000000000021000002011000000000107001560000018633535116000291320001100916031812000140000322100601810013100000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................211349.003490000400000000058000000010000000000000000000000000010000000000000000000000000000010000000000300100000002000000000002076050409140511000000000000000000014000000000000000202901951821402744000008500000000020000000000000000000010000111000000000000290000111208000001000000000000000010001000000012690001000000000000000000000000100110000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................201343.003430000300000200000000000000000000000000000000000000000000000000000000000000000000010000000060930981000662110000250000280000000010001200000000000000000001100000000000000031305300243321831200000120110001000000001000000000012016913149101310000000000001210000100000001000000000000000010120110000214460000000000000000000000002000001501100000201
............................................................................................................................................TCCCTGAGACCCTAACTTGTTC...............................................................................................................................221303.00303000000000000000000000000000000000000100006100000010000000000000000000000000000000000000000000010100000000000000000031510000120823487400000000000000000000000000000000000017405000000000000000010000000000000000000000000000000000000000000200000010000012807000000000000000000000000000000000000140000000000100000000000000000000000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................221287.00287000000000000000000000110000000000000010001001100011100000000000000000000000000000000000010010000000010000000000000003001003300000000000000000000000000000000000000000210120005120102200000000000000000000000000000000010007659254710000010000000000000000000002000001400017000014412070110002310212000001111111600007520000421600701240303000100
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................221251.0025100000000000000000000000100000000000000000000100002200000100000000000000000000000000000000001001020020000020000000000110000000001000000000000000000010000010000000000074050013010101100000100100001000000002000000000001002175718101817000100000001100000100000001000001000060000000459040000523020040023800101100033000002700101211301000007
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................201245.002450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000020000000030104000000000000000000001000000000000000107030052011301232600000520010000000000000000010000000000001000000000000000007000045010000010000000000000002110030000004654100010000000000000000000010000002000000000011
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................181221.0022100000000000000000000000000000000000202000000000010020000000000000000000000000000100000000000000000000000000000000000200001000001000000000000000000001200000000000000000001000000110000000210100001000000000000000000001130011011000000000000290000312000000090000010000200002701210120000010322600100002002011000010000010002006720212000000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................181202.0020200000000000000000000000600001114501010000000000000000000000000000000000000000000000000000000000000000020000000000000010000000000000000000000000001120231000000000000000250000051151101000000200010000000000000000000000002110000000000000000000020000010000000000000000001000011001000000074314360042010100210400030000001000001200200000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................201175.001750000100000001032000000000001100000000000000000100010000052000000000000000000000010000000000300011000122000000300000200101011400000000000000000000000001000000000000000151107123611114581000006001000000000000000000000000000100010000000000000000400001401000001000000000000000110010000000112220000000000010000010000000000000100001000003
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................181161.001610000000000000001000012000001000000002000010000001000000000000000000000000000000000000000010010102006710100000000000001000001100010000000001000000120206000000000000000300341510118010000000012000000000100000000000000000443500000000000020000001000001100000000000000000000000060112020000120320000001200000000003000001000000000000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................211159.00159000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000008000001000000000300000102002000000000000000000002000000000000000350100220101001000000430000000000000000000000000000002200540200000000000000000210000000200000110003000003020511000026113400000110106134000010000013000011071110000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................241155.00155000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001300000000000000100000110000000000000000000000000000000000000000024010010000213000000500100000000000000000000000000009247258500000000000010000100200000000000010004000001312114040000311350021000010302000031000000200200100010000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGCA..............................................................................................................................231149.0014900000000000000000000000000000000000000000000000010100000000000000000000000000000000000000100001020010300000000000010182000001022133180000001000000000000010000000000000005707000001000100000000000000000000000000000000000000010000000000000000001000003100000000000000000010000000010000000000010000000000200000000000000000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................201148.00148000000000000001000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000003000000001020000000000000000000004000000000000000880510600104080000002000100000000000000000100000002000000000000000000000071000011010000000000000000000000201000000003514300100000000012000000000000000002200011000003
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................231145.00145000020000000000000000000000000000000000001000000000000000000000000000000000000000000000000050030500102000000100000204200010500013000000000000000000000000000000000000312050014051601100000010100000000000000000000000000000006211521000000000001400004201000004000000000010000000000000000031410010000100110000000000000000000000000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191132.0013200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000024000000010001000000200000000000000000000000000001000000000000000000000120000020000000100000000000000001100000000000002000000000000010000000000000000060000000000103
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAA.........................................................................................211109.001090000000000000000000000000000000000000000000000000100000000000000000000000000000010000000100100000000400000003000000000000000010000000000000000000000010000000000000001304000100041300000010000000001000000000000000000000100210100000010000000000000000000000000000000800002731015080002100110010002211030100001000000400002310000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................191106.0010600000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000100200000000000000031000010000210000000001000000000000000000000000010000010011000000000000020000010000000000000000008000016051191300024110000000000210500000120000001300300310010000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTA.........................................................................................................................28197.009700000000000000000000000000000000000000000000000000000000333170000000000000000000001000000000000000000000000000000000000001000100100000000000000000000000000000000000000110000100000010000000000000000000000000000000000000034021222000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
droEug1
T-GCCT----TG---------------GTTATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATG-AAAAA----TAAACAAAGGCAAAAA-CAAA---AGCTGATGGAGGGC-AGCAAT-AAATGGASizeHit CountTotal NormTotal
No Reads
droBia1
T-GCCT----TG---------------GACTTTTG---------AATGCATC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA-------CAAAGGCAAGAC-CAAA---AGCTGATCGAGAGC-GGTTT--TATCAAASizeHit CountTotal NormTotal
No Reads
droTak1
T-GCCT----TG---------------GACTTTTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA-------CAAAGGCAAAAA-CCAA---AGCTAACCATGGGC-AGTAT--TATCGGASizeHit CountTotal NormTotal
No Reads
droEle1
T-GCCT----TG---------------GATATGTA---------AATGCAAC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA-G-AAAACCCAGGCAAAAA-CAATAACAACTGATCGACGGT-AGTAA--AATCGGASizeHit CountTotal NormTotal
No Reads
droRho1
A-GCCT----TG---------------GAAATGTA---------AATGCATC---CGGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAAA------ACAAAGGCAAAAG-CAAA---AACTGATCGAGAAC-AGTAT--TATTGGASizeHit CountTotal NormTotal
No Reads
droFic1
T-GCCT----TG---------------GATATACG---------AATTCAAC-GCACGGCAT----------------ATGTAA-----------ATATTGGCATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATA-AAAAA-----A-----CGGCAAAAA-CTAT---AGCTGATCGAGGGA-AGTAT--TATCGGASizeHit CountTotal NormTotal
No Reads
droKik1
ATG------------------------------T------------------------GTAT----------------ATGTAAAT---------ATATTGGCATTGATAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGCA-AAAAAA-------GTAAGATAAAAAGCAAG---AGCTGCGAGAGGGCAAGTACTCTATTGGASizeHit CountTotal NormTotal
No Reads
droAna3
A-GCCGACATTC---------------GCCAAGCA---------AATGCATCCGCCGGGCGC----------------ATGTAA-----------ATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATA-CAAAAAAGATA-----AAGCAAA---------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................22187820.008782069230213661249111463
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21124562.0024562194663115231823387
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................20113887.00138872052007773811020
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2115840.0058405825002112
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................2011731.001731173000100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2311524.001524132240661131
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................2211057.00105726800854700
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191558.005584221060075
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................241435.004353560018160
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201326.003262680045013
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................221238.00238217006015
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231200.00200179007113
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................211178.001785100344152
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191174.0017416800006
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................221122.0012212200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................221105.0010530006807
