der-let-7

TAAAAACCAAACCACCTAGCAAAAAGGACTACACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGATTAAAGAATCCCAATCGAACTGCACCACTTGCT *******************************************.....((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).)).......*****************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V108 head	V107 male body	M055 female body	V060 head	GSM1528801 follicle cells	M057 embryo	V040 embryo
............................................................TGAGGTAGTAGGTTGTATAGT.................................................................................................	21	0	1	631309.00	631309	264178	234209	99504	33076	329	7	6
............................................................TGAGGTAGTAGGTTGTATAG..................................................................................................	20	0	1	206387.00	206387	78597	73822	41400	11611	953	0	4
............................................................TGAGGTAGTAGGTTGTATAGTA................................................................................................	22	0	1	136725.00	136725	49188	59777	22606	5120	25	2	7
............................................................TGAGGTAGTAGGTTGTATAGTAA...............................................................................................	23	1	1	23925.00	23925	10765	11318	1290	550	2	0	0
............................................................TGAGGTAGTAGGTTGTATA...................................................................................................	19	0	1	14106.00	14106	6746	5247	1384	488	240	0	1
............................................................TGAGGTAGTAGGTTGTATAGTT................................................................................................	22	1	1	13808.00	13808	3677	5335	4046	728	21	1	0
.............................................................GAGGTAGTAGGTTGTATAGT.................................................................................................	20	0	1	6043.00	6043	287	250	5468	30	0	8	0
............................................................TGAGGTAGTAGGTTGTATAGA.................................................................................................	21	1	1	5697.00	5697	2653	2267	544	231	1	0	1
............................................................TGAGGTAGTAGGTTGTAT....................................................................................................	18	0	1	5479.00	5479	2853	1170	810	358	288	0	0
............................................................TTAGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	5429.00	5429	2570	2393	461	4	0	0	1
............................................................TGAGGTAGTAGGTTGTATGG..................................................................................................	20	1	1	4826.00	4826	66	28	21	15	4696	0	0
............................................................TGAGGTAGTAGGTTGTATAGTAT...............................................................................................	23	1	1	3846.00	3846	1359	1961	399	127	0	0	0
............................................................TGAGGTAGTAGGTTGTGTGG..................................................................................................	20	2	1	2889.00	2889	0	0	0	0	2889	0	0
............................................................TGAGGTAGTAGGTTGTGTGGT.................................................................................................	21	2	1	2836.00	2836	1	0	0	2	2833	0	0
............................................................TGATGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	2795.00	2795	2405	135	245	10	0	0	0
............................................................TGAGGTAGTAGGTTGTATAA..................................................................................................	20	1	1	2794.00	2794	1606	943	135	110	0	0	0
............................................................TGAGGGAGTAGGTTGTATAGT.................................................................................................	21	1	1	2722.00	2722	683	1036	639	363	1	0	0
............................................................TGAGGTAGTATGTTGTATAGT.................................................................................................	21	1	1	2474.00	2474	2025	270	158	21	0	0	0
............................................................TGAGGCAGTAGGTTGTATAGT.................................................................................................	21	1	1	2318.00	2318	697	1027	479	115	0	0	0
............................................................TGAGGTAGTAGGTTGTATGGT.................................................................................................	21	1	1	2284.00	2284	215	85	52	56	1876	0	0
.............................................................GAGGTAGTAGGTTGTATAG..................................................................................................	19	0	1	2184.00	2184	74	79	2016	12	3	0	0
............................................................TGAGGTAGTAGGTTGTATAGTAAA..............................................................................................	24	2	1	2015.00	2015	988	896	96	35	0	0	0
............................................................TGAGGTAGTAGTTTGTATAGT.................................................................................................	21	1	1	1713.00	1713	723	283	678	27	1	0	1
............................................................TGAGGTAGTAGGTTGTGTGGTT................................................................................................	22	3	1	1671.00	1671	0	0	0	0	1671	0	0
............................................................TTAGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	1662.00	1662	794	682	181	4	1	0	0
............................................................TGAGGTAGTAGGTTGTATT...................................................................................................	19	1	1	1661.00	1661	600	695	312	54	0	0	0
............................................................TGAGGTAGTAGGTTGTATATT.................................................................................................	21	1	1	1632.00	1632	620	87	221	704	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGG.................................................................................................	21	1	1	1553.00	1553	55	42	1418	38	0	0	0
.............................................................GAGGTAGTAGGTTGTATAGTA................................................................................................	21	0	1	1489.00	1489	62	95	1323	9	0	0	0
............................................................TTAGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	1219.00	1219	476	617	124	1	0	1	0
............................................................TGGGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	1178.00	1178	481	463	175	59	0	0	0
............................................................TGAGGTAGTAGGTTGTATAT..................................................................................................	20	1	1	1175.00	1175	608	264	132	171	0	0	0
............................................................TGAGGTAGTAGGTTTTATAGT.................................................................................................	21	1	1	1043.00	1043	587	131	189	136	0	0	0
............................................................TGAGGTATTAGGTTGTATAGT.................................................................................................	21	1	1	989.00	989	646	191	138	12	2	0	0
..................................................................................................CTATACAATGTGCTAGCTTTCT..........................................................	22	0	1	913.00	913	605	49	232	27	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTTT...............................................................................................	23	2	1	846.00	846	211	353	248	33	1	0	0
............................................................TGATGTAGTAGGTTGTATAG..................................................................................................	20	1	1	828.00	828	705	42	79	2	0	0	0
............................................................TGAGGTCGTAGGTTGTATAGT.................................................................................................	21	1	1	824.00	824	155	40	610	19	0	0	0
............................................................TGAGGGAGTAGGTTGTATAG..................................................................................................	20	1	1	824.00	824	172	279	249	123	1	0	0
............................................................TGAGGAAGTAGGTTGTATAGT.................................................................................................	21	1	1	822.00	822	178	292	317	35	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGC.................................................................................................	21	1	1	816.00	816	462	221	48	85	0	0	0
............................................................TGAGGTAGTAGGCTGTATAGT.................................................................................................	21	1	1	813.00	813	472	232	55	52	1	0	1
............................................................TGAGGTAGTATGTTGTATAG..................................................................................................	20	1	1	785.00	785	607	98	70	9	1	0	0
............................................................TGAGGCAGTAGGTTGTATAG..................................................................................................	20	1	1	775.00	775	210	300	206	59	0	0	0
............................................................TGCGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	770.00	770	539	202	6	22	1	0	0
............................................................TGAGGTAGCAGGTTGTATAGT.................................................................................................	21	1	1	768.00	768	300	252	186	30	0	0	0
............................................................TGAGGTAGTAGGTTGTCTGG..................................................................................................	20	2	1	689.00	689	0	0	0	1	688	0	0
............................................................TGAGGTAGTAGGTTGCATAGT.................................................................................................	21	1	1	662.00	662	376	181	66	39	0	0	0
............................................................TGAGGGAGTAGGTTGTATAGTA................................................................................................	22	1	1	627.00	627	159	291	132	45	0	0	0
............................................................TGAGGTAGTAGTTTGTATAG..................................................................................................	20	1	1	608.00	608	221	106	268	13	0	0	0
............................................................TGAGTTAGTAGGTTGTATAGT.................................................................................................	21	1	1	587.00	587	469	62	50	6	0	0	0
............................................................TGAGGCAGTAGGTTGTATAGTA................................................................................................	22	1	1	557.00	557	154	259	126	18	0	0	0
............................................................TGATGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	551.00	551	462	28	59	2	0	0	0
............................................................TGAGGTAGTAGGTTGTGTAGT.................................................................................................	21	1	1	547.00	547	302	161	25	58	1	0	0
...........................................................CTGAGGTAGTAGGTTGTATAGT.................................................................................................	22	1	1	513.00	513	285	70	132	26	0	0	0
............................................................TGAGGTAGTATGTTGTATAGTA................................................................................................	22	1	1	490.00	490	368	69	48	5	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTAC...............................................................................................	23	1	1	488.00	488	292	151	31	14	0	0	0
............................................................CGAGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	487.00	487	253	116	84	34	0	0	0
............................................................TGAGGTGGTAGGTTGTATAGT.................................................................................................	21	1	1	475.00	475	238	153	42	42	0	0	0
............................................................TGAGGTAGTAGGTTGTCTAGT.................................................................................................	21	1	1	458.00	458	217	63	0	129	49	0	0
............................................................TGAGGTAGTAGGTTGTATG...................................................................................................	19	1	1	441.00	441	21	7	6	3	404	0	0
............................................................TGAGGTACTAGGTTGTATAGT.................................................................................................	21	1	1	434.00	434	214	102	109	8	1	0	0
............................................................TGGGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	434.00	434	160	172	81	21	0	0	0
............................................................TGAGGTAGTGGGTTGTATAGT.................................................................................................	21	1	1	431.00	431	239	112	37	43	0	0	0
............................................................TGAGGTAGTAGGGTGTATAGT.................................................................................................	21	1	1	415.00	415	75	111	186	43	0	0	0
............................................................TGAGGTAGTAGGTTGTATATTA................................................................................................	22	1	1	412.00	412	169	59	75	109	0	0	0
............................................................TGAGGTAGTAGGTTGTACAGT.................................................................................................	21	1	1	406.00	406	241	119	25	21	0	0	0
............................................................TGAGGTAGTACGTTGTATAGT.................................................................................................	21	1	1	398.00	398	186	103	100	9	0	0	0
............................................................TGACGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	391.00	391	197	29	161	4	0	0	0
............................................................TGAGGTAGTAGGTCGTATAGT.................................................................................................	21	1	1	388.00	388	255	78	38	16	1	0	0
............................................................TGAGGTAGTAGGTTGTATAGTG................................................................................................	22	1	1	384.00	384	214	99	52	19	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGGA................................................................................................	22	1	1	378.00	378	7	4	361	6	0	0	0
............................................................TGAGGTAGTAGGTTTTATAG..................................................................................................	20	1	1	375.00	375	196	41	63	75	0	0	0
............................................................TGAGGTAGTAGGTTGTATGGTT................................................................................................	22	2	1	375.00	375	8	3	4	0	360	0	0
............................................................TGAGGTAGAAGGTTGTATAGT.................................................................................................	21	1	1	365.00	365	71	61	216	17	0	0	0
............................................................TGAGGTAGTAGGTTCTATAGT.................................................................................................	21	1	1	363.00	363	196	114	40	13	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTAG...............................................................................................	23	0	1	346.00	346	203	96	33	14	0	0	0
............................................................TGAGGTATTAGGTTGTATAG..................................................................................................	20	1	1	343.00	343	214	49	75	5	0	0	0
..............................................................AGGTAGTAGGTTGTATAGT.................................................................................................	19	0	1	337.00	337	49	29	253	4	0	2	0
............................................................TGAGGTAGTAGGTTGTGTG...................................................................................................	19	2	1	325.00	325	0	0	0	0	325	0	0
............................................................GGAGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	313.00	313	49	173	85	6	0	0	0
............................................................TGAGGTAGTAGGTTGTCTGGT.................................................................................................	21	2	1	309.00	309	1	0	0	0	308	0	0
............................................................TGAGGTCGTAGGTTGTATAG..................................................................................................	20	1	1	306.00	306	54	14	226	12	0	0	0
............................................................TGAGGTAGTAGTTTGTATAGTA................................................................................................	22	1	1	302.00	302	124	44	132	2	0	0	0
............................................................TGAGGTAGTAGGTTGTCTAG..................................................................................................	20	1	1	299.00	299	88	14	0	32	165	0	0
............................................................TGAGGTAGTAGGTTATATAGT.................................................................................................	21	1	1	298.00	298	138	91	44	25	0	0	0
............................................................TGAGGAAGTAGGTTGTATAG..................................................................................................	20	1	1	297.00	297	48	96	143	9	1	0	0
............................................................TGAGGTAGTAGGTTGTATCGT.................................................................................................	21	1	1	290.00	290	159	46	4	76	5	0	0
............................................................TGAGGTAGCAGGTTGTATAG..................................................................................................	20	1	1	288.00	288	110	82	84	11	1	0	0
............................................................TGAAGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	282.00	282	185	22	37	38	0	0	0
............................................................TGAGGTAGTAAGTTGTATAGT.................................................................................................	21	1	1	280.00	280	147	59	27	46	1	0	0
............................................................TGAGGTAGTAGGTTGTATAGTC................................................................................................	22	1	1	276.00	276	103	91	37	45	0	0	0
............................................................TGTGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	264.00	264	168	72	15	9	0	0	0
............................................................TGGGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	263.00	263	96	124	35	8	0	0	0
............................................................TGCGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	262.00	262	186	68	2	4	2	0	0
............................................................TGAGGTAGTAGGTTGTATACT.................................................................................................	21	1	1	261.00	261	152	57	32	19	0	0	1
............................................................TAAGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	257.00	257	116	60	64	17	0	0	0
............................................................TGAGGTAGTAGCTTGTATAGT.................................................................................................	21	1	1	240.00	240	154	54	24	8	0	0	0
............................................................TGAGGTAGTAGGCTGTATAG..................................................................................................	20	1	1	236.00	236	130	70	17	18	1	0	0
............................................................TTAGGTAGTAGGTTGTATAGTAA...............................................................................................	23	2	1	222.00	222	76	138	8	0	0	0	0
............................................................TCAGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	220.00	220	124	63	27	6	0	0	0
.............................................................GAGGTAGTAGGTTGTATAGTT................................................................................................	21	1	1	213.00	213	6	6	199	2	0	0	0
............................................................TGAGGTAATAGGTTGTATAGT.................................................................................................	21	1	1	212.00	212	125	54	23	10	0	0	0
............................................................TGAGCTAGTAGGTTGTATAGT.................................................................................................	21	1	1	210.00	210	109	56	40	5	0	0	0
............................................................TGAGGTAGTCGGTTGTATAGT.................................................................................................	21	1	1	209.00	209	127	42	3	36	1	0	0
............................................................TGAGGTAGTAGGTTGCATAG..................................................................................................	20	1	1	208.00	208	106	62	22	18	0	0	0
............................................................TGAGGTAGTAGGTTGTATAAA.................................................................................................	21	2	1	207.00	207	121	75	8	3	0	0	0
............................................................TGAGGTAGTAGGTTGTATAAT.................................................................................................	21	1	1	206.00	206	108	43	25	30	0	0	0
............................................................TGAGGTAGTAGTTTGTACAG..................................................................................................	20	2	1	201.00	201	0	0	2	0	199	0	0
............................................................TGAGGTAGTAGGTTTTATAGTA................................................................................................	22	1	1	196.00	196	108	19	51	18	0	0	0
...............................................................TGTAGTAGGTTGTATAGT.................................................................................................	18	1	1	195.00	195	124	50	20	0	0	1	0
............................................................TGAGGAAGTAGGTTGTATAGTA................................................................................................	22	1	1	194.00	194	30	91	70	3	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGAA................................................................................................	22	1	1	193.00	193	95	77	12	9	0	0	0
............................................................TGAGGTAGTAGGTTGTTTAGT.................................................................................................	21	1	1	188.00	188	77	52	9	50	0	0	0
............................................................TGAGGTAGTAGGCTGTATAGTA................................................................................................	22	1	1	186.00	186	86	70	17	13	0	0	0
............................................................TGAGGTATTAGGTTGTATAGTA................................................................................................	22	1	1	185.00	185	128	32	23	2	0	0	0
............................................................TGAGGTAGTAGATTGTATAG..................................................................................................	20	1	1	183.00	183	29	14	6	5	129	0	0
............................................................TGAGTTAGTAGGTTGTATAG..................................................................................................	20	1	1	181.00	181	137	26	16	2	0	0	0
............................................................TGAGGTAGGAGGTTGTATAGT.................................................................................................	21	1	1	176.00	176	35	33	16	40	52	0	0
............................................................TGAGGTAGTAGGTTGTGT....................................................................................................	18	1	1	174.00	174	2	0	2	1	169	0	0
............................................................TGAGGTAGTAGATTGTATAGT.................................................................................................	21	1	1	174.00	174	97	31	11	7	28	0	0
............................................................TGAGGTAGTAGGTTGAATAGT.................................................................................................	21	1	1	173.00	173	64	25	75	9	0	0	0
............................................................TGAGGTAGCAGGTTGTATAGTA................................................................................................	22	1	1	172.00	172	58	72	40	2	0	0	0
............................................................TGAGATAGTAGGTTGTATAGT.................................................................................................	21	1	1	163.00	163	98	32	17	16	0	0	0
............................................................CGAGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	162.00	162	68	38	40	16	0	0	0
............................................................TGAGGTCGTAGGTTGTATAGTA................................................................................................	22	1	1	161.00	161	26	8	125	2	0	0	0
............................................................TGAGGTAGTAGGTTGGATAGT.................................................................................................	21	1	1	161.00	161	37	14	95	15	0	0	0
............................................................TGAGGTAGTAGGTTGTATTT..................................................................................................	20	2	2	160.00	320	58	161	93	8	0	0	0
............................................................TGAGGTGGTAGGTTGTATAG..................................................................................................	20	1	1	158.00	158	82	34	15	26	1	0	0
............................................................TGAGGTAGTACGTTGTATAG..................................................................................................	20	1	1	158.00	158	71	29	58	0	0	0	0
............................................................TGAGGTAGTAGGTTCTATAG..................................................................................................	20	1	1	154.00	154	69	58	21	6	0	0	0
............................................................TGAGGTACTAGGTTGTATAG..................................................................................................	20	1	1	150.00	150	54	30	59	6	1	0	0
............................................................AGAGGTAGTAGGTTGTATAGT.................................................................................................	21	1	1	150.00	150	46	20	77	7	0	0	0
............................................................TGAGGTAGTAGGTTGTGTAG..................................................................................................	20	1	1	146.00	146	64	42	25	11	4	0	0
............................................................TGAGGTAGTAGGTTGTATAC..................................................................................................	20	1	1	146.00	146	69	45	17	15	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTTA...............................................................................................	23	2	1	141.00	141	49	58	23	11	0	0	0
............................................................TGAGGTAGAAGGTTGTATAG..................................................................................................	20	1	1	141.00	141	33	22	82	4	0	0	0
............................................................TGCGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	140.00	140	89	48	1	2	0	0	0
............................................................TGAGGTAGTTGGTTGTATAGT.................................................................................................	21	1	1	138.00	138	56	30	33	19	0	0	0
............................................................TGAGGTAGTAGGTTGTACAG..................................................................................................	20	1	1	134.00	134	76	33	15	10	0	0	0
............................................................TGAGGTAGTAGGGTGTATAG..................................................................................................	20	1	1	133.00	133	13	24	85	11	0	0	0
............................................................TGAGGTAGTGGGTTGTATAG..................................................................................................	20	1	1	133.00	133	52	39	17	18	7	0	0
...........................................................CTGAGGTAGTAGGTTGTATAG..................................................................................................	21	1	1	132.00	132	56	16	51	9	0	0	0
............................................................TGAGGTAGTAGGTTGTGTAGTA................................................................................................	22	1	1	130.00	130	58	53	15	4	0	0	0
..................................................................................................CTATACAATGTGCTAGCTTTC...........................................................	21	0	1	130.00	130	76	6	43	5	0	0	0
............................................................TGAGGTAGTAGGTTGCATAGTA................................................................................................	22	1	1	127.00	127	65	37	21	4	0	0	0
............................................................TGAGGTAGTAGGTTATATAG..................................................................................................	20	1	1	125.00	125	62	30	19	14	0	0	0
............................................................TGACGTAGTAGGTTGTATAG..................................................................................................	20	1	1	124.00	124	54	20	47	3	0	0	0
............................................................TGAGGTAGTAGGTCGTATAG..................................................................................................	20	1	1	122.00	122	72	26	14	6	4	0	0
