dan_995

Name	Class	Family	Strand
DIVER2_I-int	LTR	Pao	+

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GACGACGATGACGGAGTGTGTCGGGTGAGGGCGGAGTCCGGAGCTACAAGGTGGGCAGTCATTAATTTGCGCCTGCTGCCCCTTCATGATGCTGTTGAAAGCTCATCTTCCAACGGGGAGAGTATGTCGGGTCAAGCTGCCGCCGGTCACGCAGCTTGGCCGGCAATAATTTATTGAACTCGTGACGTCACTTTCTTTTAAGTTTATGTCTCTTTTCGTGTCGCCCGTTCTCGTGCATTCGTCATGCACTA **********************************************************************************************************....(((((...((((((((((.(((((((((..........)))))))))))))))......))))...)))))........**********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M044 female body	V055 head	V039 embryo	M058 embryo	V105 male body
............................................................................................................TCCAACGGGGAGAGTATGTCGGGTCA.....................................................................................................................	26	0	4	0.25	1	1	0	0	0	0
............................................................................................................TCCAACGGGGAGAGTATGTCGGGTCAA....................................................................................................................	27	0	4	0.25	1	1	0	0	0	0
.................................................GATAGGCCGTCATTAATTTG......................................................................................................................................................................................	20	3	5	0.20	1	1	0	0	0	0
....................TAGGGAGAGGGCGGAGTC.....................................................................................................................................................................................................................	18	2	6	0.17	1	0	1	0	0	0
.............................................................................................................................................GGCGGTCACGAACCTTGGC...........................................................................................	19	3	9	0.11	1	1	0	0	0	0
..................................................ATAGGCCGTCATTAATTTG......................................................................................................................................................................................	19	3	20	0.10	2	1	0	0	0	1
........................GTGAGGGCATCGTCCGGAGC...............................................................................................................................................................................................................	20	3	12	0.08	1	0	0	1	0	0
................TGGGTCGGGTGACGGCGG.........................................................................................................................................................................................................................	18	2	14	0.07	1	0	1	0	0	0
......................................................................................................................TAAGTATGTCGGGACAAGCTG................................................................................................................	21	3	19	0.05	1	0	1	0	0	0
.........................TGATGGCGGAGTTCGGGGC...............................................................................................................................................................................................................	19	3	20	0.05	1	1	0	0	0	0
.........................................................................................................................................................................TTTATTGAACTCGTGACGTCAC............................................................	22	0	20	0.05	1	0	0	0	1	0
.........................................................................................................................................................................TTTATTGAACTCGTGACGTCACTT..........................................................	24	0	20	0.05	1	1	0	0	0	0
...............................................................................................................AAAGGGGAGAGTAGGTC...........................................................................................................................	17	2	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................................TATTGAACTCGTGACGTCACTTTCT.......................................................	25	0	20	0.05	1	1	0	0	0	0

CTGCTGCTACTGCCTCACACAGCCCACTCCCGCCTCAGGCCTCGATGTTCCACCCGTCAGTAATTAAACGCGGACGACGGGGAAGTACTACGACAACTTTCGAGTAGAAGGTTGCCCCTCTCATACAGCCCAGTTCGACGGCGGCCAGTGCGTCGAACCGGCCGTTATTAAATAACTTGAGCACTGCAGTGAAAGAAAATTCAAATACAGAGAAAAGCACAGCGGGCAAGAGCACGTAAGCAGTACGTGAT **********************************************************....(((((...((((((((((.(((((((((..........)))))))))))))))......))))...)))))........**********************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M044 female body	M058 embryo	V055 head	V106 head
..........................................................................CGACGGGGAAGTACTACGACAAC..........................................................................................................................................................	23	0	20	0.55	11	0	11	0	0
.........................................................................................................................................................CGAACCGGCCGTTATTAAATAACT..........................................................................	24	0	4	0.25	1	1	0	0	0
..............................................................................GGGGAAGTACTACGACAAC..........................................................................................................................................................	19	0	20	0.25	5	4	1	0	0
..............................................................................................................GTTGCCCCTCTCATACAGCCCA.......................................................................................................................	22	0	6	0.17	1	1	0	0	0
........................................................................GACGACGGGGAAGTACTACGACAAC..........................................................................................................................................................	25	0	20	0.15	3	3	0	0	0
...........................................................................................................................................................................................AGCGAAAGAAACTTCAAATAT...........................................	21	3	15	0.07	1	0	0	1	0
....................................................................CGCGGACTCCGGGGATGTA....................................................................................................................................................................	19	3	15	0.07	1	1	0	0	0
................ACCAAACCCACTCCCGCCTC.......................................................................................................................................................................................................................	20	3	17	0.06	1	0	1	0	0
................................................................AACGCGCGGACGACGGGGAA.......................................................................................................................................................................	20	3	20	0.05	1	1	0	0	0
..........................................................................................................................................................................................................AAAGACAAAGAAAAGCACAG.............................	20	2	20	0.05	1	0	1	0	0
................................................................................GGAAGTACTACGACAACTTT.......................................................................................................................................................	20	0	20	0.05	1	0	1	0	0
.............................................................................CGGGGAAGTACTACGACAAC..........................................................................................................................................................	20	0	20	0.05	1	0	0	0	1
.................................................................................................................................................................CCGTTATTAAATAACTTGAGCACTGCAC..............................................................	28	1	20	0.05	1	0	1	0	0

Species	Coordinate	ID	Alignment
droAna3	scaffold_12947:920147-920397 +	dan_995	GACG--------------ACGATGACGGAGTGTGTCGGGTGAGGGCGGAGTCCGGAGCTACAAGGTGG-GCAGTCATTAATTTGCGCCTGCTGCCCCTTCATGATGCTGTTGAAAGCTC--ATCTTCCAACGGGGAGAGTATGTCGGGTCAAGCTGCCG---CCGGTCA---C-GCAGCTTGGCCGGCAATAATT-----------TATTGAACTC--------------------------------------GTG----A-------------CGTCACTTT-CTTTTAA-------------------------GTTTATGTCTCTTTTC----G-TGTCGCC----CGTTCTCGTGCA----TTCGTCATGCACTA
droBip1	scf7180000395058:32225-32463 -		GATG--------------GAATCTTTCAAGTGGCGGTGATAAAAACCTCATCTGGAGTTACCAAGCGA-GCAGTGACTAAGCTGTGCCTTTTGCCCCTTAAGGATGAAGTTGCAGTATA--AGCCCCAACTGGGGGGAGAATGTCGGGTCAAGCAGCTA---ACGACTAA-----------------TTTAAACATAATAATTAATAAT-CAAC-----------------------------------------TG----A-------------TGTTTGTTG-GTCGCAA-------------------------GC---CGACTCTCTTT----C-GG----CCGCTCGGCTTT----AGTAATTCGGC---ATTTA
droKik1	scf7180000301006:5447-5634 -		G------------------------------------------------------------------G-GCAGTTGCTAAGCTGTGTGTGCTGCCGAAGCAGGACGAAGTTGAAAGCCCGTATCTTCCAACGGGGGGAGAATGTCTGGTTATGCAGCCC---ACACCTGATGACCCAGC--TGCCAAACAACAAC-----------AAT-AAATTT--------------------------------------GCCCTTC------------------------GTAGCAA--AGCT----------------------T-TGCCTCTC----TTCC-TA----CCT----TCTGC----A----TAACATAAACTTTA
droFic1	scf7180000454108:63596-63739 -		GATG--------------GAGTTGCTCGAGTTGCCGTACTCAAGACAACATCTGAAGTGACAAAACGAGACAGTTAATAAGCTGTGTCTGCTGCCCCTTAAGGATGCTGTTGAAAGCCA--GGCTTCCAACGGGGGGAGTATGTCGGGTCATCCAGACG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1	scf7180000490671:5797-5919 -		GACG--------------GCGTCGTCAGAGTAGCTGTGGTCTGGACAGCTACAGGTCTTACCAAAAGG-GCCGTCACTTAACTAGCCATCGAGTCCC------ATTTAGTTGGAACCGCGCCTCTTCCAACGGGGGGAGTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000773321:16442-16586 -		GACG---------AGATGGTGTTTGCCGAGTTGCTGATCTGAAAACGTCCACCGGTGACATCAGGAGA-GCTGTCAATAAGTTGTGCCTGCTGCCCATCAATGATGAAGTTGAAAGACC--GGCTTCCAACGGGGGGAGTATGTTGAGCGCAGCGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1	scf7180000301914:18201-18357 +		AACTGTTCGGTGAAGATGGGGTTGCTCCAGTTGCCTTTCTGAAGACAGCGTCAGAAGTGACAAAGCGT-GCAGTAAATAAGCTGTGTCTGCTTCCCCTTAGGGATGATGTTGAAACCCA--AGCTTCCAACGGGGGGAGTGTGTCGGGTCACGCAGCCG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415186:26876-27121 -		GATG--------------GCGTTGCTTGAGTTGCCGTTCTGAAGACAGCGTCAGGAGTGACAATGCGA-GCAGTAAACAAGCTATGTCTGCTGCCTCTTAAGGATGATGTTGAAAACCA--GGCTTCCAACGGGGGGAGTAAGTCGGATCACGCAGCCG---CTGC---------------GGCGAATTATAATT-----------AATT-AACTT--------------------------------------GTA----AACCCGTACTCCTGTATTAATTGCATCGCGAAAGG-C---------------------------ATCTCTCTCTAT-----CTACCT----CTCTC----A----TTTGTTCTATACTT
droEug1	scf7180000408857:13869-13980 -		TCTG--------------G-------------------------------------ATCACAAAGCGG-GAAGTGACAAGGTTGTGTCTGCTTTCCCTCAAGGACTCTGTTGAAGGGCC--AGCCTCCAACGGGGGGAGGATGTTGGGCCAAGCAGCTA---AAGATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3	chr2L:22956646-22956789 +		GACG--------------ACGTCGCTCGAGTTGCAGAATTGAGGACCGCGTCTGGAGTAATAAGGCGG-GCAGTGACCAAGCTGTGTCTGCCTCCCCTTGAGGACTCTGTTGGAAGCCA--AGCTTCCAACGGGTGGAGGATATTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2	node_11962:279-422 +		GACG--------------GCATCGCTCGAGTTTCAGAATTGAGGACCGCTTCTGGAGTAATAGGGCGG-GCAGTGAACAAGCTGTGTCTGCTTCCCCTTGAGGACTCTGTTGGAAGCCA--AGCTTCCAACGGGGGGAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2	scaffold_2700:2085-2228 +		GACG--------------GCGTCGCTCGAGTTGCAGAATTGGGGACCGCGTCTGGAGTAATAAGGCGG-GCAGTGAACAAGCTGTGTCTGCTTCCCCTTGAGGACTCTGTTGGAAGCCA--AGCTTCCAACGGGGGGAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3	v2_chrUn_3671:384-527 +		GACG--------------GCGTCGCTCGAGTTGCAGAATTGAGGACCGCATCCGGAGTAGTAAGGCGG-GCAGTGAGCAAGCTGTGTCTGCTTCCCCTTGAGGACTCTGTTGAAAGCCA--AACTTCCAACGGGGGGAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4845:83151-83305 +		AGAG-----------ATAGAGTCGCCAGAGTTTCTGTACTGAGGACAGCAATAGGATTGACGAAGTGG-GCAGTGAAT-AGCTGTGCCTACTACCCCTTAAGGATGCTGTTGAAAGCCG--CGCTTCCAACAGGGGGAGTATGTCGGCTCTCGAAGCCGCCATCAGTTG---C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5	Unknown_singleton_862:1415-1554 +		GATG--------------GCGTTTCCCGAGTTGCTGTGCTGAAGACGTCATCTGGAATCACCAAGCGC-GCAGTCAACAAGCTGTGCCTGCTGCCCCTTAAAGATGCTGTTGAAAGTCA--GGCTTCCAACGGGGGGAGTATGTCGGGTCAAGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_213:5960-6099 -		GATG--------------GCGTTGCCCGAGTTGCTGTGCTGAGGACGTCATCTGGAATCACCAAGCGC-GCCGTCAACAAGCTGTGCCTGCTGCCCCTTAAAGATGCTGTTGAAAGTCA--GGCTTCCAACGGGGGGAGTATGTCGGGTCAAGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2	scf2_1100000004585:4820343-4820396 -		TTTC--------------TTTTATTTTTAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTT-GTAT----CGCCCG----CTCGCTTGCG----TGCG-----CCTTG
droVir3	scaffold_13050:3174071-3174267 +		G-----------------------------------------------------GAATCATAAAGTGA-GCAACTAATAAGCAGTGACTGCTTCCTCTTAATGATCCTGTTCAAGCTCA--ATCCTTCAACGGGGGGAGTATGTTCGGCTAAGCAGCTA---AAAATTA---A-----------------------------------AT-AAGTACTA-TGTTGGCATAACATTTCAGTTACATATT------GAATTGC------------------------GTGACAA--GG-AATGTCACCATTTCTTTTTTGTTTGGG---------------------------------------------------TTTCT
droMoj3	scaffold_6111:26347-26572 -		GGCG--------------AA---------------------------------------ATTAGAAGA-GCTACAAATAAGCTGTGCTTGCTGCCCCTTAAGGATTCTGTTGAAGACTA--AGTCTTCAACGGGGGGAGGATGTTGGGCTCAGCAATCA---TCGCTTCA-----------------TTGTAATT----------------AAGAGCGGCAGTTCATAGAATATGTTATCATTTAAGAGAATTTGTA----A-------------C-------------------G-GAGATCACGCTCTCTCTTTTGCGT-TGTCTCTT----TCACCCACCGCC----GGCTCGCGTACA-------------T---T