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................191105.0010587001602
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................201105.0010582001022
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23191.009163005023
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................25183.008369003011
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19181.00817300116
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21172.007218008046
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23163.00636300000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................26161.00615400007
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21147.004714003129
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18139.00393700002
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23136.003614001039
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................27132.00322910101
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24130.00301900317
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18129.002910004015
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18127.00272400102
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18127.00271800225
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18125.00252500000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................22124.0024800268
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23123.00232300000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................21122.00225003113
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23121.00211500303
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20120.00200305012
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................23117.00174000013
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................22116.00161600000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22115.00151500000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21115.00151500000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................21110.00101000000
.............................................................................................................................................CCCTGAGACCCTAACTTGA.................................................................................................................................1919.009900000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................2418.008400202
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................2117.007100105
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTT............................................................................................................................2417.007700000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................2516.006600000
............................................................................................................................................TCCCTGAGACCCTAACTTGTCT...............................................................................................................................2216.006000213
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................2016.006200013
............................................................................................................................................TCCCTGAGACCCTAACTTGTTT...............................................................................................................................2216.006100104
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................2015.005500000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2415.005500000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................2015.005100400
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................2115.005500000
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................2215.005400010
............................................................................................................................................TCCCTGAGACCCTAACTGA..................................................................................................................................1924.509600003
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2414.004400000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................2214.004100300
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2613.003300000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTA..............................................................................................................................2313.003200100
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................1913.003200001
droBip1
T-C--GGCATTC---------------GCCAAGCA---------AATGCATCCGCCGGGCGC----------------ATGTAA-----------ATATTGGTATT---GGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATA-AAAAAG--ATA-----AAGCAAA---------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
C-GTCC----GA----------------GTATCCA---------A--GTATC---CGAGTAG----------------TCCCGA-----------GTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTA-TACAAAAAA---AA-----AAGCAAAAA-AGAA---A----------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................221102870.001028708642721529352137550102310749139
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21127961.002796141571819694022462398492
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2115340.00534015263072040000
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................2013864.0038640177819080109184011
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2311871.00187111021177006410130
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................2011471.00147101450019011000
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191958.00958144504790280230
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................221771.0077103480281012022000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................241484.0048403250148091010
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201371.00371025006704410000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231362.0036202120147030000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................221253.0025302301760459000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................211245.0024511700903028007
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191160.00160015703000000
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................191133.001330107014083001
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................201128.00128030118070000
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................211109.00109070100020000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................221103.00103010002000100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................22196.0096053030085000
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................19190.00900570150144000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23168.0068046015052000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................25168.006805906021000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23165.006505906000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23157.005704203028020
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................26154.0054042011001000
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21150.0050013029062000
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18146.004604402000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................27144.004403904010000
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18142.004203901000110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23140.004003901000000
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................20139.0039018018020100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACC.............................................................................................................................24136.003600036000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21136.003603501000000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18136.0036024010020000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22132.003202704010000
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18127.002702401020000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24122.002208010000040
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23122.002201502050000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................22120.002001504010000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20119.001901800000001
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................21117.001703010031000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24115.001501500000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................23115.001501201020000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................22114.001401102010000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................22113.001301102000000
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18112.00120501060000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................20111.00110900010001
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................2219.0090701001000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................2119.0090504000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTTC...............................................................................................................................2218.0080006020000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................2117.0070700000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2217.0070700000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................2116.0060600000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTA..............................................................................................................................2316.0060204000000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2416.0060600000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................2215.0050301001000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAC.........................................................................................2115.0050104000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGC...............................................................................................................................2115.0050500000000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTG................................................................................................................................2315.0050401000000
