ID:

der-bantam

 Coordinate:

scaffold_4784:648344-648424 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.0 -26.0 -26.0

Flybase annnotation

pre_miRNA [Dere\bantam-RM]; utr5 [utr5_plus_6230]; miRNA [Dere\bantam-RA]

No Repeatable elements found

Sense Strand Reads

TCGAAAGAGGAAAAACGGATAGCGGACGAAAAGCGTTTGTAACTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACATTCCACATTCCGATGGTCGATTTTTGTTGCTTGCTGTGC

*************************************************.........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...........****************************************** 		Read size # Mismatch Hit Count Total Norm Total V107

male body		 V108

head

 M055

female body

 M057

embryo

 GSM1528801

follicle cells		 V040

embryo

 V060

head
.....................................................................................................TGAGATCATTTTGAAAGCTGATT......................................................... 23 0 1 2184195.00 2184195 746087 377810 558765 326927 100330 30376 43900
.....................................................................................................TGAGATCATTTTGAAAGCTGAT.......................................................... 22 0 1 1247814.00 1247814 516287 485129 134725 45040 772 39528 26333
.....................................................................................................TTAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 114159.00 114159 7013 2801 2378 101815 50 90 12
.....................................................................................................TGAGATCATTTTGAAAGCTGATTT........................................................ 24 0 1 95954.00 95954 17455 47072 21934 3905 2714 600 2274
.....................................................................................................TGAGATCATTTTGAAAGCTGA........................................................... 21 0 1 53527.00 53527 20544 14112 14365 2109 116 202 2079
......................................................................................................GAGATCATTTTGAAAGCTGATT......................................................... 22 0 1 29569.00 29569 44 127 28897 389 90 7 15
.....................................................................................................TTAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 23557.00 23557 4973 3902 681 13875 0 115 11
................................................................CCGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 0 1 22023.00 22023 4206 3133 4781 6153 2606 723 421
.....................................................................................................TGAGATCATTTTGAAAGCTGATC......................................................... 23 1 1 14892.00 14892 503 4302 309 9587 94 53 44
.....................................................................................................TGATATCATTTTGAAAGCTGATT......................................................... 23 1 1 8623.00 8623 424 2061 1251 4719 61 89 18
.....................................................................................................TGAGATCATTTTGAAAGCTG............................................................ 20 0 1 8182.00 8182 3583 2066 2083 22 99 40 289
.....................................................................................................TGAGATCATTTTGAAAGCTGATA......................................................... 23 1 1 7730.00 7730 1595 3450 2039 316 204 39 87
......................................................................................................GAGATCATTTTGAAAGCTGAT.......................................................... 21 0 1 7102.00 7102 32 127 6897 25 7 8 6
.....................................................................................................TGAGATAATTTTGAAAGCTGATT......................................................... 23 1 1 6034.00 6034 157 2590 3018 101 65 38 65
.....................................................................................................TGAGATCATTTTGAAAGCTGATTA........................................................ 24 1 1 5918.00 5918 1948 818 1915 257 842 37 101
.....................................................................................................TGAGATCATTTTGAAAGCTTATT......................................................... 23 1 1 5116.00 5116 554 2497 1190 236 54 462 123
.....................................................................................................TGAGATCATTTTGGAAGCTGATT......................................................... 23 1 1 4924.00 4924 383 333 186 87 3823 55 57
.....................................................................................................TGAGATCATTTTGAAATCTGATT......................................................... 23 1 1 4537.00 4537 429 1618 1289 338 69 501 293
.....................................................................................................TGAGATAATTTTGAAAGCTGAT.......................................................... 22 1 1 4378.00 4378 101 3432 756 7 1 42 39
.....................................................................................................TGAGATCATTTTGAAAGCTGGTT......................................................... 23 1 1 4364.00 4364 298 253 3331 329 6 76 71
.....................................................................................................TGAGATCATTTTGAAAGCT............................................................. 19 0 1 4239.00 4239 2026 1447 357 89 19 169 132
.....................................................................................................TGAGATCATTTTGAAAGCTTAT.......................................................... 22 1 1 3917.00 3917 182 2632 355 32 0 653 63
.....................................................................................................TGAGATCATTTTAAAAGCTGATT......................................................... 23 1 1 3866.00 3866 815 531 1897 526 25 30 42
.....................................................................................................TGATATCATTTTGAAAGCTGAT.......................................................... 22 1 1 3830.00 3830 201 2523 294 691 0 119 2
.....................................................................................................TGAGATCATTTTGAAAGATGATT......................................................... 23 1 1 3748.00 3748 161 1903 1378 33 133 47 93
.....................................................................................................TGAGATCATTTTTAAAGCTGAT.......................................................... 22 1 1 3687.00 3687 174 2573 158 4 1 680 97
.....................................................................................................TGAGATCATTTTTAAAGCTGATT......................................................... 23 1 1 3627.00 3627 302 1884 660 32 38 552 159
.....................................................................................................TGAGATCCTTTTGAAAGCTGATT......................................................... 23 1 1 3578.00 3578 245 298 469 1637 864 35 30
.....................................................................................................TGAGATCATTTTGAAATCTGAT.......................................................... 22 1 1 3377.00 3377 227 1971 287 105 0 603 184
.....................................................................................................TGAGATCATTTTGCAAGCTGATT......................................................... 23 1 1 3303.00 3303 117 214 30 3 2812 54 73
.....................................................................................................TGAGATCATTTTGAAAGATGAT.......................................................... 22 1 1 3266.00 3266 107 2678 382 4 0 51 44
.....................................................................................................TTAGATCATTTTGAAAGCTGATC......................................................... 23 2 1 2864.00 2864 4 40 2 2816 0 2 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATG......................................................... 23 1 1 2606.00 2606 53 2056 158 306 3 22 8
.....................................................................................................TAAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 2597.00 2597 229 159 348 1765 6 62 28
.....................................................................................................TGAGATCATTTTGAAAGCTGAC.......................................................... 22 1 1 2456.00 2456 222 444 74 1653 0 40 23
....................................................................................................ATGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 2421.00 2421 0 3 282 4 2132 0 0
.....................................................................................................TGGGATCATTTTGAAAGCTGATT......................................................... 23 1 1 2406.00 2406 871 604 566 196 13 76 80
.....................................................................................................TGCGATCATTTTGAAAGCTGATT......................................................... 23 1 1 2380.00 2380 255 522 22 1423 114 25 19
................................................................CCGGTTTTCGATTTGGTTTGAC............................................................................................... 22 0 1 2360.00 2360 544 503 708 447 58 37 63
.....................................................................................................CGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 2298.00 2298 543 419 735 500 5 53 43
.....................................................................................................GGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 2217.00 2217 781 132 666 573 10 40 15
.....................................................................................................TCAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 2168.00 2168 222 161 102 1631 4 36 12
.....................................................................................................TGAGATCATTTTGAAACCTGATT......................................................... 23 1 1 2084.00 2084 432 403 908 205 42 59 35
.................................................................CGGTTTTCGATTTGGTTTGACT.............................................................................................. 22 0 1 2047.00 2047 184 405 630 549 120 119 40
.....................................................................................................TGAGATCGTTTTGAAAGCTGATT......................................................... 23 1 1 1933.00 1933 348 257 76 98 1045 40 69
.....................................................................................................TGAGATCATTTTGAAGGCTGATT......................................................... 23 1 1 1833.00 1833 703 500 326 177 12 43 72
.....................................................................................................TTAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 1800.00 1800 174 352 106 1165 1 2 0
.....................................................................................................TGAGATCATTTTAAAAGCTGAT.......................................................... 22 1 1 1754.00 1754 529 681 386 86 1 42 29
.....................................................................................................TGAGATCATTTTGAATGCTGATT......................................................... 23 1 1 1736.00 1736 193 96 946 453 4 19 25
.....................................................................................................TGGGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1704.00 1704 657 778 128 32 1 64 44
.....................................................................................................TGACATCATTTTGAAAGCTGATT......................................................... 23 1 1 1605.00 1605 164 299 998 50 11 51 32
.....................................................................................................TGAGATCATTTTGAAAGCTGGT.......................................................... 22 1 1 1576.00 1576 273 351 782 44 0 84 42
.....................................................................................................TGAGAGCATTTTGAAAGCTGATT......................................................... 23 1 1 1402.00 1402 68 19 208 899 0 80 128
.....................................................................................................TGAGGTCATTTTGAAAGCTGATT......................................................... 23 1 1 1400.00 1400 505 367 252 168 9 45 54
.....................................................................................................TGAGATCATTTTGACAGCTGATT......................................................... 23 1 1 1298.00 1298 212 182 9 691 7 76 121
.....................................................................................................TGAGATCATTTTGAAGGCTGAT.......................................................... 22 1 1 1263.00 1263 430 628 87 21 0 61 36
.....................................................................................................TGAGATTATTTTGAAAGCTGATT......................................................... 23 1 1 1261.00 1261 230 189 431 293 63 20 35
.....................................................................................................CGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1208.00 1208 331 574 157 64 0 59 23
....................................................................................................CTGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 1207.00 1207 35 38 642 484 0 3 5
.....................................................................................................TGAGATCATTTTGAAAGCTAATT......................................................... 23 1 1 1191.00 1191 205 178 515 196 14 29 54
.....................................................................................................TGAGATCATTTTGAAAGCTATT.......................................................... 22 2 1 1164.00 1164 514 325 307 16 1 1 0
.....................................................................................................AGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 1161.00 1161 84 65 667 298 8 23 16
.....................................................................................................TGCGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1158.00 1158 212 690 3 211 1 29 12
.....................................................................................................TGAAATCATTTTGAAAGCTGATT......................................................... 23 1 1 1149.00 1149 118 263 605 96 15 28 24
.....................................................................................................TGAGATCATTTCGAAAGCTGATT......................................................... 23 1 1 1148.00 1148 296 326 264 161 20 42 39
.....................................................................................................TGAGATCATTTTGAAAACTGATT......................................................... 23 1 1 1146.00 1146 195 172 328 264 47 97 43
.....................................................................................................TGAGTTCATTTTGAAAGCTGATT......................................................... 23 1 1 1136.00 1136 128 59 48 864 3 19 15
......................................................................................................GAGATCATTTTGAAAGCTGATTT........................................................ 23 0 1 1119.00 1119 0 6 1099 7 6 1 0
.....................................................................................................TGAGATCACTTTGAAAGCTGATT......................................................... 23 1 1 1114.00 1114 260 332 139 338 10 21 14
................................................................CCGGTTTTCGATTTGGTTTGACC.............................................................................................. 23 1 1 1073.00 1073 0 42 5 1021 3 2 0
.....................................................................................................TGAGATCATTTTGAACGCTGATT......................................................... 23 1 1 1067.00 1067 505 331 19 10 11 64 127
.....................................................................................................TGAGATCCTTTTGAAAGCTGAT.......................................................... 22 1 1 1057.00 1057 163 434 127 244 3 63 23
.....................................................................................................TGAGATCATTTTGAAAGCCGATT......................................................... 23 1 1 1052.00 1052 357 336 143 140 17 28 31
.....................................................................................................TGAGATCATTTTGAAAGCCGAT.......................................................... 22 1 1 1046.00 1046 342 582 32 21 0 48 21
.....................................................................................................TGAGATCATTTTGAAACCTGAT.......................................................... 22 1 1 1037.00 1037 243 447 188 65 0 67 27
.....................................................................................................TGAGATCATTTTGAAAGCTGCTT......................................................... 23 1 1 1036.00 1036 212 265 16 4 194 148 197
.....................................................................................................TGAGACCATTTTGAAAGCTGATT......................................................... 23 1 1 1029.00 1029 282 287 250 137 11 23 39
.....................................................................................................TGAGATCATTTTGTAAGCTGATT......................................................... 23 1 1 1011.00 1011 120 48 288 68 418 35 34
.....................................................................................................TGAGGTCATTTTGAAAGCTGAT.......................................................... 22 1 1 1009.00 1009 358 470 62 21 0 61 37
.....................................................................................................TGAGATCATTTTGAAAGCTGAA.......................................................... 22 1 1 966.00 966 325 128 426 66 1 13 7
.....................................................................................................TGAGCTCATTTTGAAAGCTGATT......................................................... 23 1 1 962.00 962 218 314 371 6 5 21 27
.....................................................................................................TTAGATCCTTTTGAAAGCTGATT......................................................... 23 2 1 947.00 947 0 4 0 939 0 3 1
.....................................................................................................TGAGATCATTTTGAAAGCTGACT......................................................... 23 1 1 943.00 943 285 291 126 155 6 42 38
................................................................CCGGTTTTCGATTTGGTTTGA................................................................................................ 21 0 1 929.00 929 191 167 500 30 1 0 40
.....................................................................................................GGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 924.00 924 497 154 144 65 0 59 5
.....................................................................................................TGAGATCATTTTGAGAGCTGATT......................................................... 23 1 1 904.00 904 306 328 105 47 9 45 64
.....................................................................................................TGAGATCATTTTGAAAGCTGATTC........................................................ 24 1 1 902.00 902 153 126 480 84 31 9 19
.....................................................................................................TGAGATCATTTTGAAAGCGGATT......................................................... 23 1 1 894.00 894 28 17 686 140 1 9 13
.....................................................................................................TGAGATCATTTCGAAAGCTGAT.......................................................... 22 1 1 865.00 865 221 458 90 17 0 50 29
.....................................................................................................TAAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 858.00 858 213 243 92 210 1 73 26
.....................................................................................................TGAGATCATCTTGAAAGCTGATT......................................................... 23 1 1 825.00 825 244 305 91 83 52 20 30
.....................................................................................................TGAGATCATTTTGAAAGCTCATT......................................................... 23 1 1 817.00 817 274 211 190 23 10 78 31
.....................................................................................................TGAGATCATTCTGAAAGCTGATT......................................................... 23 1 1 798.00 798 218 299 135 54 26 29 37
.....................................................................................................TGAGATCATTTTGGAAGCTGAT.......................................................... 22 1 1 797.00 797 258 408 46 9 25 33 18
.....................................................................................................TGAGATCATTTTGAGAGCTGAT.......................................................... 22 1 1 797.00 797 217 447 28 9 0 66 30