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droAna3

GACG--------------ACGATGACGGAGTGTGTCGGGTGAGGGCGGAGTCCGGAGCTACAAGGTGG-GCAGTCATTAATTTGCGCCTGCTGCCCCTTCATGATGCTGTTGAAAGCTC--ATCTTCCAACGGGGAGAGTATGTCGGGTCAAGCTGCCG---CCGGTCA---C-GCAGCTTGGCCGGCAATAATT-----------TATTGAACTC--------------------------------------GTG----A-------------CGTCACTTT-CTTTTAA-------------------------GTTTATGTCTCTTTTC----G-TGTCGCC----CGTTCTCGTGCA----TTCGTCATGCACTA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................................................................................................................TCCAACGGGGAGAGTATGTCGGGTCA.....................................................................................................................................................................................................................................	26	4	0.25	1	1	0	0	0	0	0
.............................................................................................................................TCCAACGGGGAGAGTATGTCGGGTCAA....................................................................................................................................................................................................................................	27	4	0.25	1	1	0	0	0	0	0
.................................................................................................................................................................................................TT-----------TATTGAACTC--------------------------------------GTG----A-------------CGTCAC...................................................................................................	22	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................................................................................TT-----------TATTGAACTC--------------------------------------GTG----A-------------CGTCACTT.................................................................................................	24	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................................TATTGAACTC--------------------------------------GTG----A-------------CGTCACTTT-CT.............................................................................................	25	20	0.05	1	1	0	0	0	0	0

droBip1

GATG--------------GAATCTTTCAAGTGGCGGTGATAAAAACCTCATCTGGAGTTACCAAGCGA-GCAGTGACTAAGCTGTGCCTTTTGCCCCTTAAGGATGAAGTTGCAGTATA--AGCCCCAACTGGGGGGAGAATGTCGGGTCAAGCAGCTA---ACGACTAA-----------------TTTAAACATAATAATTAATAAT-CAAC-----------------------------------------TG----A-------------TGTTTGTTG-GTCGCAA-------------------------GC---CGACTCTCTTT----C-GG----CCGCTCGGCTTT----AGTAATTCGGC---ATTTA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

G------------------------------------------------------------------G-GCAGTTGCTAAGCTGTGTGTGCTGCCGAAGCAGGACGAAGTTGAAAGCCCGTATCTTCCAACGGGGGGAGAATGTCTGGTTATGCAGCCC---ACACCTGATGACCCAGC--TGCCAAACAACAAC-----------AAT-AAATTT--------------------------------------GCCCTTC------------------------GTAGCAA--AGCT----------------------T-TGCCTCTC----TTCC-TA----CCT----TCTGC----A----TAACATAAACTTTA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GATG--------------GAGTTGCTCGAGTTGCCGTACTCAAGACAACATCTGAAGTGACAAAACGAGACAGTTAATAAGCTGTGTCTGCTGCCCCTTAAGGATGCTGTTGAAAGCCA--GGCTTCCAACGGGGGGAGTATGTCGGGTCATCCAGACG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GACG--------------GCGTCGTCAGAGTAGCTGTGGTCTGGACAGCTACAGGTCTTACCAAAAGG-GCCGTCACTTAACTAGCCATCGAGTCCC------ATTTAGTTGGAACCGCGCCTCTTCCAACGGGGGGAGTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GACG---------AGATGGTGTTTGCCGAGTTGCTGATCTGAAAACGTCCACCGGTGACATCAGGAGA-GCTGTCAATAAGTTGTGCCTGCTGCCCATCAATGATGAAGTTGAAAGACC--GGCTTCCAACGGGGGGAGTATGTTGAGCGCAGCGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AACTGTTCGGTGAAGATGGGGTTGCTCCAGTTGCCTTTCTGAAGACAGCGTCAGAAGTGACAAAGCGT-GCAGTAAATAAGCTGTGTCTGCTTCCCCTTAGGGATGATGTTGAAACCCA--AGCTTCCAACGGGGGGAGTGTGTCGGGTCACGCAGCCG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GATG--------------GCGTTGCTTGAGTTGCCGTTCTGAAGACAGCGTCAGGAGTGACAATGCGA-GCAGTAAACAAGCTATGTCTGCTGCCTCTTAAGGATGATGTTGAAAACCA--GGCTTCCAACGGGGGGAGTAAGTCGGATCACGCAGCCG---CTGC---------------GGCGAATTATAATT-----------AATT-AACTT--------------------------------------GTA----AACCCGTACTCCTGTATTAATTGCATCGCGAAAGG-C---------------------------ATCTCTCTCTAT-----CTACCT----CTCTC----A----TTTGTTCTATACTT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TCTG--------------G-------------------------------------ATCACAAAGCGG-GAAGTGACAAGGTTGTGTCTGCTTTCCCTCAAGGACTCTGTTGAAGGGCC--AGCCTCCAACGGGGGGAGGATGTTGGGCCAAGCAGCTA---AAGATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

GACG--------------ACGTCGCTCGAGTTGCAGAATTGAGGACCGCGTCTGGAGTAATAAGGCGG-GCAGTGACCAAGCTGTGTCTGCCTCCCCTTGAGGACTCTGTTGGAAGCCA--AGCTTCCAACGGGTGGAGGATATTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................TCGAGTTGCAGAATTGAGGACCGC...........................................................................................................................................................................................................................................................................................................................................	24	20	81.45	1629	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	1	0	0	0	0	0	5	2	7	0	5	1	10	0	0	0	0	0	0	5	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	2	0	0	0	0	0	1	0	1	0	0	9	2	9	13	0	0	0	0	0	0	0	0	0	2	0	0	1	13	2	0	0	5	0	0	1	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	19	0	1	0	0	0	2	7	7	0	0	0	2	9	11	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	0	0	0	12	0	0	0	0	0	0	118	0	50	5	0	16	0	22	0	26	10	0	0	0	0	0	2	13	0	0	0	0	0	0	0	0	0	63	0	10	42	218	1	213	4	139	254	0	2	0	0	0	0	0	0	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	1	0	0	0	0	57	6	46	2	0	4	7	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	5	8	15	0	13	0	0	0	0	0	0
...............................TGCAGAATTGAGGACCGCGTCTGGAG...................................................................................................................................................................................................................................................................................................................................	26	20	34.05	681	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	6	0	4	0	4	0	2	0	0	0	2	0	3	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	4	0	0	0	0	0	0	0	6	0	0	2	0	0	0	2	0	0	0	0	0	0	3	0	0	7	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	4	0	0	0	0	0	2	6	2	9	3	0	9	0	4	1	2	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	16	2	68	20	0	1	0	5	0	0	12	0	0	0	0	1	0	0	0	10	2	12	6	62	0	0	0	29	1	0	11	18	0	0	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	1	3	1	0	0	8	0	0	34	0	2	7	5	0	0	54	20	12	0	0	0	0	0	0	0	0	0	0	0	2	0	4	0	19	10	20	0	0	0	0	0	0
...............................TGCAGAATTGAGGACCGCGTCTG......................................................................................................................................................................................................................................................................................................................................	23	20	31.50	630	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	7	0	0	0	3	0	4	0	2	0	0	0	2	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	2	0	0	0	0	2	0	0	10	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	10	8	5	0	0	14	0	0	0	0	0	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	60	8	0	0	0	9	2	20	13	160	104	0	0	0	0	0	0	4	0	0	0	1	0	0	0	0	0	7	0	6	5	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	3	6	12	38	2	0	0	0	0	0	15	16	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0
.........................TCGAGTTGCAGAATTGAGGACCGCGT.........................................................................................................................................................................................................................................................................................................................................	26	20	29.15	583	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	2	0	0	0	0	4	3	0	0	5	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	2	0	1	0	0	0	0	6	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	25	1	0	6	114	0	92	0	59	113	65	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	3	0	6	0	17	4	9	0	0	0	0	0	0
.........................TCGAGTTGCAGAATTGAGGACCGCG..........................................................................................................................................................................................................................................................................................................................................	25	20	21.25	425	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	6	1	0	0	0	8	0	2	0	0	0	1	0	1	0	4	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	2	0	0	0	0	0	5	0	1	0	0	0	0	0	2	0	1	0	0	0	16	0	0	0	0	0	3	0	86	3	0	2	44	112	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	3	8	1	6	0	0	0	1	0	0	11	10	12	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	16	11	0	0	0	0	0	0	0
.........................TCGAGTTGCAGAATTGAGGACCGCGTC........................................................................................................................................................................................................................................................................................................................................	27	20	18.15	363	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	13	6	0	1	0	7	0	0	0	0	0	1	3	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	2	0	0	0	0	0	0	0	2	0	0	0	3	0	0	0	0	0	12	0	0	0	0	0	43	1	40	94	77	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	4	3	0	0	0	0	0	0	5	2	4	0	0	0	0	0	0	0	0	0	0	0	2	0	2	6	0	0	5	0	0	0	0	0	0
...............................TGCAGAATTGAGGACCGCGTCTGG.....................................................................................................................................................................................................................................................................................................................................	24	20	15.85	317	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	12	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	12	0	0	5	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	21	1	29	9	0	0	0	1	0	36	9	0	0	0	0	0	0	1	0	0	0	2	0	7	0	0	0	3	0	0	1	1	1	6	0	6	16	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	2	1	0	0	0	0	11	25	1	0	7	2	0	0	15	9	5	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	2	4	0	0	0	0	0	0
................................................................................GCTGTGTCTGCCTCCCCTTGAGGACTC.................................................................................................................................................................................................................................................................................	27	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
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..........................................................................................................................GCTTCCAACGGGTGGAGGATATT...........................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................AATAAGGCGG-GCAGTGACCAAGCT.........................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................TTCCAACGGGTGGAGGATATTGGGTCATG...................................................................................................................................................................................................................................	29	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................TGGAGGATATTGGGTCATGCAGCC..............................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................ACGGGTGGAGGATATTGGGTCATGC..................................................................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................GCTTCCAACGGGTGGAGGATATTGGGTC......................................................................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................ATAAGGCGG-GCAGTGACCAA............................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TGGAAGCCA--AGCTTCCAACGGGTGGAG.................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

