ID:

dan_998

 Coordinate:

scaffold_12947:956564-956714 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.4

Flybase annnotation

CDS [Dana\GF19026-cds]; exon [dana_GLEANR_20644:2]; intron [Dana\GF19026-in]

Repeatable elements

NameClassFamilyStrand
Gypsy7-I_Dya-intLTRGypsy+
mature
  1. scaffold_1155:745-767 -
  2. scaffold_9617:8647-8669 -
  3. scaffold_12916:1350399-1350421 +
  4. scaffold_12947:865236-865258 -
  5. scaffold_12947:931360-931382 +
  6. dan_998  scaffold_12947:956627-956649 +
  7. scaffold_12948:109406-109428 -
  8. scaffold_12984:471947-471969 -
  9. scaffold_12984:614971-614993 +
  10. scaffold_13250:3441399-3441421 +
  11. scaffold_13260:332839-332861 +
star
  1. scaffold_12916:1350352-1350379 +
  2. scaffold_12947:865278-865305 -
  3. scaffold_12947:931313-931340 +
  4. dan_998  scaffold_12947:956580-956607 +
  5. scaffold_12984:471989-472016 -
  6. scaffold_12984:614924-614951 +
  7. scaffold_13077:221832-221859 -
  8. scaffold_13250:3441355-3441382 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCATGCCCAACGGCACTCCACATGGCACATGGCATAGCGCCGACTCAACTTATGTTTAATATTGTTATCCGCGACAAAGTTCCATGCATAGATGACATCTAAGAGAAGGGTGTAGACTCTGCTGAAAGGGACAGGGATTGTATATTGAAACAAAAAGGAAAAGAAGAAGCAGGTAATAGCTTCCTTAAACTCTTTTATAGGCAACACTCAACCCAGGATAACATCAACCCAGGAGGGCCACGATGGAGAC
******************************************************************.............(((((..(((.((...((((((.......))))))...)).))).....)))))...******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V055
head
 V105
male body		 V039
embryo
....................................................................................................................................................................................................................CCCAGGATAACATCAACCCAGGAGGGC............ 27 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................................................................CAGGATAACATCAACCCAGGAGGGC............ 25 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................AGAGAAGTGTGTACACCCTGC................................................................................................................................ 21 3 2 0.50 1 1 0 0 0 0 0
.......................................................................................................GAGAAGTGTGTACACCCTGC................................................................................................................................ 20 3 6 0.50 3 1 0 2 0 0 0
................CTCCACATGGCACATGGCATAGCGCC................................................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................................................TTTATAGGCAACACTCAACCCAGGAT............................... 26 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................TAGACTCTGCTGAAAGGGACAGG................................................................................................................... 23 0 11 0.18 2 0 2 0 0 0 0
..................................................................TATCCGCGACAAAGTTCCATGCATAGAT............................................................................................................................................................. 28 0 8 0.13 1 1 0 0 0 0 0
..................................................................TATCCGCGACAAAGTTCCATGCATA................................................................................................................................................................ 25 0 8 0.13 1 1 0 0 0 0 0
..................................................................TATCCGCGACAAAGTTCCATGCATAG............................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0
...................................TAACGCCGACTCAACTTACA.................................................................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0 0
...........................................................................CAATGTTCCATGCATAGATGACA......................................................................................................................................................... 23 1 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................AGTGAAACAAAAAGGAAAAGAAT.................................................................................... 23 2 9 0.11 1 1 0 0 0 0 0
................................................................................................................................................ATTGAAACAAAAAGGAAAAGAAGAAG................................................................................. 26 0 9 0.11 1 0 1 0 0 0 0
..................................................................................................................................................................................................................AACCCAGGATAACATCAACCCAGGAG............... 26 0 9 0.11 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CAACCCAGGATAACATCAACCCAGGA................ 26 0 9 0.11 1 0 1 0 0 0 0
...................................................................................................................................................................................................................ACCCAGGATAACATCAACCC.................... 20 0 9 0.11 1 1 0 0 0 0 0
.....................................................TGTTTAATATGGTTATCCGCGAC............................................................................................................................................................................... 23 1 9 0.11 1 0 0 1 0 0 0
........................................................................................................................................................................................................GGCAACACTCAACCCAGGATAACATC......................... 26 0 9 0.11 1 0 1 0 0 0 0
.....................................................................CCGCGACAAAGTTCCATGC................................................................................................................................................................... 19 0 9 0.11 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CAACCCAGGATAACATCAACCCA................... 23 0 9 0.11 1 0 1 0 0 0 0
......................................................................................................................................................................................................TAGGCAACACTCAACCCAGGATAACATC......................... 28 0 9 0.11 1 1 0 0 0 0 0
......................................................................................................................................................................................................TTGGCAACACTCAACCCAGGATAACATC......................... 28 1 9 0.11 1 1 0 0 0 0 0
................................................................................................................................................................................................................TCAACCCAGGATAACATCAACCCAG.................. 25 0 9 0.11 1 1 0 0 0 0 0
........................................................................................................................TGCTGAAAGGGAAGGGCATT............................................................................................................... 20 3 20 0.10 2 0 2 0 0 0 0
......................................................................................................................TCTGCTGAAAGGGACAGGGATTGT............................................................................................................. 24 0 11 0.09 1 0 1 0 0 0 0
......................................................................................................................TCTGCTGACAGGGACAGGGATTGT............................................................................................................. 24 1 11 0.09 1 0 1 0 0 0 0
.......................TTGCACATGGCACAGCGGCG................................................................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 1 0 0
.........................................................................................................................GCTGAAACGTACAGGCATTGT............................................................................................................. 21 3 13 0.08 1 0 0 0 1 0 0
............................................CTCCACTTATGGTTAATACT........................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 1
......................ATTGCACATGGCCTAGC.................................................................................................................................................................................................................... 17 2 17 0.06 1 0 0 0 1 0 0
...........................................................................................................................TGAAAGGTACAGGGAT................................................................................................................ 16 1 18 0.06 1 0 0 0 1 0 0
.........................................................................................................................................................AAAAGGAAAAGAAGAAGGA............................................................................... 19 1 19 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................AACACAAAGGAAAAGAGGAA.................................................................................. 20 2 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................AAAAAGGAAACGAAGAAGGA............................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................AGACATCTAAGAGGAGGGA........................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................AAAGAAAAAGGAAAAGAA..................................................................................... 18 1 20 0.05 1 0 0 0 0 0 1
.....................................................................................................................................................AAAAAAAAGTAAAAGAAGAAGCA............................................................................... 23 2 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................AGAAAGGATAAGAAGAAGC................................................................................ 19 2 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................AAACAAAAAGGAGCAGAAGA................................................................................... 20 2 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................AAAAAGGAAAAGAAGAAC................................................................................. 18 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................CACAAGAAGGAAAAGAAGA................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GAGTACGGGTTGCCGTGAGGTGTACCGTGTACCGTATCGCGGCTGAGTTGAATACAAATTATAACAATAGGCGCTGTTTCAAGGTACGTATCTACTGTAGATTCTCTTCCCACATCTGAGACGACTTTCCCTGTCCCTAACATATAACTTTGTTTTTCCTTTTCTTCTTCGTCCATTATCGAAGGAATTTGAGAAAATATCCGTTGTGAGTTGGGTCCTATTGTAGTTGGGTCCTCCCGGTGCTACCTCTG
*******************************************************************************************************************.............(((((..(((.((...((((((.......))))))...)).))).....)))))...****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
................................................................................................................................CCCTGTCCCTAACATATAACTTTGTT................................................................................................. 26 0 9 1.11 10 6 4 0 0 0
....................................................................................................ATTCTCTTCCCACATCTGAGACGACTT............................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
..............................................................AACAATAGGCGCTGTTTCAAGGTACGT.................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................CGTTGTGAGTTGGGTCCTATTGT........................... 23 0 9 0.78 7 2 2 3 0 0
.....................................CGCGGCTGAGTTGAATACAAATTAT............................................................................................................................................................................................. 25 0 4 0.75 3 0 2 0 1 0
...............................................................................................................................TCCCTGTCCCTAACATATAACTTTGTT................................................................................................. 27 0 9 0.44 4 3 1 0 0 0
.........................CGTGTACCGTATCGCGGCTGAGTT.......................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 1 0 0
......................................................................................................................................................................................................ATCCGTTGTGAGTTGGGTCCTATTGT........................... 26 0 9 0.33 3 2 0 0 1 0
............CCGTGAGGTGTACCGTGTACCGTATCTAG.................................................................................................................................................................................................................. 29 2 3 0.33 1 0 1 0 0 0
.......GGTTGCCGTGAGGTGTACCGTGT............................................................................................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
............CCGTGAGGTGTACCGTGTACCGT........................................................................................................................................................................................................................ 23 0 3 0.33 1 0 0 1 0 0
..........TGCCGTGAGGTGTACCGTGTACCGTA....................................................................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0
................................................................CAATAGGCGCTGTTTCAAGGTACGT.................................................................................................................................................................. 25 0 8 0.25 2 2 0 0 0 0
.................................................................................................................................CCTGTCCCTAACATATAACTTTGTT................................................................................................. 25 0 9 0.22 2 2 0 0 0 0
................................................................................................................................CCCTGTCCCTAACATATAACTTTGT.................................................................................................. 25 0 9 0.22 2 1 1 0 0 0
..........................................................................................................................................................................................................GTTGTGAGTTGGGTCCTATTGTAGT........................ 25 0 9 0.22 2 2 0 0 0 0
......................................................................................................................................................................................................ATCCGTTGTGAGTTGGGTCCTAT.............................. 23 0 9 0.22 2 2 0 0 0 0
.......................................................................................................................................................................................................TCCGTTGTGAGTTGGGTCCTATTGT........................... 25 0 9 0.22 2 2 0 0 0 0
.........................................................................................................................CGACTTTCCCTGTCCCTAACATATAACTT..................................................................................................... 29 0 10 0.20 2 0 2 0 0 0
.....................................................................GGCGCTGTTTCAAGGTACGTATCTACT........................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0