............................................................................................................................................TCCCTGAGACCCTAACTTT..................................................................................................................................1914.0040300010000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTT............................................................................................................................2414.0040400000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGCA..............................................................................................................................2314.0040003010000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................1914.0041100020000
..............................................................................................................................................CCTGAGACCCTAACTTGTGT...............................................................................................................................2013.0030300000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTA................................................................................................................................2013.0030201000000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTA..........................................................................................1913.0030300000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAAA............................................................................................................................2513.0030001000020
............................................................................................................................................TCCCTGAGACCCTAACTTTGA................................................................................................................................2123.0060303000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2413.0030002000010
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAAA.............................................................................................................................2313.0030300000000
droPer2
A-GTAT----C----------------------CA---------A--GTATC---CGAGTAG----------------TCCCGA-----------GTATTGGTATG---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAT-ACAAAAA----AA-----AAGCAAAAA-AGAA---A----------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................22310471.3331414199292896611956560
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................2132249.6767490222202089235286
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................203857.332572020301017129755
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................213281.00843082701060
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................233125.0037501730901075
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................223116.333490440952019
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................20372.00216046094760
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................22367.002010100611300
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................20359.3317801770100
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................21342.331270200236321
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................19335.67107031034420
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................24327.6783048013220
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................22321.336403407221
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................19314.674407022150
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................23314.334322803100
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19314.0042013014105
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23312.33370904186
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................1936.67200200000
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................2036.67200150122
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................1836.3319010990
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................2335.6717050390
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................2535.67170140210
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................2135.33160003130
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................2034.6714000680
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................2634.67140110210
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................1834.0012090210
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2333.67110110000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................2233.33100100000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................2133.3310010360
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................2432.678010043
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................2432.337020320
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................2332.337070000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................1832.337020122
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................2132.337030220
............................................................................................................................................TCCCTGAGACCCTAACTTGTTC...............................................................................................................................2232.006000150
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2732.006040110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................2332.006010131
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................2031.675020030
..............................................................................................................................................CCTGAGACCCTAACTTGTGT...............................................................................................................................2031.334000130
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2431.334030010
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................2031.334000130
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................2331.334000112
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................1831.003010110
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................2231.003010002
.............................................................................................................................................CCCTGAGACCCTAACTTGA.................................................................................................................................1931.003030000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................2031.003030000
droWil2
----------------------------------A---------TATGATAC---AGTTCAA----------------ATAATA-----------TTATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCA-AAAA----------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................22168643.0068643559342638126938718756
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21116907.00169079528575256337091
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................2019209.0092099383073178196
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2113633.0036331235860134
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2312633.002633115411161417332
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................2111648.00164812661252311223
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................2411049.0010498211831044
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................221938.00938887340017
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................201765.0076577460012
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................221608.00608710751488
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231608.006084511391017
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191555.0055526714820138
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................251418.00418357510010
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201406.0040621173125195
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................221214.00214188141011
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................231210.00210170222016
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................261196.0019615635005
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................191144.001447966134
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................191127.001278412175
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................201125.001250634256
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................271118.0011888190011
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191110.001101900019
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................22195.0095192002
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24186.0086233211119
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18179.00792845006
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18171.0071141065
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................21163.0063542106
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23159.00593270029
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................22150.00501160132
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23146.0046046000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................20145.0045364005
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21144.00443130028
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................22141.0041314006
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACC.............................................................................................................................24139.0039372000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAC.........................................................................................21136.0036350001
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18129.00290180011
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23124.0024910005
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18123.0023081014
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21123.0023191012
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................22123.0023175001
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23118.0018215010
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22117.0017214100
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20117.0017314000
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20116.0016320011
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................22115.0015113001
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAC.............................................................................................................................24113.0013120010
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18113.0013013000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................21112.001233006