.....................................................................................................TGAGATCGTTTTGAAAGCTGAT.......................................................... 22 1 1 786.00 786 224 403 14 16 4 76 49
.....................................................................................................TGAGATCATTTTGAACGCTGAT.......................................................... 22 1 1 775.00 775 249 363 6 0 0 83 74
.....................................................................................................TGAGATCACTTTGAAAGCTGAT.......................................................... 22 1 1 774.00 774 199 428 36 55 0 32 24
.....................................................................................................TCAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 771.00 771 180 284 30 194 0 73 10
.....................................................................................................TGAGATCATTTTCAAAGCTGATT......................................................... 23 1 1 755.00 755 214 228 124 76 10 86 17
.....................................................................................................TGAGATCATTTTGACAGCTGAT.......................................................... 22 1 1 752.00 752 200 233 1 91 0 134 93
.......................................................................................................AGATCATTTTGAAAGCTGATT......................................................... 21 0 1 746.00 746 16 22 593 106 0 3 6
.....................................................................................................TGAGATCATTTTGAAAGTTGATT......................................................... 23 1 1 714.00 714 148 190 80 214 51 14 17
.....................................................................................................TGACATCATTTTGAAAGCTGAT.......................................................... 22 1 1 707.00 707 120 294 207 4 0 64 18
.....................................................................................................TGAGACCATTTTGAAAGCTGAT.......................................................... 22 1 1 699.00 699 206 375 47 13 0 40 18
.....................................................................................................TGAGATCATTTTGAAAGC.............................................................. 18 0 1 691.00 691 77 246 104 239 16 6 3
.....................................................................................................TGAGATCATTTTGAAAACTGAT.......................................................... 22 1 1 686.00 686 127 224 64 108 1 133 29
.....................................................................................................TGAGATCATTTTGAAAGCTAAT.......................................................... 22 1 1 680.00 680 126 213 240 32 0 40 29
.....................................................................................................TGAGATCATTTTGAAAGGTGATT......................................................... 23 1 1 677.00 677 38 41 22 34 518 11 13
.....................................................................................................TGAGATCATTTTGAAAGCTGCT.......................................................... 22 1 1 672.00 672 111 228 11 1 2 196 123
......................................................................................................GAGATCATTTTGAAAGCTGA........................................................... 20 0 1 660.00 660 6 10 643 1 0 0 0
.....................................................................................................TGAGCTCATTTTGAAAGCTGAT.......................................................... 22 1 1 649.00 649 155 362 80 0 0 37 15
.....................................................................................................TGAAATCATTTTGAAAGCTGAT.......................................................... 22 1 1 644.00 644 82 334 168 16 0 37 7
.....................................................................................................TGAGATCATCTTGAAAGCTGAT.......................................................... 22 1 1 633.00 633 139 396 27 15 0 49 7
.....................................................................................................TGAGATCATGTTGAAAGCTGATT......................................................... 23 1 1 620.00 620 12 14 97 51 417 17 12
.....................................................................................................TGAGATCATTCTGAAAGCTGAT.......................................................... 22 1 1 610.00 610 155 363 35 6 3 37 11
.....................................................................................................TGAGATCTTTTTGAAAGCTGATT......................................................... 23 1 1 594.00 594 83 41 49 46 346 12 17
.....................................................................................................TGAGATCATTTTGAAAGCTCAT.......................................................... 22 1 1 586.00 586 134 225 79 5 0 133 10
.....................................................................................................TGAGATCATTTTGATAGCTGATT......................................................... 23 1 1 577.00 577 85 50 366 17 7 26 26
.....................................................................................................TGAGATCATTTTGAATGCTGAT.......................................................... 22 1 1 571.00 571 116 115 238 54 0 33 15
.....................................................................................................TGAGATTATTTTGAAAGCTGAT.......................................................... 22 1 1 567.00 567 146 226 111 28 0 34 22
.....................................................................................................TGAGATCATTTTGAAAGCTGATTG........................................................ 24 1 1 544.00 544 100 64 315 6 45 2 12
.....................................................................................................TGAGATCATTTTGCAAGCTGAT.......................................................... 22 1 1 541.00 541 108 240 10 0 24 94 65
.....................................................................................................TGAGATCATTTTGAAAGCTGATCT........................................................ 24 1 1 539.00 539 5 519 8 3 0 0 4
.....................................................................................................TGAGATGATTTTGAAAGCTGATT......................................................... 23 1 1 520.00 520 47 32 79 316 18 21 7
.....................................................................................................TGAGATCATTTTGAAAGCTGTTT......................................................... 23 1 1 520.00 520 133 87 73 25 10 40 152
.....................................................................................................TTAGATCATTTTGAAAGCTGA........................................................... 21 1 2 511.50 1023 202 122 75 619 1 0 4
.....................................................................................................TGAGATCATTTTCAAAGCTGAT.......................................................... 22 1 1 506.00 506 148 232 29 7 0 79 11
.....................................................................................................GTAGATCATTTTGAAAGCTGATT......................................................... 23 2 1 474.00 474 1 2 0 470 0 1 0
.....................................................................................................TGAGATAATTTTGAAAGCTGATTT........................................................ 24 1 1 471.00 471 2 318 145 0 2 1 3
....................................................................................................TTGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 455.00 455 1 0 450 4 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGTTGAT.......................................................... 22 1 1 432.00 432 100 230 20 39 1 24 18
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTT....................................................... 25 0 1 419.00 419 108 130 163 11 0 0 7
.....................................................................................................TGAGATCATTTGGAAAGCTGATT......................................................... 23 1 1 417.00 417 24 15 351 4 1 5 17
.....................................................................................................TGAGAGCATTTTGAAAGCTGAT.......................................................... 22 1 1 414.00 414 50 13 53 126 0 85 87
.....................................................................................................TGAGATCATTGTGAAAGCTGATT......................................................... 23 1 1 412.00 412 10 9 9 3 346 21 14
.....................................................................................................TGAGATCATTTTGAAAGCTGATAT........................................................ 24 1 1 406.00 406 32 336 25 2 6 0 5
.....................................................................................................TGTGATCATTTTGAAAGCTGATT......................................................... 23 1 1 405.00 405 91 195 72 15 2 15 15
.....................................................................................................CTAGATCATTTTGAAAGCTGATT......................................................... 23 2 1 400.00 400 6 5 1 386 0 2 0
.....................................................................................................AGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 394.00 394 67 85 167 44 1 21 9
.....................................................................................................TGTGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 385.00 385 85 246 18 2 0 26 8
.....................................................................................................TGAGATCATTTTGAAAGATGATTT........................................................ 24 1 1 384.00 384 5 320 45 1 7 0 6
.....................................................................................................TGAGAACATTTTGAAAGCTGATT......................................................... 23 1 1 380.00 380 59 33 183 79 7 13 6
.....................................................................................................TGATATCATTTTGAAAGCTGATTT........................................................ 24 1 1 377.00 377 9 241 58 61 1 5 2
.....................................................................................................TGAGATCATTTTGAAAGCTGAAT......................................................... 23 1 1 357.00 357 66 55 110 95 13 10 8
....................................................................................................GTGAGATCATTTTGAAAGCTGATT......................................................... 24 0 1 352.00 352 17 12 297 15 8 2 1
.....................................................................................................TTAGATCATTTTGACAGCTGATT......................................................... 23 2 1 346.00 346 14 3 0 328 0 1 0
.....................................................................................................TGAGATCAATTTGAAAGCTGATT......................................................... 23 1 1 345.00 345 73 46 172 23 24 3 4
.......................................................................................................TGATCATTTTGAAAGCTGATT......................................................... 21 1 1 331.00 331 58 91 166 14 0 0 2
.....................................................................................................TGAGATCATTTTGAAAGCTTATTT........................................................ 24 1 1 328.00 328 13 269 28 1 3 8 6
....................................................................................................GTGAGATCATTTTGAAAGCTGAT.......................................................... 23 0 1 328.00 328 119 54 105 18 6 24 2
.....................................................................................................TGAGATCATTTTGTAAGCTGAT.......................................................... 22 1 1 325.00 325 77 81 84 7 5 53 18
.....................................................................................................TGAGATCATTTTGAAA................................................................ 16 0 1 323.00 323 0 0 0 0 323 0 0
.....................................................................................................TGAGATCATATTGAAAGCTGATT......................................................... 23 1 1 317.00 317 63 44 82 56 70 2 0
....................................................................................................ATGAGATCATTTTGAACGCTGATT......................................................... 24 2 1 316.00 316 0 0 0 0 316 0 0
.....................................................................................................ATAGATCATTTTGAAAGCTGATT......................................................... 23 2 1 315.00 315 4 3 2 305 0 1 0
.....................................................................................................TGAGTTCATTTTGAAAGCTGAT.......................................................... 22 1 1 302.00 302 71 73 11 118 0 22 7
.....................................................................................................TGAGATCATTTTTAAAGCTGATTT........................................................ 24 1 1 302.00 302 4 248 23 0 0 17 10
.....................................................................................................TGAGATCATTTTGATAGCTGAT.......................................................... 22 1 1 274.00 274 52 88 92 1 1 31 9
.....................................................................................................TGAGATCATTTTGAAAGCGGAT.......................................................... 22 1 1 274.00 274 26 35 164 21 0 21 7
.....................................................................................................TGAGATCATTTTGAAAGCTGAAA......................................................... 23 2 1 266.00 266 62 22 164 10 5 0 3
....................................................................................................CTGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 261.00 261 8 45 148 44 0 14 2
.....................................................................................................TGAGATCATTTTGAAATCTGATTT........................................................ 24 1 1 259.00 259 3 185 38 3 3 11 16
................................................................CCGGTTTTCGATTTGGTTTG................................................................................................. 20 0 1 239.00 239 43 57 122 0 0 2 15
.....................................................................................................TGAGATCATTTTGAAAGCTGTT.......................................................... 22 1 1 233.00 233 36 40 11 6 1 41 98
......................................................................................................GAGATCCTTTTGAAAGCTGATT......................................................... 22 1 1 232.00 232 0 0 232 0 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATGT........................................................ 24 1 1 215.00 215 6 199 5 3 0 0 2
.....................................................................................................TGAGATCATTATGAAAGCTGATT......................................................... 23 1 1 215.00 215 46 42 53 46 19 6 3
.....................................................................................................TGAGATCATTTTGAAAGCTGATAA........................................................ 24 2 1 213.00 213 30 16 138 10 18 0 1
.......................................................................................................AGATCATTTTGAAAGCTGAT.......................................................... 20 0 1 202.00 202 22 27 139 5 0 8 1
.....................................................................................................TGAGATCATTTAGAAAGCTGATT......................................................... 23 1 1 201.00 201 24 34 112 12 5 8 6
................................................................CCGGTTTTCGATTTGGTTTTACT.............................................................................................. 23 1 1 195.00 195 3 24 11 3 0 128 26
.....................................................................................................TGAGATAATTTTGAAAGCTGA........................................................... 21 1 1 192.00 192 5 109 72 0 0 0 6
.....................................................................................................TGAGATCATTTTGAAAGCTTA........................................................... 21 1 1 186.00 186 19 123 31 1 0 9 3
.....................................................................................................TGAGATCATTTTAAAAGCTGATTT........................................................ 24 1 1 183.00 183 25 73 80 2 0 2 1
.....................................................................................................TGAGATCATTTTGAAAGCTGGTTT........................................................ 24 1 1 180.00 180 5 29 135 2 0 3 6
.....................................................................................................TTAGATCATTTTGAAATCTGATT......................................................... 23 2 1 180.00 180 8 25 5 122 0 19 1
.....................................................................................................TGAGATCATTTTTAAATCTGATT......................................................... 23 2 1 176.00 176 0 22 17 0 0 108 29
.....................................................................................................TTAGATCATTTTGAATGCTGATT......................................................... 23 2 1 176.00 176 5 0 0 170 0 1 0
................................................................CCGGTTTTCGATTTGGTTTGACTT............................................................................................. 24 1 1 174.00 174 30 22 74 5 41 0 2
........................................................................................................GATCATTTTGAAAGCTGATT......................................................... 20 0 1 171.00 171 8 12 114 18 14 4 1
.....................................................................................................TGAGATCATTTTTAAATCTGAT.......................................................... 22 2 1 170.00 170 0 24 9 0 0 118 19
.....................................................................................................TGAGAACATTTTGAAAGCTGAT.......................................................... 22 1 1 169.00 169 31 59 57 10 0 10 2
.....................................................................................................TGAGATAATTTTGAAAGATGATT......................................................... 23 2 1 167.00 167 0 25 130 0 2 7 3
................................................................CGGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 167.00 167 4 2 2 157 0 2 0
......................................................................................................GATATCATTTTGAAAGCTGATT......................................................... 22 1 1 164.00 164 1 3 160 0 0 0 0
.....................................................................................................TGAGATCATTTTGGAAGCTGATTT........................................................ 24 1 1 163.00 163 11 52 7 0 88 2 3
.....................................................................................................TGAGATCAATTTGAAAGCTGAT.......................................................... 22 1 1 161.00 161 50 55 44 2 0 9 1
......................................................................................................GAGATCATTTTGAAAGCTGAGT......................................................... 22 1 1 156.00 156 0 0 156 0 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGCTGAG.......................................................... 22 1 1 154.00 154 17 52 28 5 0 40 12
.....................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...................................................... 26 3 1 150.00 150 7 2 122 6 13 0 0
.....................................................................................................TGAGATCATTTTGAAAGCTGAGT......................................................... 23 1 1 148.00 148 9 11 62 6 8 41 11
.....................................................................................................TGAGATCATTTTGAAAGCTGT........................................................... 21 1 1 147.00 147 68 24 49 0 0 0 6
.................................................................CTGTTTTCGATTTGGTTTGACT.............................................................................................. 22 1 1 147.00 147 3 3 0 141 0 0 0
.....................................................................................................TGAGATCATTTGGAAAGCTGAT.......................................................... 22 1 1 145.00 145 16 16 89 0 0 13 11
......................................................................................................GAGCTCATTTTGAAAGCTGATT......................................................... 22 1 1 145.00 145 0 0 145 0 0 0 0