......................................................................GCGCTGTTTCAAGGTACGTATCTACT........................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0
....................................................................AGGCGCTGTTTCAAGGTGCGTATCTAC............................................................................................................................................................ 27 1 6 0.17 1 0 1 0 0 0
..................................................................ATAGGCGCTGTTTCAAGGTACGTA................................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0
................................................................CAATAGGCGCTGTTTCAAGGTACTT.................................................................................................................................................................. 25 1 8 0.13 1 0 1 0 0 0
....................................................................AGGCGCTGTTTCAAGGTACGTATCTA............................................................................................................................................................. 26 0 8 0.13 1 1 0 0 0 0
...................................................................TAGGCGCTGTTTCAAGGTACGTATC............................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0
....................................................................................................................................GTCCCTAACATATAACTTTGTTTTTCCT........................................................................................... 28 0 8 0.13 1 1 0 0 0 0
...................................................................TAGGCGCTGTTTCAAGGTACGTATCT.............................................................................................................................................................. 26 0 8 0.13 1 0 1 0 0 0
................................................................................................................................CCCTGTCCCTAACATATAACTTTGTTTTT.............................................................................................. 29 0 9 0.11 1 1 0 0 0 0
.............................................................................................................................................................................................................GTGAGTTGGGTCCTATTGTAGTTGGGT................... 27 0 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................................................TGAGTTGGGTCCTATTGTATT........................ 21 1 9 0.11 1 0 1 0 0 0
...........................................................................................................................................................................................................TTGTGAGTTGGGTCCTATTGTA.......................... 22 0 9 0.11 1 1 0 0 0 0
........................................................................................................................................................................................................CCGTTGTGAGTTGGGTCCTATTGT........................... 24 0 9 0.11 1 0 1 0 0 0
.............................................................................................................................................................................................................GTGAGTTGGGTCCTATTGTAGT........................ 22 0 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................................................TGTGAGTTGGGTCCTATTGTAGT........................ 23 0 9 0.11 1 0 1 0 0 0
....................................................................................................................................................................................................ATATCCGTTGTGAGTTGGGTCCTAT.............................. 25 0 9 0.11 1 0 0 1 0 0
...............................................................................................................................TCCCTGTCCCTAACATATAACTTTGT.................................................................................................. 26 0 9 0.11 1 0 1 0 0 0
..........................................................................................................................................................................................................GTTGTGAGTTGGGTCCTATTTT........................... 22 1 9 0.11 1 0 1 0 0 0
......................................................................................................................................................................................................TTCCGTTGTGAGTTGGGTCCTATTGT........................... 26 1 9 0.11 1 1 0 0 0 0
.......................................................................................................................................................................................................CCCGTTGTGAGTTGGGTCCTATGG............................ 24 2 9 0.11 1 0 1 0 0 0
........................................................................................................................................................................................................CCGTTGTGAGTTGGGCCCTATTGT........................... 24 1 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................................................................TTGTGAGTTGGGTCCTATTGT........................... 21 0 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................................................TGAGTTGGGTCCTATTGTAGTT....................... 22 0 9 0.11 1 0 0 0 1 0
..........................................................................................................................................................................................................GTTGTGAGTTGGGTCCTATTGT........................... 22 0 9 0.11 1 1 0 0 0 0
.....................................................................................................................................................................................................TATCCGTTGTGAGTTGGGTCCTATTGT........................... 27 0 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................................................................TTGTGAGTTGGGTCCTATTGTAG......................... 23 0 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................................CGTTGTGAGTCCGGTCCTATTGT........................... 23 2 9 0.11 1 0 0 1 0 0
................................................................................................................................CCCTGTCCCTAACATATAACTTTGTTT................................................................................................ 27 0 9 0.11 1 0 1 0 0 0
.............................................................................................................................................................................................................GTGAGTTGGGTCCTATTGTAGTTG...................... 24 0 9 0.11 1 1 0 0 0 0
...............................................................................................................................................................................................................GAGTTGGGTCCTATTGTAGTTGGGT................... 25 0 9 0.11 1 1 0 0 0 0
......................................................................................................................................................................................................ATCCGTTGTGAGTTGGGTCCTATT............................. 24 0 9 0.11 1 0 1 0 0 0
......................................................................................................................AGACGACTTTCCCTGTCCCTAACATAT.......................................................................................................... 27 0 10 0.10 1 1 0 0 0 0
..........................................................................................................................GACTTTCCCTGTCCCTAACATATAACTT..................................................................................................... 28 0 10 0.10 1 1 0 0 0 0
...........................................................................................................................ACTTTCCCTGTCCATAACATATAACT...................................................................................................... 26 1 10 0.10 1 1 0 0 0 0
.........................................................................................................................CGACTTTCCCTGTCCCTAACATATAAC....................................................................................................... 27 0 10 0.10 1 0 1 0 0 0
.......................................................................CGCTGTTTCAAGGTACGTATCTA............................................................................................................................................................. 23 0 10 0.10 1 1 0 0 0 0
............................................................................................................................CTTTCCCTGTCCCTAACATATAACTT..................................................................................................... 26 0 10 0.10 1 0 1 0 0 0
............................................................................................................................CTTTCCCTGTCCCTAACATATAACTTT.................................................................................................... 27 0 10 0.10 1 1 0 0 0 0
...........................................................................................CTACCGTTGATTCCCTTCCC............................................................................................................................................ 20 3 11 0.09 1 0 1 0 0 0
.............................................................................................................................................................................................................GTGAGGTGGGTCCTATGGTCG......................... 21 3 19 0.05 1 0 0 0 0 1
........................................................................................................................ACCACTTTGCTTGTCCCTAA............................................................................................................... 20 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12947:956514-956764 + dan_998 CTCATGCCCAACGGCACTCCACATGGCACA--TGGCATAGCGCCGACTCAACTTATGTTTAATATTGTTATCCGCGACAAAGTTCCATGCATAGATGACATCTAAGAGAAGGGTGT-AGACTCTGCTGAAAGGGACAGGGATTGTATATTGAAACAAAAAGGAAAAG-------------AAGAAGCAGGTAATAG-----CTTCCTTAAACTCTTTTATAGGCAACACTCAACCCAGGATAACATCAACCCAGGAGGGCCACGATGGAGAC
droBip1 scf7180000395290:1925-2170 - CTCATGCACAACGTTACTCCACATGGCACAACAGGAGTAGCCCCCACCCAACTGATGTTTAATAGGGTTATCCGCGACAAAGTTCCATGTATAGGTGATATTAGGGCAGGGA--GTAGGACTCTCA---------------------CGAGAAATGTATCGCACCTCAAGAAAATACCAATCATCGCAAGCCACCTGGATACATCTGGAGACTCATCGTTAAGCAGCCCTCAACCGAAGATGACATCTACTCAGGATCACCAAGA---CGTC
droKik1 scf7180000302505:8197-8374 - CTTATGTACAATGTAACTCCGCATAGTAGCACAGGTACTGCACCTACTCAATTAATGTTTAACAGGCTGATCCGTGACAAAATGCCAGGAATTCAGGATTTGGGCGGAGAAATATT-AGACTCAGCAGAACGAGACCAAGATTGCATCACAAAACAGAAGGGAAAGG-------------AAACAGCTGATA--------------------------------------------------------------------------------
droFic1 scf7180000454142:3690-3868 + CTTATGCATAACGTAACTCCACACGGCACAACAGGAGTAGCCCCCACCCAGCTTATGTTTAACAGAGTTATCCGCGATAAAGTTCCATGCATAGGTGATATTGATGAACAGGTTAC-AGACTCGGCCGAAAGAGACAGGGATTGTATGTTAAAACAAAAAGGAAAGG-------------AAGAGGCAGATAA-------------------------------------------------------------------------------
droEle1 scf7180000490417:1433-1614 + CTCATGTACAATGTTACCCCTCATGGCACTACAGGCACGGCTCCAACAGAACTAATGTTTAATAGAGTTATTCGAGATAAGATTCCGGGGATACAAGATTTGGTGGGAGAGTTTAC-AGATTCAGTTGAAAAGGATAGAGACTGTATAAATAAGCAAAAAGGAAAAG-------------AAATGGCTGACAAAAG----------------------------------------------------------------------------
droRho1 scf7180000775393:20423-20601 + TTAATGTACAATGTCACTCCCCATGGTACTACGGGCTCGCCACCATCCGAGCTTATATTTAATCGCACAATTAGAGACAAGATTCCGGGAGTTCAGGATATAGTTGTGGAAGTGGG-AGAATCTGAAGAAAGAGACAGGGACTTTATTAATAAGGAAAAAGGAAAAG-------------AGGTGGCAGATAA-------------------------------------------------------------------------------
droBia1 scf7180000302288:55769-55950 - CTAATGAACAATGTCACGCCTCATGGGACGAAAGGCACGTCTCCATCAGAATTATTGTTTAACAGAATTATTCGGTATAAGATTCCGGGACTACAGGGTTTAGTAGAAGGGCTTAT-CGATTCAGCAGAAAAGGACAGAGATTGTGTAAATAAATAAAAAGGAAGGG-------------AAATGGCAGACAGAAG----------------------------------------------------------------------------
droTak1 scf7180000415069:80415-80596 - CTCATGCAAAACGTGACTCCACATGGCACTACTGGAGTCGCCCCAACCCAACTTATGTTCAATAGGGTTATACGAGATAAAGTGCCAGGTATAGGTGACATTAATGAAACATTAAC-GGATTCTGCTGAAAGGGATAGAGATTGTTTAATGAAAGAAACGGGAAAGA-------------TAGATGCAGATAAAAG----------------------------------------------------------------------------
droEug1 scf7180000409710:2368-2546 + CTCATGCACAACGTGACGCCACACGGGACTACAGGAGTAGCTCCAACTCAGCTTATGTTCAATAGGGTCGTTCGAGACAAAGTTCCATGTATAGATGACATTGATGAACAATTTAC-AGACTCGGCTGAAAGGGATAGAGATTGTATACTAAAACAAAAAGGGAAAG-------------AACAGGCAGACAA-------------------------------------------------------------------------------
dm3 chr3LHet:1108325-1108500 - CTGATGCATAATGTAGCTCCCCATGGAACCACAGGGATTGCCCCAACCCAATTAATGTATAATAGAATAATACGCGATAAAATACCAGGGATTGAAGAATTAAATGAACAGTTCAC-AGACTCTGCGGAAAGAGAAAGAGATATCATGCAAA---AAAAAGGAAAGG-------------AAGCAGCGGATAA-------------------------------------------------------------------------------
droSim2 node_8990:3903-4084 - TTCATGTATAATGTCACTCCTCATGGAACTACAGGCACAGCTCCAACTGAGTTAATGTTTAACCGAGTCATTCGAGATAAGATCCCAGGTATACAAGATCGGGTAGGCGAACATTC-TGATTCAGTGGAAAAATATAGAGAATGTATAGTTAAGCAAAAGGGAAAGG-------------AAATTGCAGACAAGAG----------------------------------------------------------------------------
droSec2 scaffold_46:257451-257632 - TTGATGTACAATGTAACCCCACATGGAACAACAGGGTCAGCACCCACAAAGCTAATGTTCAGCAGAGTCATCCGTGACAAAATACCAGGCATTGGGGATATCTACGAGAAAACCTT-AGACTCTGGGGAAAGAGATAAAGACATTATTGAAAAATATAAGGGAAAGC-------------AGGCAGCCGACAAAAG----------------------------------------------------------------------------
droYak3 v2_chrUn_006:8541-8750 - CTAATGCATAATGTGACTCCCCATGGAACCACAGGGATAGCCCCAACCCGATTAATGTTTAATAGGATAATACGCGATAAATTACCAGGGATAGAAGAATTAAATGAACAGTTCAC-AGATTCTGCGGAAAGAGATAGAGATATCATCCAAAAAGAACAAG-AGAGA-------------ACGCTATAGTCGAGTT---------CCCCGACTATCTGATACCCGTTACTCAGC--------------------------------------
droEre2 scaffold_4929:21505718-21505899 + TTCATGTACAATGTAACCCCACATGGAACAACAGGGGCAGCGTCCACAAAGCTTATGTTCAACAGAGTTATCCGTGACAAACTACCAGGCATTGGGGAGATCTGAAAGAGAACCTT-GGACTCTGGGGAAAGAGATAGAGACGTAATTGAAAAATGTAAGGGAAAGC-------------AAACAGCCGACAAAAG----------------------------------------------------------------------------
dp5 Unknown_group_101:13281-13331 - A-------------------------------------------------------------------------------------------------------------------------------------------------------AACAAAAAAAAAAAA-------------ACGACGTAAGTAATCA-----TTTTAATAAGATCTCTGAT----------------------------------------------------
droPer2 scaffold_1:6443923-6443974 - G------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAAGAGGAAAAA-------------AAGTGGCAGCCAAATT-----GCTCCTCGATATCTTTTAT----------------------------------------------------
droWil2 scf2_1100000004949:1464194-1464375 - CTGATGTATAATGTAACCCCTCATGGGACCACAGGCTCCGCTCCTACAGAGCTGATGTTCAATCGAGTCATTAGGGATAAAATCCCGGGAATACAAGATTTAGTGGGAGTGTTTAC-AGACTCAGCGGAAAGGGATAATGACTGCATCAATAAACAAAAGGGAAAGG-------------AAACTGCAGATAAAAG----------------------------------------------------------------------------
droVir3 scaffold_12970:10915726-10915771 - GAAACG------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGAAAAG-------------AAGAAGCAGGAGGCCT--------CCCTGACCCCATT-------------------------------------------------------