...............................................................................................................................................................................TTTCACAAGTTTTGATCTCCGGTAT.........................................................................................25111.001192000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................21110.001016111
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24110.0010100000
..............................................................................................................................................CCTGAGACCCTAACTTGTGACT.............................................................................................................................2219.00932004
...............................................................................................................................................................................TTTCACAAGTTTTGATCTCCGGT...........................................................................................2319.00990000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACG.............................................................................................................................2418.00880000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2417.00722003
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATC........................................................................................2217.00741101
...................................................................................................................................................................................ACAAGTTTTGATCTCCGG............................................................................................1817.00751001
............................................................................................................................................TCCCTGAGACCCTAACTGA..................................................................................................................................1917.00703004
................................................................................................................................................TGAGACCCTAACTTGTGAA..............................................................................................................................1916.00633000
.......................................................................................................................GCAAATGTTTGTATGGCTGATT....................................................................................................................................................2216.00631002
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTA.........................................................................................................................2816.00642000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................2016.00650001
.....................................................................................................................................................................................AAGTTTTGATCTCCGGTAT.........................................................................................1916.00613002
............................................................................................................................................TCCCTGAGACCCTAACTG...................................................................................................................................1816.00601005
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGC...........................................................................................2116.00660000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2215.00505000
............................................................................................................................................TCCCTGAGACCCTAACTTGTCC...............................................................................................................................2215.00511003
.............................................................................................................................................CCCTGAGACCCTAACTTGA.................................................................................................................................1915.00505000
............................................................................................................................................TCCCTGAGACCCTAACTTGACT...............................................................................................................................2215.00550000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTG...........................................................................................................................2615.00550000
...............................................................................................................................................CTGAGACCCTAACTTGTGACT.............................................................................................................................2115.00541000
......................................................................................................................TGCAAATGTTTGTATGGCTGAT.....................................................................................................................................................2215.00541000
......................................................................................................................TGCAAATGTTTGTATGGCTGA......................................................................................................................................................2115.00510004
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGG............................................................................................2014.00431000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................2214.00404000
............................................................................................................................................TCCCTGAGACCCTAACTTGAA................................................................................................................................2114.00412001
............................................................................................................................................TCCCTGAGACCCTAACTTTG.................................................................................................................................2014.00403001
............................................................................................................................................TCCCTGAGACCCTAACTTT..................................................................................................................................1914.00404000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATCC.......................................................................................2314.00430001
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................2114.00404000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................2514.00404000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTT............................................................................................................................2414.00404000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................2114.00422000
............................................................................................................................................TCCCTGAGACCCTAACTGT..................................................................................................................................1914.00400004
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTG............................................................................................................................2514.00431000
............................................................................................................................................TCCCTGAGACCCTAACTTGGA................................................................................................................................2113.00302001
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGT...........................................................................................2213.00330000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAG.........................................................................................2113.00330000
.............................................................................................................................................................................AGTTTCACAAGTTTTGATCTCCGGTAT.........................................................................................2713.00330000
..............................................................................................................................................CCTGAGACCCTAACTTGA.................................................................................................................................1813.00300003
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2413.00303000
............................................................................................................................................TCCCTGAGACCCTAACTTTGA................................................................................................................................2123.00603003
................................................................................................................................................TGAGACCCTAACTTGTGAC..............................................................................................................................1913.00321000
............................................................................................................................................TCCCTGAGACCCTAACTGTG.................................................................................................................................2022.50502003
.................................................................................................................................................................................TCACAAGTTTTGATCTCC..............................................................................................1812.00220000
droVir3
A-ATTT----T-------------------------------------CA-----CTCGCATATATATATTTATATATATGTATATATATATTACACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-ACAAA-----A-----AAACAAAAA-CAA---------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................221238775.002387757488025189422340194142151022170515011119178924940761026211142483332121511911921619216821662527203615226150627021196043027571925638631259300000000000000011781710928152615942569528247108994764958510119625881188282
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21134274.003427413528713259229144994145311000283812085101154118661813911316254513016015688180913586311157014530022315100000000000000000119123369326348511152838570397774118618998131