.....................................................................................................TGAGATGATTTTGAAAGCTGAT.......................................................... 22 1 1 144.00 144 41 29 24 26 0 22 2
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...................................................... 26 1 1 140.00 140 44 35 52 0 4 0 5
.....................................................................................................TGAGATCATTTTGAAAGATGA........................................................... 21 1 1 140.00 140 6 82 51 0 0 0 1
.....................................................................................................TGAGATCTTTTTGAAAGCTGAT.......................................................... 22 1 1 139.00 139 51 50 11 7 2 15 3
.......................................................................................................TGATCATTTTGAAAGCTGAT.......................................................... 20 1 1 139.00 139 25 78 35 0 0 0 1
.....................................................................................................TGAGATCATTTTGCAAGCTGATTT........................................................ 24 1 1 137.00 137 5 40 0 0 87 2 3
.....................................................................................................TTAGATCATTTTGAAAGCTGATA......................................................... 23 2 1 135.00 135 12 25 6 92 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGCAGATT......................................................... 23 1 1 134.00 134 23 36 15 46 4 6 4
.....................................................................................................TGAGATCATATTGAAAGCTGAT.......................................................... 22 1 1 134.00 134 36 63 17 9 0 9 0
.....................................................................................................TTAGATCATTTTGAAAGCTGATG......................................................... 23 2 1 130.00 130 1 9 0 120 0 0 0
.....................................................................................................TGAGATCCTTTTGAAATCTGATT......................................................... 23 2 2 129.50 259 0 0 0 253 0 4 2
.....................................................................................................TGGGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 129.00 129 26 79 17 1 1 2 3
.....................................................................................................TGAGATCATTTTTAAAGATGATT......................................................... 23 2 1 129.00 129 0 0 119 0 1 6 3
.....................................................................................................TTAGAGCATTTTGAAAGCTGATT......................................................... 23 2 1 122.00 122 22 0 0 99 0 1 0
....................................................................................................TTGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 122.00 122 0 1 120 1 0 0 0
................................................................CCTGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 121.00 121 31 35 43 11 0 1 0
.....................................................................................................TTAGTTCATTTTGAAAGCTGATT......................................................... 23 2 2 120.00 240 0 0 0 240 0 0 0
.................................................................CGGTTTTCGATTTGGTTTGACC.............................................................................................. 22 1 1 119.00 119 0 1 1 116 0 1 0
.....................................................................................................TGAGATCATTTTTAAAGCTGA........................................................... 21 1 1 119.00 119 6 86 17 0 0 5 5
.....................................................................................................TGAGATCATTTTTAAAGCTTATT......................................................... 23 2 1 118.00 118 3 26 31 0 0 45 13
.....................................................................................................TGAGATCATTTTGAAAGCTGG........................................................... 21 1 1 118.00 118 13 14 80 6 0 0 5
.....................................................................................................TGAGATCATTTTGAAATCTGA........................................................... 21 1 1 117.00 117 15 51 30 4 0 5 12
.....................................................................................................TTAGATCCTTTTGAAAGCTGAT.......................................................... 22 2 1 116.00 116 0 1 0 112 0 2 1
.....................................................................................................TGAGATCATTTTTAAAGCTTAT.......................................................... 22 2 1 115.00 115 1 29 5 0 0 75 5
................................................................CCGTTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 115.00 115 1 14 40 58 0 2 0
.....................................................................................................TGAGATCATTTAGAAAGCTGAT.......................................................... 22 1 1 114.00 114 15 52 30 2 0 9 6
.....................................................................................................TTAGATCATTTTGAAAGCTGATTA........................................................ 24 2 1 113.00 113 27 6 9 71 0 0 0
.....................................................................................................TGAGATCATTATGAAAGCTGAT.......................................................... 22 1 1 110.00 110 44 44 7 8 0 6 1
.....................................................................................................TGAGATCATTTTGAAAGGTGAT.......................................................... 22 1 1 109.00 109 15 47 9 8 6 21 3
.....................................................................................................TGAGATCCTTTTGAAAGCTGATTT........................................................ 24 1 1 109.00 109 8 41 23 18 19 0 0
.................................................................CGGTTTTCGATTTGGTTTGAC............................................................................................... 21 0 1 109.00 109 2 9 64 24 0 9 1
.....................................................................................................TGAGATCATTTTGAAATCTTAT.......................................................... 22 2 1 108.00 108 0 15 4 0 0 78 11
......................................................................................................GAGATCATTTTGAAAGCTGATA......................................................... 22 1 1 106.00 106 0 0 101 0 5 0 0
.....................................................................................................TTAGATCATTTTGAAAGTTGATT......................................................... 23 2 1 105.00 105 3 1 0 101 0 0 0
.....................................................................................................TGCGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 105.00 105 9 68 3 22 2 0 1
......................................................................................................GAGATCATTTTGAAAGCTGATTA........................................................ 23 1 1 103.00 103 0 0 103 0 0 0 0
................................................................CCCGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 103.00 103 2 4 4 93 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATTAA....................................................... 25 2 1 102.00 102 20 2 73 3 4 0 0
.....................................................................................................TTAGATGATTTTGAAAGCTGATT......................................................... 23 2 1 102.00 102 2 0 0 100 0 0 0
................................................................CCGGTTTTCGATTGGGTTTGACT.............................................................................................. 23 1 1 102.00 102 0 0 1 1 99 0 1
......................................................................................................TAGATCATTTTGAAAGCTGATT......................................................... 22 1 1 101.00 101 15 12 68 5 1 0 0
.....................................................................................................TGAGATCATTTTGAAGGCTGATTT........................................................ 24 1 1 100.00 100 17 62 15 1 0 2 3
.....................................................................................................TGAGATCATTTTAAAAGCTGA........................................................... 21 1 1 99.00 99 24 16 53 4 0 0 2
.....................................................................................................TGAGATCGTTTTGGAAGCTGATT......................................................... 23 2 1 98.00 98 0 1 0 0 95 2 0
.....................................................................................................CGAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 96.00 96 12 57 19 6 0 1 1
.....................................................................................................TGATATCATTTTGAAAGCTGATC......................................................... 23 2 2 95.00 190 0 25 0 163 0 2 0
.....................................................................................................TTAGATCATTTTAAAAGCTGATT......................................................... 23 2 2 94.00 188 12 4 6 165 0 1 0
.....................................................................................................TGAGATCAGTTTGAAAGCTGATT......................................................... 23 1 1 93.00 93 25 12 8 7 19 14 8
......................................................................................................GAGATCATTTTGAAAGCTTATT......................................................... 22 1 1 93.00 93 0 0 92 0 0 1 0
.........................................................................................................ATCATTTTGAAAGCTGATT......................................................... 19 0 2 92.50 185 44 42 50 18 23 6 2
.....................................................................................................TGAGATCATTTTGAAATCTTATT......................................................... 23 2 1 91.00 91 0 9 16 0 0 54 12
.....................................................................................................TGAGATCATTTTGAATGCTGGTT......................................................... 23 2 1 90.00 90 0 0 89 0 0 1 0
....................................................................................................ATGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 90.00 90 2 8 74 0 6 0 0
................................................................CCGGCTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 88.00 88 5 6 42 27 3 4 1
...........................................................................................................CATTTTGAAAGCTGATT......................................................... 17 0 2 87.50 175 0 0 0 0 175 0 0
......................................................................................................GAGATCATTTTAAAAGCTGATT......................................................... 22 1 1 87.00 87 0 0 87 0 0 0 0
......................................................................................................GAGATCATTTTGAAATCTGATT......................................................... 22 1 1 86.00 86 0 2 83 1 0 0 0
.....................................................................................................TTAGATTATTTTGAAAGCTGATT......................................................... 23 2 1 86.00 86 1 1 2 82 0 0 0
................................................................CTGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 85.00 85 3 7 5 55 14 0 1
......................................................................................................TAGATCATTTTGAAAGCTGAT.......................................................... 21 1 1 85.00 85 22 33 29 1 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGCAGAT.......................................................... 22 1 1 85.00 85 27 43 3 8 0 3 1
................................................................CCGGTTTTCGATTTTGTTTGACT.............................................................................................. 23 1 1 84.00 84 6 42 17 4 1 11 3
.....................................................................................................TGAGATCATGTTGAAAGCTGAT.......................................................... 22 1 1 84.00 84 8 10 26 5 6 18 11
.........................................................................................................ATCATTTTGAAAGCTGAT.......................................................... 18 0 2 81.00 162 95 54 8 2 0 3 0
.....................................................................................................TGAGGTCATTTTGAAAGCTGATTT........................................................ 24 1 1 77.00 77 14 52 5 2 0 0 4
.....................................................................................................TTAGATCATTTTGAAAGCGGATT......................................................... 23 2 1 76.00 76 1 0 3 72 0 0 0
.....................................................................................................TGATATCATTTTGAAAGCTGA........................................................... 21 1 2 74.00 148 12 77 24 34 0 1 0
................................................................CCGGTTTTCGATTTGGTTT.................................................................................................. 19 0 1 74.00 74 15 21 33 0 0 3 2
.....................................................................................................TTAGATCATTTTTAAAGCTGAT.......................................................... 22 2 1 73.00 73 4 49 0 2 0 18 0
.....................................................................................................TGAGATCATTTTGAAACCTGATTT........................................................ 24 1 1 73.00 73 7 38 22 2 1 2 1
.....................................................................................................TGAGATCATTTCGAAAGCTGATTT........................................................ 24 1 1 72.00 72 8 48 11 2 0 2 1
.....................................................................................................TGAGATCATTTTGAAAGCCGATTT........................................................ 24 1 1 72.00 72 14 43 8 2 1 0 4
................................................................CAGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 72.00 72 4 63 0 0 4 1 0
.....................................................................................................TGACATCATTTTGAAAGCTGATTT........................................................ 24 1 1 71.00 71 5 27 39 0 0 0 0
.....................................................................................................TTAGATCATCTTGAAAGCTGATT......................................................... 23 2 1 71.00 71 1 3 0 67 0 0 0
......................................................................................................GAGATTATTTTGAAAGCTGATT......................................................... 22 1 1 70.00 70 0 0 70 0 0 0 0
.....................................................................................................TGAGATCGTTTTGAAAGCTGATTT........................................................ 24 1 1 70.00 70 4 33 5 0 24 1 3
.....................................................................................................TTAGATCACTTTGAAAGCTGATT......................................................... 23 2 1 69.00 69 2 6 0 61 0 0 0
....................................................................................................CGGAGATCATTTTGAAAGCTGATT......................................................... 24 2 1 69.00 69 0 0 1 68 0 0 0
.....................................................................................................TGAGATCATTTTGAAAGCTGCTTT........................................................ 24 1 1 69.00 69 7 28 1 2 9 4 18
.....................................................................................................TTAGATCATTTTGAAAGCTAATT......................................................... 23 2 1 68.00 68 5 2 0 61 0 0 0
................................................................CCGGTTTTCGCTTTGGTTTGACT.............................................................................................. 23 1 1 67.00 67 4 3 17 35 1 4 3
.....................................................................................................TTAGATCATTTCGAAAGCTGATT......................................................... 23 2 1 67.00 67 6 2 1 58 0 0 0
.....................................................................................................GGAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 67.00 67 18 18 25 5 1 0 0
........................................................................................................GATCATTTTGAAAGCTGAT.......................................................... 19 0 1 66.00 66 11 20 18 9 0 8 0
.....................................................................................................TAAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 66.00 66 4 24 17 19 0 0 2
.....................................................................................................TTAGATCATTTTGAAAGCTGGTT......................................................... 23 2 1 65.00 65 1 2 0 62 0 0 0
......................................................................................................GAGATCATTTTGAAAGCTG............................................................ 19 0 1 65.00 65 0 0 65 0 0 0 0
.....................................................................................................TGAGATCACTTTGAAAGCTGATTT........................................................ 24 1 1 65.00 65 9 46 2 3 2 0 3
.....................................................................................................TGGGATCATTTTGAAAGCTGA........................................................... 21 1 1 63.00 63 29 21 11 1 0 0 1
.....................................................................................................TTAGATCATTTTGAAGGCTGATT......................................................... 23 2 1 62.00 62 7 5 0 50 0 0 0
.....................................................................................................TGAGATCATTGTGAAAGCTGAT.......................................................... 22 1 1 61.00 61 9 13 3 1 2 22 11
................................................................CCGGTTTTCGATTTGGTTTGACA.............................................................................................. 23 1 1 61.00 61 16 30 13 0 1 1 0
.....................................................................................................TTAGATCATTTTGAAAGCCGATT......................................................... 23 2 1 61.00 61 6 3 1 50 0 1 0
.....................................................................................................TTAGATCGTTTTGAAAGCTGATT......................................................... 23 2 1 61.00 61 6 1 1 53 0 0 0
................................................................CCGGTTTTAGATTTGGTTTGACT.............................................................................................. 23 1 1 60.00 60 0 20 11 13 14 2 0
....................................................................................................GTGAGATCATTTTGAAAGCTGA........................................................... 22 0 1 60.00 60 31 6 11 10 0 1 1
.....................................................................................................TGAGATCATTTTGAAAGCTGATAAA....................................................... 25 3 1 59.00 59 4 1 50 2 0 1 1
.....................................................................................................CGAGATCATTTTGAAAGCTGA........................................................... 21 1 1 59.00 59 25 17 15 1 0 0 1
.....................................................................................................TGAGCTCATTTTGAAAGCTGATTT........................................................ 24 1 1 59.00 59 9 37 11 0 1 1 0
......................................................................................................GGGATCATTTTGAAAGCTGATT......................................................... 22 1 1 58.00 58 0 0 46 12 0 0 0
......................................................................................................GAGATCATTTTGAAACCTGATT......................................................... 22 1 1 58.00 58 0 0 57 1 0 0 0
...................................................................................................AATGAGATCATTTTGAAAGCTGATT......................................................... 25 1 1 58.00 58 1 0 5 0 52 0 0
.....................................................................................................TGAGATCCTTTTGACAGCTGATT......................................................... 23 2 1 57.00 57 3 1 0 44 0 8 1
.....................................................................................................TGAGATCATTTTGAAAGCTTATC......................................................... 23 2 1 57.00 57 0 38 2 13 0 3 1