droMoj3 scaffold_6541:1700872-1701053 - CTGATGTACAATGTAACCCCTCATGGAACCACAGGCACCGCTCCTACTGAGTTAATGTTCAATCGAGTAATTAGGGACAAGATTCCAGGAATACAAGATTTAGTAGGGGAGTTCGC-TGACTCAGCGGAAAGGGATAAAGATTGCATTAATAAACAGAAGGGGAAGG-------------AAGTTGCAGACAAGAG----------------------------------------------------------------------------
droGri2 scaffold_15252:12845679-12845746 - TCCAAGGGCAATGCCA-----------------------------------------------------------------------------------------------------AAAATATGCCGCAAGAAAAAAAAAATGTATATAGATACAAATGAAAAAAG-------------AA------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTCATGCCCAACGGCACTCCACATGGCACA--TGGCATAGCGCCGACTCAACTTATGTTTAATATTGTTATCCGCGACAAAGTTCCATGCATAGATGACATCTAAGAGAAGGGTGT-AGACTCTGCTGAAAGGGACAGGGATTGTATATTGAAACAAAAAGGAAAAG-------------AAGAAGCAGGTAATAG-----CTTCCTTAAACTCTTTTATAGGCAACACTCAACCCAGGATAACATCAACCCAGGAGGGCCACGATGGAGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................CCCAGGATAACATCAACCCAGGAGGGC............2720.501010000
...........................................................................................................................................................................................................................................CAGGATAACATCAACCCAGGAGGGC............2520.501010000
................CTCCACATGGCACA--TGGCATAGCGCC....................................................................................................................................................................................................................................2630.331010000
.......................................................................................................................................................................................................................TTTATAGGCAACACTCAACCCAGGAT...............................2630.331010000
...................................................................................................................T-AGACTCTGCTGAAAGGGACAGG.....................................................................................................................................23110.182200000
....................................................................TATCCGCGACAAAGTTCCATGCATAGAT................................................................................................................................................................................2880.131010000
....................................................................TATCCGCGACAAAGTTCCATGCATA...................................................................................................................................................................................2580.131010000
....................................................................TATCCGCGACAAAGTTCCATGCATAG..................................................................................................................................................................................2680.131010000
...................................................................................................................................................ATTGAAACAAAAAGGAAAAG-------------AAGAAG......................................................................................2690.111100000
.......................................................................................................................................................................................................................................AACCCAGGATAACATCAACCCAGGAG...............2690.111010000
......................................................................................................................................................................................................................................CAACCCAGGATAACATCAACCCAGGA................2690.111100000
........................................................................................................................................................................................................................................ACCCAGGATAACATCAACCC....................2090.111010000
.............................................................................................................................................................................................................................GGCAACACTCAACCCAGGATAACATC.........................2690.111100000
.......................................................................CCGCGACAAAGTTCCATGC......................................................................................................................................................................................1990.111010000
......................................................................................................................................................................................................................................CAACCCAGGATAACATCAACCCA...................2390.111100000
...........................................................................................................................................................................................................................TAGGCAACACTCAACCCAGGATAACATC.........................2890.111010000
.....................................................................................................................................................................................................................................TCAACCCAGGATAACATCAACCCAG..................2590.111010000
.........................................................................................................................TCTGCTGAAAGGGACAGGGATTGT...............................................................................................................................24110.091100000
...........................................................................................................................................................AAAAAGGAAAAG-------------AAGAAC......................................................................................18200.051010000
droBip1
CTCATGCACAACGTTACTCCACATGGCACAACAGGAGTAGCCCCCACCCAACTGATGTTTAATAGGGTTATCCGCGACAAAGTTCCATGTATAGGTGATATTAGGGCAGGGA--GTAGGACTCTCA---------------------CGAGAAATGTATCGCACCTCAAGAAAATACCAATCATCGCAAGCCACCTGGATACATCTGGAGACTCATCGTTAAGCAGCCCTCAACCGAAGATGACATCTACTCAGGATCACCAAGA---CGTCSizeHit CountTotal NormTotal
No Reads
droKik1
CTTATGTACAATGTAACTCCGCATAGTAGCACAGGTACTGCACCTACTCAATTAATGTTTAACAGGCTGATCCGTGACAAAATGCCAGGAATTCAGGATTTGGGCGGAGAAATATT-AGACTCAGCAGAACGAGACCAAGATTGCATCACAAAACAGAAGGGAAAGG-------------AAACAGCTGATA--------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTTATGCATAACGTAACTCCACACGGCACAACAGGAGTAGCCCCCACCCAGCTTATGTTTAACAGAGTTATCCGCGATAAAGTTCCATGCATAGGTGATATTGATGAACAGGTTAC-AGACTCGGCCGAAAGAGACAGGGATTGTATGTTAAAACAAAAAGGAAAGG-------------AAGAGGCAGATAA-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTCATGTACAATGTTACCCCTCATGGCACTACAGGCACGGCTCCAACAGAACTAATGTTTAATAGAGTTATTCGAGATAAGATTCCGGGGATACAAGATTTGGTGGGAGAGTTTAC-AGATTCAGTTGAAAAGGATAGAGACTGTATAAATAAGCAAAAAGGAAAAG-------------AAATGGCTGACAAAAG----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTAATGTACAATGTCACTCCCCATGGTACTACGGGCTCGCCACCATCCGAGCTTATATTTAATCGCACAATTAGAGACAAGATTCCGGGAGTTCAGGATATAGTTGTGGAAGTGGG-AGAATCTGAAGAAAGAGACAGGGACTTTATTAATAAGGAAAAAGGAAAAG-------------AGGTGGCAGATAA-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTAATGAACAATGTCACGCCTCATGGGACGAAAGGCACGTCTCCATCAGAATTATTGTTTAACAGAATTATTCGGTATAAGATTCCGGGACTACAGGGTTTAGTAGAAGGGCTTAT-CGATTCAGCAGAAAAGGACAGAGATTGTGTAAATAAATAAAAAGGAAGGG-------------AAATGGCAGACAGAAG----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTCATGCAAAACGTGACTCCACATGGCACTACTGGAGTCGCCCCAACCCAACTTATGTTCAATAGGGTTATACGAGATAAAGTGCCAGGTATAGGTGACATTAATGAAACATTAAC-GGATTCTGCTGAAAGGGATAGAGATTGTTTAATGAAAGAAACGGGAAAGA-------------TAGATGCAGATAAAAG----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTCATGCACAACGTGACGCCACACGGGACTACAGGAGTAGCTCCAACTCAGCTTATGTTCAATAGGGTCGTTCGAGACAAAGTTCCATGTATAGATGACATTGATGAACAATTTAC-AGACTCGGCTGAAAGGGATAGAGATTGTATACTAAAACAAAAAGGGAAAG-------------AACAGGCAGACAA-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTGATGCATAATGTAGCTCCCCATGGAACCACAGGGATTGCCCCAACCCAATTAATGTATAATAGAATAATACGCGATAAAATACCAGGGATTGAAGAATTAAATGAACAGTTCAC-AGACTCTGCGGAAAGAGAAAGAGATATCATGCAAA---AAAAAGGAAAGG-------------AAGCAGCGGATAA-------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................AAAGGAAAGG-------------AAGCAGCGGAT.................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GATATCATGCAAA---AAAAAGGAAAG..........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................AACAGTTCAC-AGACTCTGCGGAAAGA...........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................GAAGAATTAAATGAACAGT................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ATAATAGAATAATACGCGATAAAATACC..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGAACAGTTCAC-AGACTCTGCGGAA..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GAATAATACGCGATAAAATACCAGGGA.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................TGCAAA---AAAAAGGAAAGG-------------AAGCAGC.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGGAAAGG-------------AAGCAGCGGATAA-------------------------------------------------------------------------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATCATGCAAA---AAAAAGGAAAG..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TAATACGCGATAAAATACCAGGGATT...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..GATGCATAATGTAGCTCCCCATGGA.....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ATTGAAGAATTAAATGAACAG.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTAAATGAACAGTTCAC-AGACTCTGC..................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AATAATACGCGATAAAATA............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CGCGATAAAATACCAGGGATTGAAGA..............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................ACTCTGCGGAAAGAGAAAGAG....................................................................................................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
.....................................................................................................................AGACTCTGCGGAAAGAGAAAG......................................................................................................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000
.................................................................................................................CAC-AGACTCTGCGGAAAGAGAAAGAGA...................................................................................................................................2740.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
...................................................................................ACCAGGGATTGAAGAATTAAA........................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GCAAA---AAAAAGGAAAGG-------------G...........................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTCAC-AGACTCTGCGGAAAGAGAAAGA.....................................................................................................................................2740.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................AATACCAGGGATTGAAGAATT...........................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
.................................................................................................................CAC-AGACTCTGCGGAAAGAGA.........................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................CAGGGATTGAAGAATTAAATG......................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
..................................................................................TACCAGGGATTGAAGAATTAAAT.......................................................................................................................................................................2340.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...........................ACCACAGGGATTGCCCCAACCCAATTAA.........................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CATGGAACCACAGGGATTGCC......................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACAGGGATTGCCCCAACCC...............................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTCCCCATGGAACCACAGGGA...........................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................TCAC-AGACTCTGCGGAAAGAGAAAGAGA...................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................TACCAGGGATTGAAGAATTAAATGAA....................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AAAGAGAAAGAGATATCATGC...........................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................AC-AGACTCTGCGGAAAGAGAAAGAGA...................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................TTCAC-AGACTCTGCGGAAAGAGA.........................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCAC-AGACTCTGCGGAAAGAGAAAGA.....................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTCAC-AGACTCTGCGGAAAGA...........................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................AC-AGACTCTGCGGAAAGAGAAAGAGAT..................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................TTCAC-AGACTCTGCGGAAAG............................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AC-AGACTCTGCGGAAAGAGAA........................................................................................................................................2140.2510000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AGACTCTGCGGAAAGAGAAA.......................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................C-AGACTCTGCGGAAAGAGAAA.......................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AC-AGACTCTGCGGAAAGAGA.........................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................TGCGGAAAGAGAAAGAGATATCATGC...........................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCAC-AGACTCTGCGGAAAGAGAAAG......................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACAGGGATTGCCCCAGT.................................................................................................................................................................................................................................17170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CAGGGATTGAAGAATTATGC.......................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................AA---AAAAAGGAAAGG-------------AAGG........................................................................................18130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................ATTGCCCCAACCCAATGCT.........................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................................ATAATAGAATAATACGTT....................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droSim2
TTCATGTATAATGTCACTCCTCATGGAACTACAGGCACAGCTCCAACTGAGTTAATGTTTAACCGAGTCATTCGAGATAAGATCCCAGGTATACAAGATCGGGTAGGCGAACATTC-TGATTCAGTGGAAAAATATAGAGAATGTATAGTTAAGCAAAAGGGAAAGG-------------AAATTGCAGACAAGAG----------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................CAGGTATACAAGATCGGGTAGGCGA..................................................................................................................................................................2511939.0019390008001015721615802281000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAA.................................................................................................................................................................261532.00532000000845304110560000