GACG--------------GCATCGCTCGAGTTTCAGAATTGAGGACCGCTTCTGGAGTAATAGGGCGG-GCAGTGAACAAGCTGTGTCTGCTTCCCCTTGAGGACTCTGTTGGAAGCCA--AGCTTCCAACGGGGGGAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	25	20	608.35	12167	0	0	4	0	0	0	818	0	3708	2244	61	0	4993	339	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	26	20	381.70	7634	0	0	5	1	0	0	769	1896	1404	722	45	0	2589	203	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	26	20	251.80	5036	0	0	3	0	0	0	238	1107	1180	855	25	0	1527	101	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	25	20	244.80	4896	1	10	217	28	0	0	2334	498	371	57	1277	7	85	11	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	25	20	218.90	4378	0	0	4	0	0	0	446	0	1710	1010	30	0	1130	48	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	24	20	185.70	3714	0	0	0	0	0	0	378	977	0	721	33	1	1505	99	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	26	20	165.80	3316	0	12	533	71	0	0	1133	169	0	29	1340	23	3	3	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	26	20	83.45	1669	0	0	14	14	0	0	416	405	246	235	33	1	278	27	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGCCA--...................................................................................................................................................................................................................................................................	28	20	57.90	1158	0	0	4	2	0	0	57	84	55	86	2	0	793	75	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	24	20	51.55	1031	1	8	220	27	0	84	0	612	0	65	0	2	0	12	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTGTTGGA..........................................................................................................................................................................................................................................................................	26	20	50.35	1007	0	0	4	25	0	0	284	372	111	130	53	0	27	1	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	27	20	50.20	1004	1	0	1	0	0	0	247	433	284	0	0	0	34	4	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	23	20	46.45	929	0	0	36	23	84	0	367	68	141	21	162	4	22	1	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	27	20	43.80	876	0	0	1	0	0	0	56	248	102	87	3	0	343	36	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AG.................................................................................................................................................................................................................................................................	23	20	33.80	676	0	0	0	0	0	0	44	92	144	74	6	0	281	35	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTCCC............................................................................................................................................................................................................................................................................................	25	13	27.23	354	0	0	0	0	0	0	25	95	96	79	0	0	55	4	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCA...............................................................................................................................................................................................................................................................	25	20	22.80	456	0	0	0	0	0	0	0	9	5	5	0	0	425	12	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AG.................................................................................................................................................................................................................................................................	24	20	17.80	356	0	0	0	0	0	0	27	116	110	80	1	0	0	22	0	0	0
.......................................TGAGGACCGCTTCTGGAGTAATAGGGC..........................................................................................................................................................................................................................................................................................................................	27	1	17.00	17	0	0	0	0	0	0	2	10	3	2	0	0	0	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTCCCC...........................................................................................................................................................................................................................................................................................	26	13	16.46	214	0	0	0	0	0	0	8	64	19	50	0	0	69	4	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	26	20	16.05	321	0	0	0	0	0	0	3	10	3	1	0	0	265	39	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCT................................................................................................................................................................................................................................................................................................	21	16	16.00	256	0	0	0	0	0	0	1	1	2	5	0	0	133	114	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGCC......................................................................................................................................................................................................................................................................	27	20	15.05	301	0	0	3	0	0	0	16	19	17	20	5	0	194	27	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTA..............................................................................................................................................................................................................................................................	26	20	14.20	284	0	0	0	0	0	0	0	7	10	8	0	0	253	6	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTGTTGGAA.........................................................................................................................................................................................................................................................................	27	20	13.75	275	0	0	0	1	0	0	35	42	46	70	4	0	69	8	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTC...............................................................................................................................................................................................................................................................................................	22	16	13.56	217	0	0	0	0	0	0	0	0	1	1	0	0	181	34	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTA.................................................................................................................................................................................................................................................................................................................................	24	1	13.00	13	0	0	0	0	0	0	7	6	0	0	0	0	0	0	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTAA................................................................................................................................................................................................................................................................................................................................	25	1	13.00	13	0	0	0	0	0	0	5	5	0	3	0	0	0	0	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	29	20	12.90	258	0	0	1	2	0	0	1	5	1	2	2	0	220	24	0	0	0
............................................................TAGGGCGG-GCAGTGAACAAGCTGTGTC....................................................................................................................................................................................................................................................................................................	27	1	12.00	12	0	0	0	0	0	0	8	1	2	1	0	0	0	0	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGCCA--...................................................................................................................................................................................................................................................................	25	20	11.10	222	0	0	1	0	0	0	12	60	20	26	0	0	76	27	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTCCCCT..........................................................................................................................................................................................................................................................................................	27	12	10.33	124	0	0	0	1	0	0	2	41	11	31	0	0	38	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTCCCT...........................................................................................................................................................................................................................................................................................	26	13	10.23	133	0	0	0	0	0	0	9	22	52	47	0	0	3	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCA...............................................................................................................................................................................................................................................................	26	20	9.50	190	0	0	0	0	0	0	0	6	5	0	0	0	172	7	0	0	0
............................................................................................TCCCCTTGAGGACTCTGTTGGAAGCCA--...................................................................................................................................................................................................................................................................	27	20	9.45	189	0	0	1	1	0	0	15	19	29	23	2	0	89	10	0	0	0
............................................................................................TCCCCTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	30	20	9.25	185	0	0	0	0	0	0	33	40	21	10	0	0	75	6	0	0	0
............................................................................................TCCCCTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	25	20	8.80	176	0	0	0	0	0	0	78	50	34	0	7	0	0	7	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--...................................................................................................................................................................................................................................................................	20	20	8.80	176	0	0	0	1	172	0	1	0	0	0	0	0	1	1	0	0	0
............................................................................................TCCCCTTGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	28	20	8.65	173	0	0	1	1	0	0	1	4	4	6	7	0	129	20	0	0	0
......................................................................................TCTGCTTCCCCTTGAGGA....................................................................................................................................................................................................................................................................................	18	20	7.40	148	0	0	0	0	148	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................AGGACTCTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	24	20	7.30	146	0	0	0	4	0	0	3	8	13	14	8	0	96	0	0	0	0
.......................................TGAGGACCGCTTCTGGAGTAATAGGG...........................................................................................................................................................................................................................................................................................................................	26	1	7.00	7	0	0	0	0	0	0	1	3	2	1	0	0	0	0	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGT..................................................................................................................................................................................................................................................................................................................................	23	1	7.00	7	0	0	0	0	0	0	5	1	0	1	0	0	0	0	0	0	0
....................................................................................TGTCTGCTTCCCCTTGAGGACTCTGT..............................................................................................................................................................................................................................................................................	26	17	6.88	117	0	0	0	2	0	68	1	0	5	9	32	0	0	0	0	0	0
............................................................................................................................TTCCAACGGGGGGAGGATGTTGGG........................................................................................................................................................................................................................................	24	9	6.33	57	0	0	0	1	0	0	1	2	3	0	40	0	9	1	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	22	20	6.20	124	0	0	0	0	0	85	1	8	0	0	0	0	22	8	0	0	0
............................................................TAGGGCGG-GCAGTGAACAAGCTGTG......................................................................................................................................................................................................................................................................................................	25	1	6.00	6	0	0	0	0	0	0	5	0	0	0	1	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTCTGGA....................................................................................................................................................................................................................................................................................................................................	25	1	6.00	6	0	0	0	0	0	0	1	0	0	0	0	0	1	4	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTAATA..............................................................................................................................................................................................................................................................................................................................	27	1	6.00	6	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0
.............................................................................................CCCCTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	29	20	5.95	119	0	0	1	0	0	0	2	4	6	8	0	0	93	5	0	0	0
.................................................................CGG-GCAGTGAACAAGCTGTGTCTGC.................................................................................................................................................................................................................................................................................................	25	11	5.91	65	0	0	0	0	0	0	8	6	4	3	39	0	5	0	0	0	0
..............................................................................................................TGGAAGCCA--AGCTTCCAACGGGGGGA..................................................................................................................................................................................................................................................	26	7	5.57	39	0	0	0	0	0	0	7	4	20	8	0	0	0	0	0	0	0
.................................................................CGG-GCAGTGAACAAGCTGTGTC....................................................................................................................................................................................................................................................................................................	22	11	5.55	61	0	0	0	0	59	0	1	0	0	0	1	0	0	0	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGCCA--AG.................................................................................................................................................................................................................................................................	27	20	5.50	110	0	0	0	0	0	0	1	3	2	0	1	0	87	16	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTGTTGGAAG........................................................................................................................................................................................................................................................................	28	20	5.30	106	0	0	0	0	0	0	13	9	10	12	0	0	53	9	0	0	0
......................................TTGAGGACCGCTTCTGGAGTAATAGGG...........................................................................................................................................................................................................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	2	1	2	0	0	0	0	0	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	29	20	4.80	96	0	0	0	0	0	0	6	7	7	9	2	0	63	2	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCTTCC............................................................................................................................................................................................................................................................	27	20	4.35	87	0	0	3	2	81	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................TGTGTCTGCTTCCCCTTGAGGACTC.................................................................................................................................................................................................................................................................................	25	17	4.29	73	0	0	7	6	0	0	3	1	10	6	17	0	22	1	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTGTTGG...........................................................................................................................................................................................................................................................................	25	20	4.20	84	0	0	0	3	0	0	18	13	20	26	4	0	0	0	0	0	0
.........................................................................TGAACAAGCTGTGTCTGCT................................................................................................................................................................................................................................................................................................	19	17	4.18	71	0	0	0	0	71	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TGAGGACCGCTTCTGGAGTAATAG.............................................................................................................................................................................................................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0
.....................TCGCTCGAGTTTCAGAATTGAGGACCGC...........................................................................................................................................................................................................................................................................................................................................	28	1	4.00	4	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAG........................................................................................................................................................................................................................................................................	25	20	4.00	80	0	0	0	0	0	0	11	15	3	8	0	0	37	6	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGAACAAGC..........................................................................................................................................................................................................................................................................................................	29	1	4.00	4	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTCT.......................................................................................................................................................................................................................................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	1	0	1	0	0	2	0	0	0
............................................................TAGGGCGG-GCAGTGAACAAGCTGTGT.....................................................................................................................................................................................................................................................................................................	26	1	4.00	4	0	0	0	0	0	0	1	0	2	1	0	0	0	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTC..............................................................................................................................................................................................................................................................................................	23	13	3.92	51	0	0	0	0	0	0	0	7	4	7	0	0	32	1	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	28	20	3.90	78	0	0	2	0	0	0	0	19	0	27	1	0	0	29	0	0	0
.............................................................................................................................TCCAACGGGGGGAGGATGTTG..........................................................................................................................................................................................................................................	21	9	3.89	35	0	0	0	0	33	0	0	1	0	0	0	0	1	0	0	0	0
............................................................................................................................TTCCAACGGGGGGAGGATG.............................................................................................................................................................................................................................................	19	9	3.89	35	0	0	0	0	33	0	0	0	0	0	2	0	0	0	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTGT..............................................................................................................................................................................................................................................................................	22	20	3.60	72	0	0	0	0	0	71	0	0	0	0	1	0	0	0	0	0	0
........................................................................................TGCTTCCCCTTGAGGACTCTG...............................................................................................................................................................................................................................................................................	21	20	3.60	72	0	0	0	0	71	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................TTCCAACGGGGGGAGGATGTTGGGT.......................................................................................................................................................................................................................................	25	9	3.56	32	0	0	0	0	0	0	1	3	6	3	18	0	1	0	0	0	0
..................................................................................TGTGTCTGCTTCCCCTTGA.......................................................................................................................................................................................................................................................................................	19	20	3.55	71	0	0	0	0	70	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGCC......................................................................................................................................................................................................................................................................	24	20	3.55	71	0	1	0	0	0	0	2	12	12	0	0	0	31	13	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAG........................................................................................................................................................................................................................................................................	22	20	3.45	69	0	0	0	0	0	0	1	0	0	1	0	0	18	49	0	0	0
....................................................................................................AGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	25	20	3.30	66	0	0	0	5	0	0	0	0	0	30	23	0	8	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCTA..............................................................................................................................................................................................................................................................	27	20	3.20	64	0	0	0	0	0	0	0	0	0	1	0	0	61	2	0	0	0
.............................................................................................CCCCTTGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	27	20	3.15	63	0	0	2	0	0	0	1	2	2	1	4	0	42	9	0	0	0
.............................................................................CAAGCTGTGTCTGCTTCCCCTTGAGGAC...................................................................................................................................................................................................................................................................................	28	14	3.07	43	0	0	0	1	0	0	18	11	0	4	2	0	6	1	0	0	0
....................................................................................................AGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	22	20	3.05	61	0	0	0	0	0	0	0	0	0	0	4	0	52	5	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AG.................................................................................................................................................................................................................................................................	22	20	3.00	60	0	0	7	1	0	0	0	11	21	3	0	1	7	9	0	0	0