............................................................TGATGTAGTAGGTTGTATAGTAA...............................................................................................	23	2	1	120.00	120	112	6	2	0	0	0	0
............................................................TGAGTTAGTAGGTTGTATAGTA................................................................................................	22	1	1	119.00	119	86	22	10	1	0	0	0
...............................................................GGTAGTAGGTTGTATAGT.................................................................................................	18	0	1	119.00	119	40	45	30	1	0	3	0
..............................................................AGGTAGTAGGTTGTATAG..................................................................................................	18	0	1	117.00	117	15	5	95	2	0	0	0
............................................................TGAGGTAGTAGGTTGTATGGTA................................................................................................	22	1	1	115.00	115	52	35	3	10	15	0	0
............................................................TGAGGTAGTAGGTTGTAGT...................................................................................................	19	2	2	114.00	228	96	125	6	1	0	0	0
............................................................TGAGGTAGTAGTTTGTACAGT.................................................................................................	21	2	1	114.00	114	0	0	1	2	111	0	0
............................................................TGAGGTAGTAGGTGGTATGG..................................................................................................	20	2	2	112.50	225	0	0	0	0	225	0	0
............................................................CGAGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	111.00	111	51	32	20	8	0	0	0
............................................................GGAGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	109.00	109	23	50	36	0	0	0	0
............................................................TTAGGTAGTAGGTTGTATA...................................................................................................	19	1	1	109.00	109	54	51	4	0	0	0	0
............................................................TGAGGTAGTACGTTGTATAGTA................................................................................................	22	1	1	108.00	108	51	31	26	0	0	0	0
.............................................................TAGGTAGTAGGTTGTATAGT.................................................................................................	20	1	1	108.00	108	42	32	34	0	0	0	0
.............................................................GAGGTAGTAGGTTGTATAGTAA...............................................................................................	22	1	1	107.00	107	18	17	70	2	0	0	0
............................................................TGAGGCAGTAGGTTGTATAGTAA...............................................................................................	23	2	1	107.00	107	36	61	8	2	0	0	0
............................................................TGAGGTAGTAGGTTGTATCG..................................................................................................	20	1	1	106.00	106	52	20	0	29	5	0	0
............................................................TTAGGTAGTAGGTTGTATAGTT................................................................................................	22	2	1	105.00	105	44	41	19	1	0	0	0
............................................................TGAAGTAGTAGGTTGTATAG..................................................................................................	20	1	1	103.00	103	57	13	18	15	0	0	0
............................................................TGAGGGAGTAGGTTGTATAGTAA...............................................................................................	23	2	1	103.00	103	32	53	11	7	0	0	0
............................................................TGAGGTAGTAGGTTGTATACTA................................................................................................	22	1	1	101.00	101	52	28	21	0	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGCA................................................................................................	22	1	1	100.00	100	49	37	6	8	0	0	0
............................................................TGAGGTAGTAGGATGTATAGT.................................................................................................	21	1	2	99.50	199	88	81	17	13	0	0	0
............................................................TGAGGTAGTAGGTTGTAAAGT.................................................................................................	21	1	1	98.00	98	64	22	7	5	0	0	0
............................................................TGAGGTACTAGGTTGTATAGTA................................................................................................	22	1	1	98.00	98	49	20	29	0	0	0	0
............................................................TGTGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	97.00	97	49	27	14	7	0	0	0
............................................................TGAGGTAGTAGGTCGTATAGTA................................................................................................	22	1	1	97.00	97	52	27	14	4	0	0	0
............................................................TGAGGTAGTAGGGTGTATAGTA................................................................................................	22	1	1	96.00	96	16	37	38	5	0	0	0
............................................................TGAGGTAGTAAGTTGTATAG..................................................................................................	20	1	1	95.00	95	42	25	13	15	0	0	0
............................................................TGAGGTAGTAGGTTGTATTGT.................................................................................................	21	1	1	93.00	93	47	18	9	19	0	0	0
............................................................TGAGGTGGTAGGTTGTATAGTA................................................................................................	22	1	1	91.00	91	43	32	13	3	0	0	0
............................................................TGAGGTTGTAGGTTGTATAGT.................................................................................................	21	1	1	90.00	90	40	24	11	15	0	0	0
............................................................TGAGGTAGTATGTTGTATAGTAA...............................................................................................	23	2	1	89.00	89	81	7	1	0	0	0	0
............................................................TGAGGTAGTAGGTTGTAA....................................................................................................	18	1	1	89.00	89	53	22	8	1	5	0	0
............................................................TGAGGGAGTAGGTTGTATAGTT................................................................................................	22	2	1	89.00	89	10	38	34	7	0	0	0
...........................................................ATGAGGTAGTAGGTTGTATGG..................................................................................................	21	2	1	88.00	88	0	0	0	0	88	0	0
............................................................TGAGGTAGTAGGTTATAG....................................................................................................	18	2	4	87.50	350	148	126	75	1	0	0	0
..............................................................AGGTAGTAGGTTGTATAGTA................................................................................................	20	0	1	87.00	87	8	8	69	2	0	0	0
............................................................TTAGGGAGTAGGTTGTATAGT.................................................................................................	21	2	1	87.00	87	7	78	1	1	0	0	0
............................................................TAAGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	85.00	85	42	18	20	5	0	0	0
............................................................TGAGGTAGTAGGTTGTAAA...................................................................................................	19	1	1	85.00	85	47	32	5	1	0	0	0
............................................................GGAGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	85.00	85	13	57	15	0	0	0	0
...........................................................TTGAGGTAGTAGGTTGTATAGT.................................................................................................	22	0	1	85.00	85	2	2	81	0	0	0	0
............................................................TGAGGTAGTAGCTTGTATAG..................................................................................................	20	1	1	83.00	83	44	25	9	5	0	0	0
............................................................TGAGGTAGAAGGTTGTATAGTA................................................................................................	22	1	1	82.00	82	15	20	45	2	0	0	0
............................................................TGAGGTAGGAGGTTGTATAG..................................................................................................	20	1	1	80.00	80	18	17	8	5	32	0	0
............................................................TGAGGTAGTGGGTTGTATAGTA................................................................................................	22	1	1	79.00	79	37	32	5	5	0	0	0
............................................................TGAGCTAGTAGGTTGTATAG..................................................................................................	20	1	1	79.00	79	39	19	21	0	0	0	0
...........................................................CTGAGGTAGTAGGTTGTATAGTA................................................................................................	23	1	1	78.00	78	35	10	32	1	0	0	0
............................................................TGAGGTAGTAGGTTGTCTG...................................................................................................	19	2	1	76.00	76	0	0	0	0	76	0	0
............................................................TGAGGTAGTAGGTTGTATAGTAAT..............................................................................................	24	1	1	75.00	75	31	36	4	4	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTAAAA.............................................................................................	25	2	1	74.00	74	34	37	0	3	0	0	0
.............................................................GAGGCAGTAGGTTGTATAGT.................................................................................................	20	1	1	72.00	72	1	1	70	0	0	0	0
............................................................TGACGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	71.00	71	26	9	36	0	0	0	0
............................................................TGAGGTAGTCGGTTGTATAG..................................................................................................	20	1	1	70.00	70	34	11	1	21	3	0	0
.............................................................GAGGTAGTAGGTTGTATA...................................................................................................	18	0	1	70.00	70	5	4	60	1	0	0	0
............................................................TGAGGTAGTAGGTTGAATAG..................................................................................................	20	1	1	69.00	69	12	6	47	4	0	0	0
...........................................................ATGAGGTAGTAGGTTGTATAGT.................................................................................................	22	1	1	69.00	69	6	0	54	2	7	0	0
............................................................TGAGGTAGTAGGTTGTATATTT................................................................................................	22	2	1	68.00	68	22	15	9	22	0	0	0
............................................................TGAGGTAGTAGGTTGTACAGTA................................................................................................	22	1	1	68.00	68	37	18	10	3	0	0	0
............................................................TGAGGTAGTAGGTTGTATATA.................................................................................................	21	2	1	68.00	68	32	12	13	11	0	0	0
............................................................TGAGGTAGTAGGTTGTCTGGTT................................................................................................	22	3	1	67.00	67	0	0	0	0	67	0	0
............................................................TGAGGTAGTAGGTTGTCTAGTA................................................................................................	22	1	1	67.00	67	40	11	0	13	3	0	0
............................................................TGAGGTAGTAGGTTGGATAG..................................................................................................	20	1	1	66.00	66	4	5	47	10	0	0	0
............................................................TGAGGCAGTAGGTTGTATAGTT................................................................................................	22	2	1	66.00	66	14	32	16	4	0	0	0
..........................................................TCTGAGGTAGTAGGTTGTATAGT.................................................................................................	23	2	1	65.00	65	30	28	3	4	0	0	0
............................................................TGAGGTAGTATGTTGTATA...................................................................................................	19	1	1	65.00	65	59	2	3	1	0	0	0
............................................................TGATGTAGTAGGTTGTATA...................................................................................................	19	1	1	65.00	65	63	0	1	1	0	0	0
............................................................TAAGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	64.00	64	30	15	17	2	0	0	0
............................................................TGAGGTAGTAGGTTGTATTA..................................................................................................	20	2	1	64.00	64	32	19	12	1	0	0	0
............................................................TGAGGTAATAGGTTGTATAG..................................................................................................	20	1	1	63.00	63	33	8	15	7	0	0	0
............................................................TGAGGTAGTAGGTTGTATATTAA...............................................................................................	23	2	1	62.00	62	40	17	1	4	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTATT..............................................................................................	24	1	1	62.00	62	22	30	7	3	0	0	0
............................................................TGAGGTAGTTGGTTGTATAG..................................................................................................	20	1	1	60.00	60	16	12	27	4	1	0	0
............................................................TGAGGGAGTAGGTTGTATA...................................................................................................	19	1	1	60.00	60	24	22	3	11	0	0	0
..............................................................TGGTAGTAGGTTGTATAGT.................................................................................................	19	1	1	58.00	58	37	8	13	0	0	0	0
............................................................TGAGGTAGGAGGTTGTATA...................................................................................................	19	1	1	58.00	58	0	2	1	1	54	0	0
............................................................TGAGGTAGTAGGTTGTATCGTA................................................................................................	22	1	1	57.00	57	30	9	2	16	0	0	0
............................................................TGAGGTAGTAGGTGGTATGGT.................................................................................................	21	2	2	56.50	113	0	0	0	0	113	0	0
............................................................TGAGGTAGTAGGTTCTATAGTA................................................................................................	22	1	1	56.00	56	29	15	10	2	0	0	0
...........................................................GTGAGGTAGTAGGTTGTATAGT.................................................................................................	22	1	1	56.00	56	0	0	55	1	0	0	0
............................................................TCAGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	56.00	56	31	13	10	2	0	0	0
............................................................AGAGGTAGTAGGTTGCATAG..................................................................................................	20	2	1	56.00	56	0	0	0	0	56	0	0
............................................................TGAGGTAGTAAGTTGTATAGTA................................................................................................	22	1	1	54.00	54	26	17	6	5	0	0	0
............................................................TCAGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	53.00	53	24	20	9	0	0	0	0
............................................................TGAGATAGTAGGTTGTATAG..................................................................................................	20	1	1	53.00	53	34	12	2	5	0	0	0
.............................................................GAGGTAGTAGGTTGTATAGA.................................................................................................	20	1	1	53.00	53	5	5	43	0	0	0	0
............................................................TGAGGTAGTAGGATGTATAGTA................................................................................................	22	1	1	52.00	52	14	28	7	3	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTTAA..............................................................................................	24	3	1	52.00	52	27	22	3	0	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGGT................................................................................................	22	2	1	51.00	51	1	0	48	2	0	0	0
............................................................TGAGGTAGTAGGTTATATAGTA................................................................................................	22	1	1	51.00	51	21	16	9	5	0	0	0
............................................................TTAGGTAGTAGGTTGTATAGTAT...............................................................................................	23	2	1	51.00	51	23	26	2	0	0	0	0
............................................................TGAGGTAGTAGGTTGTATAATA................................................................................................	22	1	1	51.00	51	25	14	8	4	0	0	0
............................................................TGAGGTAGTAGTTTGTATAGTAA...............................................................................................	23	2	1	50.00	50	27	15	7	1	0	0	0
............................................................TGAGGTAGTAGGTTGT......................................................................................................	16	0	1	48.00	48	0	0	0	0	48	0	0
.............................................................TAGGTAGTAGGTTGTATAGTA................................................................................................	21	1	1	48.00	48	10	21	17	0	0	0	0
.............................................................GAGGTAGTAGTTTGTATAGT.................................................................................................	20	1	1	47.00	47	0	1	46	0	0	0	0
............................................................AGAGGTAGTAGGTTGCATAGT.................................................................................................	21	2	1	46.00	46	0	0	0	0	46	0	0
............................................................TGAGGTAGTAGTTTGTATAGTT................................................................................................	22	2	1	45.00	45	15	3	27	0	0	0	0
............................................................TGAGGTAATAGGTTGTATAGTA................................................................................................	22	1	1	45.00	45	20	15	8	2	0	0	0
............................................................TGAGGTAGTAGGTGGTATAGT.................................................................................................	21	1	2	44.50	89	19	8	42	4	16	0	0
............................................................TTAGGTAGTAGGTTGTAT....................................................................................................	18	1	1	44.00	44	31	8	5	0	0	0	0
............................................................TGAGGTAGTAGGTTGTTTAG..................................................................................................	20	1	1	44.00	44	14	9	7	14	0	0	0
............................................................TTAGGTAGTATGTTGTATAGT.................................................................................................	21	2	1	43.00	43	36	5	2	0	0	0	0
............................................................TGATGTAGTAGGTTGTATAGTT................................................................................................	22	2	1	43.00	43	28	2	13	0	0	0	0
............................................................TGAGCTAGTAGGTTGTATAGTA................................................................................................	22	1	1	43.00	43	18	11	13	1	0	0	0
............................................................TGAGGTAGTAGGTTGTAAAG..................................................................................................	20	1	1	42.00	42	22	11	4	4	1	0	0
............................................................TGAGGTAGTAGGTTGTCTA...................................................................................................	19	1	1	42.00	42	5	0	0	3	34	0	0
............................................................TGAGGTAGTAGGTTGTATAGTTTT..............................................................................................	24	2	1	42.00	42	6	17	16	3	0	0	0
............................................................TTAGGTAGTAGGTTGTATAGA.................................................................................................	21	2	1	42.00	42	23	16	3	0	0	0	0
............................................................TGAGGTAGTAGCTTGTATAGTA................................................................................................	22	1	1	42.00	42	25	15	0	2	0	0	0
.............................................................TGAGTAGTAGGTTGTATAGT.................................................................................................	20	3	10	40.70	407	160	120	123	4	0	0	0
............................................................TGAGGTAGTAGGTTGTAGAGT.................................................................................................	21	1	1	40.00	40	11	5	1	20	3	0	0
............................................................TGGGGTAGTAGGTTGTATAGTAA...............................................................................................	23	2	1	40.00	40	17	18	5	0	0	0	0
............................................................TGAGGTAGTATGTTGTATAGTT................................................................................................	22	2	1	40.00	40	31	6	3	0	0	0	0
............................................................TGAGGTAGTAGGTGGTATAG..................................................................................................	20	1	2	39.00	78	9	5	22	1	41	0	0
...............................................................TGTAGTAGGTTGTATAGTA................................................................................................	19	1	1	39.00	39	21	12	6	0	0	0	0
.............................................................TGAGTAGTAGGTTGTATAGTA................................................................................................	21	3	3	38.33	115	41	40	33	1	0	0	0
............................................................TGAAGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	38.00	38	28	3	4	3	0	0	0
............................................................TGAGGTAGTAGGTTGTCT....................................................................................................	18	1	1	38.00	38	1	0	0	0	37	0	0
............................................................TGAGGTAGTAGGTAGTATAGT.................................................................................................	21	1	1	37.00	37	14	7	12	2	2	0	0
............................................................TGAGGTAGTAGATTGTATAGTA................................................................................................	22	1	1	37.00	37	21	12	3	1	0	0	0
............................................................TGTGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	36.00	36	24	10	2	0	0	0	0
...............................................................GGTAGTAGGTTGTATAGTA................................................................................................	19	0	1	36.00	36	9	18	9	0	0	0	0
............................................................AGAGGTAGTAGGTTGTATAGTA................................................................................................	22	1	1	36.00	36	10	8	15	3	0	0	0
............................................................AGAGGTAGTAGGTTGTATAG..................................................................................................	20	1	1	36.00	36	7	4	23	2	0	0	0
............................................................TGAGGTAGTAGGTTGTATAGTATA..............................................................................................	24	2	1	35.00	35	22	12	1	0	0	0	0
............................................................TGAGGCAGTAGGTTGTATA...................................................................................................	19	1	1	35.00	35	13	20	2	0	0	0	0
.............................................................GATGTAGTAGGTTGTATAGT.................................................................................................	20	1	1	35.00	35	2	1	32	0	0	0	0
............................................................TGAGGTATTAGGTTGTATAGTAA...............................................................................................	23	2	1	35.00	35	27	8	0	0	0	0	0
.............................................................GAGGTAGTAGGTTGTATGG..................................................................................................	19	1	1	34.00	34	0	0	1	0	33	0	0
...........................................................ATGAGGTAGTAGGTTGTATAG..................................................................................................	21	1	1	34.00	34	1	0	26	0	7	0	0
............................................................TGAGGTCGTAGGGTGTATAGT.................................................................................................	21	2	1	33.00	33	0	0	32	1	0	0	0
............................................................TGAGGTTGTAGGTTGTATAG..................................................................................................	20	1	1	33.00	33	19	6	3	5	0	0	0
............................................................TGAGGTAGTAGGTAGTATGG..................................................................................................	20	2	1	33.00	33	0	0	0	0	33	0	0
............................................................TGAGGTAGTATGTTGTATAGA.................................................................................................	21	2	1	32.00	32	29	3	0	0	0	0	0
............................................................TGGGGTAGTAGGTTGTATAGTT................................................................................................	22	2	1	32.00	32	9	9	14	0	0	0	0
............................................................TGAGGTAGTAGGTTGAATAGTA................................................................................................	22	1	1	32.00	32	6	6	18	2	0	0	0
............................................................TGAGGTAGGAGGTTGTATAGTT................................................................................................	22	2	1	32.00	32	0	1	2	2	27	0	0
............................................................TGAGGTAGTAGGTTTTATAGTAA...............................................................................................	23	2	1	32.00	32	21	6	3	2	0	0	0
............................................................TGATGTAGTAGGTTGTAT....................................................................................................	18	1	1	32.00	32	28	1	3	0	0	0	0
............................................................TGATGTAGTATGTTGTATAGT.................................................................................................	21	2	1	32.00	32	32	0	0	0	0	0	0
............................................................TGAGGTAGGAGGTTGTATAGTA................................................................................................	22	1	1	31.00	31	7	13	7	4	0	0	0
..............................................................AGGTAGTAGGTTGTATG...................................................................................................	17	1	1	31.00	31	0	0	0	0	31	0	0
............................................................TGAGGTAGTAGGTTTTATATT.................................................................................................	21	2	1	31.00	31	10	0	0	21	0	0	0
............................................................TGAGGTAGCAGGTTGTATAGTAA...............................................................................................	23	2	1	31.00	31	12	17	0	2	0	0	0
............................................................TGGGGGAGTAGGTTGTATAGT.................................................................................................	21	2	1	31.00	31	9	7	1	14	0	0	0
............................................................TGAGGTAGTATGTTGTAT....................................................................................................	18	1	1	30.00	30	27	1	0	1	1	0	0
.............................................................GAGGTAGTAGGTTGTATAGTAT...............................................................................................	22	1	1	30.00	30	3	5	21	1	0	0	0
............................................................TGAGGTAGTAGGCTGTATAGTAA...............................................................................................	23	2	1	30.00	30	15	13	0	2	0	0	0
...........................................................TTGAGGTAGTAGGTTGTATAG..................................................................................................	21	0	1	30.00	30	1	1	28	0	0	0	0
.............................................................GAGGTAGCAGGTTGTATAGT.................................................................................................	20	1	1	30.00	30	0	0	30	0	0	0	0
............................................................TGAGGTAGTAGGTTGTGTAGG.................................................................................................	21	2	1	29.00	29	1	0	26	2	0	0	0