Anti-sense strand reads

AGCTTTCTCCTTTTTGCCTATCGCCTGCTTTTCGCAAACATTGAGGTTACTAAACTGATGCTTTGGCCAAAAGCTAAACCAAACTGACAAAAAGTATGTTCACTCTAGTAAAACTTTCGACTAAAACAGTTACTTATGGTGTAAGGTGTAAGGCTACCAGCTAAAAACAACGAACGACACG

******************************************.........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...........************************************************* 		Read size # Mismatch Hit Count Total Norm Total V040

embryo

 V108

head
..............................................................................................................................................................CGCTAAATACCACGAACGAC... 20 3 10 0.10 1 1 0
.............................................................................................................................................................CAGCTTCAAATAACGAACGA.... 20 3 13 0.08 1 1 0
.....................................................................................................................................TTATGGTGCAAGGGGTTA.............................. 18 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4784:648294-648474 + der-bantam Known_mirbase TCG------AAA---------------GAGGAAAAACGGA-TAGCGGACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-CTTGC---------------TGTGC-------------------------
droYak3 3L:629601-629810 + dya-bantam Known_mirbase TCA---TCGAAA---------------GAGGAAAAACGGA-AAGCGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTT-G------TTGTTGTT----------------GTTG-TTG-CTCGCTGTGCTATACTGTGCTGTGC-------------------------
droSec2 scaffold_2:662607-662787 + dse-bantam Known_mirbase TCG------AGT---------------GAGGAAAAACCGA-AAACGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------
droSim2 3l:606983-607163 + dsi-bantam Known_mirbase TCG------AAT---------------GAGGAAAAACGGA-AAACGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------
dm3 chr3L:642158-642338 + dme-bantam Known_mirbase TCG------AAA---------------GAGGAAAAACGGA-AAACGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------
droEug1 scf7180000409184:669272-669467 + TCG------AGAGACGAAAA-------ACGGAAAAGCAGA-AAGCGAATGAAAAACG--------------------CTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATG-CCACA--------------------------------------TTCCACATTCCAATGCTCGATTTTT----------------GTT-G----T---TTG----GTG-TTTGG---------------TGTGC-------------------------
droBia1 scf7180000300910:717052-717237 + TCGCGATCCACG---------------GAGGAAAAGCGGA-AAACGCACGAAGATCG--------------------TTCG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGACT-TT-------------------------------G----TTG-CTTGG---------------CGTGC-------------------------
droTak1 scf7180000415846:33334-33529 - TCA------AAAAACAAAAAAAATACAGAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------
droEle1 scf7180000491249:790131-790311 + TCA------AAA---------------GAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TTA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTT-------------------------------G----TTG-TTTGG---------------TTTGC-------------------------
droRho1 scf7180000777258:18680-18860 + TCA------AAA---------------GAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTT-------------------------------G----TTG-TTTGG---------------TTTGC-------------------------
droFic1 scf7180000453052:608671-608856 - TCA-GAGGAAAA---------------GAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGCTGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------
droKik1 scf7180000301816:99995-100191 - --G------AAA---------------ACGGAAAAGGGAA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TC---------C-ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTAATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-CT---CTTCGTTTTTTGTG-T----G---TTG----TTG-TTTGG---------------TGTGC-------------------------
droAna3 scaffold_13337:6520531-6520720 - dan-bantam Known_mirbase -----------A---------------AAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA-------AC-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TT-TTCTACGTTTTT----------------G----GTT-TTTTG---------------TGTGC-------------------------
droBip1 scf7180000396709:254422-254639 - ACA------AAAAACGGA---------AAGGAAAAACGGAAAAATGAACGAAAAACG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-T-TATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TTATTTTACTTTTTTTGGGGTTTTGGTTTTTG----TTGCTTTTG---------------TATGC-------------------------
dp5 XR_group8:4603848-4604046 - dps-bantam Known_mirbase TG-------------------------GGGGAAAAACGGA-AAACGAACGAAAAATG--------------------TTTG---GGACT-----AC-TCCACCAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGTTTTT-T------TCGTTTTT----------------TTTTTTTT-TTTTG---------------TGTGC-------------------------
droPer2 scaffold_29:844563-844757 - dpe-bantam Known_mirbase TG-------------------------GGGGAAAAACGGA-AAACGAACGAAAAATG--------------------TTTG---GGACT-----AC-TCCACCAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCCATGGTTGTTTTT-T------TCGTTTTT----------------T----TTT-TTTTG---------------TGTGC-------------------------
droWil2 scf2_1100000004511:10172069-10172272 + dwi-bantam Known_mirbase TCA------T----------------------------------------------C---TTCGTCTACCCTGAT-----GATTTGTTTTTTTTTCATACATTT-TTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTTGCCACATTCCGATGGC--------------------------------------------------------------------TCTGG-------------------------
droVir3 scaffold_13049:5805319-5805458 + dvi-bantam Known_mirbase ---------------------------------------------------------------------------------------------------------------TGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTAT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT------------------------------------------------TTTTG---------------TGTGCCCTGCAC------ACAAGCACACGC
droMoj3 scaffold_6680:4143308-4143456 + dmo-bantam Known_mirbase --------------------------------------------------------------------------------------------------------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATAACCACA--------------------------------------TTCCACATCCCAATGGT------------------------------------------------TTTTG---------------TGTGCCCTGCACACACACACAAACACACAC
droGri2 scaffold_15110:13265170-13265375 - dgr-bantam Known_mirbase ACT------AAA---------------ATGGAATA---------T----TAAAAGTGCTCTCTCTCT-CTCTAAGTGTGTG---CGTCTCTCTGTC-TCCATCACTACCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT-GTTTTTT-------------------------------T----TTG-T---G---------------TGTGCCCTGC--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TCG------AAA---------------GAGGAAAAACGGA-TAGCGGACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-CTTGC---------------TGTGC-------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2312184195.0021841955587653269274390030376746087377810100330
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2211247814.001247814134725450402633339528516287485129772
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24195954.0095954219343905227460017455470722714
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21153527.005352714365210920792022054414112116
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22129569.0029569288973891574412790
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................23122023.002202347816153421723420631332606
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................23114892.001489230995874453503430294
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2018182.008182208322289403583206699
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2317730.0077302039316873915953450204
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2117102.00710268972568321277
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2415918.0059181915257101371948818842
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1914239.004239357891321692026144719
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2312606.0026061583068225320563
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................2212456.00245674165323402224440
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2212360.002360708447633754450358
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2212047.00204763054940119184405120
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................2311119.0011191099701066
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2311073.00107351021020423
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................221966.00966426667133251281
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................211929.00929500304001911671
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................241902.009024808419915312631
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211746.007465931066316220
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................181691.00691104239367724616
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201660.006606431006100
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241544.0054431561221006445
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251419.0041916311701081300
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241352.00352297151217128
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231328.0032810518224119546
.....................................................................................................................................................................TGAGATCATTTTGAAA...................................................................................................................................................................................161323.00323000000323
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231266.00266164103062225
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201239.00239122015243570
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................241213.002131381010301618
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201202.0020213951822270
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................241174.0017474520302241
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201171.00171114181481214
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221154.00154285124017520
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261150.001501226007213
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211147.001474906068240
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................261140.001405205044354
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................221119.00119111601010
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................211118.001188065013140
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................211109.00109642419290
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................221106.00106101000005
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................231103.00103103000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251102.00102733002024
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................19292.50185501826444223
...........................................................................................................................................................................CATTTTGAAAGCTGATT............................................................................................................................................................................17287.50175000000175
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................18281.00162820395540
...............................................................................................................................CCGGTTTTCGATTTGGTTT......................................................................................................................................................................................................................19174.00743302315210
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................19166.00661890811200
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................19165.006565000000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACA..................................................................................................................................................................................................................23161.00611300116301
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................22160.00601110113160
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................25159.005950211410
droYak3
TCA---TCGAAA---------------GAGGAAAAACGGA-AAGCGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTT-G------TTGTTGTT----------------GTTG-TTG-CTCGCTGTGCTATACTGTGCTGTGC-------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2313163085.003163085110842334241235645343805187591066021921771106189
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................221788096.007880966768688021333419576591064558451171945035262
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................231292659.00292659103325334272676236114837714220018
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................231125737.0012573790010512438758181521170000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21165947.006594732267892613781233999470550290106
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................23163282.0063282118406209500120000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24160458.00604583873123493345711617434730404900096
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................22135854.00358541625735329873352358901000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................22124545.0024545170270225303413811150000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22121872.00218723419369241218213240000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................22119391.001939144425841399787349110310349
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................18114490.00144901132310130072104230020
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2217941.0079411892774910000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................2115615.0056155552432211770000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2115539.0055393253231481519110000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2314690.004690415753278098821843780000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2014305.00430510361407162161576808460010
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2413666.003666255105314641103318355100017
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2312564.00256410442230373063150000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1912202.0022023039651149562908671020
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................2211675.001675394278850115321050000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................2411423.0014235921810549549290000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................2111350.00135072574461174999750030
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2111298.001298124521099210200000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231796.0079607534200010000
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211638.006382146813901270000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231586.0058651563745416440000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241580.0058023198337100390000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221548.00548200220204825260000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201508.005083498401110000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................231483.00483198028302000000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................241409.004097362242410270000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241371.0037157182572530380000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231356.0035622332723112130000
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201308.00308110918400670001
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................211304.00304635018510140000
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................191239.00239159112911020000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261229.0022973618020030001
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251205.00205485630634130000
droSec2
TCG------AGT---------------GAGGAAAAACCGA-AAACGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2311555332.001555332248040442750655609208933
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2211425771.00142577169676573987367894414214
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24154196.0054196734314482835524016
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21138650.00386501006914418302111142
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................23124530.002453048805375117912484
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22113261.0013261129896816044
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2018831.008831229331135172908
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2414346.004346113316241074515
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2114043.0040433845715968
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1913481.0034814166078721586
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2313435.0034359971056858524
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2212094.002094560566414554
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2211792.001792513137106577
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................2311355.001355118585444208
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................2211242.001242305450179308
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................2211181.00118150536274321
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................211650.0065027617664134
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................241630.00630228322575
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................181591.005911291344117
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231527.00527375840923
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201480.00480467427
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................241416.00416171978563
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231382.00382379111
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211299.002992566343
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211222.002224988481
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTA.................................................................................................................................................................................................................241211.0021122103779
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................231207.0020778525126
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241202.00202135301621
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241195.00195997845
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231191.0019177504123
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201157.0015766351244
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251148.001484749547
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221142.0014220473738
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201137.0013765103626
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................181136.0013618443242
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................241118.001184417498
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251115.001156714286
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261112.00112616423
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................191106.001063395311
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................181103.00103326623
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................19196.009696000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................21189.0089701054
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................21185.0085525244
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACA..................................................................................................................................................................................................................23170.007028191211
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................20159.0059453110
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTAT..............................................................................................................................................................................21157.00572614116
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................23157.005756010
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................21156.0056306128
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTT...............................................................................................................................................................................20154.00541817415
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................22153.005353000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................26151.00511225311
...............................................................................................................................CCGGTTTTCGATTTGGTTT......................................................................................................................................................................................................................19150.00505111816
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................19140.0040152221
...............................................................................................................................CCGGTTTTCGATTTGGTT.......................................................................................................................................................................................................................18139.003960330
................................................................................................................................CGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................20135.003524182
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................25133.0033111192
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................21130.003030000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTTT..............................................................................................................................................................................21130.003046155
droSim2
TCG------AAT---------------GAGGAAAAACGGA-AAACGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2312180426.002180426429571162569374206208482134743587518564217196719119812521919528580118281339756818
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................221960993.0096099337766814585710462740332457414056133791130174374414132759103826199560112
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................211421115.004211152348517509735191623551131416291071135112758111795011437156463004
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................231183520.00183520418151383297394302279720496895720337783133922255531734017
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................181133946.001339467135616669141894051921405169689318012035201001
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................191130564.00130564427247841292413841515018822941211774312412000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................21158518.0058518352601496382293100891312200000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................22151132.005113226347807910158325577139785682911529412691006730023
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................20146760.004676014745464481491019256995845118113121508118125818011
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................23146081.004608121881254179614840048284955163091155014801673634000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................24132777.003277784554514721424003261315511076750712972561234705000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24122625.002262574662814137044401776133021227304812612241132000
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................22118939.00189393974803125663083638149318216328728006
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................22114259.00142599158271819482800283341292007510000
............................................................................................................................................................................ATTTTGAAAGCTGATT............................................................................................................................................................................16112605.001260500000016137418812314000000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................23112354.00123543849948754630022112000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................22111631.001163144262161698310002915271445131820419130102000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22110776.00107769532161964021542812104333692844002
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................2618689.0086899619725200515486344834492919270000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................2316968.00696830691011205277004045452149411301000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................2113571.0035712508733176347100824118156547017314319004
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................2313338.003338633340235110061123000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................2412773.00277351421361460011912090393663467186000
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................1912657.00265767101411010021692398300000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2112501.00250114125581998711480020283000000
...........................................................................................................................................................................CATTTTGAAAGCTGATT............................................................................................................................................................................1712461.0024610000005525512375000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................2212109.00210987164437370004301238400000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................2511947.0019479647100001131238616461731012000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2311917.001917491290561710013511336341612410000
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................1811872.0018722251541127961798200000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................2511827.001827181114899006675542513184414819000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................2311823.0018232171161942260099993723803493839000
...............................................................................................................................CCGGTTTTCGATTTGGTT.......................................................................................................................................................................................................................1811758.001758418374441232102217100000
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2211356.0013563664594500000000000000