.....................................ATTGAGGACCGCTTCTGGAGTAATAGGGC..........................................................................................................................................................................................................................................................................................................................	29	1	3.00	3	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGCA......................................................................................................................................................................................................................................................................	27	20	3.00	60	0	0	0	0	0	0	0	0	0	1	0	0	53	6	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTC..............................................................................................................................................................................................................................................................	26	20	3.00	60	0	0	0	0	0	0	3	1	0	2	0	0	47	7	0	0	0
......................................TTGAGGACCGCTTCTGGAGTAATAG.............................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTT.........................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTCTG......................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTAATAG.............................................................................................................................................................................................................................................................................................................................	28	1	3.00	3	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0
.....................TCGCTCGAGTTTCAGAATTGAGGA...............................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTCC.............................................................................................................................................................................................................................................................................................	24	13	2.92	38	0	0	0	0	0	0	2	8	8	11	0	0	9	0	0	0	0
............................................................................................TCCCCTTGAGGACTCTGTTGGAAGCC......................................................................................................................................................................................................................................................................	26	20	2.80	56	0	0	0	0	0	0	1	1	6	1	0	0	40	7	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTA...............................................................................................................................................................................................................................................................................................	22	16	2.56	41	0	0	0	0	0	0	0	0	0	0	0	0	32	9	0	0	0
................................................................................................CTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	26	20	2.55	51	0	0	0	0	0	0	3	11	10	10	6	0	11	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTT...............................................................................................................................................................................................................................................................................................	22	16	2.44	39	0	0	0	0	0	0	0	1	1	5	0	0	27	5	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	23	20	2.35	47	0	0	0	0	0	0	5	9	1	0	1	0	15	16	0	0	0
..................................................................................TGTGTCTGCTTCCCCTTGAGGACTCTG...............................................................................................................................................................................................................................................................................	27	17	2.24	38	0	0	0	5	0	0	3	2	11	13	4	0	0	0	0	0	0
.............................................................................................CCCCTTGAGGACTCTGTTGGAAGCCA--...................................................................................................................................................................................................................................................................	26	20	2.15	43	0	0	1	0	0	0	0	10	11	7	2	0	11	1	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTTA.............................................................................................................................................................................................................................................................	27	20	2.10	42	0	0	0	0	0	0	1	6	1	6	0	0	27	1	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGAACA.............................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGAACAAG...........................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.................................................TTCTGGAGTAATAGGGCGG-GC.....................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...................................GAATTGAGGACCGCTTCTGGAG...................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.........................TCGAGTTTCAGAATTGAGGACCGCTT.........................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.....................................................GGAGTAATAGGGCGG-GCAGTGAACA.............................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
......................................TTGAGGACCGCTTCTGGAGTAATAGGGC..........................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
........................CTCGAGTTTCAGAATTGAGGACCGCTTCTGG.....................................................................................................................................................................................................................................................................................................................................	31	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
................................TCAGAATTGAGGACCGCTTCTGG.....................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.............................GTTTCAGAATTGAGGACCGCTTCTGGA....................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
.......................GCTCGAGTTTCAGAATTGAGGACCGCT..........................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.......................................TGAGGACCGCTTCTGGAGTAATAGG............................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
..................................................TCTGGAGTAATAGGGCGG-GCAGTGAAC..............................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0
........................................GAGGACCGCTTCTGGAGTAATAGGGC..........................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTAAT...............................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
.................................................TTCTGGAGTAATAGGGCGG-GCAGTGAAC..............................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTCTGG.....................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
...............................TTCAGAATTGAGGACCGCTTCTGGAG...................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
.........................................................TAATAGGGCGG-GCAGTGAACAAGC..........................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	23	20	1.95	39	0	0	0	0	0	0	1	5	3	3	0	0	24	3	0	0	0
......................................................................................TCTGCTTCCCCTTGAGGACTCTGTTGGA..........................................................................................................................................................................................................................................................................	28	18	1.94	35	0	0	0	1	0	0	7	11	6	10	0	0	0	0	0	0	0
.................................................................CGG-GCAGTGAACAAGCTGTGTCTGCT................................................................................................................................................................................................................................................................................................	26	11	1.91	21	0	0	0	0	0	0	2	6	1	8	2	0	2	0	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAA.........................................................................................................................................................................................................................................................................	21	20	1.90	38	0	0	0	0	0	0	0	0	0	0	0	0	5	33	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGC.................................................................................................................................................................................................................................................................................................	20	16	1.81	29	0	0	0	0	0	0	0	0	3	8	0	0	8	10	0	0	0
..........................................................................................CTTCCCCTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	27	20	1.80	36	0	0	0	0	0	0	9	8	10	7	0	0	2	0	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAA.........................................................................................................................................................................................................................................................................	24	20	1.80	36	0	0	0	0	0	0	3	1	3	10	1	0	13	5	0	0	0
....................................................................................................AGGACTCTGTTGGAAGCCA--AGCA...............................................................................................................................................................................................................................................................	23	20	1.75	35	0	0	0	0	0	0	0	0	0	0	0	0	33	2	0	0	0
...............................................................................................CCTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	27	20	1.70	34	0	0	0	0	0	0	0	1	1	3	1	0	26	2	0	0	0
........................................................................................................................................GAGGATGTTGGGTCATGCAGCCG---C.........................................................................................................................................................................................................................	24	18	1.67	30	0	0	0	0	0	0	0	10	0	20	0	0	0	0	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	18	20	1.65	33	0	0	0	0	0	0	2	0	0	0	31	0	0	0	0	0	0
.......................................................................................................ACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	22	20	1.60	32	0	0	0	0	0	0	0	0	0	0	32	0	0	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	28	20	1.55	31	0	0	0	0	0	0	6	13	6	4	0	0	2	0	0	0	0
..................................................................................................................................CGGGGGGAGGATGTTGGGTCAT....................................................................................................................................................................................................................................	22	10	1.50	15	0	0	0	0	0	0	0	0	0	0	0	0	14	1	0	0	0
..........................................................................................................CTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	19	20	1.50	30	0	0	0	0	0	0	0	0	0	0	30	0	0	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCA................................................................................................................................................................................................................................................................................................	21	16	1.50	24	0	0	0	0	0	0	0	0	0	0	0	0	20	4	0	0	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCAA..............................................................................................................................................................................................................................................................	26	20	1.40	28	0	0	0	0	0	0	0	0	0	0	0	0	25	3	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCAA...............................................................................................................................................................................................................................................................................................	22	16	1.31	21	0	0	0	0	0	0	0	0	0	0	0	0	21	0	0	0	0
..............................................................................................CCCTTGAGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	29	20	1.30	26	0	0	0	0	0	0	2	1	1	0	0	0	20	2	0	0	0
.............................................................................CAAGCTGTGTCTGCTTCCCCTTGAGGACTC.................................................................................................................................................................................................................................................................................	30	14	1.29	18	0	0	0	0	0	0	4	9	1	0	0	0	4	0	0	0	0
............................................................................................................................TTCCAACGGGGGGAGGATGTTGG.........................................................................................................................................................................................................................................	23	9	1.22	11	0	0	0	2	0	0	0	1	1	0	7	0	0	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--...................................................................................................................................................................................................................................................................	22	20	1.20	24	0	0	0	0	0	0	2	5	11	5	0	0	0	1	0	0	0
.......................................................................................................ACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	20	20	1.15	23	0	0	0	0	0	0	0	0	1	0	21	0	0	1	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	31	20	1.15	23	0	0	0	0	0	0	0	18	0	0	0	0	0	5	0	0	0
..................................................................................TGTGTCTGCTTCCCCTTGAGGACTCTGT..............................................................................................................................................................................................................................................................................	28	17	1.06	18	0	0	0	0	0	0	1	0	1	10	6	0	0	0	0	0	0
...................................................................................................GAGGACTCTGTTGGAA.........................................................................................................................................................................................................................................................................	16	20	1.05	21	0	0	0	0	0	0	5	2	0	0	14	0	0	0	0	0	0
..................................AGAATTGAGGACCGCTTCTGGAGTAA................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..................................................TCTGGAGTAATAGGGCGG-GCAGTGAACAA............................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................GAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	25	16	1.00	16	0	0	0	0	0	0	0	13	0	3	0	0	0	0	0	0	0
..................................................TCTGGAGTAATAGGGCGG-GCAGTG.................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.....................................ATTGAGGACCGCTTCTGGAGTAATAGGG...........................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................CGAGTTTCAGAATTGAGGACCGC...........................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................CTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	18	20	1.00	20	0	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0
............................................................TAGGGCGG-GCAGTGAACAAGC..........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................GGAGTAATAGGGCGG-GCAGTGAACATT...........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................GGAGTAATAGGGCGG-GCAGTGAAC..............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
GACG--------------GCATCGCTCGAGTTTCAGAATT....................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGA................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................TGAGGACCGCTTCTGGAGTAATA..............................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTAAC...............................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................CGAGTTTCAGAATTGAGGACCGCT..........................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.................................................TTCTGGAGTAATAGGGCGG-.......................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................TCAGAATTGAGGACCGCTTCTGGAGT..................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGAACAAGCC.........................................................................................................................................................................................................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..CG--------------GCATCGCTCGAGTTTCAGAATTGAGGA...............................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................TCTGGAGTAATAGGGCGG-GC.....................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.....................................ATTGAGGACCGCTTCTGGAGTAATA..............................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................GTTTCAGAATTGAGGACCGCTTCTGG.....................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................GCTCGAGTTTCAGAATTGAGGACCGC...........................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................TTCTGGAGTAATAGGGCGG-GT.....................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................CGAGTTTCAGAATTGAGGACCGCTTCT.......................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTCTGGAGT..................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................TCTGGAGTAATAGGGCGG-GCAGTGAA...............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGAT...............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................TGGAGTAATAGGGCGG-GCAGTGAAC..............................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................................GAATTGAGGACCGCTTCTGGAGTAATT..............................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTT........................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.....................................ATTGAGGACCGCTTCTGGAGTAATAG.............................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................GAATTGAGGACCGCTTCTGG.....................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................CTGGAGTAATAGGGCGG-GCAGTGAACAAGC..........................................................................................................................................................................................................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................................AGAATTGAGGACCGCTTCTGGAGTA.................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
......................CGCTCGAGTTTCAGAATTGAGGA...............................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................AATAGGGCGG-GCAGTGAACAAGC..........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................ATCGCTCGAGTTTCAGAATTGAGGA...............................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................GAGGACCGCTTCTGGAGTAATAGGG...........................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................TTCAGAATTGAGGACCGCTTCTGT.....................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................TCAGAATTGAGGACCGCTTCTGGAG...................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.........................................................TAATAGGGCGG-GCAGTGAACAAGCT.........................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAA.........................................................................................................................................................................................................................................................................	18	20	0.95	19	0	0	0	0	0	0	2	12	0	2	3	0	0	0	0	0	0
....................................................................................................AGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	23	20	0.95	19	0	0	0	0	0	0	0	0	4	0	2	0	0	13	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCG...............................................................................................................................................................................................................................................................	24	20	0.95	19	0	0	5	0	0	0	8	5	0	0	1	0	0	0	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTCA..............................................................................................................................................................................................................................................................................................	23	16	0.94	15	0	0	0	0	0	0	0	0	0	0	0	0	14	1	0	0	0
...........................................................................AACAAGCTGTGTCTGCTTCCCCTTGA.......................................................................................................................................................................................................................................................................................	26	15	0.93	14	0	0	0	0	0	0	2	0	8	4	0	0	0	0	0	0	0
.........................................................................TGAACAAGCTGTGTCTGCTTCCC............................................................................................................................................................................................................................................................................................	23	14	0.93	13	0	0	0	0	0	0	0	0	7	4	0	0	2	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCC......................................................................................................................................................................................................................................................................	21	20	0.90	18	2	0	0	0	0	0	0	8	2	2	2	0	1	1	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCTC..............................................................................................................................................................................................................................................................	27	20	0.90	18	0	0	0	0	0	0	1	1	0	0	0	0	16	0	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCC...............................................................................................................................................................................................................................................................	24	20	0.90	18	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	20	20	0.90	18	0	1	0	0	0	0	2	8	2	4	0	0	0	1	0	0	0
.........................................................................................................................AGCTTCCAACGGGGGGAGGATGTTG..........................................................................................................................................................................................................................................	25	9	0.89	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
............................................................................................................................TTCCAACGGGGGGAGGATGTTG..........................................................................................................................................................................................................................................	22	9	0.89	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
..................................................................................TGTGTCTGCTTCCCCTTGAGGACTCT................................................................................................................................................................................................................................................................................	26	17	0.88	15	0	0	0	0	0	0	1	2	4	8	0	0	0	0	0	0	0
..........................................................................................................CTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	17	20	0.85	17	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCTTA.............................................................................................................................................................................................................................................................	26	20	0.80	16	0	0	0	0	0	0	4	0	0	0	8	1	3	0	0	0	0
............................................................................................TCCCCTTGAGGACTCTGTTGGAAGCA......................................................................................................................................................................................................................................................................	26	20	0.80	16	0	0	0	0	0	0	0	0	0	0	0	0	13	3	0	0	0