Species	Coordinate	ID	Type	Alignment
droEre2	scaffold_4845:5799366-5799543 -	der-let-7	Known_mirbase	TAAAA-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AT-----CCC-AATCG----------A--ACTGCACCACTTGC-T
droYak3	2R:4988783-4988961 +	dya-let-7	Known_mirbase	AAAAA-ACCAA--------AAC---------------CTCCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AT-----CCC-AATCG----------A--ACCGCACCACTTAC-T
droSec2	scaffold_7:2097932-2098109 +	dse-let-7	Known_mirbase	TAAAA-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AC-----CCC-AATCG----------A--ACTGCACCACTTAC-T
droSim2	2l:18033000-18033177 +	dsi-let-7	Known_mirbase	TAAAA-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AC-----CCC-AATCG----------A--ACTGCACCACTTAC-T
dm3	chr2L:18471984-18472161 +	dme-let-7	Known_mirbase	TAAAT-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATAA--AAGA-AT-----CCC-AATCG----------A--ACTGCACCACTTAA-T
droEug1	scf7180000409447:414614-414790 +			TAAAA-ACCAA---------AC---------------CACCCAGCAAAAAGGACTA-CACTAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCA--ATTGATTT--AA--ACT-----CCC-AATCG----------A--ACTGCACCGCCAAC-A
droBia1	scf7180000302422:5215503-5215677 -			TAAAC-ACCAA---------AC---------------CACCCAGCAAAAAGGACT--CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCACA--ATTGATTT--AA--ACT-----CCC-AATC-----------A--GCTGCACCACCAAC-T
droTak1	scf7180000415867:746898-747074 +			TAAAA-ACCAA---------AA---------------TACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGATTA--AA--ACT-----CCC-AATCG----------A--ATTGCACAACCAAC-T
droEle1	scf7180000491338:2439440-2439619 +			TTAAA-ACCAA---------AC---------CA---CCACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACT-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGCTTT--AA--ACT-----CCC-TATCG----------A--TCTGCACCATCAAC-A
droRho1	scf7180000780227:12573-12752 +			TAAAA-ACCAA---------AC---------CA---CCACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGATTA--AA--ACT-----CCC-AATCG----------A--AGTGCACCACCAAC-A
droFic1	scf7180000454059:475743-475920 -			TAAAA-ACCAA---------AC---------------CACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGATTA--AA--ACT-----CCC-AATCG----------A--ACTTCACCGCCAACCA
droKik1	scf7180000302401:71719-71882 -			TAATTTACCAA---------AA---------AAT--CCACCCAGCAAAAGGGACTA-AACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA-ATTTAATCC--AAGA-AA---------------------------------CCAC------
droAna3	scaffold_12916:2379131-2379303 +	dan-let-7	Known_mirbase	TCACG-ACCTA---------AC---------------CACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGATTT--GAAA-ATCCCCCCCC-AATGG----------A--G----------TTC-T
droBip1	scf7180000396430:324821-325003 +			TCACG-ACCTA---------AC---------------CACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGATTTCAAATA-TT-C---CCC-AATGG----------AGTTCTACATAAATATG-T
dp5	4_group3:3635600-3635784 +	dps-let-7	Known_mirbase	AAAAC-CGCAA---------AC---------CATAA--GCCCAACAAAAAGGACCAGCACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGAACA--GCCC-AGCCC--CCCGCCCCA----------A--ACAGCTCC-CGTAC-G
droPer2	scaffold_1:5116179-5116327 +	dpe-let-7-1	Known_mirbase	AAAAC-CGCAA---------AC---------CATAA--GCCCAACAAAAAGGACCAGCACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGA-------------------------------------------------------
droWil2	scf2_1100000004521:11623100-11623257 +	dwi-let-7	Known_mirbase	TAAAA-CCTCA---------AT---------------TAAA-TGCAAAAAGGACTACTTAAAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTATTCAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACAGATATGATCT--A---------------AATAG----------A------------------
droVir3	scaffold_12963:18451291-18451469 +	dvi-let-7	Known_mirbase	CAAAA-ACAAA--------CAGCAGGCAAGCTAAAA--G---GACAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATTTATA-GAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--A----------AGA-AA-----ACC-AACCC--------------CCCCATCCCTCTC-T
droMoj3	scaffold_6500:6184537-6184717 -	dmo-let-7	Known_mirbase	TAAAA-ACCAACTGACATAAACC--------------AAGCAAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTTATA-GACCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACTATAAGCCGCA--A----------AGACAT-----CCC-ACACA----------C--ACTCGCCCAGCCAT-A
droGri2	scaffold_3792:96-282 +	dgr-let-7-1	Known_mirbase	AAAAA-ACAAA--------AAC---------------CAGCAAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATC-TAGCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCA--TA-GAACG--AA--ACC-----CTC-TCACACACTGAAAAAA--AAAACACCACTGAA-T

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droEre2

TAAAA-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AT-----CCC-AATCG----------A--ACTGCACCACTTGC-T	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	631309.00	631309	99504	7	33076	6	234209	264178	329
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	206387.00	206387	41400	0	11611	4	73822	78597	953
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	136725.00	136725	22606	2	5120	7	59777	49188	25
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	23925.00	23925	1290	0	550	0	11318	10765	2
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	14106.00	14106	1384	0	488	1	5247	6746	240
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	13808.00	13808	4046	1	728	0	5335	3677	21
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	6043.00	6043	5468	8	30	0	250	287	0
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	5697.00	5697	544	0	231	1	2267	2653	1
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	5479.00	5479	810	0	358	0	1170	2853	288
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	3846.00	3846	399	0	127	0	1961	1359	0
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	2794.00	2794	135	0	110	0	943	1606	0
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	2184.00	2184	2016	0	12	0	79	74	3
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	2015.00	2015	96	0	35	0	896	988	0
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	1661.00	1661	312	0	54	0	695	600	0
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	1553.00	1553	1418	0	38	0	42	55	0
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1489.00	1489	1323	0	9	0	95	62	0
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	1175.00	1175	132	0	171	0	264	608	0
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	913.00	913	232	0	27	0	49	605	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	846.00	846	248	0	33	0	353	211	1
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	816.00	816	48	0	85	0	221	462	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	488.00	488	31	0	14	0	151	292	0
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	441.00	441	6	0	3	0	7	21	404
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	384.00	384	52	0	19	0	99	214	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	346.00	346	33	0	14	0	96	203	0
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	337.00	337	253	2	4	0	29	49	0
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	276.00	276	37	0	45	0	91	103	0
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	213.00	213	199	0	2	0	6	6	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	207.00	207	8	0	3	0	75	121	0
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	2	160.00	320	93	0	8	0	161	58	0
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	146.00	146	17	0	15	0	45	69	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	141.00	141	23	0	11	0	58	49	0
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	130.00	130	43	0	5	0	6	76	0
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	119.00	119	30	3	1	0	45	40	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	117.00	117	95	0	2	0	5	15	0
......................................................................................TGAGGTAGTAGGTTGTAGT............................................................................................................................	19	2	114.00	228	6	0	1	0	125	96	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	107.00	107	70	0	2	0	17	18	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	89.00	89	8	0	1	0	22	53	5
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	87.00	87	69	0	2	0	8	8	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	85.00	85	81	0	0	0	2	2	0
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	70.00	70	60	0	1	0	4	5	0
......................................................................................TGAGGTAGTAGGTTGTATATA..........................................................................................................................	21	1	68.00	68	13	0	11	0	12	32	0
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	1	64.00	64	12	0	1	0	19	32	0
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	53.00	53	43	0	0	0	5	5	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	52.00	52	3	0	0	0	22	27	0
......................................................................................TGAGGTAGTAGGTTGTATAGGT.........................................................................................................................	22	1	51.00	51	48	0	2	0	0	1	0
......................................................................................TGAGGTAGTAGGTTGT...............................................................................................................................	16	1	48.00	48	0	0	0	0	0	0	48
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	36.00	36	9	0	0	0	18	9	0
......................................................................................TGAGGTAGTAGGTTGTATAGTATA.......................................................................................................................	24	1	35.00	35	1	0	0	0	12	22	0
........................................................................................AGGTAGTAGGTTGTATG............................................................................................................................	17	1	31.00	31	0	0	0	0	0	0	31
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	30.00	30	21	0	1	0	5	3	0
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	30.00	30	28	0	0	0	1	1	0

droYak3

AAAAA-ACCAA--------AAC---------------CTCCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AT-----CCC-AATCG----------A--ACCGCACCACTTAC-T	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	184175.00	184175	21297	69150	22	12	16312	28998	48344	0	4	4	32
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	53716.00	53716	4096	23385	0	3	5969	10129	10113	0	0	0	21
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	38427.00	38427	7802	16013	4	14	1733	3133	9714	0	6	8	0
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	5047.00	5047	5	4972	13	0	8	20	29	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	4970.00	4970	2305	955	0	0	269	478	936	0	0	0	27
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	4255.00	4255	572	2014	1	0	248	566	854	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	3961.00	3961	264	848	0	3	236	446	2161	0	1	2	0
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	1848.00	1848	444	579	0	0	265	468	30	0	0	0	62
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	1414.00	1414	0	1396	0	0	3	4	11	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	1364.00	1364	1223	38	0	0	35	54	14	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	1324.00	1324	252	325	0	0	100	258	389	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	1164.00	1164	501	274	0	0	81	133	175	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	1163.00	1163	929	30	1	0	28	107	68	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1096.00	1096	4	1076	0	0	1	4	11	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	1061.00	1061	39	317	0	0	48	104	553	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	494.00	494	47	65	0	0	57	104	221	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	402.00	402	12	365	7	0	3	1	14	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	387.00	387	82	46	0	1	18	39	201	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	324.00	324	10	37	0	0	96	145	36	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	283.00	283	31	125	0	0	12	22	93	0	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	275.00	275	7	222	2	0	9	17	16	0	0	2	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	245.00	245	152	23	0	0	7	24	39	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	232.00	232	87	38	0	0	33	48	26	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	207.00	207	11	183	6	0	0	2	5	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	1	159.00	159	23	54	0	0	14	29	39	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	134.00	134	24	71	0	0	12	17	10	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	121.00	121	0	118	0	0	0	1	2	0	0	0	0
...............................................................................................................................ATACAATGTGCTAGCTTTCT..................................................................................	20	1	120.00	120	0	119	1	0	0	0	0	0	0	0	0
.................................................................................................................................ACAATGTGCTAGCTTTCT..................................................................................	18	1	86.00	86	0	86	0	0	0	0	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	78.00	78	3	71	0	0	1	0	3	0	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	75.00	75	0	74	0	0	0	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	71.00	71	35	2	0	0	5	19	10	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	68.00	68	1	65	0	0	0	0	1	0	0	0	1
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	66.00	66	0	66	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	61.00	61	1	29	0	0	5	11	15	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	60.00	60	3	51	0	0	0	1	5	0	0	0	0
................................................................................................................................TACAATGTGCTAGCTTTCT..................................................................................	19	1	59.00	59	0	58	1	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAC.............................................................................................................................	18	1	50.00	50	44	2	0	0	1	3	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	48.00	48	16	6	0	0	2	3	21	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	44.00	44	37	1	0	0	0	3	3	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	42.00	42	8	3	0	0	1	3	0	0	0	0	27
..............................................................................................................................TATACAATGTGCTAGCTTTCT..................................................................................	21	1	34.00	34	1	33	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTA..............................................................................................................................	17	1	34.00	34	0	0	0	0	0	34	0	0	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	28.00	28	0	28	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	28.00	28	9	8	0	0	0	4	7	0	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	27.00	27	1	17	0	0	1	6	2	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	1	22.00	22	8	4	0	0	1	3	6	0	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	23	1	21.00	21	0	21	0	0	0	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	20.00	20	0	20	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	20.00	20	0	4	0	0	5	11	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	20.00	20	0	19	0	0	0	1	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATT............................................................................................................................	18	1	18.00	18	0	18	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAG.............................................................................................................................	18	1	12.00	12	5	1	0	0	3	1	2	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTTT........................................................................................................................	22	1	10.00	10	0	10	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTCA........................................................................................................................	23	1	10.00	10	0	1	0	0	0	2	7	0	0	0	0

droSec2

TAAAA-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AC-----CCC-AATCG----------A--ACTGCACCACTTAC-T	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	387183.00	387183	69404	167505	127	150147
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	89796.00	89796	21372	30981	23	37420
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	87438.00	87438	20052	39313	23	28050
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	18084.00	18084	1395	9880	5	6804
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	9587.00	9587	2518	4396	0	2673
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	7160.00	7160	752	2155	0	4253
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	5691.00	5691	514	2822	0	2355
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	4122.00	4122	3819	178	0	125
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	3452.00	3452	399	2066	0	987
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	2554.00	2554	471	37	1	2045
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	2333.00	2333	89	892	2	1350
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	2282.00	2282	401	786	2	1093
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	1628.00	1628	90	880	0	658
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1202.00	1202	1113	49	0	40
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	1150.00	1150	580	129	1	440
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	1144.00	1144	1079	27	0	38
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	1057.00	1057	983	35	0	39
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	1	835.00	835	135	450	1	249
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	731.00	731	172	367	0	192
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	728.00	728	118	309	0	301
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	574.00	574	42	285	2	245
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	361.00	361	25	195	1	140
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	328.00	328	115	50	0	163
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	1	292.00	292	15	125	0	152
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	287.00	287	9	141	0	137
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	231.00	231	168	24	0	39
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	209.00	209	32	52	0	125
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	180.00	180	23	88	0	69
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	141.00	141	134	4	0	3
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	123.00	123	98	14	0	11
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	120.00	120	10	69	0	41
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	114.00	114	22	39	0	53
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	111.00	111	12	42	0	57
......................................................................................TGAGGTAGTAGGTTGTATAGAT.........................................................................................................................	22	1	100.00	100	2	68	0	30
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	84.00	84	74	5	0	5
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	82.00	82	65	1	0	16
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	75.00	75	1	34	0	40
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	70.00	70	14	1	1	54
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	66.00	66	0	37	0	29
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	52.00	52	52	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	44.00	44	40	0	0	4
.............................................................................................................................CTATACAATGTGCTAGCTTT....................................................................................	20	1	43.00	43	14	9	0	20
......................................................................................TGAGGTAGTAGGTTGTATATA..........................................................................................................................	21	1	37.00	37	18	11	0	8
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	37.00	37	2	19	0	16
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	35.00	35	31	3	0	1
..............................................................................................................................TATACAATGTGCTAGCTTTCT..................................................................................	21	1	34.00	34	31	1	0	2
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	33.00	33	22	4	0	7
......................................................................................TGAGGTAGTAGGTTGTATAGTGA........................................................................................................................	23	1	29.00	29	1	12	0	16
......................................................................................TGAGGTAGTAGGTTGTATTC...........................................................................................................................	20	1	27.00	27	1	13	0	13
......................................................................................TGAGGTAGTAGGTTGTATCT...........................................................................................................................	20	1	27.00	27	2	14	0	11
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	26.00	26	21	3	0	2
......................................................................................TGAGGTAGTAGGTTGTATAGGT.........................................................................................................................	22	1	26.00	26	23	3	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTATA.......................................................................................................................	24	1	24.00	24	1	17	0	6
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	1	23.00	23	3	9	0	11
......................................................................................TGAGGTAGTAGGTTGTATAGTACA.......................................................................................................................	24	1	22.00	22	1	15	0	6
......................................................................................TGAGGTAGTAGGTTGTAGT............................................................................................................................	19	4	20.50	82	3	49	0	30
......................................................................................TGAGGTAGTAGGTTGTATAGTAAC.......................................................................................................................	24	1	20.00	20	3	12	0	5
......................................................................................TGAGGTAGTAGGTTGTAC.............................................................................................................................	18	1	19.00	19	0	0	0	19
......................................................................................TGAGGTAGTAGGTTGTATAGTAAG.......................................................................................................................	24	1	16.00	16	3	8	0	5
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	16.00	16	16	0	0	0