.....................................................................................CAGGTATACAAGATCGGGTAGGC....................................................................................................................................................................231512.0051200130024281040721000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAAC................................................................................................................................................................271380.0038000100073141750450000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGT..................................................................................................................................................................251318.00318000000099013801953000
.....................................................................................CAGGTATACAAGATCGGGTAGGCG...................................................................................................................................................................241282.002820001000983232401303000
.........................................................................................TATACAAGATCGGGTAGGCGAACAT..............................................................................................................................................................251102.001020000004993860000000
.........................................................................................TATACAAGATCGGGTAGGCGAACATTC-...........................................................................................................................................................27173.00730000004941910000000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAA..................................................................................................................................25162.006200000010826125010000
...........................................................................................TACAAGATCGGGTAGGCGAACATTC-...........................................................................................................................................................25157.00570000002432541000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAA...........................................................................................................23156.005600000016421131010000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGG-------------A...........................................................................................26156.005600030081410133050000
...ATGTATAATGTCACTCCTCATGGA.....................................................................................................................................................................................................................................................24151.0051000000356550000000
.......................................................TGTTTAACCGAGTCATTCGAGATAAGA..............................................................................................................................................................................................27149.004900000041610190000000
.....................................................................................CAGGTATACAAGATCGGGTAGG.....................................................................................................................................................................22148.0048000000034043070000
...........................................................TAACCGAGTCATTCGAGATAAGA..............................................................................................................................................................................................23134.00340000000102913000000
.................................................................................................................TTC-TGATTCAGTGGAAAAATATAGAGA...................................................................................................................................27134.0034000000181150090000
........................................................................................................................TTCAGTGGAAAAATATAGAGAATGTA..............................................................................................................................26133.00330000005101080000000
...............................................................CGAGTCATTCGAGATAAGATCCCAGGT......................................................................................................................................................................................27131.0031000000300100000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGC..................................................................................................................................................................25130.0030000000060210210000
...............................................TGAGTTAATGTTTAACCGAGTCATTCGAGA...................................................................................................................................................................................................30129.0029000000521300000000
.....................................................................................CAGGTATACAAGATC............................................................................................................................................................................15128.0028000000024040000000
.....................................................................................CAGGTATACAAGATCGGGTA.......................................................................................................................................................................20127.0027000000010123020000
.......................................................................................................TAGGCGAACATTC-TGATTCAGTGGA...............................................................................................................................................25126.0026000000146240000000
......................................................................................AGGTATACAAGATCGGGTAGGCGA..................................................................................................................................................................24126.0026000100221002000000
..........................................................TTAACCGAGTCATTCGAGATAAGA..............................................................................................................................................................................................24126.002600000055187000000
....................................................TAATGTTTAACCGAGTCATTCGAGA...................................................................................................................................................................................................25123.0023000000010580000000
.......................................................................................................................................TAGAGAATGTATAGTTAAGCAAAAGGGA.............................................................................................................28123.0023000100215320000000
.............................TACAGGCACAGCTCCAACTGAGTTAA.........................................................................................................................................................................................................................26123.0023000100022017010000
...............................................................CGAGTCATTCGAGATAAGATCCCAGG.......................................................................................................................................................................................26422.00880000007101520000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGG-------------............................................................................................25122.002200000071632030000
...........................................................................................TACAAGATCGGGTAGGCGAACAT..............................................................................................................................................................23122.0022000000100732000000
.......................................................TGTTTAACCGAGTCATTCGAGATA.................................................................................................................................................................................................24121.0021000100112115000000
.................................................................................................................TTC-TGATTCAGTGGAAAAATATAGAGAA..................................................................................................................................28121.002100000004370070000
.....................................................................................CAGGTATACAAGATCGGGTAG......................................................................................................................................................................21120.002000000009173000000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------AAAT........................................................................................25120.002000020018413010000
..................................................................................................TCGGGTAGGCGAACATTC-TGATTCAGT..................................................................................................................................................27119.001900010087210000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAA............................................................................................................22119.001900000005941000000
......................................................................TTCGAGATAAGATCCCAGGTATACAAGA..............................................................................................................................................................................28119.0019000000212130010000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAACA...............................................................................................................................................................28119.0019000000210011050000
...............................................................CGAGTCATTCGAGATAAGATCCCAGGTA.....................................................................................................................................................................................28118.0018000000170100000000
.....................................................................................CAGGTATACAAGATCGGGTAGGAT...................................................................................................................................................................24116.0016000000000000160000
.......................................................................................................TAGGCGAACATTC-TGATTCAGTGGAA..............................................................................................................................................26116.001600100043340010000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGA...................................................................................................................................24115.001500000070530000000
...............................................TGAGTTAATGTTTAACCGAGTCATTCGA.....................................................................................................................................................................................................28115.001500000009150000000
..................................................................................................................TC-TGATTCAGTGGAAAAATATAGAGAA..................................................................................................................................27115.001500000022360020000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAACAT..............................................................................................................................................................29115.0015000000015000000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGTT.................................................................................................................................................................26113.0013000000010000120000
.....................................................................................CAGGTATACAAGATCGGGTAGGCT...................................................................................................................................................................24111.001100000009000020000
.....................................................................................CAGGTATACAAGATCGGGT........................................................................................................................................................................19111.001100000004025000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGG-------------AA..........................................................................................27111.001100020002322000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAG..........................................................................................................24110.001000000010232020000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------AA..........................................................................................23110.001000000003106000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGA.............................................................................................................21110.001000000043201000000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------A...........................................................................................22110.001000000005005000000
.....................................................................................CAGGTATACAAGATCGGGTAGGT....................................................................................................................................................................23110.001000000000000091000
....................TCATGGAACTACAGGCACAGCTCCAAC.................................................................................................................................................................................................................................27110.001000010000000090000
...........................................................................................TACAAGATCGGGTAGGCGAACATTC-TGA........................................................................................................................................................28110.001000000061210000000
.........................................................................................................................TCAGTGGAAAAATATAGAGAATGTA..............................................................................................................................25110.001000000004330000000
.......................TGGAACTACAGGCACAGCTCCAACTGAGT............................................................................................................................................................................................................................2919.00900000000000090000
....................................................TAATGTTTAACCGAGTCATTCGAGATA.................................................................................................................................................................................................2719.00900000005040000000