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................20111405.00114051340136502516148219301942400073740319248984445123412616925231323019352421258483124200004118900000000000000000380015021632402011396141325141916
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2315774.00577411813298314162126101041023186305225134563624136221620202662041283393421224125000000000000000000340079220151658623944723746646314117108118140
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2114778.00477807459600100000000111236922191804061151971802000011000000000000000003009103000100001000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................2112266.00226623829202126551130000643428383816342943341916312774704011203301011454000000000000000005004663461100023117312415418910600000
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................2011249.0012491312230000000000031011102200000031500000000000000000000000001000000000010000000000
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................2011156.001156332120310231800008234153340231877467181967817533115018000031800000000000000010600931901700027211300000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................2211038.00103818017541001132010001000001030010054120300000000000000000000010120018201100012810788287615000010
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................221955.0095543163011561551940004737304349211864610231135502752014000031800000000000000000200114801300000002005621
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191909.0090939612600035101100042288212911619173220018281318050000450000000000000000019001011120000026301511191401343
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................221664.006640070720102001000762352961207410018101121213204200009420000000000000000000094100000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................241657.006574071930010002000041211027113124335210341616923040100020000000000000000015009313231115158617131137510
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................241586.005860331000001000101710789131211902311171512314302000200000000000000000211500504637102401181053495364
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................231417.00417131150155002000017135510620101025610921177300130000218000000000000000000006122030001713101633800100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231378.0037831276800101000000221161914651925011211413621030000210000000000000000010080010001851881001132
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................191335.00335128501203110000161031313292216162742728123002000026000000000000000000005000000001101000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................221242.002424213020300000003102000213100152110000001100000000000001110100340320003228509311800000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................231218.00218003601410030000146918136523190001120941003000001000000000000000000001100210000001001202
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................191191.001910358001010000001896685030231208162000000000000000000000000030037600000000000200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................251178.0017820141200001000000164210461141401100101351105000000000000000000000001000000000032230001020
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................261156.001565615001000000001361634311120112271391401000002000000000000000001001001000032013500001
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................211149.0014900180114200100002302441055002007961206000001000000000000000000000151100000000000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191136.00136001320000000000001000100000000020000000000000000000000000000000000000000000000000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................231114.0011400910000000000033020102302001101400000000000000000000000000000000000000000000000
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................181109.0010927350010000000030232111302211363701000001000000000000000001004100000053021400000
............................................................................................................................................TCCCTGAGACCCTAACTTGTCC...............................................................................................................................22192.00920060000102000020011014442111064813070000010000000000000000000003000000000100000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................27190.009011150000000000011222200780100151241000000010000000000000000001000000000002000100001
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................22184.008400790000000000001100001100000000000000000000000000000000000000000001000000000000
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18175.0075111900000000000824113308601000131001000000000000000000000000000101000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACC.............................................................................................................................24173.00731213300010000000200000012000005221004000000000000000000000001000000000002106302100
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................20171.0071002100000010000121201045010221172100000000000000000000000000002100300000000001000
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................22158.005822500010000000311100000110002002000000020000000000000000000014021000434110300010
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18155.00550080000011000050232115300210221203000000000000000000000000009100000000000000000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18153.005300160000100000041343005100000471100000000000000000000000000002000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAAA............................................................................................................................25151.005100100000000000000111013000001102000000000000000000000000000000001740000000156411
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23149.004950150010020000020011001010000230200000000000000000000000000003100000010000005120
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21143.004300500000000000010601272000000112030000000000000000000000010010000100000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................20140.00401010000001000020010010120001201400000001000000000000000000000000100034246100000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATC........................................................................................22137.00375230000000000000000011000000320001000004000000000000000000000000000020533200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21134.00340220000000000025010111300001321200000000000000000000000002003000000000000100001
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20133.003303000100010000000000002000000001000000000000000000000000000025000000000000000000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24131.00311510000000000000100021200020110200000000000000000000000000000030000043001100000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................22127.00271220000000000000000100000100110400000000000000000000000000000000100003415000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................22125.00250020000001000000000100000000000000000000000000000000000000000100000018333200000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................21124.00240030000000000002012204300000110200000000000000000000000000002000000000100000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21122.002200210000000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAC.............................................................................................................................24121.00216300000000000001010010000000000000000000000000000000000000000000011004102000000
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................22121.002100190000000000000001000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23121.002101140000000000010110000000000000001000000000000000000000000000000000010000000100
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................21120.00200530010000000010000101000000101002000000000000000000000000000200000010010000000
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18119.001900180000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................24119.001900140000000000010011001000000010000000000000000000000000000000000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................24119.00190020000000000001131100000000110300000000000000000000000000000000001010200000010
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATCC.......................................................................................23118.00184000000000000010001030000000000100000003000000000000000000000000000020003000000
............................................................................................................................................TCCCTGAGACCCTAACT....................................................................................................................................17117.00170000000000000000000000000000000000000000000000000000000005000001201000000001232
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATC.............................................................................................................................24117.00170110000000000000000010000000430401000000000000000000000000000000000000020000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................23117.00170030000000000011020010100000310100000001000000000000000000002000000000000000000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20113.00130120005000000000000001000000000100000001000000000000000000000000000000011000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGCA..............................................................................................................................23113.00130000001000000010010121300000000000000002000000000000000000001000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................20112.00120410000000000000010001000000000000000000000000000000000000004000001000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................19112.00120010100000000010000100001000000001000000000000000000000000001000000002020100000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................22110.00100070000000000000000000200000000100000000000000000000000000000000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTTC...............................................................................................................................22110.00100000000000000000000060000000000100000000000000000000000000003000000000000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTATT........................................................................................2418.0080010000000000000010000000000011001000001000000000000000000000000000000011000000