............................................................................................................................................................................ATTTTGAAAGCTGAT.............................................................................................................................................................................1511298.001298000000313161275000000
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2111238.00123830062707272254526521600003
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................2411145.00114570332373370011012103000
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................1811143.0011431213316981521917775200000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................2411076.001076121386117900164149142941081901000
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201983.009839136164017955613128250115000
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................211877.00877579631162513574569000000
.....................................................................................................................................................................TGAGATCATTTTGAAAG..................................................................................................................................................................................171843.0084300000026162037744000000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACA..................................................................................................................................................................................................................231823.0082333185011001041092941886541000
.............................................................................................................................................................................TTTTGAAAGCTGATT............................................................................................................................................................................152815.50163100000010920681524000000
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201784.00784401535210102722200000
....................................................................................................................................TTTCGATTTGGTTTGACT..................................................................................................................................................................................................................181718.0071820480406000000027100000
...............................................................................................................................CCGGTTTTCGATTTGGTTT......................................................................................................................................................................................................................191703.007034017182491311111000001
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................191613.00613357247010000538100000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231613.006131334428723122201536500000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201562.0056215562767716041729000000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAA...................................................................................................................................................................................................................221527.00527502400776123612415300000
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211515.005155612822943412814520401000
..................................................................................................................................GTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................201493.0049322127182311100155100000
...................................................................................................................................TTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................191396.0039615639182000002017000000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241395.00395591716710911362817500000
........................................................................................................................................................................GATCATTTTGAAAGCT................................................................................................................................................................................161377.003770000000000377000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241362.00362642764850078392528168000
................................................................................................................................CGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................221360.00360431330400000000000000
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201274.002741181849651021128900000
..........................................................................................................................................................................TCATTTTGAAAGCTGAT.............................................................................................................................................................................171264.002640000000215256000000
...........................................................................................................................................................................CATTTTGAAAGCTGAT.............................................................................................................................................................................161257.002570000001025249000000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231244.0024401022421400003000000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................221217.0021796148530076131100000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCC................................................................................................................................................................................191203.00203321250000000154000000
.....................................................................................................................................................................TGAGATCATTTTGAAA...................................................................................................................................................................................161195.001950000009211219134000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211179.001798733101700437412101000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAAA........................................................................................................................................................................271179.0017900310081172749010000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251176.00176631436130000521744000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGC..............................................................................................................................................................................211172.00172109291400013348100000
......................................................................................................................................................................GAGATCATTTTGAAAGCT................................................................................................................................................................................181144.0014450032265001048000000
.....................................................................................................................................................................TGAGATCATTTTGAA....................................................................................................................................................................................151137.00137000000146441441000000
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................191133.001331320331750000117000000
.........................................................................................................................................................................ATCATTTTGAAAGCT................................................................................................................................................................................153125.333760000000000376000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAAA...........................................................................................................................................................................241125.00125651412009323404045000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCG................................................................................................................................................................................191116.001164400000000108000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTA...............................................................................................................................................................................201113.00113910220089202330000000
...............................................................................................................................CCGGTTTTCGATTTGGT........................................................................................................................................................................................................................171110.001100000001000109000000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................22193.0093100780002750000000
dm3
TCG------AAA---------------GAGGAAAAACGGA-AAACGAACGAAAAGCG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................23177075950.007707595010111609649537617837763178910825798400203841193314037241192156738962691943136529379385131842158491998526233413081877324543122965435365004219981266640223457703636285479103700101504421322239166749730108051042033630000000000000000023321241331830319141253147039723851252124821023117452482071268879138578226017812545450193632193953414103469923381373152586032825994398568803850385024462451096736521383748295040293814126237941410591344098744151381511846670527235511134408283077718495383399267471150782124437149324970201592145563472235103896519715871148108346321565848698641555083754221674171076923590445510040306183743050543376148431356218256847112110991824805661665186136096127834269856676277899811139362878731225087510493738180681303014559864641757528243816645441251026229221632161526629113921284656137497732129410319315407224441311439942915169355630610215895015497364990033061774842424029183252171130020897011458534009401375206834786712261960193181444567952757250007132533471276153404305987514231837052772195530076335268680620253530626229744926695241820112958651886142686510189427219870497357626825669315697383157331767673226923162760615559711604141372746828893849812323111105655614742917130412855315271818483910137572263671534434544551343274885121177418307385664075340551138017305005408675526233528902347024079103878006481721871247732738151780266468738118381710296571877006127852211221176609219539440651725661819796939739525380628288123951669408235115819637559281911134
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................22157077407.005707740700004127423203492510250623434050594232759826103134756441288209563721031411146504788915181156511716516870119395840142473141712769717411314178339836283993188338820141558917271437155131771688994281900000000000000000476847293842388179458794042682046819249681632432201712539860299945601203761327115500486711314634367751921129982041599634756532892107693464595533363371159062852882187354629785106379102756840728263414315443650629862458012791825411358713485040865287387517833953370683588317299202389601281223041609097412302936100112538512448711751138860102794724894212563402109981066144831372246440763521514328475220110912755222374152141927232391186126371831711378713954951635366212673330161273174122918311752299505593625222734228132523591734676712216480245509295065506010678352494434883216211296719338021522822445749280030752218133124831647494675089281062346516318573277148521346028674151814860793732921051600121561475979853265380305180663158359981213852324621513103614934953738133699161260289573252162828153536426847840812711925764772066503473886475703478508812924630633908061535364527041240667969885060923894993625086086621469822380577090218771144775912328826356823011253001183620242236335342253628626127724054925130918855358991173430307190105456184113835561237219206471411697331499684758012672157473804452492863845370354368653782773443453213657818062298940323920782053
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................2111906065.001906065000024102367651598192734024821739715902463175539557172417121362152162894542332251036898591962872653693227941202111941120110902941061136647400000000000000000983968769665508461726578216898942241329613644073425101025011752836163827703078142727655738324425345220171009207141330221722289842821044828521461798445392417950202123411988196721065150416242095141347988148051280603504093616418332160513364151672679211632285234150207793149419645818641114338316581108525567921809723562174348010781103135385014701024418821298162153927580138132217124513017129154240291482338721722224548850325982108107232544040791357110143945323010087865360011768074566103419511615316971057286813972137151751115162523574111207894359851255461557012569201839081274435446845711995399544225592468166743052835992296364573591732982392330272281952369136891518188603751289298782964411378330259804427307818343668353091289532337032763317808174687477268948310813707084532527910238631573212115035311622181640754251911313322689331341968528486261986127712169942394812484289843490831
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2311429228.001429228000044139165410310101517540991217720803610544414703613634201165828665953411749814145977232058513548102239177353678778313119103203325818475396030000000000000000039845828340820361113119149610023131604446526619530672842124405816154324684683901316133172434458753681132643455203971029198367259492173791015869032329619131894043074610641913351333781111363180572880493753032132142271868236372463904266513477520108815457274787911909314232119837628354327791153622841189053913504093693286082463541964050620880814994744464531720631181411234793043731864179825545074962112669670578292498149235471121776129895463429605840037732120113727241355761249453148025633029272495544166896541076188131372941501643543449250439713675183499033804927942261230635665329016835719036806295118359343021073113471313798075119654421538484202660917744275931176707873589725528013330710244203220492206331341004200703142149964100452213510107513443063427861888926652339401703619062129235931044048343114284522444054753720281351930356161332840
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................2411221852.00122185200001590243700560015020126106399001329961573063460665263095083865363251675301440329508415506280834981135835531700398923495307000000000000000005425694044534085854334011174291359460111433692177972819863328523917474104184023228616143010404118431145010803052160666743490000309151290300960996643400600100588591661238905819687375131980045147691915293018051301222230020631449680326836541827391233946811243478610281216934011184273151737012193420013203598666026404811075945872886611752154933851976154334548276277118501013740512441131215154281000396229493154437873020962313054108484861434728077264531330106041171013768330183028841163252038326055257509943848615279878257551148941184110438334165695572426130321716116019146883185452639120165538512209855379448167942241818021310675443515543693894211032456374777130263977133133523629392258289526697650721963171214266607576391304911548811168135241406555252623374136413696361763039268101071117801087
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................191319092.003190920000000000000000380097677040346554582138410070875354945528768581714997441027737131145257164115380006387240000000000000000045404230120513172464033022152217188115952631613691444382144221611427803109303923028851303181935262200021410118450140813854555106711179807711360527619910600102234810351169243551242750721200564024579410874434160152224741146489371470187413320912731116106000902121631596416986822111507990041354525338542544017475253741876681262849181029492291931014100010365843751022581432142137134163464205212315268286465542786295917561744255515109445910119531962121329314111952186190254251260666072948286724637318585701330550274510991066127718101557023403071592174030572912729910042731119124412988909688349537134152334032277912133211681707897118510324019716155769488310411389609331321243166201654
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................201273697.002736970000231000423153503887003573947866067529334721309308912308852911061007328115218301274783701381831867025004942838217000000000000000000859175538901119183762841644718176832799372311323494449853501641598614108966525274235150192401227021619089155188101284962159108504518420231918424710975076104321297247303405198555022998147952072603133321736528341627891084226739139227351046914459876081030412320047701688336234226582130601501606464604784396787810737812031463038219380378229456313776000034133412602163392817177171278262814243421530201031166411869512838371972197214953217793751030210517451552376555124512161346228453329053012250202158271173279170877273491628107720292238208378514337346017754621088239515131827716741571103697461059591101348629916700313923734823251354852097125651119441050514691267133010631990826388827654394742737
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................231236965.0023696500006248693652110080011311035830010260000000851311183461871695146320410065245811904013953391631140020000000000000000000058493734653212221511053717049061413151003681081251955923162711211700371601201884102733739002357561014390225171016547964897526841359712844232261317538166122001531130133516573972451261680108409715910121921563598737156398183611208693500113154221282235311291990030073322495626720243317061113899590347263215012871977277533962658142662786812144778133315000276173305846367012855442114616106149326255445194469391130562176212261255655253650101313299719831336175610489197210540154310608750569931079581398788120831330529927621771168359206475106631585670193338846402626459442178636715246584566237497712860219881689618736183244898581141572549064910265708392841245859170718080
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................241207833.0020783300001279130301510070011397470026630000000111165122385117156735172261556638816332567347834325110802130000000000000000000005265415422526376221892644311812112836644333812284012924641274239511449259314480601510370611464200136504220103102372194201186076665510191256969765243317438612279143037517123479716717910215001440092160413212512429522174228472225178477507494801341681136070335200000967264701620600285120101161919712250121176348117952533294411239325914150601172530917400334176321421004521476435716681103395530371482872465111351285856273252282392901124542845183176168595516629831124569901420101919146376205511982032779713502447430408232898834322334277729517303213044938761747309667844794287664156554898114528073065946791168226532153152374715118910047731651117311491928953192261175421
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................221157547.00157547000093104403147471241012100195526051612287362886311711601216327973474231137253361611124316471254258558500000000000000000265286180231736236504154229817832246634611567412281201178095913103891502321716191816311101152302010105831844815671911292202021197417812197169462492860871161349300101895992181361271115331089028016795731413186442338116122220011441186106148852694387364024003522410162084413316700010035919111128822152821978605907176526081838982148711467161911867484122100896610838113824166548761703338343520182513310447717152837032747049636015920966695568610257772524410894362252248143829418469821332509356843982714046451433574318278413499931886042007483139116806278987381360212527610976066933313084452045372612040020996118871271922889604243928092913
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................231150407.001504070000540004112190004001771400182600000000111726644519324117518612066776320790020000000000000000000023161817011130311310033012150002303940332518101221514090602162512322315000120100023645180475610668945615479518436110001010751496993431738683084112897917522130335818114610346001610329893143631125541467010000140217121100200313511046706337224274392054218292630162230161116321478300250139565175947137772548533159139113021358011111434551511173223617639240134647012849539110654615377386447450652521545666512472917643231372847922320047752541936033829283912036635642534166211237611021302573621182881557937356231360100252972252395112111687671162814985022752230226660433132222613151929444318922
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................221138889.001388890000200261104118000610216502039613739315711112505731476221511107767920224718950310000000000000000024231024250171631211232478692116381223377127364734465417461421441454255502532790609633111317130000300000229581872171036295682975102117610210013311874067408593328365063301434734337856381361047304367312412137919153009091171013181741127180073001104103843024216022276541404555427024043376271516120815344734100039022823251745012044122333113424680193223314425735807297333539519837437222511624453994457483884276130270133283041768303203817436097678710213572421713303258336515815612321202899013229782121802063872922520914698586951050103535772519204112120313017121118541212475464362681312320547418631452101801451
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................22176799.00767990000020000100640020062380001357000000019145173132223373191333345945113900000000000000000000955400001013180010010300003014292933600102606801608529080650010010110920143322122632341950263146131000028513408677245894323402500281601424115729443777551710215321817000161321600000203600300076647028423614992410492532744235291801761027485004628149365283499902268155609551505450108418579090101957445686189298129225621551642363434834017217872821959112127596732154121551859197514132681541912059828690464742991102527700307611178296341240717711483209196212498329781807390111310872590142415387021166435231957241335224825181134299922871
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................23152777.00527770000400013200150003007216000147000000013731733611712112122733916226620011000000000000000000009117131101011316010000000000205173261711011052408502052160301260012100220852376321265042394843313767151100012571611492681821916768095002382026110552119281421867216764191952230282540013118490000036117003001124106113327334612121920124920201137359874010000532623131921637154011121701514162105123712153234903958695010144131131225152242536247646727383918012395174230319323142508352756862577947351374149771170124733412212594093344607098181963677091483818112170731224678140612306823222512221312113326711201
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................21146977.0046977000052010102014831191300113514012464294983170011757923414207583917212511320053815820600000000000000000616445557231125202981605318181963429820919928510556479193468411685913017890201041001703221002000026112432730123329271925194049210020057362136878243340165301736431317911333621446421070566851741271509511351911610270121000205120150002421008613913925504593370712918494036149698995880000262269122327938395620326126192823213638526255612510010734496138125225319332722232514722171273322293421944734918047446754070116226926158312611704212291463745392112501921499753070251150122172257144867373312743193425279338914734678413
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................18141719.0041719000000000000000000002519200186020000009612246225274717121550000100000000000000000063440000005000000000000000085175020000100310100140100100000000004653651711451227887622364318181600000489193621398531935447060012722121001401469193980683864685326000420611970000011251051004443317233651015359810000000031020000663345433361911395371977618645263069121317223049907604931234139318999591426541342525537182039327648301372622893811778216210545169948170127602781501575131427386779482351242081691337519518719081156551359824
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................18139007.003900700000000000000001470017018415126126313135810828201220132320972123020737339040800019238000000000000000007365453900000022200100011112041017143390000209315410017321364215932364363010010294848087058318816710413621277103610100120636101690364011001934283111381033614124749722648580281849339592870001660137321151332113000000988379504827646396454659491716556534211931001471252231042615364737712067523457237024848961461381722055072707251034784599954372355322636246235333241363514341597182151842349395745105813312141223641987719173502539131314101218102724148343152472
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................22134990.0034990000023101100081004006440601143000000051013171211842267310613433242112713230000000000000000000020311418142741123127023001110000416333556511471060625020130801912509024120001244200883783646313153404828231819111210148911481673003111655350025002953038910301332705233223279213232343000601228000003054004000396253169866455180181196179296253281122725544118314623001111731913163112341532207224262384791811520210200115454813248144528710223725222319926641577248264139337383344246285397116931227924710454311763383913583052391686312416722557311423584121078274909493484430449901348335471221433193155232137185825582317188740
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22128748.00287480000110100100200000049300114111012192252010151124574131031126137800017860000000000000000039402348040101532631430020300011601557116677923122156155240220311181284111527600001133529032617105959304229561211127000001754097201601064104350384022332951220614630121387128020733690551891111000511318000004434032100554310373573813172721517415033262011879111126591605100023175121018041174420416010139651442956101951521193859413364269813426414205142145893643894836843260418200231592713532265352240613811630672122488302721592962692591301457786457198481541062501651196278049265530432013736891053
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................22126278.0026278000000000000010003002180011230000000001601114211111121208916712350000000000000000000032700000002020000000000000011282120100130390601119030340001000020222311441482124231851262241600000281232142273169227181201500530194272136329045125228948375917140002116700000184100100086456419354241367421541416700630000191927164042035236712955430834921483254215311613920011227549931572651651205102166187181338217155183711052485157692183012516434054706812542720326763448724549726946788422561231151421104311537651436653495222453331419151914163341701681
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................24121407.002140700001000000003000100735000226000000009914117823338821211941434316130000000000000000000000019191090000122441011004110012603223422421000040172010511401009600001000104575027263048345131682340542300200237346315688567170160013150132362811003374928430392536330009339160000041330000005423932411721533155157235925129412430026811047004629111115172321956201426015164476614581654517633057886439122301761482532330420047466735147746938280368305371692458261758066882417102411632809816996366678115802881461752771885695038018626937435917221651347352835779502282009194910