...ATGTATAATGTCACTCCTCATGGAAC...................................................................................................................................................................................................................................................2619.00900000036000000000
...........................................................TAACCGAGTCATTCGAGATAAGATCC...........................................................................................................................................................................................2619.00900000001008000000
.........................................................................................TATACAAGATCGGGTAGGCGAACA...............................................................................................................................................................2418.00800000050210000000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------............................................................................................2118.00800000010115000000
.....................................................................................................................................TATAGAGAATGTATAGTTAAGCAAA..................................................................................................................2518.00800000012140000000
...ATGTATAATGTCACTCCTCATGGAA....................................................................................................................................................................................................................................................2518.00800000031400000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAAT................................................................................................................................................................2718.00800000001000070000
.........................................TCCAACTGAGTTAATGTTTAACCGAG.............................................................................................................................................................................................................2617.00700000004021000000
.....................................................................................CAGGTATACAAGATCGGGTAGGA....................................................................................................................................................................2317.00700000001000060000
.TCATGTATAATGTCACTCCTCATGG......................................................................................................................................................................................................................................................2517.00700030020110000000
.........................................TCCAACTGAGTTAATGTTTAACCGAGT............................................................................................................................................................................................................2717.00700000013030000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAAA................................................................................................................................................................2717.00700000001000060000
........................................................................................................................TTCAGTGGAAAAATATAGAGA...................................................................................................................................2117.00700000031210000000
.................................................................................................................TTC-TGATTCAGTGGAAAAATATAGA.....................................................................................................................................2516.00600000003030000000
.........................................................................................TATACAAGATCGGGTAGGCGAACATT.............................................................................................................................................................2616.00600000020400000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAC.................................................................................................................................................................2616.00600000001000041000
.................................................................................................................TTC-TGATTCAGTGGAAAAATATAGAG....................................................................................................................................2616.00600000000000060000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------AAA.........................................................................................2416.00600010004001000000
...........................................................................................TACAAGATCGGGTAGGCGAACATTC-TGAT.......................................................................................................................................................2916.00600000040200000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGAT.................................................................................................................................................................2616.00600000002001030000
.........................................................................................TATACAAGATCGGGTAGGCGAAC................................................................................................................................................................2316.00600000030201000000
.........................................................TTTAACCGAGTCATTCGAGATAAGA..............................................................................................................................................................................................2515.00500000000050000000
...ATGTATAATGTCACTCCTCATGG......................................................................................................................................................................................................................................................2315.00500000012110000000
...............................................................................................................CATTC-TGATTCAGTGGAAAAATATAGA.....................................................................................................................................2715.00500000005000000000
.......................................................................................................TAGGCGAACATTC-TGATTCAGTGGAAAAA...........................................................................................................................................2915.00500000031100000000
...........................................................TAACCGAGTCATTCGAGATAAGATC............................................................................................................................................................................................2515.00500010000004000000
........................................................................................................................................................AGCAAAAGGGAAAGG-------------AA..........................................................................................1715.00500000000005000000
...................................................TTAATGTTTAACCGAGTCATTCGAGA...................................................................................................................................................................................................2615.00500000013010000000
...............................................................CGAGTCATTCGAGATAAGATCCCAGT.......................................................................................................................................................................................2644.5018000000120600000000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAATG................................................................................................................................2714.00400000012100000000
..................................................................................TCCCAGGTATACAAGATC............................................................................................................................................................................1814.00400000031000000000
.....................................................................................CAGGTATACAAGATCGG..........................................................................................................................................................................1714.00400000000013000000
.TCATGTATAATGTCACTCCTCATGGA.....................................................................................................................................................................................................................................................2614.00400020002000000000
.TCATGTATAATGTCACTCCTCATG.......................................................................................................................................................................................................................................................2414.00400030001000000000
......................................................................................AGGTATACAAGATCGGGTAGGCGAA.................................................................................................................................................................2514.00400000004000000000
..................................................................................................................TC-TGATTCAGTGGAAAAATATAGAGA...................................................................................................................................2614.00400000002100010000
.......................................GCTCCAACTGAGTTAA.........................................................................................................................................................................................................................1614.00400000000004000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGG-------------AAAT........................................................................................2914.00400000022000000000
...................................................................TCATTCGAGATAAGATCCCAGGTA.....................................................................................................................................................................................2414.00400000010210000000
......................................................................................AGGTATACAAGATCGGGTAGGCGAAC................................................................................................................................................................2614.00400100000200010000
...........................................................................................TACAAGATCGGGTAGGCGAACA...............................................................................................................................................................2214.00400000000400000000
.......................................................................................GGTATACAAGATCGGGTAGGCGAACAT..............................................................................................................................................................2714.00400000040000000000
........................................................................................................AGGCGAACATTC-TGATTCAGTGGA...............................................................................................................................................2414.00400000020200000000
.....................................................................ATTCGAGATAAGATCCCAGGTAT....................................................................................................................................................................................2314.00400000000013000000
.............................................................................TAAGATCCCAGGTATACAAGATCGGGT........................................................................................................................................................................2713.00300000010002000000
.............................................................................................................................................ATGTATAGTTAAGCAAAAGGGAAA...........................................................................................................2413.00300000011001000000
...........................................................................................TACAAGATCGGGTAGGCGAA.................................................................................................................................................................2013.00300000010200000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCA...................................................................................................................................................................2413.00300000000010020000
.....................................................................................CAGGTATACAAGATCGGGTAGGCAT..................................................................................................................................................................2513.00300000000000021000
.....................................................................................................................................TATAGAGAATGTATAGTTAAGCAAAAGGGA.............................................................................................................3013.00300000011010000000
.......................................................................................................................................TAGAGAATGTATAGTTAAGCAAAAG................................................................................................................2513.00300020001000000000
....................................................................................................................................................GTTAAGCAAAAGGGAAAGG-------------AAATTGC.....................................................................................2613.00300000000102000000
.................................................................................................................TTC-TGATTCAGTGGAAAAAT..........................................................................................................................................2013.00300000000002010000
........................................................................................................................TTCAGTGGAAAAATATAGAGAA..................................................................................................................................2213.00300000002100000000
....................................ACAGCTCCAACTGAGTTAA.........................................................................................................................................................................................................................1913.00300000000003000000
......................................................................................................................................................TAAGCAAAAGGGAAAGG-------------AAATTGCA....................................................................................2513.00300010000002000000