droSec2

GACG--------------GCGTCGCTCGAGTTGCAGAATTGGGGACCGCGTCTGGAGTAATAAGGCGG-GCAGTGAACAAGCTGTGTCTGCTTCCCCTTGAGGACTCTGTTGGAAGCCA--AGCTTCCAACGGGGGGAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................TGAACAAGCTGTGTCTGCTTCCC............................................................................................................................................................................................................................................................................................	23	20	7.25	145	0	0	137	8
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	27	20	1.90	38	6	0	32	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	25	20	0.85	17	0	1	16	0
..........................................................................GAACAAGCTGTGTCTGCTTCCCC...........................................................................................................................................................................................................................................................................................	23	20	0.65	13	13	0	0	0
....................................................................................................AGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	25	20	0.40	8	1	0	7	0
............................................................TAAGGCGG-GCAGTGAACAAGCTGTGTC....................................................................................................................................................................................................................................................................................................	27	20	0.35	7	0	0	7	0
..........................................................................GAACAAGCTGTGTCTGCTTCCC............................................................................................................................................................................................................................................................................................	22	20	0.35	7	7	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	26	20	0.35	7	7	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	27	20	0.30	6	0	2	4	0
.........................................................................TGAACAAGCTGTGTCTGCTTCCCCT..........................................................................................................................................................................................................................................................................................	25	20	0.30	6	0	0	6	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AGCTT..............................................................................................................................................................................................................................................................	26	20	0.20	4	0	0	0	4
GACG--------------GCGTCGCTCGAGTTGCAGAAT.....................................................................................................................................................................................................................................................................................................................................................	25	20	0.20	4	4	0	0	0
............................................................TAAGGCGG-GCAGTGAACAAGCTG........................................................................................................................................................................................................................................................................................................	23	20	0.15	3	0	1	2	0
.....................................................................................................GGACTCTGTTGGAAGCCA--AGCTTCCAA..........................................................................................................................................................................................................................................................	27	20	0.15	3	3	0	0	0
........................................................................GTGAACAAGCTGTGTCTGCTTCCCC...........................................................................................................................................................................................................................................................................................	25	20	0.15	3	3	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	28	20	0.10	2	0	0	2	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCTTC.............................................................................................................................................................................................................................................................	26	20	0.10	2	0	0	0	2
........................................................................................TGCTTCCCCTTGAGGACTCTGTTGGA..........................................................................................................................................................................................................................................................................	26	20	0.10	2	0	0	2	0
............................................................TAAGGCGG-GCAGTGAACAAGCTGT.......................................................................................................................................................................................................................................................................................................	24	20	0.10	2	0	0	2	0
GACG--------------GCGTCGCTCGAGTTGCAGAATT....................................................................................................................................................................................................................................................................................................................................................	26	20	0.10	2	2	0	0	0
.........................................................................TGAACAAGCTGTGTCTGCTT...............................................................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--AGCC...............................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
....................................................................................................................CCA--AGCTTCCAACGGGGGGAGGATGT............................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.......................................................................AGTGAACAAGCTGTGTCTGCTTCCCCT..........................................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
.............................................................AAGGCGG-GCAGTGAACAAGCTG........................................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAG........................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
...............................................................................AGCTGTGTCTGCTTCCCCTTGAGGACTC.................................................................................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0
.................................................................................................TTGAGGACTCTGTTGGAAGCCA--A..................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0
.............................................................................................................................TCCAACGGGGGGAGGATGTTG..........................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0
............................................................................................................................TTCCAACGGGGGGAGGATGTTGG.........................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
.............................................................................................CCCCTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
..................................................................................................................AGCCA--AGCTTCCAACGGGGGGAGGA...............................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0
..................................................................................................................................CGGGGGGAGGATGTTGGG........................................................................................................................................................................................................................................	18	20	0.05	1	0	0	1	0
..............................................CGCGTCTGGAGTAATAAGGCGG-G......................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
..................................................................................................................AGCCA--AGCTTCCAACGGGGGGAGG................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
......................................................................................................................A--AGCTTCCAACGGGGGGAGGATG.............................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1
...............................................................................................CCTTGAGGACTCTGTTGGAAGCCA--AGC................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
................................................................................................CTTGAGGACTCTGTTGGAAGC.......................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0
..CG--------------GCGTCGCTCGAGTTGCAGAAT.....................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0
...............................................................................................................GGAAGCCA--AGCTTCCAACGGGGGGAA.................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
..................................................TCTGGAGTAATAAGGCGG-GCAG...................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
..............................................CGCGTCTGGAGTAATAAGGCGG-GCA....................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0
..........................................................AATAAGGCGG-GCAGTGAACAAGCTGTG......................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
..................................................................................................TGAGGACTCTGTTGGAAGCCA--AG.................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0
...................................................................................................GAGGACTCTGTTGGAAGCCA--AGCT...............................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0
....................................................TGGAGTAATAAGGCGG-GCAGTGAACA.............................................................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
............................................................TAAGGCGG-GCAGTGAACAAGCT.........................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0
...............................................GCGTCTGGAGTAATAAGGCGG-GC.....................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGGAAGCC......................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
............................................................................................................................TTCCAACGGGGGGAGGATGTTG..........................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0