droSim2

TAAAA-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATTA--AAGA-AC-----CCC-AATCG----------A--ACTGCACCACTTAC-T	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	527515.00	527515	27574	20594	74	15420	4678	15424	84193	79527	253	93	6474	29	20354	252785	3	7	33
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	341932.00	341932	8063	8237	28	4892	1766	4289	55950	52365	88	21	4344	26	22365	179415	2	18	63
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	147099.00	147099	5433	3780	12	5686	5449	22551	13483	11937	56	14	2101	5	3063	73525	0	0	4
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	29842.00	29842	662	780	1	532	0	0	1287	727	179	87	71	0	2897	22619	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	27738.00	27738	269	408	1	414	0	0	3051	2828	9	4	402	3	2096	18245	0	5	3
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	13183.00	13183	2278	1199	5	221	1073	3922	650	499	1	0	908	1	74	2350	0	1	1
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	8520.00	8520	1401	451	4	128	1339	4215	198	182	2	3	157	1	18	421	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	4773.00	4773	36	93	0	86	0	0	659	573	3	0	13	0	153	3155	0	0	2
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	3294.00	3294	1348	1495	4	221	0	0	62	64	0	0	10	0	8	82	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	2538.00	2538	30	56	0	34	0	0	29	32	11	7	2	0	250	2087	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	2399.00	2399	357	295	1	135	0	0	303	197	0	0	66	0	55	990	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	2132.00	2132	1039	466	2	54	0	0	84	29	6	0	7	0	10	435	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	1879.00	1879	1089	645	0	10	0	0	34	36	0	0	16	0	7	42	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	1244.00	1244	12	14	0	848	42	86	23	23	0	1	20	0	12	162	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	1229.00	1229	66	114	0	32	0	0	92	91	7	0	25	0	87	714	1	0	0
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	789.00	789	62	41	0	47	0	0	57	38	0	0	23	0	17	504	0	0	0
......................................................................................TGAGGTAGTAGGTTGTA..............................................................................................................................	17	1	758.00	758	0	0	0	0	0	0	215	154	3	1	370	0	2	13	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	707.00	707	1	0	0	4	201	420	8	16	0	0	5	0	6	45	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	525.00	525	12	2	0	5	0	0	15	9	10	7	0	0	166	299	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	479.00	479	3	4	0	250	13	26	25	21	0	0	6	0	8	113	0	0	10
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	472.00	472	3	2	0	280	36	116	1	2	0	0	3	0	2	27	0	0	0
......................................................................................TGAGGTAGTAGGTTGT...............................................................................................................................	16	1	440.00	440	0	0	0	0	0	0	4	5	14	7	408	0	1	1	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	428.00	428	48	24	2	32	107	103	27	38	0	0	8	2	8	28	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	1	408.00	408	59	40	0	15	0	0	7	1	2	0	1	0	5	278	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	376.00	376	180	153	0	3	0	0	6	6	0	0	10	0	1	16	0	1	0
...........................................................................................TAGTAGGTTGTATAGT..........................................................................................................................	16	1	269.00	269	0	0	0	0	0	0	96	94	2	0	77	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	258.00	258	19	31	0	6	0	0	6	8	0	0	28	0	11	148	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	252.00	252	30	26	0	23	0	0	23	11	0	0	3	0	4	132	0	0	0
...........................................................................................TAGTAGGTTGTATAGTA.........................................................................................................................	17	1	232.00	232	0	0	0	0	0	0	87	90	0	0	55	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	221.00	221	87	38	0	1	0	0	4	17	0	0	9	0	10	55	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	177.00	177	11	13	0	7	0	1	8	23	0	0	114	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAC.............................................................................................................................	18	1	127.00	127	102	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	109.00	109	27	8	0	49	0	2	6	4	0	0	4	0	0	9	0	0	0
......................................................................................TGAGGTAGTAGGTTG................................................................................................................................	15	1	101.00	101	0	0	0	0	0	0	2	0	2	1	94	0	0	2	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTT.....................................................................................	19	1	95.00	95	0	0	0	0	36	58	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	94.00	94	8	5	0	1	0	0	14	13	0	0	52	0	0	0	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	79.00	79	46	20	0	0	0	0	2	2	0	0	3	0	0	6	0	0	0
............................................................................................AGTAGGTTGTATAGT..........................................................................................................................	15	1	77.00	77	0	0	0	0	0	0	5	11	0	0	61	0	0	0	0	0	0
............................................................................................AGTAGGTTGTATAGTA.........................................................................................................................	16	1	74.00	74	0	0	0	0	0	0	14	14	0	0	46	0	0	0	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCT......................................................................................	18	1	74.00	74	0	0	0	0	31	43	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	73.00	73	0	0	0	10	3	9	0	0	0	0	0	0	5	46	0	0	0
..........................................................................................GTAGTAGGTTGTATAGT..........................................................................................................................	17	1	70.00	70	0	0	0	0	0	0	0	3	0	0	67	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	65.00	65	43	19	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	63.00	63	13	15	0	6	0	0	2	0	0	0	1	0	1	25	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	62.00	62	6	2	0	4	16	29	2	2	0	0	1	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	61.00	61	0	0	0	30	0	0	1	0	0	0	0	0	2	28	0	0	0
..........................................................................................GTAGTAGGTTGTATAGTA.........................................................................................................................	18	1	59.00	59	0	4	0	0	0	2	2	5	1	0	45	0	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	53.00	53	11	1	0	9	0	0	7	15	0	0	7	0	0	3	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAAC.......................................................................................................................	24	1	46.00	46	28	11	3	0	0	0	0	1	0	0	1	0	1	1	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	45.00	45	1	0	0	15	7	17	0	1	0	0	2	0	0	2	0	0	0
.............................................................................................GTAGGTTGTATAGTA.........................................................................................................................	15	1	44.00	44	0	0	0	0	0	0	2	6	0	0	36	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	43.00	43	16	6	0	8	0	0	4	2	0	0	2	0	0	5	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	41.00	41	1	0	0	22	0	0	0	0	0	0	1	0	2	15	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	38.00	38	2	1	0	0	0	0	1	0	0	0	0	0	8	26	0	0	0
....................................................................TTTTTCTCTCTGGCAAAT...............................................................................................................................................	18	1	37.00	37	33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TAGTAGGTTGTATAG...........................................................................................................................	15	1	36.00	36	0	0	0	0	0	0	11	14	0	0	11	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	2	34.50	69	27	16	0	3	0	0	3	4	0	0	0	0	2	14	0	0	0
...........................................................................................TAGTAGGTTGTATAGTAA........................................................................................................................	18	2	31.00	62	0	0	0	0	0	0	18	34	1	0	9	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTATA.......................................................................................................................	24	1	31.00	31	1	2	0	1	0	0	0	0	0	0	0	0	0	27	0	0	0
.........................................................................................GGTAGTAGGTTGTATAG...........................................................................................................................	17	1	29.00	29	0	0	0	0	0	0	1	5	0	0	22	0	1	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	27.00	27	2	1	0	16	2	2	1	0	0	0	1	0	0	2	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATATA..........................................................................................................................	21	1	25.00	25	4	0	0	2	0	0	2	5	0	0	0	0	1	11	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAGT.......................................................................................................................	24	1	24.00	24	2	0	0	0	5	14	0	2	0	0	0	0	0	1	0	0	0
...................................................................CTTTTTCTCTCTGGCAAAT...............................................................................................................................................	19	1	24.00	24	19	4	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	23.00	23	6	4	0	2	0	0	0	0	0	0	2	0	0	9	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	22.00	22	0	0	0	16	0	5	0	0	0	0	0	0	0	1	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTGC........................................................................................................................	23	1	21.00	21	0	0	0	0	0	0	0	0	0	0	21	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGGT.........................................................................................................................	22	1	21.00	21	0	0	0	5	0	0	2	0	0	0	2	0	2	10	0	0	0