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................19115748.001574800000000000000000100193222002430312538100519041974110510183111960000100000000000000000010589000101457005000010222250171840821002102030000000020320000000000176450119261119792601171320312410200471832435351321462620012001441273402786291883434958166100322122800000225700510010306315545134474100410000210025000074396011011500121841027050172235420171762341531638403292355483995239336276113228951521827392861261172629653327716302038204718173046421933179625313969556321830141437201333610992927
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................26114664.001466400000121000000000000253011000000000000171346513495301943873476251220700000000000000000000000311103690036000001011110001010208101030160100000000002000009982002727031572651124825052132027355127000000000082202001110020300000001384108810228101000000193712002200050298802094119888309305102953170012000014505010100132037001363010320521001372561495175949219163251347133121022111186111211202344922054382242323905207715253305111601215513544980416123
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................23111903.0011903000000000000000000000013000210000000011244309312501042132000101000000000000000003212000000000000000000000001110000000000000301110002000000000002143401111180191415111300001102226401011020011030200210431118323450000085000008300100012684684636939139112712531535004000003216016832212278229521823115291331174504334372120623047770496724764796653587951493626442294244281580720872559351628322127046497941522429739251121217681034450363142539794378493740470554915240
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................21111664.001166400000000000000000000100000600101598300042121042111002551200115230000000000000000012810801000242000100013004020225251003000110317411270152383035238270000603430847003685414745400000107384420611064991210770050891691015332581602356270512407510001022400000230000001121111092916111435275257655738146930114100005422619927203912171233367132397341162583103331624241420419255565963371671610018791377199858220971381229105524741101658631103112121111193146419766377154401351042361451594301185122443740284998112521820
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................2418136.008136000010000000030000000430002200000001435540101043663791137001000000000000000000009978010000115000000233000100142031712000018041000101030240010010020346180214162922204976152001001032229764152201802000613090433451504412490322062160004022350000013190000007598492977251673925793236500660000108551475643081968356522531297263596212616645577189893761997361402011618933173102773991737771127722947251630384693294270265158211282252598928106134317113180142573661336135302138145567144970
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2117825.00782500001000001002000000001309130100000000210013001001001214700010000000000000000076280000313232010012110003004837350230110720020000020000000000000011445007170012440000040321362793110410218014810312112212851112150000000000801200000052331416152260725395954254310152585816190000103501359121250254819533778141016101786185031640511150532341813222189110131652724491627501027217471538555910711301301515452462454159034945431119103021421189656205
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................2317093.007093000011110200150003005218000200000000531403011510404531020000000000000000000000047430524344150010000021001841370111000006011000000031100011230200551361213201146828141131000005223722112554030016031406203425061910100004112000000125100100025245512656545748832533519239005721004171013011149456303014970051132772011315744131116071105841115926126161316523156893079235862260173151935681258113191241226927916392511101208015294012476232418460
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................2016860.0068600000300000000713420010070461343711720591120025101311251404003772000000000000000000312541103103337103201439102517265606946129000019102300101011132000100000001240314232438630000010915401821124312970261778746115571191213651922632518611111003000020000100000036301917112476451276101481492099700002916147887671862381263814049135262127771324343362345353322361951501663532311941710253331062199182610841082270117911882012222539211480468727351612128401090
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................2416842.00684200000002000101000000458000600000002641832229703625111043200000000000000000000000327421517144301830000021690001013039481540060811051000100020330000052160777702563413451835125710210057532222466380400470401208002222305982184300002118110000003495023000261610911708335535099174633722170034912004201051154011265111612019821561641717452543676322603116438261276019221811227410928981068469055969216118453301682721710193420819484811991772330930320920420
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................2516249.00624900001076100001000000171020000000000074551123219114512417271274400000000000000000000000105220100161651082400000002921002602717321027440210237011000002020110000126120061041181528393875315625161712000005588436470900000109090012210021234112220022128000007516000210011115319401263386751651108872832004330003101132030080190010131711003412135350138594264526764412221602515206230448813314257214548111214332679155189439750716791312423161922212150
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGC..............................................................................................................................................................................2115321.005321000000001000010000000100007100000001014201132000013251714200000000000000000000000000100001002100000020000010011410010000014771002011403043343008510011022009417224022700000293833216862126370170003020207001028281302130001000000000100000011750512033021413371300100000438529256111118483822761742501433246142031911242544364406218181357185410012456543515626116822817121339381417253351351558341694714725414501616101436171618383689515423034290
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................2015164.0051640000000000000100000041101004701000000301100211100131125310000000000000000000000523700001001010010000001200004272500000301000000000000030000000141604763262913918353362281202498151094831041051108100100216960410632000101013414811421000000187123962412788632731167271640014880100970106002101031700230171633461271393351813996871661375759187914321101321672503233421166739610770114131558871422021106320415
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................2115079.0050790000000000000100020000080480000000000112011420120101310000000000000000000000000120300000561001100101000024481164100000101020100000135141000030000202560162105121711210000010357401117526305102200470308016301053121310221000030520000014001000787078136002110331747205700005327823186131915163571118418394144934845695082649466784163970321954016333126703547882412434577109346871551315215135290130262266837334443713514996408391481428125736871100
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................2114855.004855000000000000000000001300002301000000000100100000043131000010000000000000000007438000000600010000002307201218741200031301000002100001000010244024203410812614420006711234136128281075212160190010361391601452439381172301313000304710001160021001678866118042812556626101560392014110000431651123838522912617401217222201669671282316454402667391819849322356932886810924138439051611011238259311139401952817231423053352145759220190
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................1814327.004327000000000000000002101521010080000000020200011101224111200000000000000000000000108371006001540020001012205013614301904120040020000100070430000000000985007311215151942110912112034550157879851307001192130002002648224313542320001407100000690020002261391552732425900100000800200000202050051031161117621034211455317520542868939403711023941962229322147534806155188348912291431021951926578595562311413251514102224550138661191
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................2413683.003683000001000000011558001000001000000000000001110000000000000000000000000000000002360000004900220001110000021061649000030040000000000100000000000000001202001000000006767101611102008126149112174247871311220000000000000003100000031109450550410610122399236159500032140220111164213016210262566585245613003110401101377301233291448436101021120202149321990516351413454426359522722107720336206212735143178010760
..................................................................................................................................GTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2013676.003676000000000000000000001010094110000000010000000000011002700000000000000000000000001000000000000000000000000000000000000100000000200000200000000110005111000003114143014411441701002120102110026264521003002000010574465405484363210000001088423341435408116395310600003401010020021304100742120500436211149264324518543109143251012882833620251667961541122095341429046212120311730
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................2513530.00353000001000000000000000242000100000001120422590113131502000107691900000000000000000321816150002001072010011220005224836412133520000811400000010805300002010100280021441233168140000003723101250112301300926034025031005810101716611200070100000002011000000433617345323281261212297001932005047133967948504241090934734434564241421425964124540637676127519035735331925240431451334017133141117567971982729521412198115491597810488231171130
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2013452.0034520000000000000000000000000017110000000000010010100100105660010000000000000000004003000000100000000021002002090000020010010000020000000010001400215015530915400210016582144382201864504010811112010042461803312000001000000003000000084603412122258433390090000234213651421341503669425391611032533241111611713209114215103931734111510342912922300100340170200332495402277397343532410513316121510832160590
droEug1
TCG------AGAGACGAAAA-------ACGGAAAAGCAGA-AAGCGAATGAAAAACG--------------------CTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATG-CCACA--------------------------------------TTCCACATTCCAATGCTCGATTTTT----------------GTT-G----T---TTG----GTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCGCGATCCACG---------------GAGGAAAAGCGGA-AAACGCACGAAGATCG--------------------TTCG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGACT-TT-------------------------------G----TTG-CTTGG---------------CGTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCA------AAAAACAAAAAAAATACAGAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCA------AAA---------------GAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TTA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTT-------------------------------G----TTG-TTTGG---------------TTTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCA------AAA---------------GAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTT-------------------------------G----TTG-TTTGG---------------TTTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCA-GAGGAAAA---------------GAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TT---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGCTGATTTTT-------------------------------G----TTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
--G------AAA---------------ACGGAAAAGGGAA-AAACGAACGAAAAACG--------------------TTTG---TAA--------C-TC---------C-ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTAATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-CT---CTTCGTTTTTTGTG-T----G---TTG----TTG-TTTGG---------------TGTGC-------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
-----------A---------------AAGGAAAAACGGA-AAACGAACGAAAAACG--------------------TTTG---TAA-------AC-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TT-TTCTACGTTTTT----------------G----GTT-TTTTG---------------TGTGC-------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2311134752.001134752642253967381245797698279065284569
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................221931328.0093132820855801382568644718224093535838
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24196772.00967724598107357095964883765929
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21136469.0036469463565422634290135977142
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................23120243.0020243271948926183215303
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2318834.0088342457597300124327241
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2017323.00732311719141106633831571
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2317095.007095146924561251409701935
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2415961.0059612584318322145543375
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................2215958.0059582152851990138405
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2214110.00411034635189193566
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1913884.00388414941015740211811585
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................2112555.002555177112421126252261
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................2211546.00154610510992046169107
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2111476.0014761255835616111
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................2611271.00127126120433143
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................1811168.001168369681470476
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2211157.00115733232697296322
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................2311063.0010632510178193
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................231914.0091412477166541303
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201879.0087971381348538
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................251789.007891375519011
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................241761.007612870422331
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................231714.0071417080014
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................241619.006197029263987125
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................221532.00532197107121051155
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251495.00495712727880237
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251422.004221139511131
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211367.0036734704921463
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211286.002868217637612
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231280.00280266110003
...............................................................................................................................CCGGTTTTCGATTTGGTTT......................................................................................................................................................................................................................191264.0026412430208928
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201253.0025323851342
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241231.0023148425287137
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................261192.001923940364766
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221189.0018949320681732
................................................................................................................................CGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................201186.0018618300021
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................181185.0018512143810246
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231182.00182693749108
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGC..............................................................................................................................................................................211127.00127110258317
...............................................................................................................................CCGGTTTTCGATTTGGTT.......................................................................................................................................................................................................................181122.00122416040134
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201121.0012141563399
.....................................................................................................................................................................TGAGATCATTTTGAAAGCC................................................................................................................................................................................191120.0012011170101
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTT...............................................................................................................................................................................201100.0010081075331
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................18189.008913581287
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................19188.00881347241111
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................21180.0080412010459
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................20177.0077231521927
droBip1
ACA------AAAAACGGA---------AAGGAAAAACGGAAAAATGAACGAAAAACG--------------------TTTG---TAA--------C-TC---------CAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-T-TATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TTATTTTACTTTTTTTGGGGTTTTGGTTTTTG----TTGCTTTTG---------------TATGC-------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TG-------------------------GGGGAAAAACGGA-AAACGAACGAAAAATG--------------------TTTG---GGACT-----AC-TCCACCAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGTTTTT-T------TCGTTTTT----------------TTTTTTTT-TTTTG---------------TGTGC-------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2311498015.00149801542755018925158431791664792193532141402408245595343
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................221685144.00685144265722342795153409997854460474178507161421141655
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24173354.00733542093369110142163921877489858697318617
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21172087.00720871738418104907464070357286864101529641718
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................23146802.0046802123094005361415213795012
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22129065.00290652279705714271831211249
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................23127107.00271071624485187786231762358871211136
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................20113513.00135138010484441387210631504169913
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................21113505.0013505813333544625721344
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................22113116.001311691701070519835660133000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2318293.00829314595213641961451512811303525
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2215068.0050686413642734106456832293326
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2313957.003957633774170022000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2413570.0035707201360315814815735398267
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2213026.003026141112413551764752117860
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1912193.0021931130111645113308289596
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................2012174.0021740214943042192
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................2312070.002070020091543001020
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................1812032.002032694194865224111511486
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................2211644.0016442194129618714309826247
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................2411390.001390438051637696429381
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................2111211.001211210423818104146392
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2311015.0010154124620208143013002
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231778.0077845991161323102470
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211757.0075716503759172000
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201649.0064946032011815150
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................241629.0062915306144181910
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................221601.006012156433100000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................251466.0046623885803051000
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................191449.00449044900000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261416.0041613226122062200
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211378.00378226922113349010
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................211367.003674155168131822041
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241349.003490305314332010
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201326.00326030344447000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251326.0032602102214029335130
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................221308.00308030431000000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231268.00268014245456417000
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201234.0023401853112123000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241223.0022301781217664000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251204.0020401501620013221
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221196.001963219199558000
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................191179.0017931242017671010
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................211168.001682144120125002
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................181131.00131184544330000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................261129.00129096240715050
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................221127.001271523078313328
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................181125.001252951412200000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................211123.0012348351312285000
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................191113.0011319675102010
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................231108.00108010701000000
................................................................................................................................CGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................20191.009108511310000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATC............................................................................................................................................................................22177.00770164417000000
......................................................................................................................................................................GAGATCATTTTGAAAGCT................................................................................................................................................................................18162.006206200000000
droPer2
TG-------------------------GGGGAAAAACGGA-AAACGAACGAAAAATG--------------------TTTG---GGACT-----AC-TCCACCAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCCATGGTTGTTTTT-T------TCGTTTTT----------------T----TTT-TTTTG---------------TGTGC-------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................231546521.00546521692161191531104255954126810164346
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................221405555.004055553078240024218773810675601199165
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21139377.0039377117266782192432887027647
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24115905.00159056323831467261038354530
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................23113174.001317411000426309296430713
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2216856.0068563667233274126
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2015363.00536351712194267113741540
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................1814978.004978482485810492
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2214571.00457139071309194107242
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2313225.00322544922147085214193
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2112423.00242327233310121031
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................2112059.0020592031103186
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1912031.002031137187187232598690
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2411575.00157521477854111221197
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2211407.001407105211913558385
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................231805.00805256301577284143
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................221679.0067936526144613692
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................221587.0058714124711327185
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................231528.0052852800000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201365.00365034801610
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................241319.00319632377183
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221315.0031599107815797
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................241303.0030337933508139
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................211286.0028661493365339
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................211248.00248228104123
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................231227.0022722700000
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................221221.0022122100000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231215.0021502140010
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231213.00213401560197
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................231208.002087236315775
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231206.002064419827126
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261182.00182361431020
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211159.001595220158730
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................251158.00158291271010
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211142.00142111202171
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................221137.0013701361000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251126.0012622980033
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241109.00109186804127
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................221101.0010167920518
....................................................................................................................................TTTCGATTTGGTTTGACT..................................................................................................................................................................................................................18199.00999810000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................25193.00930261123420