..............................................................................................................................................CCTGAGACCCTAACTTGTGACT.............................................................................................................................2218.0080010000000000000001002000000000001000010000000000000000000000000000000200000000
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTG................................................................................................................................2317.0070030000000000000000000000000011200000000000000000000000000000000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTTC.........................................................................................................................2817.0071010000000000000100000000000021100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AAGTTTTGATCTCCGGTAT.........................................................................................1917.0070000000000000000000000000000010000000000000000000000000000000040000000020000000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAAA.............................................................................................................................2317.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGG............................................................................................1817.0070100010000000000000000010000000000000000000000000000000000000000000010111000000
............................................................................................................................................TCCCTGAGACCCTAAC.....................................................................................................................................1617.0070000000000000000000000000000000000000000000000000000000001000060000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGCC................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000007000000000000000000
...............................................................................................................................................CTGAGACCCTAACTTGTGAA..............................................................................................................................2016.0060000000000000010012001000000010000000000000000000000000000000000000000000000000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTA..............................................................................................................................2316.0060000000000000000001000000000100000000000000000000000000000001000001000000000110
............................................................................................................................................TCCCTGAGACCCTAACTTGTAT...............................................................................................................................2216.0060000000000000001001020000000000001000000000000000000000000001000000000000000000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAC.........................................................................................2116.0060500000000000010000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTATA........................................................................................2415.0050000000000000000000000000100000100000000000000000000000000000000001011000000000
droMoj3
T-ATTA----TC---------------GATCTGTAATCATAAGAAATTCA-----CTTGCAT----------------AT-TAC-----------ACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAG----TA---------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................221113998.0011399894327377629106111031291
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................21117250.00172501354311624190312167
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................2118246.008246824302100
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................2017427.0074271327023973615286
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2311982.0019821743079147310
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................2011211.001211121100000
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................201470.004703180559502
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................221435.0043521007215003
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................191430.0043022207912441
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................221409.004092711676217
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................211346.003461352365316104
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................221152.0015215200000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................231129.0012912002700
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................231123.0012312300000
............................................................................................................................................TCCCTGAGACCCTAACTTGTC................................................................................................................................211107.00107600182009
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................191105.0010510301100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23197.009769081703
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................24194.00947505941
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19187.00877602306
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................19176.0076420151900
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................22171.007145091601
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23157.0057230715012
............................................................................................................................................TCCCTGAGACCCTAACTTGTT................................................................................................................................21145.0045110151900
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................18142.00424101000
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................20138.00382903402
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................24137.00372207800
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................18135.00353400100
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................23131.00312703100
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................22129.00291102349
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................20128.00283071620
..............................................................................................................................................CCTGAGACCCTAACTTGT.................................................................................................................................18128.00282071900
.............................................................................................................................................CCCTGAGACCCTAACTTGTGC...............................................................................................................................21125.00252500000
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................18125.00252101201
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................25125.00252102200
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................26122.00221701400
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................21121.00212000100
............................................................................................................................................TCCCTGAGACCCTAACTTGTA................................................................................................................................21121.00215051100
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................22120.00201002107
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................18119.00191900000
............................................................................................................................................TCCCTGAGACCCTAACTTGTCC...............................................................................................................................22117.00171103300
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................22116.00161500100
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................24114.00141400000
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................20113.00131300000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................23111.0011502400
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................23110.00101000000
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................21110.0010703000
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................24110.0010700003
............................................................................................................................................TCCCTGAGACCCTAACTTGTTC...............................................................................................................................2219.009203400
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATA........................................................................................2219.009301032
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2719.009900000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGCA..............................................................................................................................2319.009105300
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................2219.009900000
............................................................................................................................................TCCCTGAGACCCTAACTTGG.................................................................................................................................2018.008203300
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATC........................................................................................2218.008000044
............................................................................................................................................TCCCTGAGACCCTAACTTTGA................................................................................................................................2117.007601000
............................................................................................................................................TCCCTGAGACCCTAACTTT..................................................................................................................................1917.007204100