...........................................................................................TACAAGATCGGGTAGGCGAACATTC-T..........................................................................................................................................................2613.00300010000020000000
........................................................GTTTAACCGAGTCATTCGAGATAAGA..............................................................................................................................................................................................2613.00300000001101000000
..................................................................................TCCCAGGTATACAAGATCGGGTAGGCGA..................................................................................................................................................................2813.00300000003000000000
.TCATGTATAATGTCACTCCTCATGGAAC...................................................................................................................................................................................................................................................2813.00300010000002000000
................................................................................................................................................TATAGTTAAGCAAAAGGGAAAGG-------------............................................................................................2313.00300000000012000000
................................................................................................................................................TATAGTTAAGCAAAAGGGAAAGG-------------AAAT........................................................................................2713.00300000002010000000
................................................................................................................................................TATAGTTAAGCAAAAGGGAAAGG-------------A...........................................................................................2413.00300000000012000000
.................TCCTCATGGAACTACAGGCACAGCTC.....................................................................................................................................................................................................................................2613.00300000000000021000
...............................................................................AGATCCCAGGTATACAAGATCGGGT........................................................................................................................................................................2513.00300000001020000000
.......................................................................................................................................TAGAGAATGTATAGTTAAGCAAAAGG...............................................................................................................2613.00300010000200000000
.........................................................................................................................TCAGTGGAAAAATATAGAGAATGTATA............................................................................................................................2713.00300000000300000000
...........................................................................................TACAAGATCGGGTAGGCGAACATT.............................................................................................................................................................2413.00300000010110000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGACT................................................................................................................................................................2713.00300000001000020000
...........................................................TAACCGAGTCATTCGAGATAAG...............................................................................................................................................................................................2213.00300000000003000000
.......................................................................................................TAGGCGAACATTC-TGATTCAGTGGAAAA............................................................................................................................................2813.00300000010200000000
................................................................................................................................................TATAGTTAAGCAAAAGGGAAAGG-------------AAA.........................................................................................2613.00300000001002000000
..........................................................................................ATACAAGATCGGGTAGGCGA..................................................................................................................................................................2013.00300000000003000000
........................................................................................................................................AGAGAATGTATAGTTAAGCAAAAGGGA.............................................................................................................2713.00300000001011000000
...............................................................CGAGTCATTCGAGATAAGATCCCA.........................................................................................................................................................................................2442.751100000070310000000
...............................................................CGAGTCATTCGAGATAAGATCCCAG........................................................................................................................................................................................2542.751100000030800000000
..................................................................................TCCCAGGTATACAAGATCGGGTAGGC....................................................................................................................................................................2612.00200000011000000000
.....................................................................................CAGGTATACAAGATCGGGTAGAA....................................................................................................................................................................2312.00200000000000020000
.............................................................................................CAAGATCGGGTAGGCGAACATTC-TGAT.......................................................................................................................................................2712.00200000010001000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGG-------------AAA.........................................................................................2812.00200000002000000000
.........................................................................................TATACAAGATCGGGTAGGCGA..................................................................................................................................................................2112.00200000010001000000
.........................................................................................................................................................GCAAAAGGGAAAGG-------------AA..........................................................................................1612.00200000000002000000
.....................................................................................CAGGTATACAAGATCGGGTAGGAC...................................................................................................................................................................2412.00200000000000020000
.............................................................................................................................................ATGTATAGTTAAGCAAAAGGGAAAGG-------------............................................................................................2612.00200000000002000000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAATGTA..............................................................................................................................2912.00200000002000000000
.....................................................................ATTCGAGATAAGATCCCAGGTATACA.................................................................................................................................................................................2612.00200000001001000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGA-------------TT..........................................................................................2712.00200000000000020000
...........................................................TAACCGAGTCATTCGAGATAAGAT.............................................................................................................................................................................................2412.00200000000002000000
.....................................................AATGTTTAACCGAGTCATTCGAGATA.................................................................................................................................................................................................2612.00200000001001000000
..................................................................................................................................................TAGTTAAGCAAAAGGGA.............................................................................................................1712.00200000000002000000
.........................................................................................TATACAAGATCGGGTAGGCGAA.................................................................................................................................................................2212.00200000010100000000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAA...........................................................................................................1912.00200000000011000000
...............................................................................................................CATTC-TGATTCAGTGGAAAAATA.........................................................................................................................................2312.00200000000020000000
.............................TACAGGCACAGCTCCAAC.................................................................................................................................................................................................................................1812.00200000000002000000
.............................................................................TAAGATCCCAGGTATACAAGATCGGG.........................................................................................................................................................................2612.00200000000011000000
........................................................................................................................TTCAGTGGAAAAATATAGAGAATGT...............................................................................................................................2512.00200000001100000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGG..............................................................................................................2012.00200000010010000000
.................TCCTCATGGAACTACAGGCACAGCTCC....................................................................................................................................................................................................................................2712.00200000010000010000
.....................................................AATGTTTAACCGAGTCATTCGAGATAAGA..............................................................................................................................................................................................2912.00200000011000000000
..................................................................................................................TC-TGATTCAGTGGAAAAATATAGA.....................................................................................................................................2412.00200000000020000000
..............................................................................................................................................TGTATAGTTAAGCAAAAGGGAAAGA-------------............................................................................................2512.00200000000100010000
.....................................................................................CAGGTATACAAGATCGGG.........................................................................................................................................................................1812.00200000001001000000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAATGT...............................................................................................................................2812.00200000000020000000
................................AGGCACAGCTCCAACTGAGTTAA.........................................................................................................................................................................................................................2312.00200000000002000000
.............................TACAGGCACAGCTCCA...................................................................................................................................................................................................................................1612.00200000000002000000
........................................................................................................................TTCAGTGGAAAAATATAGAGAATGTATA............................................................................................................................2812.00200000011000000000
..................................................................................................TCGGGTAGGCGAACATTC-TGATTCAGTGGA...............................................................................................................................................3012.00200000011000000000
.....................................................................................CAGGTATACAAGATCGGGTAGGTAT..................................................................................................................................................................2512.00200000000000020000
.......................................................TGTTTAACCGAGTCATTCGAGA...................................................................................................................................................................................................2212.00200000002000000000
......................................................................................................................................................TAAGCAAAAGGGAAAGG-------------AAATTGCAGA..................................................................................2712.00200000000002000000
.........................................................................GAGATAAGATCCCAGGTATACAAGAT.............................................................................................................................................................................2612.00200000000002000000
....................................................................................CCAGGTATACAAGATCGGGTAGGCGAAC................................................................................................................................................................2812.00200000002000000000