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................20190.009045607149
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................24177.00779611015
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................18171.007112402845
................................................................................................................................CGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................22169.00696810000
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................21168.006854130001
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................20167.006784123310
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................20167.006715462211
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGC..............................................................................................................................................................................21165.00658118461
..................................................................................................................................GTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................20163.00635830002
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................19157.005727141267
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................19152.005228116124
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................19150.00500500000
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................18143.004322131133
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................23138.00380380000
...................................................................................................................................TTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................19136.00363600000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................26132.00321902713
droWil2
TCA------T----------------------------------------------C---TTCGTCTACCCTGAT-----GATTTGTTTTTTTTTCATACATTT-TTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTTGCCACATTCCGATGGC--------------------------------------------------------------------TCTGG-------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2211510720.00151072012309248839156698499883682208
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2311158616.001158616186573118121122846542036189040
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21195298.0095298722397493438459135269
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24140660.00406605818431223371014218051
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................23130298.0030298159421217432114171290
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................18126763.00267632649589413738
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................2119895.00989598734846
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2218520.00852051682751122599366
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2217052.0070524667932012073
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2016813.00681329721647800497897
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2313833.0038335647392062137187
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2213654.00365430151361539593
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................2213293.003293190625156403803
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2413285.0032853335802611877234
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2113221.0032214828921764200
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................2312876.002876893251209552971
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1912300.00230052268491491998
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................2211611.00161166519680242428
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2311059.001059104421102
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231907.00907964328607133
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201409.004098386645
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................211404.004042801828816
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................241392.00392100133284982
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241378.0037822363273332
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................221341.003413380021
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261338.0033849502372
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221315.003152158113942
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................211299.0029937161146324
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................231279.0027915838145118
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231273.002734510751106
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................241264.00264168721581
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231258.002580255012
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241213.0021344824803
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................231198.001981960020
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211195.00195291441156
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................181187.001871328347636
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201173.00173287773130
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................211157.0015711828191
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................251140.001401530860
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................221135.001357746462
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251134.0013410432772
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251125.00125124811846
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................181117.0011758382163
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................191111.0011119485327
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................20187.00874613712
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................19183.0083874100
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................19181.0081182361024
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................21179.0079222014518
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGC..............................................................................................................................................................................21174.0074600239
....................................................................................................................................TTTCGATTTGGTTTGACT..................................................................................................................................................................................................................18167.0067594031
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................20167.00671537348
..................................................................................................................................GTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................20163.0063544221
................................................................................................................................CGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................22149.0049490000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................26144.00448186012
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTAT..............................................................................................................................................................................21141.004111311313
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................22139.0039237000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC..........................................................................................................................................................................25135.00359150011
...................................................................................................................................TTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................19135.0035302030
................................................................................................................................CGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................20134.0034122182
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................23134.0034033010
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACA..................................................................................................................................................................................................................23132.0032652145
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCCC.........................................................................................................................................................................26129.0029168005
.......................................................................................................................................................................AGATCATTTTGAAAGCTGA..............................................................................................................................................................................19128.0028721000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................24127.0027166230
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCC...........................................................................................................................................................................24126.0026491012
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTG...............................................................................................................................................................................21126.0026221012
...................................................................................................................................................................AGTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................25124.0024410451
......................................................................................................................................................................GAGATCATTTTGAAAGCT................................................................................................................................................................................18123.0023120002
droVir3
---------------------------------------------------------------------------------------------------------------TGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTAT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT------------------------------------------------TTTTG---------------TGTGCCCTGCAC------ACAAGCACACGCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2314431095.00443109517206617283663514034595135385443134223105652189043870803612663957650913332665500287439925371471515063581077277115216748113460131617762686028572460619272061362498170084719814807253841139513359625986909483921051786935736177714451613313329445653549836585207410629322301137395011823480113938229185370207701318817527145381092223956423400014301815802521073721542976291826196564738105
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2212762232.002762232143455793215006072981149846488562088137982179917155554127900551217478294913948121850119593241824872143201468126263361772512399427557186051676027758219808290236904057181865457468033344200129623065948210719195434279217607981604138125422246147020331809152112129357175284493388192376243236330418262180519104150531068791102917036874268923498993210930347835411055313953
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................211251049.0025104978263404017971416257928401858755136424196586359920721053252926131380108620732804133055742511338572827328211123036222189025026811219048029605815814597871091151122171743573302082862373453122649264020183721320216279379380834033081170731947712513133511504114392200857657520882478
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................241179048.0017904869324021943417948696271016603039309847652618812466486559364615975968254331098744054673210869768672576176736983263108636755211244368783241295109423618418820011380188135148278215381376246325272312259165528551571773581602471063750421959466159434035786024560943641625
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................23178037.0078037178614472317852660621021621989527270914134995191319371685278028001472217610311541764672742662281495630473134012234143273651692421233001522226534249816194075131891032212819118720218933724071133
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................18176412.00764122438899121548223822656566124010206100142235758016460755175524512427319211425740941035929473157155977312810912023420939735120229524324619815182586356930197323281335106451135569717557807266742633520126164
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................23176332.007633221506101920820791486809152063212281683271969037425546626515726515660930318719647435552649016255452231375640413493731120209579297280279546267520569406558477926124135959706263397176341513324268335191723751073128916711996169177231364306
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................23169528.00695281184942296115246028410214795141215029827756629911139324017928021534983689257115391033702690247730122526510731669109410431448355358861483350292859185227212616548021314039211791586251572049053556389835532458254828373152242262764122762695
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................19132327.003232774669819717743578724322319942111113147365254119453913291194358449306713375160781321594514044151373473525172625132540111020340249465179411827116211314211930263822281524281045122123
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................20128337.002833742020673863546501381190814655514861848929048751126664941057611381648623510848069129163943943776334295031849011012202354053474038321907259821728710197641622071551201801105416245255
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................24128056.002805655112120738933213361922716213642182623231688129017516412818133558949239710748743592591013121136156781198184884888919220393530202517173712246412113024536020271119293124352270243177514548711175141614391963745124169
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22123478.00234781016226843034810011000223951220751426385188191471834253276000000000001000000012162725621101922813121400034
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................24120602.0020602109276143062023116355252112201059527831440192236308112429347135668781701169911093454130810128761829193204803103302106433242202820219430983644148239941046243177160562162
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................23117526.001752617401481908342100191332322210713133234233517012111915321265944301991314329201196620892718900236341229072106178151216115179182107355052722392504
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................22115690.00156902308751203284668104266420369001694535522510171233361916653946181128016066228324474835167151130286137258284192284246202157113223179245323485110117511735416758248285514104
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................25114579.00145791212113815113030082815200000001318428173491116109190135148881000173832191511810223597331012110001193331632440153720714310811813912695536939513551753
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................22113990.0013990122648450266102134131224208916383062325132925352223143631313012321714292312401417205037302118242433172916711510824259196777301716158914221356538473480410464372905179213815947
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................26112659.00126590013916260254019142283515101322101294333121195458101201210587104915518726544663399452282713131115975660112270005761203722971613102991712272582861132529101134
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2119936.009936910963636285111715161352128211390111352140121013500000000000000000104173260000043275711255
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................2118720.0087201646650174263100000011010010110002110002001014040001120034032522321110800033091967337449130001
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................2418233.008233814155763554501208252323136661066188318981309132635021462788223393337224181182727312466314210019361301845495384058121618012311715414444079100376482
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2218035.0080357582162722962297544151637702146381533143298363239205649948941124123216889145801000465274122891715431181251162072257873738362432991591611852351619214943
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................2217655.00765524813865940321092871271291651512131925104118343919321065109741212774131240100000200030001019113812037508343237411185121013161078
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................2515440.00544002473324443051171717191431131439175422112941424223206164894370712357318996126433403111000000412602596815395591561791019515214650693957
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2314334.004334173576403339394006000032111311249210012194210600004140001000000000001042142103201106773000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................2513481.0034810717718148339882150013101891133021251702318940916172381741541627520314671128861499021101102501011104738443317400139728600000
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................1813127.003127225711752837806037183241151647891148173113166451014251410200224400000000000000001102135102600015221310000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2312959.00295917481651362264655115527762821617269366351016863807231356022006861111251710202110188561313601011413350342137182258284448613
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2311952.001952268510243621144947222189351651415613111836281232201012131022161719712472901201120003231100416148943013524283067626044438015441118
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................2411823.00182324482523826405833925714432392525252029354125146055394415455030327024195443010000000010000003293486420902155382923393901112
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAAA...........................................................................................................................................................................2411719.0017190011171000000001000000000020001100201341102333012020100000026001060377305202161113616181095056220242
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................2211519.0015196821830631419796154321171797143118421540502443132104211000000001000010000940100417022149261121781211177113331
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................2111396.001396925468259561572630113018121612710413131512241655723083714683733101000000002110201442368611841601710067221141
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................2311303.001303101246140000210000020010001000100111101100000000000000100000000001240000000020000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAAA........................................................................................................................................................................2711168.0011680014980601001630101110124364113152320211301141457177280452101000000000000020107735282615919639811311414
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................2011082.0010821410481101000000020010000030010000002000001000000000000100000003500010001001200011
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................1911037.001037811128183466862729499111151510191464481337839462865325114148590000000000000000100211692600038301418211900000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2411022.0010223928399137000000443240212112121304310110031000005534378114211230841400021388824242969801120
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................221942.00942154328310230010000621132011110312203010000011111155310468864104291612031214149124589911010910027
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCC...........................................................................................................................................................................241916.0091601351101071800400001429366226519426039246512483082000081570000000000000000000066297400021212300000
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211859.0085923578131412010002111527664862344271112001001260000000000000000010214001300031115100000
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................181749.0074912141221911194944500314137153955717924431535116431116150000000000000001100140195210630473449474910020
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAA.........................................................................................................................................................................261676.0067601302150000033500303016421156031464764266853934111110000000000000000102116021545221967111300123
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................211668.006681972891600121530000540640003269185930702000000000002021002320245936802000059943422555300000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTA..........................................................................................................................................................................251641.00641002516240000043231251579313164188364624205244242456172310101200001010000000000132020312013141615141210000
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................221625.0062518765511010000000000000100000010110100000000000000010000100000100000000040001100000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................261562.00562054533135107100025211739112652836333115153512453130320023000000000000000001022810093000811829400000
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................211532.00532104095113506011100034010000110013300111101024000102112220201000845301600150442123272500000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................241505.005052091198320412120000312302007001115111000100020000000020000000015176252910045352600011
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCA...........................................................................................................................................................................241459.004590012083818008002332115320212152265254184224521235224810000000000000000010313111201000002000010
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC..........................................................................................................................................................................251448.00448111805457001000061301453958101224263932540280000252000000000000000000000141100093619200000
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201430.0043031195275171112110101651016913561013847824251122711000000000000000000016350000010000000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211385.003855215931910012000091139741041100020371508010031400000000000000000020855900030014012110021
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201371.0037131027211113433200203020022102000320201110002000000000000000000160400000044441400000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGC..............................................................................................................................................................................211323.003231856413121900100005305332262120000010201100003200121000000110003105269500051116022200000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATC............................................................................................................................................................................221287.002870026514000000000000100000000100140000000001000000000000000000000000000000000000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA..........................................................................................................................................................................251267.0026700140310110100100141154112673285261511154114131011621000000000000000000002102300041011500000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................231267.0026768143116000000000000000000001000000000000010000000100221100000901000001026111800000
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201264.00264316111059210100002223302041211210124110300010300000000000000000000191300000012144300000
..................................................................................................................................GTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................201246.00246153117421700100102010000020002211010100100000000110000001101121650670012635116192200000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTC..........................................................................................................................................................................251212.0021200182065001000016170328481211233232263701000009000000000000000000001010000000000000000
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................241209.0020900316002000001110000000001000010010011000000001111303240000820201044425421713102050313
....................................................................................................................................TTTCGATTTGGTTTGACT..................................................................................................................................................................................................................181198.00198101937411802200002101103002110010310101002100101100001101110170000022021512710111410000
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACA..................................................................................................................................................................................................................231193.001931319151030000052001100000130420103505342200000000010000000002541606895448312148475
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTA.........................................................................................................................................................................261192.001920161124304003001134123302376912313733178234000010000000000000003306010066429600000
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................191185.00185111780001000000000000020000000000000000000000000000000000000000000000000200000000
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGACA............................................................................................................................................................................231181.0018101210000000001000000001200010000202121520000100000000000010138010502524203041151278