.............................................................................................................................................CCCTGAGACCCTAACTTGTGG...............................................................................................................................2116.006600000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................2016.006400200
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACC.............................................................................................................................2415.005300020
............................................................................................................................................TCCCTGAGACCCTAACTTGTTT...............................................................................................................................2215.005400100
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................2215.005401000
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2214.004400000
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATC.............................................................................................................................2414.004400000
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGT...........................................................................................1914.004200200
...........................................................................................................................................TTCCCTGAGACCCTAACTTGT.................................................................................................................................2114.004400000
...............................................................................................................................................CTGAGACCCTAACTTGT.................................................................................................................................1713.003000300
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTC............................................................................................................................2513.003200010
droGri2
G-GCA------AATATATATCATAATCGATCT-----CATATGAAATTCA-----C-TGCAT----------------ATTTAC-----------ACATTGGTATT---AGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCTAACTTGTGACTTTTAATACCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTA-AAAAA-----------AAACAAAAA-CAA---------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................TCCCTGAGACCCTAACTTGTGA...............................................................................................................................2228751.001750217163339
............................................................................................................................................TCCCTGAGACCCTAACTTGTG................................................................................................................................2121514.003028296068
.............................................................................................................................................CCCTGAGACCCTAACTTGTGA...............................................................................................................................212789.50157915790
.............................................................................................................................................CCCTGAGACCCTAACTTGTG................................................................................................................................202160.503213210
............................................................................................................................................TCCCTGAGACCCTAACTTGT.................................................................................................................................202121.5024321726
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAA..............................................................................................................................232118.002362342
..............................................................................................................................................CCTGAGACCCTAACTTGTGA...............................................................................................................................20241.0082757
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTAT.........................................................................................21235.00704228
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACT.............................................................................................................................24230.5061601
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAC..............................................................................................................................23225.0050500
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAT..............................................................................................................................23221.0042420
............................................................................................................................................TCCCTGAGACCCTAACTTG..................................................................................................................................19219.5039390
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGA...............................................................................................................................23217.0034340
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTAT.........................................................................................23214.0028208
.............................................................................................................................................CCCTGAGACCCTAACTTGT.................................................................................................................................19212.5025250
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAA..............................................................................................................................22212.0024240
...............................................................................................................................................CTGAGACCCTAACTTGTGA...............................................................................................................................19210.0020200
............................................................................................................................................TCCCTGAGACCCTAACTTGTGT...............................................................................................................................2229.5019190
................................................................................................................................................TGAGACCCTAACTTGTGA...............................................................................................................................1827.5015150
..............................................................................................................................................CCTGAGACCCTAACTTGTG................................................................................................................................1926.5013130
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAG..............................................................................................................................2326.0012120
............................................................................................................................................TCCCTGAGACCCTAACTT...................................................................................................................................1826.0012120
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAC..............................................................................................................................2224.50990
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACT.............................................................................................................................2324.00880
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTAT.........................................................................................2223.50734
...............................................................................................................................................CTGAGACCCTAACTTGTG................................................................................................................................1823.50770
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTT............................................................................................................................2523.50770
.............................................................................................................................................CCCTGAGACCCTAACTTG..................................................................................................................................1823.00660
............................................................................................................................................TCCCTGAGACCCTAACTTGTGG...............................................................................................................................2223.00660
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAA.............................................................................................................................2423.00660
....................................................................................................................................................................................CAAGTTTTGATCTCCGGTAT.........................................................................................2022.50550
............................................................................................................................................TCCCTGAGACCCTAACTTGA.................................................................................................................................2022.50550
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATT........................................................................................2222.50532
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTT...........................................................................................................................2622.50550
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAT..............................................................................................................................2222.50550
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2722.00440
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTG................................................................................................................................2222.00440