dm3

TAAAT-ACCAA---------AC---------------CACCTAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGATAA--AAGA-AT-----CCC-AATCG----------A--ACTGCACCACTTAA-T	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	15654942.00	15654942	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	10	20	29	118	0	4	0	533963	1601575	1821005	311354	636114	1737604	1793945	4	6	12	5	5	5	5	11	24	3	13	7	10	5	23	18	59	13	6	0	0	0	119	109	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	93	15	0	0	0	0	0	0	0	6	1	117	7	2	329	128	264	2	0	20	15	1143	20	5	0	19	0	43	90	18	0	5	1	14	178	1	209	18	1	18	0	15	8	18	0	278	46	193	211	119564	21242	20	24	0	0	1	2	0	113217	0	1	0	0	0	17	36	27	38	24	460	10	25	23	11	1	0	0	1	4	0	0	0	0	7	9	379	504	0	280	1344151	625359	72	734750	2011729	338115	1796454	517	11	670	146	0	0	5	0	0	243	81	93	418	62	1	0	0	142	0	296	82	0	3	1	0	0	5	32	13	0	35	19	1	0	0	0	0	159	818	442	1004	121	188	107	175	137	108	115	126	1	0	0	0	11	7	0	0	2	0	0	135	1012	38	3	0	2	222	510	0	281	5	0	2	1	1	756	2	0	1	0	0	19	238	0	0	0	287	1	1	0	0	117	676	34	145	103	647	49	452	1	2	2	123	1992	5571	4033	3418	6567	3	4	1265	934	12	822	198	521	136	305	2336	537	2253	3343	0	0	435	680	980	84	9	54	15	467	3498	2492	9	0	2721	1	6287	22956	9018	1437	3399	3332	3478	11	0	2	35	0	646
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	5151085.00	5151085	1	0	1	0	1485	300	0	5	1	0	62	16	97	0	335	8	2	38	100	0	469	717	1460	6042	0	117	51	45	265	484	8441	10057	73	83	12	1114	1813	1300	755	912	338	1317	3389	952	713	1481	2249	1296	2906	2344	5466	1400	616	0	0	0	290	310	150	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	192	203	158	125	2135	555	12	21	23	2	3	0	74	2054	297	5078	1861	180	11247	4697	12773	39	7	5072	3901	35495	896	48	313	961	89	1903	4734	1035	168	513	21	575	5924	82	7605	1463	72	1030	10	1156	872	3810	62	7842	573	6191	8013	6	11	1	3	39	136	5	4	0	7	12	38	15	53	63	2601	5213	3964	5826	4061	26810	1620	3341	3381	1793	0	1	0	0	0	30	31	22	13	37	38	15842	19759	0	14974	104	61	3938	13766	622	10084	348	21650	816	29226	8841	154	2	61	3	1	12304	3058	4047	22611	4580	194	44	23	7025	496	24851	5666	110	159	30	28	131	2109	6453	167	47	585	115	8	123	18	31	10	8129	37466	11209	22544	33167	27409	15535	24101	36890	32124	27730	39866	34	3	0	19	97	72	0	0	19	2	1	1450	48173	1342	98	4	57	12243	14085	35	13779	286	4	40	133	40	47920	230	17	193	130	5	968	13745	0	42	46	26415	61	42	0	3	14415	89693	9617	53343	12069	85764	6322	46524	11	22	252	5783	55250	196919	244788	108433	223257	70	197	68024	48195	228	27259	22206	63874	14943	39447	117512	58297	128167	132597	30	135	52630	85188	97917	4296	985	4430	1000	26714	117408	236656	610	86	115633	111	237917	606615	264136	56332	106846	141479	120288	513	9	150	2320	6	671
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	1591263.00	1591263	0	0	0	0	286	79	1	2	1	2	47	34	73	0	22	1	0	20	11	0	275	380	396	1056	0	32	19	109	297	446	2844	3870	69	59	0	522	1087	461	377	402	128	451	1552	530	276	731	878	810	1444	876	1995	773	262	0	0	0	228	200	135	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	28	38	25	346	217	7	20	11	2	2	2	227	1012	769	1176	729	234	1325	1024	2636	13	7	5699	6332	10320	269	16	255	712	9	862	2894	307	259	167	8	348	1982	172	1794	2380	19	2268	19	648	746	3633	57	1943	156	1816	1969	0	0	0	0	20	60	0	0	0	0	1	17	3	12	14	761	3094	1278	3009	1322	6115	721	1330	1488	738	0	0	0	0	0	7	6	3	5	24	5	4930	5686	0	4073	292	134	1189	4524	536	3094	349	5076	361	6590	568	11	2	9	2	0	3704	887	1337	9478	2145	277	33	33	1876	396	9272	1158	25	12	9	0	16	2003	3537	90	53	406	92	17	28	2	1	11	3347	8145	3005	5804	21160	8512	5991	8572	22447	6108	15938	16564	27	0	1	8	2574	1503	0	0	10	6	0	1827	7799	220	53	1	12	2680	2929	6	2715	70	1	13	47	11	6445	68	8	58	54	15	186	3431	0	6	36	13048	20	14	0	0	5294	33505	1295	7691	5226	37005	4252	30019	3	6	64	3298	13815	31647	47771	25189	49055	40	108	12292	8749	75	6466	14027	37949	8956	22062	25560	24350	31291	30596	11	44	25244	43495	43488	1392	631	1670	393	10596	34754	132797	190	23	43406	30	73461	175956	48852	9440	15007	34448	28741	191	5	37	935	1	27
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	1443865.00	1443865	0	0	0	0	739	69	0	0	1	0	7	1	6	0	49	2	0	20	9	0	118	166	507	4061	0	28	26	8	104	162	3241	4168	33	43	653	167	273	205	141	133	76	252	824	109	282	191	398	147	442	444	1321	224	124	0	0	0	2900	2501	1245	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	38	32	23	945	155	3	1	10	1	0	1	11	225	13	2167	181	18	8025	1657	2868	20	0	566	492	14674	406	34	38	289	35	437	967	287	9	153	14	129	2035	28	4974	377	49	220	1	482	149	449	12	4843	401	2979	4541	1	3	2	0	3	4	0	0	0	4	0	8	3	1	4	392	584	512	532	589	8957	165	314	379	207	0	1	0	3	0	6	23	10	4	12	21	5984	8129	0	5333	31	12	1608	5095	195	3606	136	11317	102	15580	460	14	3	24	0	0	5182	1234	1086	7649	819	26	0	0	2641	43	6753	1323	6	9	0	0	7	160	503	94	5	234	53	7	27	2	0	3	1100	12282	4344	9572	3195	3477	2712	4712	3314	3044	2957	2974	7	0	0	5	27	16	0	0	3	0	0	1888	15126	373	22	2	18	3713	5062	5	3590	38	2	6	12	5	8322	40	2	42	24	4	260	5164	0	17	18	3691	21	10	1	1	3530	22610	1567	9076	3278	23827	1659	12361	0	9	61	1897	30168	99622	104974	66738	128394	54	61	25129	18761	76	9139	2850	7952	1825	4611	30077	10428	40148	47609	3	21	6037	11018	15966	837	158	545	123	5598	34243	26665	74	8	19403	16	39123	155468	43546	9520	29889	22774	28429	99	1	32	294	0	2907
......................................................................................TGAGGTAGTAGGTTGTATAGTATC.......................................................................................................................	24	1	522807.00	522807	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	345871	176877	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	2	3	0	0	1	0	5	13	11	1	2	1	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	254285.00	254285	0	0	0	0	75	12	0	0	0	0	5	1	6	0	0	1	0	2	2	0	5	25	24	16	0	4	3	0	0	0	0	0	0	0	0	28	19	24	14	20	16	10	32	28	30	51	23	56	47	20	37	52	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	4	2	57	36	0	12	1	0	1	0	5	142	26	223	120	22	902	254	468	5	1	262	235	1058	52	6	24	77	17	74	214	70	22	35	2	31	390	5	252	37	6	22	1	23	25	116	2	300	16	245	281	0	0	0	0	0	1	0	0	0	0	0	0	2	10	2	43	179	69	152	45	594	53	72	40	39	0	0	0	0	0	6	0	0	0	0	0	647	858	0	536	6	1	166	487	13	264	12	655	0	953	21	0	0	2	1	0	414	359	81	1398	234	13	1	6	77	38	1452	127	1	0	0	1	1	298	377	16	5	32	7	0	0	0	0	0	167	857	337	608	945	587	353	513	966	495	879	750	5	0	0	2	1343	651	0	0	1	0	0	197	1402	45	7	0	1	242	399	4	361	16	0	0	8	3	1614	7	0	4	5	0	16	316	1	0	2	1160	5	1	1	0	713	4579	207	1178	532	3993	436	2949	0	1	13	522	1163	6345	8074	3749	6850	11	8	1690	1177	4	990	1221	3129	904	2176	4543	3205	5201	4696	0	8	1941	2999	3285	253	77	317	44	2289	4024	17499	39	4	12220	9	21172	45444	17930	2897	2476	8978	6858	31	1	13	171	1	1
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	240869.00	240869	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	0	1	0	0	3	8	4	78	0	0	0	5144	13134	31657	3089	9642	14232	14592	0	8	5	12	3	4	0	3	1	6	6	5	7	3	5	3	3	4	1	0	0	0	85	63	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	2	3	70	10	0	0	0	0	0	1	0	3	0	120	4	2	642	157	397	1	0	17	27	1067	51	7	0	15	2	25	91	33	0	16	2	8	192	1	269	9	5	10	0	1	7	11	0	402	102	339	387	272	53	11	9	0	0	0	0	0	393	0	0	0	0	0	11	15	9	11	8	304	1	1	5	1	1	0	0	2	6	0	0	0	0	0	11	421	1004	0	462	11722	5659	147	10446	34930	3214	14459	1296	72	1115	2940	13	0	3	0	0	576	47	48	173	27	1	0	0	118	0	282	30	0	2	0	0	0	0	13	4	0	28	2	0	0	0	0	0	28	119	268	438	41	46	77	94	35	28	28	31	1	0	0	0	0	0	0	0	0	0	0	79	649	18	1	0	1	124	413	0	184	1	0	0	2	0	253	1	0	0	1	1	28	168	0	2	1	167	3	1	0	0	74	519	30	202	40	386	38	258	0	0	2	99	2042	5217	4380	4097	7373	2	0	741	515	15	876	60	156	43	93	1332	176	1466	2107	0	1	171	227	510	8	0	3	1	9	392	110	1	0	507	2	1322	7237	2275	522	1617	781	1919	5	0	1	2	0	800
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	201612.00	201612	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6839	18859	28844	4039	10629	21265	21640	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	3	0	233	63	0	0	0	0	0	0	0	401	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	3	15470	7467	0	11360	30321	4191	19894	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	6	5	1	3	7	0	0	0	0	0	0	0	0	0	0	2	0	0	5	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	3	12	2	0	2	1	4	0	0	0	0	0	14
......................................................................................TGAGGTAGTAGGTTGTATAGATC........................................................................................................................	23	1	145827.00	145827	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	101277	44549	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	69522.00	69522	0	0	0	0	16	0	0	0	0	0	0	1	3	0	4	0	0	1	2	0	7	6	15	154	0	8	3	0	0	0	0	0	0	0	107	6	11	5	9	9	7	18	53	6	23	8	15	3	33	18	46	10	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	2	3	43	8	7	4	1	4	0	2	5	7	0	183	6	0	97	63	131	2	3	23	22	911	32	2	6	12	9	28	73	19	0	6	0	9	89	15	272	287	3	102	2	54	67	317	5	215	11	224	206	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	17	21	23	32	27	375	10	19	25	13	0	0	0	1	0	1	22	29	0	0	11	292	417	0	403	1	1	82	397	12	315	7	607	5	868	18	237	0	11	0	1	252	55	42	240	25	1	3	0	100	6	351	13	1	0	0	0	2	45	63	68	21	44	1	7	123	0	0	1	36	546	142	201	287	451	154	351	313	436	225	318	0	0	0	1	18	14	0	0	0	0	3	175	726	22	0	0	0	192	288	0	167	2	0	0	1	1	259	2	0	2	0	1	10	85	0	1	0	277	1	0	0	0	115	599	48	244	102	704	39	314	0	0	4	108	604	3589	3774	2376	4584	0	1	962	606	3	563	127	365	88	203	1711	642	2089	1967	0	1	250	451	555	24	9	23	12	247	804	1739	6	3	546	1	4868	9899	3701	475	861	1376	1335	9	1	1	40	0	65
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	44777.00	44777	0	0	0	0	84	12	0	0	0	0	5	1	1	0	1	0	0	1	1	0	2	2	11	11	0	2	1	0	0	0	0	0	0	0	0	0	4	3	1	0	1	7	31	1	8	1	8	3	13	16	39	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	69	1	0	0	0	0	0	0	2	1	0	162	1	0	25	6	37	0	0	1	4	51	55	0	1	2	0	2	6	2	0	3	0	3	36	2	60	16	0	15	0	9	22	116	2	75	3	33	65	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	4	5	7	10	8	111	3	1	7	5	0	0	0	0	0	0	0	0	0	3	0	133	176	0	108	0	0	26	106	2	77	4	280	4	436	34	0	0	0	0	0	89	16	17	105	18	0	0	0	33	0	119	8	0	2	0	0	0	5	17	6	0	2	0	0	0	0	0	0	30	257	158	220	51	68	37	145	73	58	38	66	0	0	0	0	1428	653	0	0	0	0	0	18	335	6	0	0	0	94	143	0	97	3	0	0	0	0	429	2	0	1	1	0	4	82	0	0	0	96	0	0	0	0	37	303	36	205	26	216	18	127	0	0	0	70	569	2041	1661	1027	1573	2	0	445	270	5	405	127	210	76	168	1061	297	1065	1285	0	0	138	196	300	40	4	9	3	155	702	930	6	2	1079	0	2755	9857	3167	697	922	1335	1398	3	0	2	6	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	38634.00	38634	0	0	0	0	13	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	3	4	4	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	1	0	0	4	5	3	1	1	9	4	2	5	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	3	17	0	6	0	0	0	0	0	7	3	27	4	4	80	42	93	0	0	16	14	256	12	0	2	6	0	14	33	13	0	5	0	5	93	1	63	7	1	5	0	5	4	17	0	37	1	24	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	21	10	21	6	103	5	4	12	2	0	0	0	0	0	1	0	0	0	0	0	67	88	0	92	0	0	33	81	2	40	3	147	0	201	0	17	0	0	0	0	82	69	9	153	12	0	0	0	5	2	214	11	0	2	1	0	1	13	21	0	0	2	0	0	0	0	0	0	17	105	25	51	181	221	70	125	189	142	128	181	1	0	0	0	385	216	0	0	0	0	0	15	295	10	1	0	0	55	103	0	54	0	0	0	0	1	165	1	0	1	1	0	0	23	0	0	0	138	0	2	0	0	60	436	20	91	37	413	52	387	0	0	3	57	222	1605	1420	988	1658	0	1	203	126	2	247	128	370	69	193	745	267	846	690	0	0	155	267	299	18	8	31	8	156	405	1635	4	0	608	0	4268	8073	3113	388	315	1094	933	1	1	1	30	0	0
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	25375.00	25375	0	0	0	0	55	2	0	0	0	0	0	1	4	0	1	0	0	0	1	0	0	4	3	8	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	1	2	0	2	1	2	1	1	1	1	2	6	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	21	3	0	0	0	0	0	0	0	1	0	59	1	0	72	11	29	1	0	2	4	162	7	1	3	16	0	8	3	1	0	1	0	1	50	0	50	4	1	1	0	7	0	2	0	60	4	34	47	15	1	0	0	0	0	0	0	0	8	0	0	0	0	0	1	4	2	3	0	63	1	0	1	2	0	0	0	0	0	0	0	0	1	0	0	85	113	0	60	10	2	25	39	18	28	19	135	0	153	2	0	0	0	0	0	85	6	12	50	8	0	0	0	13	0	38	10	0	0	0	0	0	1	6	3	0	3	0	0	0	0	0	0	10	113	26	71	14	12	6	5	11	13	8	11	0	0	0	0	7	10	0	0	0	0	0	35	264	9	1	0	0	47	147	0	68	1	0	0	0	0	178	1	0	0	0	0	2	55	0	1	0	52	0	0	0	0	15	104	7	36	12	91	5	63	0	0	0	40	185	1107	861	755	1578	0	0	159	121	4	166	33	56	18	37	553	167	458	649	0	0	34	67	108	18	6	6	3	168	384	457	1	1	663	1	2020	7320	1745	223	362	762	759	5	0	0	4	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	20722.00	20722	0	0	0	0	6	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	2	1	1	0	2	1	4	5	7	2	4	3	2	8	4	2	6	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	1	1	0	0	0	0	0	0	1	8	1	18	13	1	90	19	51	0	0	19	11	78	2	0	0	6	0	1	10	4	0	3	0	1	19	0	15	5	0	4	0	4	4	7	0	17	3	13	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	9	8	10	32	4	8	1	3	0	0	0	0	0	0	0	0	0	0	0	42	63	0	29	0	0	8	26	2	22	0	42	0	51	1	0	0	0	0	0	18	23	4	76	16	0	0	0	3	2	87	0	0	0	0	0	0	36	34	0	1	0	1	0	0	2	0	0	4	88	36	47	102	107	44	70	88	162	71	93	0	0	0	0	126	54	0	0	0	0	0	14	75	5	0	0	0	13	23	0	29	1	0	0	0	0	116	0	0	0	0	0	0	29	0	0	0	63	1	0	0	0	46	271	26	87	35	215	28	170	0	0	1	64	58	546	496	226	374	3	0	130	92	0	66	75	205	75	172	318	259	405	334	0	0	122	189	189	20	6	28	1	274	205	1300	2	0	1222	1	1787	4037	2163	329	189	643	573	2	0	0	11	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	19843.00	19843	0	0	0	0	20	5	0	0	0	0	1	0	3	0	5	3	1	0	1	0	3	5	16	148	0	0	0	110	169	327	85	163	7	10	0	17	34	47	4	15	9	17	62	22	13	30	20	27	34	59	51	40	9	0	0	0	23	9	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	1	1	26	2	0	0	0	0	0	0	7	23	41	64	29	3	126	79	146	0	0	208	160	400	11	0	20	24	0	66	141	22	10	10	0	20	84	2	86	63	0	22	0	9	11	22	0	19	5	57	31	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	8	58	36	23	21	145	39	48	45	31	0	0	0	0	0	0	0	4	0	0	0	332	799	0	271	270	128	46	188	361	97	190	348	651	218	267	0	0	0	0	0	180	40	22	28	12	16	0	0	30	0	18	10	0	0	0	0	0	11	30	0	0	1	0	0	0	0	0	0	47	109	13	13	327	101	404	276	308	110	292	299	1	0	0	0	0	0	0	0	0	1	1	73	29	4	25	2	0	97	205	1	114	7	0	0	4	1	10	3	1	1	2	5	19	99	0	3	8	1666	1	0	0	0	28	151	19	87	22	216	47	157	0	0	1	112	362	282	338	360	456	0	0	18	15	7	14	63	162	14	36	20	89	27	10	1	2	149	41	76	44	4	4	1	88	214	1575	2	0	266	1	63	289	87	46	142	46	143	9	0	0	15	0	29
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	19491.00	19491	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	7	9	0	1	0	0	0	0	0	0	0	0	1	0	0	2	0	2	1	2	2	0	4	0	0	0	1	4	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	7	0	0	18	7	30	0	0	0	1	33	1	0	0	1	0	0	9	3	0	0	0	0	9	1	68	4	0	2	0	3	1	2	0	41	1	24	49	42	10	0	1	0	0	0	0	0	56	0	0	0	0	0	1	0	0	1	2	30	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	38	79	0	35	483	163	15	610	732	139	544	117	2	138	8	0	0	0	0	0	34	5	6	23	3	0	0	0	17	0	20	0	0	0	0	0	0	4	2	0	0	6	0	0	0	0	0	0	3	33	29	41	6	30	14	16	13	52	7	10	0	0	0	0	0	1	0	0	0	0	0	12	132	3	0	0	0	15	165	1	40	1	0	0	0	0	22	0	0	0	1	0	2	15	0	1	0	23	1	1	0	0	11	47	3	15	14	54	5	22	0	0	1	10	255	756	342	584	1242	0	0	74	42	2	239	10	21	6	10	231	36	280	421	0	0	15	48	72	7	0	4	0	26	283	151	2	0	121	0	1380	5935	998	160	279	385	461	0	0	0	2	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATA............................................................................................................................	20	1	18482.00	18482	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	743	1818	2174	367	715	1984	2074	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1839	882	0	861	2460	409	2152	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	18030.00	18030	0	0	0	0	12	2	0	0	0	0	1	1	1	0	0	0	0	4	0	0	1	0	1	3	0	0	0	0	0	0	0	0	0	0	1	1	6	0	0	0	2	1	37	3	1	0	1	1	61	8	13	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	5	0	15	0	4	0	0	8	5	36	0	0	0	2	1	1	5	2	0	0	0	0	7	0	5	1	0	3	1	3	2	7	0	29	1	15	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	3	3	5	18	4	2	5	0	0	0	0	0	0	0	0	0	0	0	0	98	81	0	59	0	0	3	74	3	11	0	566	38	659	108	0	0	0	0	0	46	4	1	13	5	0	0	0	2	2	11	3	0	0	0	0	0	2	7	0	0	2	0	0	1	0	0	0	1	5	37	15	6	5	4	13	5	4	2	1	0	0	0	0	2	1	0	0	0	0	0	14	86	3	0	0	0	29	38	0	46	0	0	0	1	0	85	0	0	0	0	0	3	22	0	0	0	65	0	0	0	0	131	104	75	60	98	89	39	46	0	0	3	172	470	2523	4688	2069	240	0	0	131	97	0	609	89	54	103	60	738	373	981	734	0	0	3	12	11	2	0	1	0	7	24	55	0	0	20	0	65	213	47	15	15	32	25	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	15896.00	15896	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	6	0	0	5	3	5	0	0	0	0	18	1	0	0	6	0	0	0	1	0	1	0	0	3	0	5	0	0	0	0	0	0	0	0	4	1	10	11	77	20	2	1	0	0	0	0	0	109	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	16	0	5	1994	946	2	1797	6000	537	2598	27	0	25	13	0	0	0	0	0	6	0	3	2	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	10	0	2	0	0	0	3	0	1	0	0	0	0	2	0	0	0	0	0	0	2	12	0	0	0	0	2	13	0	0	0	0	0	0	0	7	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	4	0	2	4	16	0	0	0	0	0	5	22	144	95	122	210	0	0	6	11	0	40	0	2	1	0	43	5	33	56	0	0	0	4	5	0	0	0	0	1	3	2	0	0	8	0	100	343	103	16	49	27	73	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	15755.00	15755	0	0	0	0	23	5	0	0	0	0	2	2	2	0	7	0	0	0	0	0	0	2	0	16	0	0	0	0	0	0	0	0	0	0	0	0	6	2	1	5	1	2	7	0	0	0	7	1	3	5	5	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	3	0	0	0	0	0	0	1	4	0	22	0	1	32	4	29	0	0	6	6	55	8	0	4	2	0	4	8	1	0	2	0	4	19	0	20	5	0	3	0	3	2	7	0	19	1	12	14	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	8	7	5	4	44	7	8	9	3	0	0	0	0	0	0	0	0	0	0	0	93	100	0	63	0	0	19	27	0	19	1	97	15	195	50	1	0	0	0	0	85	6	5	46	12	3	0	0	17	0	38	8	0	0	1	0	1	0	12	0	0	1	0	0	0	0	0	0	15	74	40	77	12	5	1	16	11	10	7	16	0	0	0	0	10	5	0	0	0	0	0	0	109	3	1	0	0	29	40	0	37	2	0	1	0	0	83	0	0	0	0	0	4	19	0	0	0	51	0	0	0	0	75	796	41	273	43	494	18	217	0	0	4	92	337	878	1054	501	879	0	0	174	128	2	263	328	267	140	144	858	438	530	558	0	0	79	123	147	5	1	6	0	29	180	329	2	0	208	1	461	1245	474	115	208	279	219	0	0	0	4	0	1
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	12317.00	12317	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	191	43	0	0	0	0	0	0	0	202	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	7	3	0	0	0	0	0	0	4	3	0	1	1861	859	0	1326	2865	488	2506	8	0	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	3	0	0	1	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	4	0	1	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	3	0	0	0	1	0	0	0	0	0	0	6	17	14	15	27	0	0	2	0	0	1	0	0	0	0	9	0	8	9	0	0	0	0	1	0	0	0	0	0	5	5	0	0	6	0	11	96	12	3	8	5	7	0	0	0	0	0	1644
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	9686.00	9686	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	1	0	0	12	0	0	0	0	0	0	0	0	13	2	3	14	81	15	1	0	0	0	0	0	0	143	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	0	2	4345	474	0	494	1314	168	1997	0	1	4	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	36	27	0	0	0	0	0	0	17	0	0	0	0	0	5	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	1	7	0	1	0	0	0	0	8	28	9	7	59	0	0	8	7	0	2	11	1	5	1	63	11	19	21	0	0	0	1	0	0	0	0	0	1	8	2	0	0	4	0	22	124	23	3	5	8	11	0	0	0	0	0	5
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	8687.00	8687	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	11	7	0	1	1	0	0	0	0	0	0	0	3	0	6	0	3	0	0	7	1	0	3	0	3	1	1	2	11	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	0	0	0	0	1	6	3	0	50	2	5	0	0	0	0	34	0	0	0	1	0	0	3	1	0	1	0	0	14	2	26	1	1	2	0	0	1	0	0	441	24	1360	220	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	4	0	5	7	104	0	0	2	1	0	0	0	0	0	0	0	0	0	0	1	30	42	0	33	0	1	3	20	3	6	2	28	0	48	43	0	0	0	0	0	17	2	2	20	3	0	0	0	0	0	19	3	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	16	8	10	3	5	2	3	1	5	3	4	0	0	0	0	3	2	0	0	0	0	0	96	133	8	0	0	0	89	94	0	33	1	0	0	1	2	25	6	0	6	0	0	0	27	0	0	0	26	1	1	0	0	6	31	0	8	2	41	3	18	0	0	0	5	145	461	346	255	631	0	1	102	62	2	141	9	16	3	5	175	30	180	212	0	0	3	17	20	2	0	2	0	12	58	50	0	0	43	0	393	1240	296	52	73	80	98	1	0	0	0	0	0
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......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	2487.00	2487	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	102	123	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	3	1	1	14	2	7	0	0	0	0	7	0	0	0	1	0	1	0	0	0	0	0	0	4	0	9	6	0	3	0	1	1	10	0	3	0	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	2	3	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	6	10	0	10	0	0	3	7	1	9	0	10	0	19	1	0	0	0	0	0	14	1	1	5	0	0	0	0	0	1	14	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	3	4	5	6	15	22	9	10	17	8	10	14	0	0	0	0	0	1	0	0	0	0	0	0	24	1	0	0	0	2	6	0	5	1	0	0	0	0	18	0	0	0	0	0	0	2	0	0	0	14	0	0	0	0	4	43	4	23	4	25	6	31	0	0	1	1	18	165	159	83	129	0	0	22	17	0	14	7	24	3	12	37	22	55	45	0	0	15	16	16	1	0	0	0	13	22	153	0	0	40	0	85	309	71	12	18	38	39	0	0	1	1	0	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	2452.00	2452	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45	0	0	0	0	0	0	0	0	0	0	169	0	0	4	0	0	0	0	0	0	0	19	0	0	0	0	0	2	0	0	0	0	1	2	0	6	1	0	0	0	1	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	4	8	0	1	7	6	4	3	7	0	7	0	0	0	0	0	0	3	0	0	2	1	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	11	2	6	1	2	3	3	1	4	0	4	0	0	0	0	11	4	0	0	0	0	0	0	12	0	0	0	0	2	8	0	2	0	0	0	0	0	9	1	0	0	0	0	0	2	0	0	0	4	0	0	0	0	5	15	0	3	2	5	0	3	0	0	0	4	8	76	33	45	90	0	0	15	4	0	11	5	2	0	3	40	18	37	39	0	0	2	4	11	3	3	0	0	20	22	35	0	0	71	1	223	701	238	39	35	76	81	3	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	1	2083.00	2083	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	3	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	1	0	0	7	0	35	12	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	28	0	5	0	0	1	2	1	2	0	33	0	16	1	0	0	0	0	0	5	1	0	1	0	0	0	0	1	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	1	3	1	2	0	10	1	0	0	0	0	0	0	0	0	0	0	0	0	1	16	1	0	0	0	2	34	0	4	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	5	0	0	0	0	2	3	0	1	3	14	0	1	0	0	0	1	25	79	38	72	136	0	0	7	3	1	51	0	3	0	1	30	1	25	49	0	0	1	9	4	1	0	0	0	2	30	15	0	0	9	0	260	705	108	11	31	23	42	1	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1958.00	1958	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	1	2	4	22	26	1	1	0	0	0	2	0	0	0	2	2	0	0	0	1	0	1	1	0	1	0	0	0	0	2	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	2	0	2	0	2	2	1	0	0	9	11	4	0	0	5	2	0	2	6	1	0	0	0	0	0	0	5	10	0	7	0	3	2	6	0	12	0	11	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	2	6	2	8	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	14	22	0	10	2	1	2	32	5	24	2	22	3	25	0	0	0	0	0	0	15	0	0	11	2	0	0	0	1	0	5	0	0	0	0	0	0	0	2	0	0	5	0	0	0	0	0	1	5	6	2	10	20	8	11	6	11	4	18	18	0	0	0	0	7	1	0	0	0	0	0	3	3	0	0	0	0	0	2	0	1	0	0	0	0	0	6	0	0	0	0	0	0	3	0	0	0	19	0	0	0	0	23	111	2	11	7	55	5	32	0	0	0	5	28	25	41	24	57	0	0	11	7	1	3	18	57	6	25	20	37	33	32	0	0	42	47	68	2	0	0	2	12	32	152	0	0	21	0	65	155	29	4	5	21	27	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTATC.......................................................................................................................	23	1	1735.00	1735	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1347	388	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	1734.00	1734	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	1	2	28	25	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	13	9	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	11	2	3	0	0	1	4	3	0	0	0	0	0	0	4	0	0	0	0	0	4	1	11	0	0	0	0	3	2	0	0	31	2	15	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	46	0	20	0	0	10	29	3	30	1	74	0	126	15	0	0	0	0	0	35	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	1	0	0	0	0	0	0	1	9	2	15	1	3	4	6	0	0	6	1	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	3	1	0	2	0	0	0	0	0	8	0	0	0	0	0	0	3	0	0	0	4	0	0	0	0	8	73	3	8	6	23	2	11	0	0	0	1	31	71	62	55	122	0	0	33	14	0	8	5	10	2	7	15	8	27	39	0	0	6	10	17	0	0	0	1	4	15	16	0	0	13	0	27	93	32	3	29	22	15	0	0	0	0	0	48
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	1620.00	1620	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	1	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	3	1	5	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	9	14	0	10	0	0	0	22	0	20	1	4	2	21	94	0	0	0	0	0	7	1	1	8	2	0	0	0	5	0	1	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	6	2	2	1	0	3	0	1	0	0	1	1	1	3	0	0	0	0	0	0	0	0	0	6	0	0	0	0	1	3	0	2	0	0	0	0	0	7	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	55	297	1	11	4	30	4	14	0	0	0	2	24	84	126	70	150	0	0	13	3	0	10	2	10	1	5	8	3	6	16	0	0	0	14	7	0	0	0	0	3	11	15	0	0	11	0	23	186	38	8	19	15	13	0	0	0	0	0	0