.....................................................................................................................................................................TGAGATCATTTTGAAAG..................................................................................................................................................................................171170.00170000000000000000000000000000000000000000000000000000000012651021003422812160000001400613
................................................................................................................................CGGTTTTCGATTTGGTTTGACTG.................................................................................................................................................................................................................231170.0017015101630601000002012010010001311220100005200000000201001000058030350001418510171100000
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................191150.00150286320113592200120250202012011300201000012000000000000000000151121000020010100000
....................................................................................................................................................................GTGAGATCATTTTGAAAGC.................................................................................................................................................................................191150.00150142100000000000000000000000000000000000000000100016112200291000000002031152420600000
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................221148.00148001360000000000000010000001010000100010100000000000000000000001000000011000000012
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTC.................................................................................................................................................................................................................241145.001458172060260000000310122210200014114120000030000001010010000000105660000545410410001
droMoj3
--------------------------------------------------------------------------------------------------------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATAACCACA--------------------------------------TTCCACATCCCAATGGT------------------------------------------------TTTTG---------------TGTGCCCTGCACACACACACAAACACACACSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2312060835.0020608354292952926429115867761217159269226
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2211235924.001235924200864738182905081334317040533818
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................231112710.00112710125371285509881935293969
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................23168715.00687153343395431793562616736
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................21154251.005425122077185269476321001311650
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24145408.004540812657106311613488197797260
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................22127339.0027339250208710227420
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................22126648.0026648202244912323623290528
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................24120787.0020787107341056519298266723
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................22119640.00196404961378919224180
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................23116919.00169197220169035
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................21112887.001288712471215635826
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2319166.00916632661511012584623767
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2017792.0077923606315871519701979
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................2216318.0063181329361692894233262
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................2415630.0056301998125551862438828
................................................................................................................................CGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2214439.004439100044380
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................1913327.003327988162115541331425
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................1812581.00258127512044222615
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................2211394.00139446191546712151
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2311350.0013501116734115735
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................2011222.0012221201011082
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................2411109.00110961993445222
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231979.00979191123513422225
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................211924.0092414715287457
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA..........................................................................................................................................................................251904.0090458070527933
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA.........................................................................................................................................................................261862.0086249890032332
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................211854.008545444486212373
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231839.00839796000430
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211824.008245773152335
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................231638.0063825214935319
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................231613.0061360700231
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................241470.0047025571018819
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................241463.0046328006129966
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTC.................................................................................................................................................................................................................241401.00401200141426156
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................201396.003961270232604
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241393.00393236112345456
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201332.00332281023379
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................251328.0032821330210010
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................191328.00328970062187
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................181309.00309652142316
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATC............................................................................................................................................................................221287.002871630011221
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................211275.002751511111147
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................251265.0026513829393938
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................181253.0025336221341159
................................................................................................................................CGGTTTTCGATTTGGTTTGACTC.................................................................................................................................................................................................................231203.0020371311173170
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................201185.001851411817315
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................221179.0017917200070
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................191175.00175940106119
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................191174.0017417300001
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................221168.00168234113581518
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA..........................................................................................................................................................................251168.001681020217146
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC..........................................................................................................................................................................251163.001631180517023
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................211137.001373422153522
droGri2
ACT------AAA---------------ATGGAATA---------T----TAAAAGTGCTCTCTCTCT-CTCTAAGTGTGTG---CGTCTCTCTGTC-TCCATCACTACCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT-GTTTTTT-------------------------------T----TTG-T---G---------------TGTGCCCTGC--------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................221269880.0026988064119205761
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................231228352.00228352117614110738
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................24110552.001055269513601
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................2119154.00915448284326
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATT............................................................................................................................................................................2217269.007269724821
......................................................................................................................................................................GAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................2114076.004076405917
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2311823.0018231118705
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTG...............................................................................................................................................................................2011417.001417722695
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA............................................................................................................................................................................2311059.001059280779
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC............................................................................................................................................................................231943.0094357886
.....................................................................................................................................................................TGAGATCATTTTGAAAGCT................................................................................................................................................................................191561.00561397164
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG............................................................................................................................................................................231559.0055973486
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................231458.004584571
................................................................................................................................CGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................221440.00440278162
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................241374.00374169205
.....................................................................................................................................................................TGAGATCATTTTGAAAGC.................................................................................................................................................................................181361.003613556
......................................................................................................................................................................GAGATCATTTTGAAAGCTGA..............................................................................................................................................................................201255.002552532
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC.............................................................................................................................................................................221238.0023811227
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................241181.0018117110
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT.............................................................................................................................................................................231178.0017861117
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATT............................................................................................................................................................................211164.001641640
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA.............................................................................................................................................................................221155.0015555100
...............................................................................................................................CCGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................221145.0014510738
.......................................................................................................................................................................AGATCATTTTGAAAGCTGAT.............................................................................................................................................................................201101.00101947
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................24193.00937617
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT............................................................................................................................................................................24193.00937518
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT..........................................................................................................................................................................25151.00513615
........................................................................................................................................................................GATCATTTTGAAAGCTGATT............................................................................................................................................................................20144.0044440
.........................................................................................................................................................................ATCATTTTGAAAGCTGAT.............................................................................................................................................................................18143.00431726
.........................................................................................................................................................................ATCATTTTGAAAGCTGATT............................................................................................................................................................................19143.0043385
...............................................................................................................................CCGGTTTTCGATTTGGTTTGA....................................................................................................................................................................................................................21143.0043358
......................................................................................................................................................................GAGATCATTTTGAAAGCTG...............................................................................................................................................................................19142.0042420
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTGG..........................................................................................................................................................................25136.0036360
..........................................................................................................................................................................TCATTTTGAAAGCTGATT............................................................................................................................................................................18131.0031292
........................................................................................................................................................................GATCATTTTGAAAGCTGAT.............................................................................................................................................................................19130.0030300
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.................................................................................................................................................................................................................24127.00271413
.................................................................................................................................GGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................21126.0026260
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTG..........................................................................................................................................................................25121.0021210
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTC..........................................................................................................................................................................25119.0019190
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATA............................................................................................................................................................................22117.0017170
................................................................................................................................CGGTTTTCGATTTGGTTTGAC...................................................................................................................................................................................................................21116.0016133
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTA..........................................................................................................................................................................25115.0015123
...............................................................................................................................CCGGTTTTCGATTTGGTTTG.....................................................................................................................................................................................................................20113.0013112
......................................................................................................................................................................GAGATCATTTTGAAAGCT................................................................................................................................................................................18112.0012120
.......................................................................................................................................................................AGATCATTTTGAAAGCTGA..............................................................................................................................................................................19112.0012120
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCA...........................................................................................................................................................................24112.0012102
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA...........................................................................................................................................................................24111.001165
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA...........................................................................................................................................................................23110.0010100
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATGG...........................................................................................................................................................................24110.0010100
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG.............................................................................................................................................................................22110.001046
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT.........................................................................................................................................................................26110.001064
.......................................................................................................................................................................AGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................2219.00990
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA..............................................................................................................................................................................2219.00945
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACG..................................................................................................................................................................................................................2318.00808
...............................................................................................................................CCGGTTTTCGATTTGGTTTGACC..................................................................................................................................................................................................................2318.00817
...............................................................................................................................CCGGTTTTCGATTTGGTT.......................................................................................................................................................................................................................1817.00770
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA............................................................................................................................................................................2317.00725
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTGGC.........................................................................................................................................................................2617.00770
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA..........................................................................................................................................................................2517.00770
...........................................................................................................................................................................CATTTTGAAAGCTGATTT...........................................................................................................................................................................1816.00660
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC..........................................................................................................................................................................2516.00642
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGT..............................................................................................................................................................................2116.00642
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCG..........................................................................................................................................................................2516.00660
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGG..............................................................................................................................................................................2116.00633
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATGGC..........................................................................................................................................................................2515.00550
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA..........................................................................................................................................................................2515.00532
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTG...........................................................................................................................................................................2315.00550
....................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATTT...........................................................................................................................................................................2515.00550
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATG............................................................................................................................................................................2215.00550
..............................................................................................................................ACCGGTTTTCGATTTGGTTTGACT..................................................................................................................................................................................................................2415.00550
......................................................................................................................................................................GAGATCATTTTGAAAGCTGATTC...........................................................................................................................................................................2315.00550
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTGACC............................................................................................................................................................................2314.00404
.....................................................................................................................................................................TGAGATCATTTTGAAAGCTTT..............................................................................................................................................................................2114.00404

Generated: 10/20/2015 at 11:19 PM