................................................................................................................................................................................TTCACAAGTTTTGATCTCCGGTAT.........................................................................................2422.00413
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATG.............................................................................................................................2421.50330
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATA.............................................................................................................................2421.50330
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTA..........................................................................................2221.50330
..............................................................................................................................................CCTGAGACCCTAACTTGTGAA..............................................................................................................................2121.00220
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAC.............................................................................................................................2421.00220
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2421.00220
............................................................................................................................................TCCCTGAGACCCTAACTTGC.................................................................................................................................2020.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAACC............................................................................................................................2520.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGGA..............................................................................................................................2320.50110
...............................................................................................................................................................................TTTCACAAGTTTTGATCTCCGG............................................................................................2220.50110
...............................................................................................................................................CTGAGACCCTAACTTGTGG...............................................................................................................................1920.50110
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTATTT.......................................................................................2320.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAGAG............................................................................................................................2420.50110
................................................................................................................................................TGAGACCCTAACTTGTGAT..............................................................................................................................1920.50110
..............................................................................................................................................CCTGAGACCCTAACTTGTGAC..............................................................................................................................2120.50110
............................................................................................................................................TCCCTGAGACCCTAACTTT..................................................................................................................................1920.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGT...............................................................................................................................2120.50110
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGT...........................................................................................2120.50101
..............................................................................................................................................CCTGAGACCCTAACTTGTGACCG............................................................................................................................2320.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATCA............................................................................................................................2520.50110
...................................................................................................................................................................................ACAAGTTTTGATCTCCGGTA..........................................................................................2020.50110
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTATTT.......................................................................................2520.50110
............................................................................................................................................TCCCTGAGACCCTAACTG...................................................................................................................................1820.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAGC.............................................................................................................................2420.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACA.............................................................................................................................2420.50110
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTG................................................................................................................................2320.50110
.................................................................................................................................................................................TCACAAGTTTTGATCTCC..............................................................................................1820.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACTTTT..........................................................................................................................2620.50110
.........................................................................................................................................GATTCCCTGAGACCCTAACTTGTGA...............................................................................................................................2520.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGACA.............................................................................................................................2320.50110
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTT..........................................................................................2220.50110
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTATT........................................................................................2320.50110
...........................................................................................................................................TTCCCTGAGACCCTAACTTGTGAA..............................................................................................................................2420.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGTT..............................................................................................................................2320.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGACTTA...........................................................................................................................2620.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAAA.............................................................................................................................2320.50110
...................................................................................................................................................................................ACAAGTTTTGATCTCCGG............................................................................................1820.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAAAC............................................................................................................................2520.50110
......................................................................................................................................................................................AGTTTTGATCTCCGGTAT.........................................................................................1820.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGAGCA............................................................................................................................2520.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTGAAG.............................................................................................................................2320.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGATC.............................................................................................................................2420.50110
.................................................................................................................................................................................TCACAAGTTTTGATCTCCGGTATTG.......................................................................................2520.50110
.............................................................................................................................................CCCTGAGACCCTAACTTGTTT...............................................................................................................................2120.50110
..................................................................................................................................................................................CACAAGTTTTGATCTCCGGTATTGC......................................................................................2520.50110
............................................................................................................................................TCCCTGAGACCCTAACTTGTGC...............................................................................................................................2220.50110
..........................................................................................................................................ATTCCCTGAGACCCTAACTTGTGAG..............................................................................................................................2520.50110

Generated: 10/20/2015 at 07:38 PM