.......................................................................................GGTATACAAGATCGGGTAGGCGAAC................................................................................................................................................................2512.00200000001100000000
.........................................................................................................................................GAGAATGTATAGTTAAGCAAAAGGGA.............................................................................................................2612.00200010010000000000
..................................................................................................TCGGGTAGGCGAACATTC-TGATTC.....................................................................................................................................................2412.00200000010100000000
..........................................................TTAACCGAGTCATTCGAGATAAGAT.............................................................................................................................................................................................2512.00200000000002000000
......................................AGCTCCAACTGAGTTAATGTTTAACCGA..............................................................................................................................................................................................................2812.00200000001010000000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------AAT.........................................................................................2412.00200000002000000000
.............................................................................................................................................ATGTATAGTTAAGCAAAAGGGAAAGG-------------A...........................................................................................2712.00200000002000000000
......................................................................................................................GATTCAGTGGAAAAATATAGAGAA..................................................................................................................................2412.00200000011000000000
....................TCATGGAACTACAGGCACAGC.......................................................................................................................................................................................................................................2112.00200000000000020000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAT..................................................................................................................................2512.00200000000200000000
...................................................TTAATGTTTAACCGAGTCATTCGAGATA.................................................................................................................................................................................................2812.00200000001010000000
.....................................................................................CAGGTATACAAGATCGGGTAGT.....................................................................................................................................................................2212.00200000001001000000
...........TGTCACTCCTCATGGAACTACAGGCAC..........................................................................................................................................................................................................................................2712.00200010000000010000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAG..........................................................................................................2012.00200000000002000000
......................................................................TTCGAGATAAGATCCCAGGTATACAAGAT.............................................................................................................................................................................2912.00200000010100000000
...............................................................CGAGTCATTCGAGATAAGATCCCAGGA......................................................................................................................................................................................2741.25500000050000000000
................................................................GAGTCATTCGAGATAAGA..............................................................................................................................................................................................1841.25500000000014000000
......................................................................................AGGTATACAAGATCGGGTAGGCGAAAC...............................................................................................................................................................2711.00100000000000010000
.....................................................................................CAGGTATACAAGATCGGGTAGGTTT..................................................................................................................................................................2511.00100000000000010000
.....................................................................................CAGGTATACAAGATCGGGTAGGG....................................................................................................................................................................2311.00100000001000000000
.....................................................................................CAGGTATACAAGATCGGGTAGGCGG..................................................................................................................................................................2511.00100000000000010000
..........................................................................................ATACAAGATCGGGTAGGCGAACATTC-...........................................................................................................................................................2611.00100000001000000000
..................................................................................................................TC-TGATTCAGTGGAAAAATATAGAGAAT.................................................................................................................................2811.00100000001000000000
......................................AGCTCCAACTGAGTTAATGTTTAACCGAGT............................................................................................................................................................................................................3011.00100000001000000000
...............................................TGAGTTAATGTTTAACC................................................................................................................................................................................................................1711.00100000000001000000
.....................................................................................CAGGTATACAAGATCGGGTAGGAA...................................................................................................................................................................2411.00100000000000010000
........................................................................................................................................................AGCAAAAGGGAAAGG-------------A...........................................................................................1611.00100000000001000000
.......................................................................TCGAGATAAGATCCCAGGTATACAAGA..............................................................................................................................................................................2711.00100000000010000000
..................................................................................................TCGGGTAGGCGAACATTC-TGATTCAGTG.................................................................................................................................................2811.00100000000100000000
.......................TGGAACTACAGGCACAGCTCCAAC.................................................................................................................................................................................................................................2411.00100000000000010000
.....................................................................................................................................................TTAAGCAAAAGGGAAAGG-------------AA..........................................................................................2011.00100000001000000000
..................................................................................................................TC-TGATTCAGTGGAAAA............................................................................................................................................1711.00100000000001000000
.......................................................TGTTTAACCGAGTCATTCGA.....................................................................................................................................................................................................2011.00100000001000000000
.............................................................................................................................TGGAAAAATATAGAGAATGTATAGTTA........................................................................................................................2711.00100000000010000000
........................................................................CGAGATAAGATCCCAGGTATACAAGAT.............................................................................................................................................................................2711.00100000000010000000
................................AGGCACAGCTCCAACTGAGTTAATGT......................................................................................................................................................................................................................2611.00100000000001000000
...............................................................................................................CATTC-TGATTCAGTGGAAAAATATAGAA....................................................................................................................................2811.00100000001000000000
.......................TGGAACTACAGGCACAGCTCA....................................................................................................................................................................................................................................2111.00100000000000010000
...........................................................................GATAAGATCCCAGGTATACAAGATC............................................................................................................................................................................2511.00100000010000000000
................................................................................................................................................TATAGTTAAGCAAAAGGGAAA...........................................................................................................2111.00100000001000000000
......................ATGGAACTACAGGCACAGCTCCAAC.................................................................................................................................................................................................................................2511.00100000000000010000
.............................................................................................................................................ATGTATAGTTAAGCAAAAGGGAAAAC-------------C...........................................................................................2711.00100000000001000000
..............................................................................................................ACATTC-TGATTCAGTGGAAAAATA.........................................................................................................................................2411.00100000000001000000
....................................................................................CCAGGTATACAAGATCGGGTAGGCGAACA...............................................................................................................................................................2911.00100000001000000000
.............................................................................................................................................ATGTATAGTTAAGCAAAAGGGAAAG..........................................................................................................2511.00100000010000000000
...........................................................................................................................AGTGGAAAAATATAGAGAATGTATAGT..........................................................................................................................2711.00100000000010000000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAAT.................................................................................................................................2611.00100000000001000000
...............................................TGAGTTAATGTTTAACCGAGTCATTC.......................................................................................................................................................................................................2611.00100000000010000000
..............................................................................................................................................................AGGGAAAGG-------------AAATTGCAGACAAGAA----------------------------------------------------------------------------2511.00100000000000010000
..................................................................................................................................................TAGTTAAGCAAAAGGGAAAGG-------------AAG.........................................................................................2411.00100010000000000000
...............................................................................................................CATTC-TGATTCAGTGGAA..............................................................................................................................................1811.00100000000001000000
........................................CTCCAACTGAGTTAATGTTTAACCGAG.............................................................................................................................................................................................................2711.00100000001000000000
.....................................................................................................................TGATTCAGTGGAAAAATATAGAGAAA.................................................................................................................................2611.00100000000000010000
...........................................................................................................................................GAATGTATAGTTAAGCAAAAGGGA.............................................................................................................2411.00100000000010000000
........................................................................................................................TTCAGTGGAAAAATATAGAGAATGTAT.............................................................................................................................2711.00100000010000000000