droYak3

GACG--------------GCGTCGCTCGAGTTGCAGAATTGAGGACCGCATCCGGAGTAGTAAGGCGG-GCAGTGAGCAAGCTGTGTCTGCTTCCCCTTGAGGACTCTGTTGAAAGCCA--AACTTCCAACGGGGGGAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.........................TCGAGTTGCAGAATTGAGGACCG............................................................................................................................................................................................................................................................................................................................................	23	20	0.45	9	0	9	0	0	0	0	0	0	0	0	0
.............................................................................CAAGCTGTGTCTGCTTCCCCTTGAGGAC...................................................................................................................................................................................................................................................................................	28	20	0.45	9	0	0	0	0	0	0	0	0	0	0	9
.........................TCGAGTTGCAGAATTGAGGACCGC...........................................................................................................................................................................................................................................................................................................................................	24	20	0.35	7	0	5	2	0	0	0	0	0	0	0	0
..................................................................................TGTGTCTGCTTCCCCTTGAGGACTC.................................................................................................................................................................................................................................................................................	25	20	0.25	5	0	2	3	0	0	0	0	0	0	0	0
.........................TCGAGTTGCAGAATTGAGGACCGCA..........................................................................................................................................................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
.......................GCTCGAGTTGCAGAATTGAGGACCGC...........................................................................................................................................................................................................................................................................................................................................	26	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
...........................................................................................TTCCCCTTGAGGACTCTGTTGAAAGCC......................................................................................................................................................................................................................................................................	27	16	0.06	1	0	1	0	0	0	0	0	0	0	0	0
.........................TCGAGTTGCAGAATTGAGGAC..............................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.........................TCGAGTTGCAGAATTGAGG................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................CTTCCCCTTGAGGACTCTGTT.............................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................TCTGCTTCCCCTTGAGGACTCTGTTG............................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................GAGGATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................GGGAGGATGTTGGGTCATGCAGCC..............................................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
..............................................................................AAGCTGTGTCTGCTTCCCCTTGAGG.....................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................CAAGCTGTGTCTGCTTCCCCTTGA.......................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................ATGTTGGGTCATGCAGCCG---CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................AAGCTGTGTCTGCTTCCCCTT.........................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...G--------------GCGTCGCTCGAGTTGCAGAATTGAGGA...............................................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
..................GCGTCGCTCGAGTTGCAGAATTGAGGA...............................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................CAAGCTGTGTCTGCTTCCCCTT.........................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................TCGCTCGAGTTGCAGAATTGAGGAC..............................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

AGAG-----------ATAGAGTCGCCAGAGTTTCTGTACTGAGGACAGCAATAGGATTGACGAAGTGG-GCAGTGAAT-AGCTGTGCCTACTACCCCTTAAGGATGCTGTTGAAAGCCG--CGCTTCCAACAGGGGGAGTATGTCGGCTCTCGAAGCCGCCATCAGTTG---C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dp5