droEug1

TAAAA-ACCAA---------AC---------------CACCCAGCAAAAAGGACTA-CACTAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCA--ATTGATTT--AA--ACT-----CCC-AATCG----------A--ACTGCACCGCCAAC-A	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TAAAC-ACCAA---------AC---------------CACCCAGCAAAAAGGACT--CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCACA--ATTGATTT--AA--ACT-----CCC-AATC-----------A--GCTGCACCACCAAC-T	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TAAAA-ACCAA---------AA---------------TACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGATTA--AA--ACT-----CCC-AATCG----------A--ATTGCACAACCAAC-T	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTAAA-ACCAA---------AC---------CA---CCACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACT-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGCTTT--AA--ACT-----CCC-TATCG----------A--TCTGCACCATCAAC-A	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TAAAA-ACCAA---------AC---------CA---CCACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGATTA--AA--ACT-----CCC-AATCG----------A--AGTGCACCACCAAC-A	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TAAAA-ACCAA---------AC---------------CACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGATTA--AA--ACT-----CCC-AATCG----------A--ACTTCACCGCCAACCA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TAATTTACCAA---------AA---------AAT--CCACCCAGCAAAAGGGACTA-AACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA-ATTTAATCC--AAGA-AA---------------------------------CCAC------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TCACG-ACCTA---------AC---------------CACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGATTT--GAAA-ATCCCCCCCC-AATGG----------A--G----------TTC-T	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	194721.00	194721	79135	25	7	20833	45428	49293
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	82378.00	82378	45353	6	8	9532	12710	14769
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	41037.00	41037	20099	4	2	3169	7801	9962
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	10511.00	10511	6297	0	0	841	1909	1464
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	5088.00	5088	1228	3	7	267	1302	2281
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	5008.00	5008	4663	61	1	27	150	106
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	4344.00	4344	1712	0	0	422	1081	1129
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	3561.00	3561	2020	0	0	768	109	664
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	3310.00	3310	807	0	0	260	1235	1008
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	3101.00	3101	1790	1	0	300	641	369
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	2684.00	2684	2625	1	0	10	27	21
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	1869.00	1869	778	0	0	115	446	530
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1477.00	1477	1350	0	0	7	74	46
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	1253.00	1253	826	0	0	72	235	120
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	759.00	759	161	0	1	77	185	335
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	758.00	758	168	0	0	90	209	291
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	667.00	667	302	0	0	14	14	337
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	570.00	570	43	6	0	100	250	171
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	519.00	519	158	0	0	27	106	228
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	434.00	434	86	5	6	15	110	212
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	380.00	380	366	0	0	3	5	6
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	324.00	324	35	0	0	59	180	50
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	300.00	300	249	37	0	0	8	6
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	238.00	238	102	0	0	29	26	81
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	167.00	167	158	0	0	3	2	4
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	152.00	152	46	0	0	38	31	37
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	8	149.88	1199	668	0	0	127	290	114
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	141.00	141	69	0	0	4	3	65
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	120.00	120	117	0	0	0	3	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	110.00	110	85	0	0	1	13	11
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	103.00	103	51	0	0	9	11	32
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	102.00	102	68	15	0	6	8	5
.......................................................................................GAGGTAGTAGGTTGTATT............................................................................................................................	18	1	102.00	102	100	0	0	0	1	1
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	92.00	92	87	0	0	0	2	3
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	88.00	88	27	0	0	4	28	29
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	1	80.00	80	34	0	0	8	24	14
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	71.00	71	69	1	0	0	1	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	70.00	70	11	0	0	1	21	37
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	63.00	63	59	0	0	1	1	2
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	56.00	56	50	0	0	0	3	3
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	55.00	55	15	0	1	16	8	15
......................................................................................TGAGGTAGTAGGTTGTATAGTATT.......................................................................................................................	24	1	48.00	48	23	0	0	4	10	11
......................................................................................TGAGGTAGTAGGTTGTATAGAT.........................................................................................................................	22	1	41.00	41	6	0	0	1	29	5
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	37.00	37	15	0	0	15	1	6
......................................................................................TGAGGTAGTAGGTTGTA..............................................................................................................................	17	1	36.00	36	0	0	0	36	0	0
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	36.00	36	12	0	0	11	6	7
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	1	32.00	32	13	0	0	1	6	12
......................................................................................TGAGGTAGTAGGTTGTAG.............................................................................................................................	18	1	32.00	32	11	0	0	7	5	9
......................................................................................TGAGGTAGTAGGTTGTATAGTAAT.......................................................................................................................	24	1	30.00	30	8	0	0	1	11	10
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	29.00	29	29	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	26.00	26	6	0	0	1	4	15
......................................................................................TGAGGTAGTAGGTTGTATAGCT.........................................................................................................................	22	1	23.00	23	1	0	0	3	12	7
......................................................................................TGAGGTAGTAGGTTGTAGT............................................................................................................................	19	2	21.00	42	6	0	0	5	12	19
........................................................................................AGGTAGTAGGTTGTATAGTT.........................................................................................................................	20	1	21.00	21	19	0	0	2	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTTT........................................................................................................................	22	3	20.67	62	58	0	0	0	3	1
.......................................................................................GAGGTAGTAGGTTGTATAGC..........................................................................................................................	20	1	20.00	20	3	17	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	19.00	19	14	0	0	4	1	0
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	19.00	19	4	0	0	3	5	7
..............................................................................................................................TATACAATGTGCTAGCTTTCT..................................................................................	21	1	18.00	18	11	0	0	0	0	7
......................................................................................TGAGGTAGTAGGTTGTATAGTGT........................................................................................................................	23	1	18.00	18	10	0	0	0	4	4
......................................................................................TGAGGTAGTAGGTTGTATAGTTTT.......................................................................................................................	24	3	18.00	54	43	0	0	2	6	3
......................................................................................TGAGGTAGTAGGTTGTATCT...........................................................................................................................	20	1	18.00	18	3	0	0	2	6	7
.....................................................................................TTGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	23	1	17.00	17	17	0	0	0	0	0

droBip1

TCACG-ACCTA---------AC---------------CACCCAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGATTTCAAATA-TT-C---CCC-AATGG----------AGTTCTACATAAATATG-T	Size	Hit Count	Total Norm	Total
No Reads

dp5

AAAAC-CGCAA---------AC---------CATAA--GCCCAACAAAAAGGACCAGCACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGAACA--GCCC-AGCCC--CCCGCCCCA----------A--ACAGCTCC-CGTAC-G	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	170482.00	170482	200	72531	24	8335	35	34312	43151	3420	6748	1726
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	125585.00	125585	59	58624	1	1718	4	20653	18622	4594	20656	654
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	52007.00	52007	44	19069	3	1315	19	5918	10177	3509	6045	5908
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	9557.00	9557	10	4433	1	586	0	1354	1614	290	1199	70
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	5607.00	5607	1	5312	12	57	0	88	126	4	6	1
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	5413.00	5413	16	2511	0	109	0	851	1269	105	527	25
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	4006.00	4006	1	888	0	21	1	441	1939	220	375	120
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	3892.00	3892	0	3808	0	2	0	23	30	4	23	2
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	3136.00	3136	8	2156	0	59	0	695	20	43	149	6
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	2190.00	2190	1	704	0	40	0	274	513	132	519	7
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	1919.00	1919	4	1333	0	59	0	242	272	0	9	0
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1593.00	1593	1	1440	0	9	0	43	86	1	8	5
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	1474.00	1474	2	42	1	1243	0	107	78	0	1	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	1088.00	1088	0	281	0	16	0	112	417	57	196	9
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	995.00	995	1	421	0	51	0	104	193	35	189	1
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	625.00	625	0	195	0	7	0	111	281	6	24	1
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	1	590.00	590	0	373	0	20	0	65	126	0	6	0
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	576.00	576	0	556	5	7	0	4	2	0	2	0
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	394.00	394	0	329	2	26	0	19	16	0	1	1
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	350.00	350	0	96	0	13	0	126	97	2	16	0
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	333.00	333	0	306	3	4	0	0	6	4	9	1
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	290.00	290	0	60	0	3	0	28	172	4	22	1
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	282.00	282	0	273	0	3	0	0	6	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	260.00	260	1	86	0	56	1	66	46	1	2	1
...............................................................................................................................ATACAATGTGCTAGCTTTCT..................................................................................	20	1	199.00	199	0	199	0	0	0	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	183.00	183	0	179	0	0	0	4	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	145.00	145	0	143	1	0	0	1	0	0	0	0
.................................................................................................................................ACAATGTGCTAGCTTTCT..................................................................................	18	1	141.00	141	0	141	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	124.00	124	3	48	0	20	0	42	8	0	3	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	108.00	108	0	76	0	1	0	6	25	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	102.00	102	0	43	0	1	0	39	18	0	0	1
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	95.00	95	0	90	0	1	0	3	1	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	86.00	86	0	15	0	2	0	8	9	11	36	5
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	85.00	85	0	64	0	8	0	7	6	0	0	0
................................................................................................................................TACAATGTGCTAGCTTTCT..................................................................................	19	1	85.00	85	0	82	2	1	0	0	0	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	84.00	84	0	83	0	0	0	0	0	0	1	0
.......................................................................................GAGGTAGTAGGTTGTATT............................................................................................................................	18	1	83.00	83	0	82	0	1	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	68.00	68	0	22	0	0	0	10	20	3	13	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	57.00	57	1	23	0	3	0	4	23	0	3	0
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	54.00	54	0	53	0	0	0	0	0	1	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	52.00	52	0	50	0	0	0	0	2	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	48.00	48	0	23	0	11	0	8	6	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	42.00	42	0	13	0	0	0	9	18	0	2	0
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	41.00	41	0	5	0	17	0	8	10	0	1	0
..............................................................................................................................TATACAATGTGCTAGCTTTCT..................................................................................	21	1	35.00	35	0	35	0	0	0	0	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	27.00	27	0	19	0	1	0	0	1	0	4	2
......................................................................................TGAGGTAGTAGGTTGTATAGAT.........................................................................................................................	22	1	26.00	26	0	2	0	1	0	2	12	5	3	1
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	26.00	26	0	17	0	1	0	6	1	1	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	26.00	26	0	5	0	0	0	2	14	2	1	2
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	1	26.00	26	0	5	0	6	0	3	8	3	1	0
.......................................................................................GAGGTAGTAGGTTGTATAGTTT........................................................................................................................	22	1	25.00	25	0	24	0	0	0	0	0	0	1	0
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	2	24.50	49	0	26	0	1	0	6	16	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	24.00	24	0	18	0	0	0	3	3	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATCC...........................................................................................................................	20	1	23.00	23	0	5	0	1	0	9	8	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTCC........................................................................................................................	23	1	23.00	23	0	2	0	8	0	10	3	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTT....................................................................................	20	1	21.00	21	0	21	0	0	0	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGTT.........................................................................................................................	20	1	19.00	19	0	19	0	0	0	0	0	0	0	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	23	1	17.00	17	0	17	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAC.............................................................................................................................	18	1	14.00	14	0	3	0	11	0	0	0	0	0	0
.............................................................................................................................CTATACAATGTGCTAGCTTTCC..................................................................................	22	1	13.00	13	0	5	1	7	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAA...........................................................................................................................	19	1	13.00	13	0	12	0	0	0	1	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATCT...........................................................................................................................	20	1	12.00	12	0	5	0	0	0	2	5	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	12.00	12	0	7	0	1	0	3	0	1	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTGT........................................................................................................................	23	1	11.00	11	0	1	0	0	0	5	4	1	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGC..........................................................................................................................	20	1	10.00	10	0	1	6	3	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAGTA......................................................................................................................	25	1	10.00	10	0	2	0	0	0	2	3	0	1	2
..........................................................................................GTAGTAGGTTGTATAGTA.........................................................................................................................	18	1	10.00	10	0	10	0	0	0	0	0	0	0	0

droPer2

AAAAC-CGCAA---------AC---------CATAA--GCCCAACAAAAAGGACCAGCACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGA-------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	2	81173.00	162346	47	21721	2	42738	30829	67009
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	2	41876.00	83752	8	12557	1	25788	19470	25928
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	2	17891.00	35782	19	5560	2	7297	5692	17212
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	2	3102.50	6205	0	1255	0	1313	1188	2449
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	2	2285.50	4571	0	322	0	585	741	2923
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	2	1770.50	3541	0	1443	0	283	341	1474
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	2	1668.00	3336	4	480	0	1033	936	883
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	2	1250.50	2501	3	408	0	933	1029	128
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	2	968.00	1936	0	502	0	191	198	1045
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	2	803.00	1606	0	133	0	303	323	847
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	2	564.00	1128	0	757	0	83	77	211
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	2	403.50	807	0	88	0	118	143	458
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	2	384.00	768	1	173	0	212	205	177
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	2	284.50	569	0	92	0	84	111	282
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	2	247.00	494	0	40	0	126	159	169
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	2	202.50	405	0	20	1	42	66	276
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	2	181.00	362	0	43	0	128	142	49
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	2	174.00	348	0	38	0	25	42	243
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	2	160.50	321	1	9	0	97	144	70
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	2	103.00	206	4	11	0	47	56	88
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	2	78.00	156	0	91	0	11	11	43
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	2	76.00	152	0	60	0	25	60	7
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	2	75.00	150	0	30	0	37	41	42
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	2	74.00	148	0	27	0	56	42	23
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	2	66.50	133	4	16	0	39	64	10
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	2	40.00	80	0	59	0	8	8	5
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	2	38.00	76	0	2	0	36	35	3
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	2	30.50	61	0	10	0	14	16	21
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	2	30.00	60	0	6	0	7	11	36
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	2	27.00	54	0	1	0	11	9	33
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	2	25.50	51	0	12	0	15	6	18
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	2	24.00	48	0	34	0	5	3	6
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	2	22.50	45	0	20	0	5	3	17
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	2	20.00	40	0	33	0	1	2	4
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	2	19.00	38	0	27	0	3	2	6
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	2	18.50	37	0	2	0	7	13	15
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	2	17.50	35	0	2	0	1	2	30
......................................................................................TGAGGTAGTAGGTTGTAGT............................................................................................................................	19	2	15.50	31	0	1	0	0	0	30
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	2	14.50	29	0	6	0	6	17	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	2	13.50	27	0	4	0	9	11	3
.......................................................................................GAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	23	2	11.50	23	0	4	0	1	1	17
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	2	11.50	23	0	2	0	8	6	7
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	2	11.00	22	0	8	0	1	0	13
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	2	8.50	17	0	16	0	0	1	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAGT.......................................................................................................................	24	2	7.50	15	0	2	0	2	4	7
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	2	7.50	15	0	0	0	2	5	8
......................................................................................TGAGGTAGTAGGTTGTATAGAT.........................................................................................................................	22	2	7.50	15	0	1	0	4	4	6