droSec2
TTGATGTACAATGTAACCCCACATGGAACAACAGGGTCAGCACCCACAAAGCTAATGTTCAGCAGAGTCATCCGTGACAAAATACCAGGCATTGGGGATATCTACGAGAAAACCTT-AGACTCTGGGGAAAGAGATAAAGACATTATTGAAAAATATAAGGGAAAGC-------------AGGCAGCCGACAAAAG----------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................TACCAGGCATTGGGGATATCTACGAGA...................................................................................................................................................................2712.0022000
..........................................................TCAGCAGAGTCATCCGTGACAAAAT.............................................................................................................................................................................................25110.1822000
...........TGTAACCCCACATGGAACAACAGGGTC..........................................................................................................................................................................................................................................27160.1321010
......................................................................TCCGTGACAAAATACCAGGCATTGGGGA..............................................................................................................................................................................2880.1311000
..................................................................................TACCAGGCATTGGGGATATCTACGA.....................................................................................................................................................................25100.1011000
..........................................................TCAGCAGAGTCATCCGTGACAAAA..............................................................................................................................................................................................24110.0910001
.............................................................................................................AAACCTT-AGACTCTGGGGAA..............................................................................................................................................20120.0811000
.......................................................................................................................................TAAAGACATTATTGAAAAATATAAG................................................................................................................25150.0710010
........................................................................................................................................AAAGACATTATTGAAAAATATAAGG...............................................................................................................25150.0710010
droYak3
CTAATGCATAATGTGACTCCCCATGGAACCACAGGGATAGCCCCAACCCGATTAATGTTTAATAGGATAATACGCGATAAATTACCAGGGATAGAAGAATTAAATGAACAGTTCAC-AGATTCTGCGGAAAGAGATAGAGATATCATCCAAAAAGAACAAG-AGAGA-------------ACGCTATAGTCGAGTT---------CCCCGACTATCTGATACCCGTTACTCAGC--------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........TGTGACTCCCCATGGAACCACAGGGA...........................................................................................................................................................................................................................................2661.00601000000005
...............................................................................................................TTCAC-AGATTCTGCGGAAAGAGATAG......................................................................................................................................2630.33101000000000
.................TCCCCATGGAACCACAGGGATAGCCC.....................................................................................................................................................................................................................................2660.33201100000000
..................................................................................................ATTAAATGAACAGTTCAC-AGATT......................................................................................................................................................2340.25100100000000
..................CCCCATGGAACCACAGGGATAGCCC.....................................................................................................................................................................................................................................2560.17100100000000
...........................................................................................TAGAAGAATTAAATGAACAGTTCAC-A..........................................................................................................................................................2660.17101000000000
..................................................................................TACCAGGGATAGAAGAATTAAATGAA....................................................................................................................................................................2660.17110000000000
......CATAATGTGACTCCCCATGGAACCA.................................................................................................................................................................................................................................................2560.17101000000000
.TAATGCATAATGTGACTC.............................................................................................................................................................................................................................................................1860.17101000000000
.............TGACTCCCCATGGAACCACAGGGATA.........................................................................................................................................................................................................................................2660.17101000000000
.....................................................................................................................................................................................CGCTATAGTCGAGTT---------CCCCGACTATCT.......................................................27200.10200200000000
.............................................................................................GAAGAATTAAATGAACAGT................................................................................................................................................................19140.07100000010000
droEre2
TTCATGTACAATGTAACCCCACATGGAACAACAGGGGCAGCGTCCACAAAGCTTATGTTCAACAGAGTTATCCGTGACAAACTACCAGGCATTGGGGAGATCTGAAAGAGAACCTT-GGACTCTGGGGAAAGAGATAGAGACGTAATTGAAAAATGTAAGGGAAAGC-------------AAACAGCCGACAAAAG----------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
A-------------------------------------------------------------------------------------------------------------------------------------------------------AACAAAAAAAAAAAA-------------ACGACGTAAGTAATCA-----TTTTAATAAGATCTCTGAT----------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
G------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAAGAGGAAAAA-------------AAGTGGCAGCCAAATT-----GCTCCTCGATATCTTTTAT----------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CTGATGTATAATGTAACCCCTCATGGGACCACAGGCTCCGCTCCTACAGAGCTGATGTTCAATCGAGTCATTAGGGATAAAATCCCGGGAATACAAGATTTAGTGGGAGTGTTTAC-AGACTCAGCGGAAAGGGATAATGACTGCATCAATAAACAAAAGGGAAAGG-------------AAACTGCAGATAAAAG----------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................TACAGAGCTGATGTTCAATCGAGTCAT.........................................................................................................................................................................................................2790.33301020
.................................................................................................................TAC-AGACTCAGCGGAAAGGGAT........................................................................................................................................2270.29202000
....................................................TGATGTTCAATCGAGTCATTAGGGA...................................................................................................................................................................................................2590.22200020
..................................................................................................................................................TCAATAAACAAAAGGGAAAGG-------------AAAC........................................................................................25100.20202000
..............................................................................................................................................TGCATCAATAAACAAAAGGGAAAGG-------------AA..........................................................................................27100.20202000
.................................................................................................................TAC-AGACTCAGCGGAAAGGGATAATGA...................................................................................................................................2760.17101000
............................................................................................ACAAGATTTAGTGGGAGTGTTTAC-AG.........................................................................................................................................................2670.14101000
...........................................................................................TACAAGATTTAGTGGGAGTGTTTAC-A..........................................................................................................................................................2670.14100010
...........................................................................................................AGTGTTTAC-AGACTCAGCGGAAAG............................................................................................................................................2470.14101000
............................................................................................ACAAGATTTAGTGGGAGTGTTTA.............................................................................................................................................................2370.14101000
..........................................................................................................................................TGACTGCATCAATAAACAAAAGGGAA............................................................................................................2690.11101000
.........................................TCCTACAGAGCTGATGTTCAATCGAG.............................................................................................................................................................................................................2690.11101000
............................................TACAGAGCTGATGTTCAATCGAGTCA..........................................................................................................................................................................................................2690.11100010
.....................................................................................CGGGAATACAAGATTTAGTGGGAG...................................................................................................................................................................2490.11101000
............................................................AATCGAGTCATTAGGGATAAAAT.............................................................................................................................................................................................2390.11101000
........................................................................................................................................................AACAAAAGGGAAAGG-------------AAACTGCAGA..................................................................................2590.11101000
....................................................TGATGTTCAATCGAGTCATTAGGG....................................................................................................................................................................................................2490.11101000
.......................................................TGTTCAATCGAGTCATTAGGGATAAAA..............................................................................................................................................................................................2790.11101000
...............................................................................................................................................GCATCAATAAACAAAAGGGAAAGG-------------AAA.........................................................................................27100.10101000
..................................................................................................................................................TCAATAAACAAAAGGGAAAGG-------------AAA.........................................................................................24100.10101000
..............................................................................................................................................TGCATCAATAAACAAAAGGGAAAGG-------------............................................................................................25100.10101000
...............................................................................................................................................GCATCAATAAACAAAAGGGAAAGG-------------AA..........................................................................................26100.10101000
.......ATAATGTAACCCCTCATGGGACCACA...............................................................................................................................................................................................................................................26110.09101000
.....................CATGGGACCACAGGCTCCGCT......................................................................................................................................................................................................................................21120.08110000
.............................CACAGGCTCCGCTCCTACAGAGCTGA.........................................................................................................................................................................................................................26120.08100010
droVir3
GAAACG------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGAAAAG-------------AAGAAGCAGGAGGCCT--------CCCTGACCCCATT-------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................AAAG-------------AAGAAGCAGGAGGA..............................................................................18100.101000000000000000000000000000000000000010000000000000000000000000
droMoj3
CTGATGTACAATGTAACCCCTCATGGAACCACAGGCACCGCTCCTACTGAGTTAATGTTCAATCGAGTAATTAGGGACAAGATTCCAGGAATACAAGATTTAGTAGGGGAGTTCGC-TGACTCAGCGGAAAGGGATAAAGATTGCATTAATAAACAGAAGGGGAAGG-------------AAGTTGCAGACAAGAG----------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................CAATCGAGTAATTAGGGACAAGA..............................................................................................................................................................................................2311.001100000
droGri2
TCCAAGGGCAATGCCA-----------------------------------------------------------------------------------------------------AAAATATGCCGCAAGAAAAAAAAAATGTATATAGATACAAATGAAAAAAG-------------AA------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:00 AM