GATG--------------GCGTTTCCCGAGTTGCTGTGCTGAAGACGTCATCTGGAATCACCAAGCGC-GCAGTCAACAAGCTGTGCCTGCTGCCCCTTAAAGATGCTGTTGAAAGTCA--GGCTTCCAACGGGGGGAGTATGTCGGGTCAAGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GGC................................................................................................................................................................................................................................................................	24	14	25.50	357	0	121	2	0	0	2	10	80	141	1
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GGCT...............................................................................................................................................................................................................................................................	25	14	11.93	167	1	92	2	0	0	0	24	38	10	0
......................TTCCCGAGTTGCTGTGCTGAAGACG.............................................................................................................................................................................................................................................................................................................................................	25	11	9.91	109	0	36	1	0	0	0	0	15	57	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GG.................................................................................................................................................................................................................................................................	23	14	5.07	71	0	55	0	0	1	0	7	4	4	0
......................TTCCCGAGTTGCTGTGCTGAAGACGT............................................................................................................................................................................................................................................................................................................................................	26	11	2.45	27	0	4	0	0	0	0	0	7	16	0
.................................................................................................TTAAAGATGCTGTTGAAAGTCA--GGC................................................................................................................................................................................................................................................................	25	14	2.43	34	0	10	0	0	0	0	0	2	22	0
..................................................TCTGGAATCACCAAGCGC-GCAGTCAA...............................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	1	0	0	0	0	0	1	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--G..................................................................................................................................................................................................................................................................	22	14	1.93	27	0	9	0	0	0	0	15	0	3	0
......................TTCCCGAGTTGCTGTGCTGAAGAC..............................................................................................................................................................................................................................................................................................................................................	24	11	1.82	20	0	10	0	0	0	0	0	1	9	0
......................TTCCCGAGTTGCTGTGCTGAAGA...............................................................................................................................................................................................................................................................................................................................................	23	11	1.64	18	0	17	0	0	0	0	1	0	0	0
...............................................TCATCTGGAATCACCAAGCGC-GCA....................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................TCTGGAATCACCAAGCGC-GCAGTC.................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................TTCCCGAGTTGCTGTGCTGAAGACGTC...........................................................................................................................................................................................................................................................................................................................................	27	11	0.91	10	0	2	1	0	0	0	0	1	6	0
.......................TCCCGAGTTGCTGTGCTGAAGACGT............................................................................................................................................................................................................................................................................................................................................	25	11	0.91	10	0	2	0	0	0	0	0	2	6	0
.......................TCCCGAGTTGCTGTGCTGAAGACG.............................................................................................................................................................................................................................................................................................................................................	24	11	0.73	8	0	5	0	0	0	0	0	2	1	0
......................TTCCCGAGTTGCTGTGCTGAAG................................................................................................................................................................................................................................................................................................................................................	22	11	0.73	8	0	7	0	0	0	0	1	0	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GGCTT..............................................................................................................................................................................................................................................................	26	14	0.64	9	0	5	2	0	0	0	1	0	1	0
.................................................................................................TTAAAGATGCTGTTGAAAGTCA--GGCT...............................................................................................................................................................................................................................................................	26	14	0.57	8	0	3	1	0	0	0	1	1	2	0
...............................TGCTGTGCTGAAGACGTCATCTGGAA...................................................................................................................................................................................................................................................................................................................................	26	16	0.56	9	0	2	0	0	0	0	0	3	4	0
.................................................................................................TTAAAGATGCTGTTGAAAGTCA--G..................................................................................................................................................................................................................................................................	23	14	0.50	7	0	3	0	0	0	0	2	1	1	0
...................................................................................................AAAGATGCTGTTGAAAGTCA--GG.................................................................................................................................................................................................................................................................	22	15	0.47	7	0	7	0	0	0	0	0	0	0	0
......................TTCCCGAGTTGCTGTGCTGAAGACGTCA..........................................................................................................................................................................................................................................................................................................................................	28	10	0.40	4	0	1	0	0	0	0	0	0	3	0
...................................................................................................AAAGATGCTGTTGAAAGTCA--GGC................................................................................................................................................................................................................................................................	23	15	0.40	6	0	6	0	0	0	0	0	0	0	0
........................CCCGAGTTGCTGTGCTGAAGACGT............................................................................................................................................................................................................................................................................................................................................	24	13	0.38	5	0	3	0	0	0	0	0	0	2	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACGGGG.....................................................................................................................................................................................................................................................	23	16	0.38	6	0	6	0	0	0	0	0	0	0	0
.............................................................................................................................TCCAACGGGGGGAGTATGTCGGGT.......................................................................................................................................................................................................................................	24	9	0.33	3	0	2	0	0	0	0	1	0	0	0
...............................................TCATCTGGAATCACCAAGCGC-GC.....................................................................................................................................................................................................................................................................................................................	23	19	0.32	6	0	6	0	0	0	0	0	0	0	0
..................................................TCTGGAATCACCAAGCGC-GC.....................................................................................................................................................................................................................................................................................................................	20	19	0.32	6	0	5	0	0	1	0	0	0	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GGCTTC.............................................................................................................................................................................................................................................................	27	14	0.29	4	0	0	0	0	0	0	0	4	0	0
.................................................................................................TTAAAGATGCTGTTGAAAGTCA--GG.................................................................................................................................................................................................................................................................	24	14	0.29	4	0	2	0	0	0	0	0	0	2	0
.......................TCCCGAGTTGCTGTGCTGAAGACGTC...........................................................................................................................................................................................................................................................................................................................................	26	11	0.27	3	0	1	0	0	0	0	0	1	1	0
...................................................................................................AAAGATGCTGTTGAAAGTCA--GGCT...............................................................................................................................................................................................................................................................	24	15	0.27	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTC......................................................................................................................................................................................................................................................................	20	15	0.27	4	0	1	0	0	0	0	0	0	3	0
........................................................................................................TGCTGTTGAAAGTCA--GGCTTCCAAC.........................................................................................................................................................................................................................................................	25	16	0.25	4	0	4	0	0	0	0	0	0	0	0
..TG--------------GCGTTTCCCGAGTTGCTGTGCTGA..................................................................................................................................................................................................................................................................................................................................................	26	12	0.25	3	0	0	0	0	0	0	0	2	1	0
.............................................................................CAAGCTGTGCCTGCTGCCCCTTAAAGA....................................................................................................................................................................................................................................................................................	27	17	0.24	4	0	0	0	0	0	0	0	4	0	0
.......................................TGAAGACGTCATCTGGAATCACCAAG...........................................................................................................................................................................................................................................................................................................................	26	17	0.24	4	0	1	0	0	0	0	0	0	3	0
..TG--------------GCGTTTCCCGAGTTGCTGTG......................................................................................................................................................................................................................................................................................................................................................	22	13	0.23	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................TGCTGTTGAAAGTCA--GGCTTCCAA..........................................................................................................................................................................................................................................................	24	18	0.22	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................CCAACGGGGGGAGTATGTCGG.........................................................................................................................................................................................................................................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
....................................TGCTGAAGACGTCATCTGGAATCAC...............................................................................................................................................................................................................................................................................................................................	25	19	0.21	4	0	1	0	0	0	0	0	0	3	0
....................................................................................................AAGATGCTGTTGAAAGTCA--GGCT...............................................................................................................................................................................................................................................................	23	15	0.20	3	0	3	0	0	0	0	0	0	0	0
..............................TTGCTGTGCTGAAGACGTCATCTGGAA...................................................................................................................................................................................................................................................................................................................................	27	16	0.19	3	0	0	0	0	0	0	0	3	0	0
...............................TGCTGTGCTGAAGACGTCATCTGG.....................................................................................................................................................................................................................................................................................................................................	24	16	0.19	3	0	1	0	0	0	0	0	1	1	0
.....................TTTCCCGAGTTGCTGTGCTGAAGACG.............................................................................................................................................................................................................................................................................................................................................	26	11	0.18	2	0	1	0	0	0	0	0	0	1	0
.......................TCCCGAGTTGCTGTGCTGAAGA...............................................................................................................................................................................................................................................................................................................................................	22	11	0.18	2	0	2	0	0	0	0	0	0	0	0
.......................................TGAAGACGTCATCTGGAATCACCAAGCG.........................................................................................................................................................................................................................................................................................................................	28	17	0.18	3	0	0	0	0	0	0	0	0	3	0
..TG--------------GCGTTTCCCGAGTTGCTGTGCTGAA.................................................................................................................................................................................................................................................................................................................................................	27	12	0.17	2	0	1	0	0	0	1	0	0	0	0
.......................TCCCGAGTTGCTGTGCTGAAG................................................................................................................................................................................................................................................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
...................CGTTTCCCGAGTTGCTGTGCTGA..................................................................................................................................................................................................................................................................................................................................................	23	13	0.15	2	0	0	0	0	0	0	0	2	0	0
..TG--------------GCGTTTCCCGAGTTGCTGTGC.....................................................................................................................................................................................................................................................................................................................................................	23	13	0.15	2	0	1	0	0	0	0	1	0	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GGT................................................................................................................................................................................................................................................................	24	14	0.14	2	0	1	0	0	0	0	1	0	0	0
...............................................................................................CCTTAAAGATGCTGTTGAAAGTCA--GGC................................................................................................................................................................................................................................................................	27	14	0.14	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--GGCC...............................................................................................................................................................................................................................................................	25	14	0.14	2	0	1	1	0	0	0	0	0	0	0
................................................................................................................AAAGTCA--GGCTTCCAACGGGGGG...................................................................................................................................................................................................................................................	23	15	0.13	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................AAGATGCTGTTGAAAGTCA--GG.................................................................................................................................................................................................................................................................	21	15	0.13	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................TTGAAAGTCA--GGCTTCCAACGGGG.....................................................................................................................................................................................................................................................	24	16	0.13	2	0	0	0	0	0	0	0	2	0	0
...................................................................................................AAAGATGCTGTTGAAAGTCA--...................................................................................................................................................................................................................................................................	20	16	0.13	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................AAAGTCA--GGCTTCCAACGGGGG....................................................................................................................................................................................................................................................	22	16	0.13	2	0	1	0	0	0	0	0	0	1	0
...............................TGCTGTGCTGAAGACGTCATC........................................................................................................................................................................................................................................................................................................................................	21	17	0.12	2	0	1	0	0	0	0	0	1	0	0
........................................................................................TGCTGCCCCTTAAAGATGCTGTTG............................................................................................................................................................................................................................................................................	24	17	0.12	2	0	2	0	0	0	0	0	0	0	0
.......................................TGAAGACGTCATCTGGAATCACCA.............................................................................................................................................................................................................................................................................................................................	24	17	0.12	2	0	0	0	0	0	0	0	0	2	0
...............................TGCTGTGCTGAAGACGTCATCT.......................................................................................................................................................................................................................................................................................................................................	22	17	0.12	2	0	0	0	0	0	0	2	0	0	0
..................................TGTGCTGAAGACGTCATCTGGAATCAC...............................................................................................................................................................................................................................................................................................................................	27	18	0.11	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................TTCCAACGGGGGGAGTATGTCGG.........................................................................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................CCAACGGGGGGAGTATGTCGGGT.......................................................................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..................................TGTGCTGAAGACGTCATCTGGA....................................................................................................................................................................................................................................................................................................................................	22	18	0.11	2	0	0	0	0	0	0	0	2	0	0
..................................................TCTGGAATCACCAAGCGC-G......................................................................................................................................................................................................................................................................................................................	19	19	0.11	2	0	2	0	0	0	0	0	0	0	0
...................................................CTGGAATCACCAAGCGC-GC.....................................................................................................................................................................................................................................................................................................................	19	19	0.11	2	0	2	0	0	0	0	0	0	0	0
...............................................TCATCTGGAATCACCAAGCGC-G......................................................................................................................................................................................................................................................................................................................	22	19	0.11	2	0	2	0	0	0	0	0	0	0	0
.................................................ATCTGGAATCACCAAGCGC-GC.....................................................................................................................................................................................................................................................................................................................	21	19	0.11	2	0	2	0	0	0	0	0	0	0	0
.......................TCCCGAGTTGCTGTGCTGAAGACGTCA..........................................................................................................................................................................................................................................................................................................................................	27	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................TCCAACGGGGGGAGTATGTCG..........................................................................................................................................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.......................TCCCGAGTTGCTGTGCTGAAGAC..............................................................................................................................................................................................................................................................................................................................................	23	11	0.09	1	0	1	0	0	0	0	0	0	0	0
......................TTCCCGAGTTGCTGTGCTGAAGACC.............................................................................................................................................................................................................................................................................................................................................	25	11	0.09	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................CGGGGGGAGTATGTCGGGT.......................................................................................................................................................................................................................................	19	11	0.09	1	0	0	1	0	0	0	0	0	0	0
.....................TTTCCCGAGTTGCTGTGCTGAAGA...............................................................................................................................................................................................................................................................................................................................................	24	11	0.09	1	0	0	0	0	0	0	0	0	1	0
......................TTCCCGAGTTGCTGTGCTGAAGACGG............................................................................................................................................................................................................................................................................................................................................	26	11	0.09	1	0	1	0	0	0	0	0	0	0	0
.......................TCCCGAGTTGCTGTGCTGAAGACGA............................................................................................................................................................................................................................................................................................................................................	25	11	0.09	1	0	1	0	0	0	0	0	0	0	0
......................TTCCCGAGTTGCTGTGCTGAAGACGTT...........................................................................................................................................................................................................................................................................................................................................	27	11	0.09	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................TCA--GGCTTCCAACGGGGGGAGTATG.............................................................................................................................................................................................................................................	25	11	0.09	1	0	1	0	0	0	0	0	0	0	0
........................CCCGAGTTGCTGTGCTGAAGACGTCA..........................................................................................................................................................................................................................................................................................................................................	26	12	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................GGGAGTATGTCGGGTCAAGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	23	12	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................GAGTATGTCGGGTCAAGC..................................................................................................................................................................................................................................	18	12	0.08	1	0	1	0	0	0	0	0	0	0	0
......................TTCCCGAGTTGCTGTGCTGAAGACGTA...........................................................................................................................................................................................................................................................................................................................................	27	12	0.08	1	0	0	0	0	0	0	1	0	0	0
..TG--------------GCGTTTCCCGAGTTGCTGTGCTG...................................................................................................................................................................................................................................................................................................................................................	25	12	0.08	1	0	0	0	1	0	0	0	0	0	0
..........................CGAGTTGCTGTGCTGAAGACGTCATC........................................................................................................................................................................................................................................................................................................................................	26	13	0.08	1	0	0	0	0	0	0	0	1	0	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACGGGGGGAG.................................................................................................................................................................................................................................................	27	13	0.08	1	0	0	0	0	0	0	0	0	1	0
....................................................................................................................TCA--GGCTTCCAACGGGGGGAG.................................................................................................................................................................................................................................................	21	13	0.08	1	0	0	0	0	0	0	1	0	0	0
........................CCCGAGTTGCTGTGCTGAAGACG.............................................................................................................................................................................................................................................................................................................................................	23	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................TTCCCGAGTTGCTGTGCTGAA.................................................................................................................................................................................................................................................................................................................................................	21	13	0.08	1	0	0	0	0	0	0	1	0	0	0
..TG--------------GCGTTTCCCGAGTTGCTG........................................................................................................................................................................................................................................................................................................................................................	20	13	0.08	1	0	1	0	0	0	0	0	0	0	0
........................CCCGAGTTGCTGTGCTGAAGA...............................................................................................................................................................................................................................................................................................................................................	21	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................CA--GGCTTCCAACGGGGGGAGTT...............................................................................................................................................................................................................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.........................CCGAGTTGCTGTGCTGAAGACGTCATC........................................................................................................................................................................................................................................................................................................................................	27	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.........................CCGAGTTGCTGTGCTGAAGACGTC...........................................................................................................................................................................................................................................................................................................................................	24	14	0.07	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................TTAAAGATGCTGTTGAAAGTCA--GGCTT..............................................................................................................................................................................................................................................................	27	14	0.07	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................TGCCCCTTAAAGATGCTGTTGAAAGT.......................................................................................................................................................................................................................................................................	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................CCCTTAAAGATGCTGTTGAAAGTCA--GGC................................................................................................................................................................................................................................................................	28	14	0.07	1	0	0	1	0	0	0	0	0	0	0
..........................CGAGTTGCTGTGCTGAAGACG.............................................................................................................................................................................................................................................................................................................................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CTTAAAGATGCTGTTGAAAGTCA--GGC................................................................................................................................................................................................................................................................	26	14	0.07	1	0	0	0	0	0	0	0	0	1	0
..........................CGAGTTGCTGTGCTGAAGACGT............................................................................................................................................................................................................................................................................................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................TAAAGATGCTGTTGAAAGTCA--...................................................................................................................................................................................................................................................................	21	15	0.07	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACGGGGGGA..................................................................................................................................................................................................................................................	26	15	0.07	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................TTAAAGATGCTGTTGAAAGTC......................................................................................................................................................................................................................................................................	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................AAGATGCTGTTGAAAGTCA--GGCTT..............................................................................................................................................................................................................................................................	24	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..........................CGAGTTGCTGTGCTGAAGA...............................................................................................................................................................................................................................................................................................................................................	19	15	0.07	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................GATGCTGTTGAAAGTCA--GGCTTCCA...........................................................................................................................................................................................................................................................	25	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................AGTCA--GGCTTCCAACGGGGGG...................................................................................................................................................................................................................................................	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................GTCA--GGCTTCCAACGGGGGG...................................................................................................................................................................................................................................................	20	15	0.07	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................AAAGATGCTGTTGAAAGTCA--G..................................................................................................................................................................................................................................................................	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................TCA--GGCTTCCAACGGGGGGA..................................................................................................................................................................................................................................................	20	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACGT.......................................................................................................................................................................................................................................................	21	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACGG.......................................................................................................................................................................................................................................................	21	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACG........................................................................................................................................................................................................................................................	20	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................CCCCTTAAAGATGCTGTTGAAAG........................................................................................................................................................................................................................................................................	23	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................TGAAAGTCA--GGCTTCCAACGGGGG....................................................................................................................................................................................................................................................	24	16	0.06	1	0	0	0	0	0	0	0	1	0	0
................................................................................................................AAAGTCA--GGCTTCCAACGGG......................................................................................................................................................................................................................................................	20	16	0.06	1	0	0	0	0	0	0	1	0	0	0
......................................................................................................GATGCTGTTGAAAGTCA--GGCTT..............................................................................................................................................................................................................................................................	22	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.............................GTTGCTGTGCTGAAGACGTCATCTGGA....................................................................................................................................................................................................................................................................................................................................	27	16	0.06	1	0	1	0	0	0	0	0	0	0	0
...............................TGCTGTGCTGAAGACGTCATCTGGAAA..................................................................................................................................................................................................................................................................................................................................	27	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................CGAGTTGCTGTGCTGAAG................................................................................................................................................................................................................................................................................................................................................	18	16	0.06	1	0	0	0	0	0	0	0	1	0	0
...............................TGCTGTGCTGAAGACGTCATCTGGA....................................................................................................................................................................................................................................................................................................................................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0
...................................................................................GTGCCTGCTGCCCCTTAAAGATGC.................................................................................................................................................................................................................................................................................	24	17	0.06	1	0	1	0	0	0	0	0	0	0	0
...............................TGCTGTGCTGAAGACGTCATCTG......................................................................................................................................................................................................................................................................................................................................	23	17	0.06	1	0	0	0	0	0	0	1	0	0	0
.............................................................................CAAGCTGTGCCTGCTGCCCCTT.........................................................................................................................................................................................................................................................................................	22	17	0.06	1	0	1	0	0	0	0	0	0	0	0
.......................................TGAAGACGTCATCTGGAATCACCAA............................................................................................................................................................................................................................................................................................................................	25	17	0.06	1	0	0	0	0	0	0	0	1	0	0
................................................................................GCTGTGCCTGCTGCCCCTTAAAGATGC.................................................................................................................................................................................................................................................................................	27	17	0.06	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TCAACAAGCTGTGCCTGCTG...............................................................................................................................................................................................................................................................................................	20	17	0.06	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................TGTTGAAAGTCA--GGCTTCCAA..........................................................................................................................................................................................................................................................	21	18	0.06	1	0	0	0	0	0	0	0	0	1	0
.................................CTGTGCTGAAGACGTCATCTGGAA...................................................................................................................................................................................................................................................................................................................................	24	18	0.06	1	0	0	0	0	0	0	0	1	0	0
...................................GTGCTGAAGACGTCATCTGGAATC.................................................................................................................................................................................................................................................................................................................................	24	18	0.06	1	0	1	0	0	0	0	0	0	0	0
..................................TGTGCTGAAGACGTCATCTGGAA...................................................................................................................................................................................................................................................................................................................................	23	18	0.06	1	0	0	0	0	0	0	1	0	0	0
..........................CGAGTTGCTGTGCTGAAC................................................................................................................................................................................................................................................................................................................................................	18	18	0.06	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................TGCTGTTGAAAGTCA--GGCTTCCA...........................................................................................................................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.............................................CGTCATCTGGAATCACCAAGCGC-GC.....................................................................................................................................................................................................................................................................................................................	25	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................GCTGTTGAAAGTCA--GGCTTCCA...........................................................................................................................................................................................................................................................	22	18	0.06	1	0	1	0	0	0	0	0	0	0	0
..............................TTGCTGTGCTGAAGACGTC...........................................................................................................................................................................................................................................................................................................................................	19	18	0.06	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................TGCTGTTGAAAGTCA--GGCTT..............................................................................................................................................................................................................................................................	20	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................TCTGGAATCACCAAGCGC-GA.....................................................................................................................................................................................................................................................................................................................	20	19	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................CTGAAGACGTCATCTGGAAT..................................................................................................................................................................................................................................................................................................................................	20	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................TCTGGAATCACCAAGCGC-.......................................................................................................................................................................................................................................................................................................................	18	19	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................TGCTGAAGACGTCATCTGG.....................................................................................................................................................................................................................................................................................................................................	19	19	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................CATCTGGAATCACCAAGCGC-G......................................................................................................................................................................................................................................................................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................TGTGCTGAAGACGTCATCTG......................................................................................................................................................................................................................................................................................................................................	20	19	0.05	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................ATGCTGTTGAAAGTCA--GGCTT..............................................................................................................................................................................................................................................................	21	19	0.05	1	0	0	0	0	0	0	0	0	1	0
.......................................TGAAGACGTCATCTGGAATCA................................................................................................................................................................................................................................................................................................................................	21	19	0.05	1	0	0	0	0	0	0	0	1	0	0
...............................................TCATCTGGAATCACCAAGCGC-.......................................................................................................................................................................................................................................................................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................GTCATCTGGAATCACCAAGCGC-GC.....................................................................................................................................................................................................................................................................................................................	24	19	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