droWil2

TAAAA-CCTCA---------AT---------------TAAA-TGCAAAAAGGACTACTTAAAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTATTCAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACAGATATGATCT--A---------------AATAG----------A------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	597905.00	597905	52851	57359	28485	1476	457734
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	129865.00	129865	11037	30726	8923	610	78569
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	114016.00	114016	12231	14924	5766	397	80698
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	23305.00	23305	277	1175	1042	1002	19809
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	13863.00	13863	3637	1188	666	23	8349
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	7285.00	7285	491	638	494	47	5615
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	6436.00	6436	1581	1527	78	15	3235
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	4806.00	4806	657	1292	369	14	2474
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	3809.00	3809	20	3336	18	2	433
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	3256.00	3256	857	634	225	2	1538
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	2717.00	2717	85	153	72	673	1734
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	2683.00	2683	73	297	169	8	2136
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	2297.00	2297	2170	29	4	0	94
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	2293.00	2293	1314	35	53	0	891
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	1930.00	1930	2	1834	8	1	85
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	1905.00	1905	30	112	132	21	1610
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	999.00	999	4	935	3	0	57
.............................................................................................................................CTATACAATGTGCTAGCTTTCT..................................................................................	22	1	968.00	968	53	186	3	10	716
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	761.00	761	247	42	15	0	457
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	726.00	726	198	30	16	7	475
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	1	724.00	724	21	135	59	0	509
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	646.00	646	119	61	22	1	443
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	456.00	456	16	61	35	4	340
......................................................................................TGAGGTAGTAGGTTGTATCC...........................................................................................................................	20	1	351.00	351	15	27	7	0	302
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	322.00	322	33	119	22	1	147
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	256.00	256	38	160	6	0	52
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	226.00	226	21	26	8	2	169
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	1	210.00	210	23	16	9	0	162
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	203.00	203	13	15	7	13	155
......................................................................................TGAGGTAGTAGGTTGTATAGTCC........................................................................................................................	23	1	185.00	185	8	31	1	0	145
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	157.00	157	2	13	2	1	139
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	144.00	144	26	69	2	0	47
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	119.00	119	32	6	4	0	77
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	105.00	105	4	90	0	0	11
......................................................................................TGAGGTAGTAGGTTGTATCCC..........................................................................................................................	21	1	97.00	97	3	6	2	0	86
......................................................................................TGAGGTAGTAGGTTGTATCT...........................................................................................................................	20	1	91.00	91	14	10	1	0	66
......................................................................................TGAGGTAGTAGGTTGTATAGTCCC.......................................................................................................................	24	1	91.00	91	3	13	1	0	74
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	81.00	81	0	57	0	0	24
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	80.00	80	1	72	0	0	7
.............................................................................................................................CTATACAATGTGCTAGCTTTC...................................................................................	21	1	75.00	75	6	16	1	0	52
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	61.00	61	1	56	2	0	2
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	59.00	59	1	53	0	0	5
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	1	58.00	58	14	11	3	0	30
......................................................................................TGAGGTAGTAGGTTGTAGT............................................................................................................................	19	4	57.75	231	1	7	17	0	206
......................................................................................TGAGGTAGTAGGTTGTATAGTTCC.......................................................................................................................	24	1	55.00	55	13	4	1	0	37
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	52.00	52	0	46	0	0	6
......................................................................................TGAGGTAGTAGGTTGTAC.............................................................................................................................	18	1	50.00	50	46	1	0	0	3
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	2	49.50	99	12	11	6	0	70
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	48.00	48	0	42	0	0	6
......................................................................................TGAGGTAGTAGGTTGTATAGTATC.......................................................................................................................	24	1	46.00	46	17	5	0	0	24
.......................................................................................GAGGTAGTAGGTTGTATT............................................................................................................................	18	1	44.00	44	0	43	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATAGTAAC.......................................................................................................................	24	1	40.00	40	6	1	0	4	29
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	38.00	38	2	8	4	0	24
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	34.00	34	0	34	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	2	32.50	65	14	20	3	1	27
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	30.00	30	4	16	1	0	9
......................................................................................TGAGGTAGTAGGTTGTATAGAT.........................................................................................................................	22	1	29.00	29	0	0	4	0	25
......................................................................................TGAGGTAGTAGGTTGTATATA..........................................................................................................................	21	1	29.00	29	0	4	1	0	24
......................................................................................TGAGGTAGTAGGTTGTATTC...........................................................................................................................	20	1	27.00	27	0	2	0	0	25
..........................................................................................GTAGTAGGTTGTATAGTA.........................................................................................................................	18	1	24.00	24	2	13	0	0	9
......................................................................................TGAGGTAGTAGGTTGTATAGTAAG.......................................................................................................................	24	1	21.00	21	2	0	0	2	17
......................................................................................TGAGGTAGTAGGTTGTATAGTCA........................................................................................................................	23	1	20.00	20	0	2	1	1	16

droVir3

CAAAA-ACAAA--------CAGCAGGCAAGCTAAAA--G---GACAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATTTATA-GAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--A----------AGA-AA-----ACC-AACCC--------------CCCCATCCCTCTC-T	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	386682.00	386682	1489	6557	42409	7	2168	4850	1853	7152	3643	17007	1809	4	26	19	2922	1654	1168	2636	1134	480	4823	408	11671	4358	4224	4067	7476	5510	19331	25812	9130	27979	22	4393	23	17	24	18	727	5054	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	533	3	17	37902	68444	134	1376	2455	76	65	22	7712	8747	5477	5194	6881	6117	16	381	390	288	395
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	175154.00	175154	519	2259	13323	4	1180	1866	535	4952	2723	7287	1258	2	4	5	1541	922	722	1621	684	358	1947	327	3262	1660	2745	2696	4735	4314	9444	12434	4668	15352	7	2044	11	2	9	3	356	2253	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	71	1	7	5883	18714	36	1055	1323	3	6	1	6864	9290	3011	6378	5221	6929	1	91	88	54	89
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	134169.00	134169	327	1690	16486	2	557	2049	395	1225	322	3744	254	0	5	2	3793	2211	1366	3364	1778	691	2283	754	4792	1294	775	701	1423	955	9706	11611	4744	12871	8	1763	13	5	11	2	152	2160	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	62	0	2	16958	16515	21	53	482	33	31	13	574	769	431	377	534	412	10	153	159	135	161
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	74129.00	74129	1535	1587	2842	3	328	1862	203	16	78	8454	116	0	3	1	132	152	34	90	100	41	2697	63	662	458	180	224	342	266	6397	7843	2863	9563	0	2724	2	0	0	0	74	2935	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	119	0	3	509	5964	0	71	72	5	3	0	1555	2423	1644	1874	2660	2285	1	22	24	13	11
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	25479.00	25479	26	99	908	0	115	345	47	505	321	1134	167	4	13	6	555	260	192	529	187	179	452	130	1115	147	363	374	760	566	1528	1792	712	2391	30	476	1	27	11	16	97	462	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	7	960	5108	6	179	138	41	32	7	310	476	145	299	231	259	5	58	88	42	40
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	8140.00	8140	65	735	719	0	51	152	19	423	55	432	55	0	0	0	123	67	53	132	54	27	94	22	190	111	38	39	64	33	320	413	218	440	0	90	0	0	0	0	7	106	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	969	1068	0	12	21	0	1	0	100	216	60	118	89	112	0	8	2	2	4
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	7523.00	7523	5	34	460	0	18	115	7	64	36	288	19	1	0	0	132	66	48	168	60	42	168	31	443	21	61	62	148	84	592	837	263	886	3	212	1	2	0	2	25	186	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	406	1222	0	58	66	6	5	1	28	35	20	12	11	23	1	7	11	6	10
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	7321.00	7321	34	171	1109	1	19	60	6	49	16	170	8	0	0	0	157	86	72	181	85	45	87	40	386	34	64	52	71	64	344	548	189	611	2	102	1	1	0	0	18	72	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	5	0	690	1145	0	47	78	0	0	0	70	100	47	56	41	50	1	7	10	3	4
......................................................................................TGAGGTAGTAGGTTGTATAGTCC........................................................................................................................	23	1	4731.00	4731	82	18	116	0	18	138	4	0	1	201	1	0	0	0	6	6	0	0	4	3	233	2	25	27	4	11	12	10	313	474	218	617	0	307	0	0	0	0	5	303	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0	0	19	339	0	6	3	0	0	0	158	220	196	98	277	203	0	3	3	2	2
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	4719.00	4719	49	287	707	1	13	44	13	46	26	115	13	0	0	0	45	29	24	74	24	12	50	10	246	52	30	23	64	37	224	422	158	379	0	53	1	0	0	0	10	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	1085	79	1	0	5	0	1	0	23	62	26	29	44	32	0	2	2	3	6
.............................................................................................................................CTATACAGCGTGCTAGCTTTCT..................................................................................	22	1	3811.00	3811	1	3	178	0	172	132	170	2	13	6	3	0	0	0	199	75	45	105	131	52	275	170	117	217	86	79	110	76	151	86	52	150	0	142	2	0	0	0	305	224	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	83	92	0	28	55	0	0	0	5	4	7	3	3	1	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	3321.00	3321	0	2	3120	6	1	2	0	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	6	0	7	4	3	2	13	29	10	16	0	4	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	46	0	0	0	0	0	0	1	1	0	1	3	1	0	0	1	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	3169.00	3169	17	116	364	1	6	47	7	207	20	262	15	0	0	0	25	22	16	23	8	1	48	3	77	15	16	11	16	2	96	114	43	100	0	20	0	0	0	0	5	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	389	856	0	12	11	4	4	3	14	42	9	15	18	16	2	3	9	5	6
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	2534.00	2534	4	31	96	0	7	18	1	53	22	79	15	1	26	3	33	13	9	31	9	17	17	7	79	5	27	21	63	38	88	97	48	159	21	21	1	31	9	15	8	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	60	462	0	56	7	64	71	10	66	99	15	48	44	53	7	66	66	43	44
......................................................................................TGAGGTAGTAGGTTGTATAGTCT........................................................................................................................	23	1	2178.00	2178	7	22	87	0	5	63	2	1	3	182	2	0	0	0	3	3	1	4	0	1	102	0	14	7	9	11	12	7	222	299	104	374	0	133	0	0	0	0	0	107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	15	142	0	4	13	1	0	1	29	40	24	26	47	36	0	3	3	0	0
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	1346.00	1346	1	18	72	0	3	27	3	38	7	45	4	0	1	0	39	26	9	46	21	9	18	8	57	12	6	4	6	12	56	61	35	73	0	11	0	0	1	0	2	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	214	353	0	0	1	1	0	0	4	11	0	1	5	5	0	0	1	0	1
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	1158.00	1158	23	32	20	0	2	29	4	39	16	55	8	0	0	0	8	5	1	8	2	1	27	3	17	4	7	6	7	9	27	50	23	59	0	20	0	0	0	0	2	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	16	58	0	0	0	0	0	0	92	138	50	62	76	128	0	0	1	0	1
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	1128.00	1128	0	0	1064	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	1	2	1	0	1	1	3	8	3	9	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	10	0	1	2	0	0	0	0	0	1	0	0	0	0	1	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	1008.00	1008	0	0	918	0	0	1	0	2	2	4	2	0	0	0	0	1	0	0	1	0	0	0	2	1	0	1	2	4	5	3	2	15	0	1	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	9	0	4	0	0	0	0	4	7	0	3	5	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	922.00	922	35	252	13	1	1	10	7	18	1	25	5	0	0	0	6	9	6	5	5	1	37	6	23	9	4	5	5	4	20	21	15	41	0	7	1	0	0	0	1	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	215	81	0	1	5	0	0	0	2	4	0	1	3	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	1	857.00	857	5	11	15	0	5	18	3	0	0	91	0	0	0	0	4	1	0	3	4	2	34	0	4	1	1	0	1	1	71	122	42	165	0	90	0	0	0	0	2	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	61	0	2	0	0	0	0	4	6	0	14	7	4	0	0	0	1	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	817.00	817	5	8	120	0	2	4	0	1	0	11	1	0	0	0	25	20	12	34	14	10	9	4	74	3	9	0	11	6	32	58	23	48	0	10	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	78	144	0	5	6	0	0	0	7	3	0	2	3	2	0	2	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	774.00	774	117	474	11	0	0	0	0	17	1	11	4	0	0	0	0	1	0	0	0	0	8	0	2	3	0	0	0	0	4	1	0	2	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	58	30	0	3	2	0	0	0	7	4	5	1	2	3	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	683.00	683	9	129	131	0	1	3	0	5	1	13	0	0	0	0	5	6	1	8	6	0	4	2	5	4	2	1	1	1	11	23	9	23	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	130	108	0	0	1	0	0	0	5	9	5	5	6	2	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	588.00	588	44	51	45	0	1	13	2	0	0	29	4	0	0	0	5	4	3	2	2	0	6	2	13	4	3	1	2	2	20	60	15	27	0	14	0	0	0	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	20	94	0	0	2	0	1	0	6	14	5	24	20	4	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTCA........................................................................................................................	23	1	509.00	509	0	0	37	0	4	6	0	0	0	3	1	0	0	0	4	0	2	3	0	0	33	0	13	4	4	8	13	4	51	72	18	92	0	21	0	0	1	0	3	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	47	0	4	3	1	2	0	2	3	6	4	3	0	0	1	1	0	1
......................................................................................TGAGGTAGTAGGTTGTATCC...........................................................................................................................	20	1	380.00	380	5	3	28	0	2	8	1	0	1	39	1	0	0	0	4	2	0	1	4	0	10	2	3	6	2	2	3	1	17	39	8	28	0	14	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	8	63	0	0	0	0	0	0	8	10	7	11	9	13	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	373.00	373	1	3	34	0	1	5	2	2	2	22	0	0	0	0	5	8	5	12	6	4	6	4	17	6	0	1	0	0	9	20	8	20	0	14	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	76	66	0	0	0	0	0	0	0	1	1	1	4	1	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	368.00	368	0	3	307	0	1	1	0	3	2	5	0	0	0	0	0	0	0	0	0	0	3	0	2	2	1	0	1	2	5	12	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	10	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	347.00	347	0	2	203	0	5	8	2	23	5	36	3	0	0	0	0	0	0	0	0	0	3	0	1	3	1	0	2	1	2	3	3	5	0	7	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	1	0	3	3	0	0	0	6	1	1	0	0	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	256.00	256	0	2	29	0	1	2	0	4	2	8	0	0	1	0	2	1	0	2	1	2	3	0	8	1	3	4	4	6	19	26	8	26	1	3	0	1	1	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	32	0	1	2	1	0	0	5	3	0	5	3	2	0	0	1	2	0
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	238.00	238	3	5	28	0	2	5	7	13	2	12	1	0	0	0	3	2	2	4	0	0	7	0	5	4	1	0	2	0	8	3	1	8	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	47	34	0	2	1	0	0	0	1	3	1	4	2	8	0	1	1	0	0
.............................................................................................................................CTATACAGCGTGCTAGCTTTC...................................................................................	21	1	236.00	236	0	0	17	0	4	3	11	0	1	0	0	0	0	0	11	6	2	8	9	1	22	8	8	14	5	3	1	1	8	4	7	13	0	9	0	0	0	0	14	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	15	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTC.........................................................................................................................	21	1	230.00	230	0	0	191	0	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0	0	6	0	0	1	0	0	0	0	5	8	1	5	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	155.00	155	1	6	3	0	0	0	0	6	2	11	4	0	0	0	3	2	2	3	1	1	2	0	6	1	0	1	4	2	5	6	1	5	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	20	42	0	0	3	2	0	0	1	0	0	0	0	3	1	0	1	1	0
......................................................................................TGAGGTAGTAGGTTGTA..............................................................................................................................	17	1	131.00	131	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0	0	99	0	0	1	5	1	0	0	0	0	0	0	0	0	0	2	0	3	2
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	127.00	127	1	11	4	0	0	1	1	0	0	0	2	0	0	0	2	1	0	1	0	0	5	0	4	1	0	0	0	0	1	5	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	61	5	0	0	0	0	0	0	1	5	0	1	5	3	0	0	0	0	1
......................................................................................TGAGGTAGTAGGTTGTATAGTAAC.......................................................................................................................	24	1	127.00	127	6	3	1	0	0	0	0	1	1	0	0	0	0	0	3	0	0	1	0	0	1	0	2	0	0	0	1	1	1	2	2	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	6	0	0	0	1	0	0	10	26	6	10	11	20	0	3	0	1	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	102.00	102	0	5	7	0	0	0	0	0	0	3	0	0	0	0	2	1	2	3	1	0	3	0	10	0	0	0	0	0	3	9	1	5	0	7	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	25	0	0	0	0	0	0	1	0	2	1	0	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGCC.........................................................................................................................	22	1	93.00	93	3	0	2	0	0	2	0	1	0	11	1	0	0	0	0	0	0	0	0	1	19	0	1	1	0	0	0	0	2	6	4	8	0	7	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	6	8	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	91.00	91	0	2	68	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	2	0	0	1	0	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	84.00	84	0	0	79	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	81.00	81	1	1	8	0	0	7	0	7	9	15	3	0	0	0	0	0	0	0	0	0	3	0	0	1	1	1	2	0	0	2	1	1	0	2	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	2	0	3	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	80.00	80	1	1	51	0	1	1	1	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	2	5	1	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	79.00	79	0	0	68	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGTC.........................................................................................................................	19	1	76.00	76	0	0	0	0	1	7	0	0	0	45	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	3	1	0	0	4	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTATC.......................................................................................................................	24	1	76.00	76	3	4	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	0	0	0	0	0	5	7	4	7	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	4	2	1	4	8	8	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	72.00	72	1	0	62	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	2	61.00	122	1	3	27	0	0	2	0	1	0	0	0	0	0	0	4	2	2	3	1	0	0	1	7	0	0	0	0	0	1	2	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	24	31	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	59.00	59	0	0	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................TAGTAGGTTGTATAGTAA........................................................................................................................	18	1	57.00	57	0	0	0	0	0	1	3	12	6	15	3	0	0	0	0	0	0	1	1	0	4	0	0	0	0	0	0	0	0	0	0	2	0	5	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................GTAGTAGGTTGTATAGTA.........................................................................................................................	18	1	56.00	56	0	0	7	0	1	6	1	9	0	1	0	0	0	0	0	0	0	2	0	0	4	0	0	1	0	0	1	0	1	6	2	2	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	3	0	0	2	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTATA.......................................................................................................................	24	1	49.00	49	0	4	2	0	0	0	0	0	0	1	0	0	0	0	1	0	3	0	1	0	2	0	2	0	0	0	0	0	6	1	1	3	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	0	0	0	0	2	0	4	1	0	1	0	0	0	0	0	2	2
......................................................................................TGAGGTAGTAGGTTGTATCT...........................................................................................................................	20	1	49.00	49	0	1	9	0	0	0	0	1	0	7	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	3	1	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	12	0	0	0	0	0	0	1	0	1	0	1	3	0	0	0	0	0
.............................................................................................................................CTATACAGCGTGCTAGCTTT....................................................................................	20	1	45.00	45	0	0	8	0	2	0	1	0	0	0	0	0	0	0	3	0	3	2	1	0	1	1	0	2	0	1	0	0	4	1	0	6	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTC...........................................................................................................................	20	1	43.00	43	1	0	2	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	2	3	1	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	11	0	0	0	0	0	0	2	0	2	1	2	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGAC.........................................................................................................................	22	1	42.00	42	4	8	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	2	0	2	2	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	0	0	0	0	0	0	1	0	0	2	1	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	41.00	41	0	2	7	0	0	0	0	0	0	0	0	0	0	0	3	1	2	1	0	0	0	0	2	0	0	0	0	0	7	1	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..........................................................................................GTAGTAGGTTGTATAGTC.........................................................................................................................	18	1	41.00	41	2	0	1	0	0	1	0	0	0	14	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	2	5	0	3	0	5	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................TATACAGCGTGCTAGCTTTCT..................................................................................	21	1	41.00	41	0	0	13	0	0	0	1	0	0	0	0	0	0	0	3	0	0	2	2	0	2	0	1	0	0	1	1	0	1	1	0	0	0	3	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	37.00	37	0	0	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	1	36.00	36	1	3	6	0	1	2	0	1	0	1	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	10	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTCAA.......................................................................................................................	24	1	35.00	35	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	2	1	0	3	3	0	2	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	5	2	2	0	1	1	1	0	1	0	0
.............................................................................................................................CTATACAGCGTGCTAGCTTTCTC.................................................................................	23	1	33.00	33	0	0	1	0	1	3	0	0	0	0	0	0	0	0	0	0	0	2	0	0	5	0	1	2	0	0	0	0	4	3	2	2	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TAAAA-ACCAACTGACATAAACC--------------AAGCAAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTTATA-GACCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACTATAAGCCGCA--A----------AGACAT-----CCC-ACACA----------C--ACTCGCCCAGCCAT-A	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	1	315102.00	315102	127424	32	26854	32343	47	128402
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	1	90378.00	90378	43801	11	10994	12201	5	23366
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	1	86171.00	86171	35430	103	5923	7500	89	37126
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	1	40845.00	40845	11191	1	1462	1921	10	26260
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	1	13754.00	13754	2317	6	865	1266	2	9298
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	1	8445.00	8445	8213	0	16	19	69	128
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	1	7954.00	7954	3691	1	626	830	0	2806
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	1	4426.00	4426	1396	0	478	598	1	1953
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	1	4017.00	4017	947	0	302	457	1	2310
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	1	3283.00	3283	1226	0	750	930	0	377
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	1	2570.00	2570	2531	0	9	6	1	23
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	1	2447.00	2447	728	0	228	306	0	1185
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	1	2311.00	2311	2264	0	4	6	0	37
......................................................................................TGAGGTAGTAGGTTGTATAGTCT........................................................................................................................	23	1	1519.00	1519	457	0	38	77	0	947
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	1	1512.00	1512	397	0	95	153	9	858
......................................................................................TGAGGTAGTAGGTTGTATAGTCA........................................................................................................................	23	1	1311.00	1311	371	0	80	87	0	773
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	1	1112.00	1112	188	0	60	63	0	801
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	1	983.00	983	125	2	60	106	0	690
......................................................................................TGAGGTAGTAGGTTGTATAGTCC........................................................................................................................	23	1	947.00	947	287	0	50	43	0	567
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	1	946.00	946	279	0	133	169	0	365
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	1	779.00	779	135	1	21	30	0	592
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	1	753.00	753	137	0	102	104	0	410
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	1	705.00	705	242	0	59	84	0	320
.......................................................................................GAGGTAGTAGGTTGTATAGTC.........................................................................................................................	21	1	673.00	673	635	0	2	2	0	34
.............................................................................................................................CTATACAGCGTGCTAGCTTTCT..................................................................................	22	1	640.00	640	260	6	107	133	25	109
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	1	626.00	626	115	0	246	95	0	170
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	1	562.00	562	512	0	4	2	26	18
......................................................................................TGAGGTAGTAGGTTGTATAGTCTC.......................................................................................................................	24	1	443.00	443	81	0	14	26	0	322
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	1	314.00	314	76	0	22	25	0	191
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	1	263.00	263	87	1	54	45	0	76
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	1	257.00	257	203	0	7	5	27	15
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	1	224.00	224	221	0	0	0	0	3
......................................................................................TGAGGTAGTAGGTTGTATAGTATC.......................................................................................................................	24	1	206.00	206	29	0	4	5	0	168
......................................................................................TGAGGTAGTAGGTTGTATCC...........................................................................................................................	20	1	191.00	191	37	0	12	16	0	126
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	1	172.00	172	159	0	0	2	0	11
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	1	141.00	141	47	0	40	42	0	12
......................................................................................TGAGGTAGTAGGTTGTATCT...........................................................................................................................	20	1	134.00	134	23	0	8	8	0	95
......................................................................................TGAGGTAGTAGGTTGTATAGCC.........................................................................................................................	22	1	131.00	131	52	0	7	20	0	52
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	1	115.00	115	115	0	0	0	0	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	1	110.00	110	107	0	0	3	0	0
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	1	102.00	102	95	0	0	1	1	5
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	1	95.00	95	37	0	15	12	0	31
......................................................................................TGAGGTAGTAGGTTGTATTC...........................................................................................................................	20	1	94.00	94	11	0	2	9	0	72
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	1	93.00	93	25	0	15	10	0	43
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	3	85.00	255	62	0	29	44	0	120
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	1	82.00	82	79	0	1	0	1	1
.............................................................................................................................CTATACAGCGTGCTAGCTTTC...................................................................................	21	1	81.00	81	26	0	17	14	4	20
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	1	73.00	73	13	0	5	9	1	45
......................................................................................TGAGGTAGTAGGTTGTATAGTCAA.......................................................................................................................	24	1	61.00	61	8	0	6	3	0	44
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	1	58.00	58	55	0	0	1	0	2
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	1	55.00	55	8	0	9	12	0	26
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	1	52.00	52	49	0	1	1	0	1
......................................................................................TGAGGTAGTAGGTTGTATCA...........................................................................................................................	20	1	47.00	47	9	0	5	2	0	31
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	1	44.00	44	44	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	1	43.00	43	10	0	12	16	0	5
......................................................................................TGAGGTAGTAGGTTGTATATC..........................................................................................................................	21	1	41.00	41	10	0	4	7	0	20
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	1	41.00	41	12	0	3	4	0	22
......................................................................................TGAGGTAGTAGGTTGTATAGTTTC.......................................................................................................................	24	1	40.00	40	9	0	1	0	0	30
.......................................................................................GAGGTAGTAGGTTGTATAGC..........................................................................................................................	20	1	40.00	40	28	0	0	0	11	1
.......................................................................................GAGGTAGTAGGTTGTATAGTCT........................................................................................................................	22	1	31.00	31	31	0	0	0	0	0
......................................................................................TGAGGTAGTAGGTTGTATAGTCCC.......................................................................................................................	24	1	31.00	31	6	0	3	2	0	20
......................................................................................TGAGGTAGTAGGTTGTA..............................................................................................................................	17	1	30.00	30	0	0	0	30	0	0
........................................................................................AGGTAGTAGGTTGTATAGTC.........................................................................................................................	20	1	30.00	30	28	0	0	1	0	1
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	1	27.00	27	2	0	3	4	0	18
.....................................................................................TTGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	23	1	27.00	27	27	0	0	0	0	0
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	1	27.00	27	21	0	0	2	0	4
......................................................................................TGAGGTAGTAGGTTGTATAGTGA........................................................................................................................	23	1	26.00	26	2	0	6	4	0	14
.............................................................................................................................CTATACAGCGTGCTAGCTTTCTC.................................................................................	23	1	26.00	26	7	1	1	1	11	5
......................................................................................TGAGGTAGTAGGTTGTATAGCT.........................................................................................................................	22	1	24.00	24	3	0	2	4	0	15
......................................................................................TGAGGTAGTAGGTTGTATAGTATCC......................................................................................................................	25	1	24.00	24	8	0	1	2	0	13
.............................................................................................................................CTATACAGCGTGCTAGCTTT....................................................................................	20	1	23.00	23	9	0	1	6	1	6
..............................................................................................................................TATACAGCGTGCTAGCTTTCT..................................................................................	21	1	22.00	22	20	0	1	0	0	1