GATG--------------GCGTTGCCCGAGTTGCTGTGCTGAGGACGTCATCTGGAATCACCAAGCGC-GCCGTCAACAAGCTGTGCCTGCTGCCCCTTAAAGATGCTGTTGAAAGTCA--GGCTTCCAACGGGGGGAGTATGTCGGGTCAAGCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................TTGCTGTGCTGAGGACGTCAT.........................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0
..........................................................CACCAAGCGC-GCCGTCAA...............................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	1	0	0
.............................................................................................................................TCCAACGGGGGGAGTATGTC...........................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1	0
........................................................................GTCAACAAGCTGTGCCTGCTGCCC............................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.........................................................TCACCAAGCGC-GCCGTCAACAAG...........................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0

droWil2

TTTC--------------TTTTATTTTTAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTT-GTAT----CGCCCG----CTCGCTTGCG----TGCG-----CCTTG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

droVir3

G-----------------------------------------------------GAATCATAAAGTGA-GCAACTAATAAGCAGTGACTGCTTCCTCTTAATGATCCTGTTCAAGCTCA--ATCCTTCAACGGGGGGAGTATGTTCGGCTAAGCAGCTA---AAAATTA---A-----------------------------------AT-AAGTACTA-TGTTGGCATAACATTTCAGTTACATATT------GAATTGC------------------------GTGACAA--GG-AATGTCACCATTTCTTTTTTGTTTGGG---------------------------------------------------TTTCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................................................................................................................................................................................................................TTTCAGTTACATATT------GAATTGC------------------------GTGA...........................................................................................	26	1	44.00	44	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	6	8	1	0	0	0	7	1	0	12	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTTCAGTTACATATT------GAATTGC------------------------GTG............................................................................................	25	1	7.00	7	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................AAGTACTA-TGTTGGCATAACATTTCAGT............................................................................................................................................	28	1	3.00	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................TAATGATCCTGTTCAAGCTCA--ATCCT..............................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TTCAAGCTCA--ATCCTTCAACGGGGG....................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................AGTACTA-TGTTGGCATAACATTTCAGT............................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTTCAGTTACATATT------GAATTGC------------------------GT.............................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................AAGTACTA-TGTTGGCATAACATTTCAG.............................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTTCAGTTACATATT------GAATTGC------------------------GTGAA..........................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TACATATT------GAATTGC------------------------GTGACAA--GG-AA.................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTTCAGTTACATATT------GAATTGC------------------------GTGACA.........................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................AAGCAGCTA---AAAATTA---A-----------------------------------AT-AAGTAC...................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TAAGCAGCTA---AAAATTA---A-----------------------------------AT-AAGTACT..................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GGCG--------------AA---------------------------------------ATTAGAAGA-GCTACAAATAAGCTGTGCTTGCTGCCCCTTAAGGATTCTGTTGAAGACTA--AGTCTTCAACGGGGGGAGGATGTTGGGCTCAGCAATCA---TCGCTTCA-----------------TTGTAATT----------------AAGAGCGGCAGTTCATAGAATATGTTATCATTTAAGAGAATTTGTA----A-------------C-------------------G-GAGATCACGCTCTCTCTTTTGCGT-TGTCTCTT----TCACCCACCGCC----GGCTCGCGTACA-------------T---T	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
........................................................................................................................................................................CA-----------------TTGTAATT----------------AAGAGCGGCAGTTCATC........................................................................................................................................................	27	20	0.45	9	0	0	0	0	0	9
........................................................................................................................................................................CA-----------------TTGTAATT----------------AAGAGCGGCAG..............................................................................................................................................................	21	20	0.25	5	5	0	0	0	0	0
............................................................TTAGAAGA-GCTACAAATAAGCTGTGC.....................................................................................................................................................................................................................................................................................................	26	15	0.13	2	0	0	0	0	0	2
.......................................................................................................................................................................TCA-----------------TTGTAATT----------------AAGAGCGGCAGTTCA..........................................................................................................................................................	26	20	0.10	2	0	0	0	0	0	2
..............................................................AGAAGA-GCTACAAATAAGCTGTGCTTC..................................................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................TA--AGTCTTCAACGGGGGGAGGAT..............................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0	0
...............................................................................................................................CAACGGGGGGAGGATGTT...........................................................................................................................................................................................................................................	18	20	0.05	1	1	0	0	0	0	0
......................................................................CTACAAATAAGCTGTGCTT...................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	1	0	0
......................................................................................................................................................................TTCA-----------------TTGTAATT----------------AAGAGCGGCAGT.............................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
...............................................................GAAGA-GCTACAAATAAGCTGTGCTT...................................................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................................TGTAATT----------------AAGAGCGGCAGTTCAT.........................................................................................................................................................	23	20	0.05	1	0	0	0	1	0	0
.........................................................................................................................................................................A-----------------TTGTAATT----------------AAGAGCGGCAGTTCATC........................................................................................................................................................	26	20	0.05	1	0	0	0	0	1	0
...........................................................................................................................TCTTCAACGGGGGGAGGATGTTGG.........................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
.................................................................................................TTAAGGATTCTGTTGAAGACT......................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................TTTGTA----A-------------C-------------------G-GAGATCACGCTCTC.....................................................................	23	20	0.05	1	0	0	0	0	1	0
.....................................................................................................................TA--AGTCTTCAACGGGGGGAGGATGTTG..........................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................TTCAACGGGGGGAGGATGTT...........................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................AGAATATGTTATCATTTAAGAGAATA...............................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................CA-----------------TTGTAATT----------------AAGAGCGGCAGTTCAAT........................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	1
..............................................................................................................................TCAACGGGGGGAGGATGTTGGGC.......................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................A-----------------TTGTAATT----------------AAGAGCGGCAGT.............................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................CA-----------------TTGTAATT----------------AAGAGCGGCAGTTCACC........................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	1

dan_995

scaffold_12947:920197-920347 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-28.4	-28.4	-27.5