droGri2

AAAAA-ACAAA--------AAC---------------CAGCAAGCAAAAAGGACTA-CACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATC-TAGCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCA--TA-GAACG--AA--ACC-----CTC-TCACACACTGAAAAAA--AAAACACCACTGAA-T	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
......................................................................................TGAGGTAGTAGGTTGTATAGT..........................................................................................................................	21	2	16453.00	32906	18826	14080
......................................................................................TGAGGTAGTAGGTTGTATAG...........................................................................................................................	20	2	10239.50	20479	13693	6786
......................................................................................TGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	22	2	2998.00	5996	3361	2635
......................................................................................TGAGGTAGTAGGTTGTATAGTT.........................................................................................................................	22	2	1223.50	2447	1681	766
.......................................................................................GAGGTAGTAGGTTGTATAGT..........................................................................................................................	20	2	642.00	1284	1273	11
......................................................................................TGAGGTAGTAGGTTGTATA............................................................................................................................	19	2	547.50	1095	606	489
.......................................................................................GAGGTAGTAGGTTGTATAG...........................................................................................................................	19	2	446.00	892	888	4
......................................................................................TGAGGTAGTAGGTTGTATAGTAA........................................................................................................................	23	2	336.00	672	135	537
......................................................................................TGAGGTAGTAGGTTGTATAGA..........................................................................................................................	21	2	287.00	574	209	365
......................................................................................TGAGGTAGTAGGTTGTATAGTAT........................................................................................................................	23	2	239.00	478	207	271
......................................................................................TGAGGTAGTAGGTTGTAT.............................................................................................................................	18	2	210.00	420	379	41
......................................................................................TGAGGTAGTAGGTTGTATAGTTT........................................................................................................................	23	2	141.50	283	201	82
.......................................................................................GAGGTAGTAGGTTGTATAGTA.........................................................................................................................	21	2	118.00	236	233	3
......................................................................................TGAGGTAGTAGGTTGTATT............................................................................................................................	19	2	81.00	162	89	73
.......................................................................................GAGGTAGTAGGTTGTATAGTT.........................................................................................................................	21	2	61.00	122	122	0
......................................................................................TGAGGTAGTAGGTTGTATAA...........................................................................................................................	20	2	56.00	112	22	90
........................................................................................AGGTAGTAGGTTGTATAGT..........................................................................................................................	19	2	38.00	76	75	1
.............................................................................................................................CTATACAGCTTGCTAGCTTTCT..................................................................................	22	2	33.00	66	63	3
......................................................................................TGAGGTAGTAGGTTGTATAGTAAA.......................................................................................................................	24	2	28.50	57	6	51
......................................................................................TGAGGTAGTAGGTTGTATAT...........................................................................................................................	20	2	28.50	57	18	39
......................................................................................TGAGGTAGTAGGTTGTATAGTG.........................................................................................................................	22	2	22.00	44	33	11
......................................................................................TGAGGTAGTAGGTTGTATAGC..........................................................................................................................	21	2	20.50	41	16	25
......................................................................................TGAGGTAGTAGGTTGTATAGTC.........................................................................................................................	22	2	18.50	37	11	26
......................................................................................TGAGGTAGTAGGTTGTATAGG..........................................................................................................................	21	2	18.00	36	32	4
.......................................................................................GAGGTAGTAGGTTGTATA............................................................................................................................	18	2	16.00	32	32	0
........................................................................................AGGTAGTAGGTTGTATAG...........................................................................................................................	18	2	15.50	31	31	0
......................................................................................TGAGGTAGTAGGTTGTATTT...........................................................................................................................	20	2	15.00	30	17	13
.........................................................................................GGTAGTAGGTTGTATAGT..........................................................................................................................	18	2	14.50	29	29	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	22	2	11.00	22	22	0
......................................................................................TGAGGTAGTAGGTTGTATAGTAC........................................................................................................................	23	2	10.00	20	7	13
.....................................................................................TTGAGGTAGTAGGTTGTATAG...........................................................................................................................	21	2	9.50	19	19	0
......................................................................................TGAGGTAGTAGGTTGTATAGAT.........................................................................................................................	22	2	8.50	17	5	12
......................................................................................TGAGGTAGTAGGTTGTATAGTTA........................................................................................................................	23	2	8.50	17	11	6
.......................................................................................GAGGTAGTAGGTTGTATAGTAT........................................................................................................................	22	2	8.00	16	16	0
.......................................................................................GAGGTAGTAGGTTGTATAGTTT........................................................................................................................	22	2	8.00	16	16	0
.......................................................................................GAGGTAGTAGGTTGTATAGA..........................................................................................................................	20	2	7.50	15	14	1
......................................................................................TGAGGTAGTAGGTTGTATAAA..........................................................................................................................	21	2	6.50	13	3	10
.............................................................................................................................CTATACAGCTTGCTAGCTTTC...................................................................................	21	2	4.50	9	9	0
......................................................................................TGAGGTAGTAGGTTGTATC............................................................................................................................	19	2	4.00	8	1	7
.......................................................................................GAGGTAGTAGGTTGTATAGTAA........................................................................................................................	22	2	4.00	8	8	0
......................................................................................TGAGGTAGTAGGTTGTATAC...........................................................................................................................	20	2	4.00	8	2	6
......................................................................................TGAGGTAGTAGGTTGTATAGTAG........................................................................................................................	23	2	4.00	8	6	2
.......................................................................................GAGGTAGTAGGTTGTATT............................................................................................................................	18	2	3.50	7	7	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTAA.......................................................................................................................	24	2	3.00	6	2	4
........................................................................................AGGTAGTAGGTTGTATAGTA.........................................................................................................................	20	2	3.00	6	6	0
........................................................................................AGGTAGTAGGTTGTATAGTT.........................................................................................................................	20	2	2.50	5	5	0
......................................................................................TGAGGTAGTAGGTTGTATAGTTC........................................................................................................................	23	2	2.50	5	3	2
......................................................................................TGAGGTAGTAGGTTGTATAGGC.........................................................................................................................	22	2	2.50	5	5	0
......................................................................................TGAGGTAGTAGGTTGTATAGTACA.......................................................................................................................	24	2	2.00	4	1	3
..............................................................................................................................TATACAGCTTGCTAGCTTTCT..................................................................................	21	2	2.00	4	4	0
....................................................................................ATTGAGGTAGTAGGTTGTATAGT..........................................................................................................................	23	2	2.00	4	4	0
.....................................................................................TTGAGGTAGTAGGTTGTATAGTA.........................................................................................................................	23	2	2.00	4	4	0
......................................................................................TGAGGTAGTAGGTTGTAGT............................................................................................................................	19	2	2.00	4	0	4
......................................................................................TGAGGTAGTAGGTTGTATAGTGA........................................................................................................................	23	2	1.50	3	1	2
......................................................................................TGAGGTAGTAGGTTGTATTA...........................................................................................................................	20	2	1.50	3	1	2
......................................................................................TGAGGTAGTAGGTTGTATAGTCA........................................................................................................................	23	2	1.50	3	1	2
......................................................................................TGAGGTAGTAGGTTGTATAGTCT........................................................................................................................	23	2	1.50	3	3	0
.......................................................................................GAGGTAGTAGGTTGTATAT...........................................................................................................................	19	2	1.50	3	3	0
.......................................................................................GAGGTAGTAGGTTGTATAGTG.........................................................................................................................	21	2	1.50	3	3	0
......................................................................................TGAGGTAGTAGGTTGTATAGGCA........................................................................................................................	23	2	1.50	3	3	0
......................................................................................TGAGGTAGTAGGTTGTATAGGG.........................................................................................................................	22	2	1.50	3	3	0
......................................................................................TGAGGTAGTAGGTTGTATG............................................................................................................................	19	2	1.00	2	0	2
....................................................................................ATTGAGGTAGTAGGTTGTATAG...........................................................................................................................	22	2	1.00	2	2	0
......................................................................................TGAGGTAGTAGGTTGTATCC...........................................................................................................................	20	2	1.00	2	0	2
.......................................................................................GAGGTAGTAGGTTGTATAGTAG........................................................................................................................	22	2	1.00	2	2	0
......................................................................................TGAGGTAGTAGGTTGTATATG..........................................................................................................................	21	2	1.00	2	2	0
......................................................................................TGAGGTAGTAGGTTGTATAGGGA........................................................................................................................	23	2	1.00	2	2	0
.........................................................................................GGTAGTAGGTTGTATAGTA.........................................................................................................................	19	2	1.00	2	2	0
......................................................................................TGAGGTAGTAGGTTGTAAT............................................................................................................................	19	2	1.00	2	0	2
......................................................................................TGAGGTAGTAGGTTGTAA.............................................................................................................................	18	2	1.00	2	0	2

der-let-7

scaffold_4845:5799416-5799493 -

Known

Unknown

5pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads