ID:

dan_991

 Coordinate:

scaffold_12947:518163-518313 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.7 -4.3 -4.3

Flybase annnotation

CDS [Dana\GF19013-cds]; exon [dana_GLEANR_20584:18]; intron [Dana\GF19013-in]

No Repeatable elements found

mature
  1. scaffold_418:962-986 -
  2. scaffold_5806:50-74 -
  3. scaffold_9113:221-245 -
  4. scaffold_12671:84871-84895 -
  5. scaffold_12902:353860-353884 -
  6. scaffold_12911:1833946-1833970 -
  7. scaffold_12922:4938-4962 -
  8. dan_991  scaffold_12947:518258-518282 -
  9. scaffold_12947:544244-544268 -
  10. scaffold_12982:11015-11039 -
  11. scaffold_13034:1732589-1732613 -
  12. scaffold_13072:3271-3295 -
  13. scaffold_13082:2506024-2506048 -
  14. scaffold_13099:3054664-3054688 -
  15. scaffold_13099:3239429-3239453 -
  16. scaffold_13238:52728-52752 -
  17. scaffold_13258:348934-348958 -
  18. scaffold_13260:1797450-1797474 -
  19. scaffold_13337:8472102-8472126 -
  20. scaffold_13767:1205478-1205502 -
  21. scaffold_12586:483530-483554 -
  22. scaffold_12916:14386626-14386650 -
  23. scaffold_12948:564816-564840 -
  24. scaffold_13045:699250-699274 -
  25. scaffold_13045:1301519-1301543 -
  26. scaffold_13230:2137421-2137445 -
  27. scaffold_13337:22575326-22575350 -
  28. scaffold_13339:2102806-2102830 -
  29. scaffold_13417:2841816-2841840 -
  30. scaffold_13499:235742-235766 -
  31. scaffold_256:146-170 +
  32. scaffold_6842:409-433 +
  33. scaffold_7368:8599-8623 +
  34. scaffold_7386:5483-5507 +
  35. scaffold_8297:6206-6230 +
  36. scaffold_8612:75-99 +
  37. scaffold_9018:783-807 +
  38. scaffold_9057:7746-7770 +
  39. scaffold_10576:288-312 +
  40. scaffold_12276:41577-41601 +
  41. scaffold_12586:417039-417063 +
  42. scaffold_12902:123026-123050 +
  43. scaffold_12902:126526-126550 +
  44. scaffold_12902:130048-130072 +
  45. scaffold_13034:44646-44670 +
  46. scaffold_13057:48773-48797 +
  47. scaffold_13230:2072495-2072519 +
  48. scaffold_13258:493008-493032 +
  49. scaffold_13272:419099-419123 +
  50. scaffold_13339:4373851-4373875 +
star
  1. scaffold_3785:676-704 +
  2. scaffold_8612:105-133 +
  3. scaffold_12276:41607-41635 +
  4. scaffold_12620:4579-4607 -
  5. dan_991  scaffold_12947:518224-518252 -
  6. scaffold_13034:810265-810293 +
  7. scaffold_13043:53308-53336 +
  8. scaffold_13045:1226743-1226771 +
  9. scaffold_13082:740221-740249 -
  10. scaffold_13082:3705118-3705146 -
  11. scaffold_13089:458781-458809 +
  12. scaffold_13099:2658284-2658312 +
  13. scaffold_13157:19358-19386 +
  14. scaffold_13230:2072525-2072553 +
  15. scaffold_13230:3265637-3265665 +
  16. scaffold_13248:4838677-4838705 -
  17. scaffold_13339:616094-616122 -
  18. scaffold_13339:1675283-1675311 +
  19. scaffold_13339:1683785-1683813 -
  20. scaffold_13339:2105878-2105906 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGTACTTCGACTGAGCGTGAGCAAAATTTGTATACGAGCAACTCAATCGGTTGCTTTCAGACTTTTTGCTCAAAGTCTCAATGACAAACACTTATTTTGAGACCGCACGAATCGGTTAACAGTTATTTGCAAGCTATGCTTTTTACGGAAACTATCGTGTGTTGTATTTATGTATTTATTTTAATTATTTCTATATTGCAGTAGATCCTGAAAACGCAGAAGAAAGTGTTGGGGAAATTTCCGTGCAAATT
*********************************************************************************.......((..((..(((.(((((.......)))))..))).))..))...........*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V106
head
 V105
male body
..........................................................................................................................................................................................................AGAACCTGAAAACCCAGAAGA............................ 21 2 1 1.00 1 1 0 0 0 0
........................................ACTCAATCGGTTGCTTTCAGACTTTT......................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
...........................TGGTATACGAGCAACTCAATCGGT........................................................................................................................................................................................................ 24 1 20 0.30 6 6 0 0 0 0
..................................................................................................................................................................................................................................TGGTGGGGAAATGTCCGTGGA.... 21 3 4 0.25 1 0 0 1 0 0
.................................................................................TGACAAACACTTATTTTGAGACCGC................................................................................................................................................. 25 0 20 0.15 3 0 3 0 0 0
......TCGACTGAGCGTGAGCAAAATTTGT............................................................................................................................................................................................................................ 25 0 9 0.11 1 0 1 0 0 0
..................................................................................GACAAACACTTATTTTGAGACCGCAC............................................................................................................................................... 26 0 20 0.10 2 1 1 0 0 0
..................GAGCAAAATTTGTATACGAGCAACT................................................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0
...........TGAGCGTGAGCAAAATTTGTATACGAGC.................................................................................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0
...................................................................................................................TTGACAGTTATTTGCAAGCTATGCTTTT............................................................................................................ 28 1 11 0.09 1 0 1 0 0 0
.............................................................................................................................................TTTACCGACACTAACGTGT........................................................................................... 19 3 12 0.08 1 0 0 0 1 0
.................TGAGCAAAATTTGTATACGAGCAACT................................................................................................................................................................................................................ 26 0 14 0.07 1 1 0 0 0 0
.......................................................................................................................................................................................................AATAGATCCTGAAACCGCAT................................ 20 3 16 0.06 1 0 0 0 0 1
...............................................................................................................TCGGTTAACAGTTATTTGCAAGCTATGCT............................................................................................................... 29 0 20 0.05 1 1 0 0 0 0
.............................GTATACGAGCAACTCAATCGGC........................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0
..............................CATACGAGCAACTCAATCGGT........................................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0
.................................................................................TGACAAACACTTATTTTGAGACCGCAC............................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
.......................................................................................ACACTTATTTTGAGACCGCACGAATCGG........................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
............................................................................................................GAATCGGTTAACCGTTATTTGCAAGC..................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.............................GGATACGAGCAACTCAATCGGC........................................................................................................................................................................................................ 22 2 20 0.05 1 1 0 0 0 0
.....................................................................................AAACACTTATTTTGAGACCGCACGAAT........................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
.............................GTATACGAGCAACTCAATCGGT........................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0
....................................................................................CAAACACTTATTTTGAGACCGCACGAA............................................................................................................................................ 27 0 20 0.05 1 0 0 1 0 0
...............................................................................................................TCGGTTAACAGTTATTTGCAAGCTATG................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
...............................................................................................................TCGGTTAACAGTTATTTGCAAGCTAC.................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ACATGAAGCTGACTCGCACTCGTTTTAAACATATGCTCGTTGAGTTAGCCAACGAAAGTCTGAAAAACGAGTTTCAGAGTTACTGTTTGTGAATAAAACTCTGGCGTGCTTAGCCAATTGTCAATAAACGTTCGATACGAAAAATGCCTTTGATAGCACACAACATAAATACATAAATAAAATTAATAAAGATATAACGTCATCTAGGACTTTTGCGTCTTCTTTCACAACCCCTTTAAAGGCACGTTTAA
***************************************************************************************************************.......((..((..(((.(((((.......)))))..))).))..))...........********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V055
head
....................CGTTTTAAACATATGCTCGTTGAGTTAG........................................................................................................................................................................................................... 28 0 20 0.35 7 0 5 2 0
.......................................................................................................GCGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 22 0 20 0.25 5 5 0 0 0
.......................................................................................................GCGTGCTTAGCCAATTGTCAATA............................................................................................................................. 23 0 20 0.20 4 4 0 0 0
......................................................................................................GGCGTGCTTAGCCAATTGTCAATAA............................................................................................................................ 25 0 20 0.10 2 2 0 0 0
...................................................................................................TCTGGCGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 26 0 20 0.10 2 1 1 0 0
......................................................................................................GGCGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 23 0 20 0.10 2 1 1 0 0
..............................................................................................................................................................CACCACATCAATACAAAAATA........................................................................ 21 3 10 0.10 1 0 1 0 0
..................................................................................................CTCTGGCGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 27 0 20 0.10 2 2 0 0 0
......................................................................................................GGCGTGCTTAGCCAATTGTCAATAAAC.......................................................................................................................... 27 0 20 0.10 2 0 2 0 0
.........................TAAACATATGCTCGTTGAGTTAG........................................................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0
........................................................................................................CGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 21 0 20 0.05 1 1 0 0 0
................................................CCAAAGCAAGTCTGAATAA........................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 1
....................................................................................................CTGACGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 25 1 20 0.05 1 1 0 0 0
..........................................................................................................TGCTTAGCCAATTGTCAATAA............................................................................................................................ 21 0 20 0.05 1 1 0 0 0
.........................................................................................................GTGCTTAGCCAATTGTCAATA............................................................................................................................. 21 0 20 0.05 1 1 0 0 0
..........................AAACATATGCTCGTTGAGTTAGC.......................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0
....................................................................................GTTTGTGAATAAAACTCTGGCGT................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
.........................................................................................................GTGCTTAGCCAATTGTCAATAAA........................................................................................................................... 23 0 20 0.05 1 1 0 0 0
....................................................................................GTTTGTGAATAAAACTCTGGCGTGA.............................................................................................................................................. 25 1 20 0.05 1 1 0 0 0
..........................AAACATATGCTCGTTGAGTTAGCCAA....................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0
..........................AAACATATGCTCGTTGAGTTAGCCA........................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0
.....................................................................................................TGGCGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 24 0 20 0.05 1 1 0 0 0
......................................................................................................GGCGTCCTTAGCCAATTGTCAAT.............................................................................................................................. 23 1 20 0.05 1 0 1 0 0
.........................TAAACATATGCTCGTTGAGTTAGCCAA....................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
...................................................................................................TCTGGCGTGCTTAGCCAATTGTCAATAAA........................................................................................................................... 29 0 20 0.05 1 1 0 0 0
..........................AAACATATGCTCGTTGAGTTAG........................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0
....................................................................................GTTTGTGAATAAAACTCTGGCGTGCTT............................................................................................................................................ 27 0 20 0.05 1 1 0 0 0
....................................................................................................CTGGCGTGCTTAGCCAATTGTCAAT.............................................................................................................................. 25 0 20 0.05 1 0 1 0 0
....................CGTTTTAAACATATGCTCGTTGAGTTA............................................................................................................................................................................................................ 27 0 20 0.05 1 0 1 0 0
....................CGTTTTAAACATATGCTCGTTGAGTT............................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
.............................................................................................................TTAGCCAATTGTCAATAAACGT........................................................................................................................ 22 0 20 0.05 1 0 1 0 0
....................CGTTTTAAACATATGCTCGTTGAGTTTG........................................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0
.....................................................................................................TGGCGTGCTTAGCCAATTGTCAATTGAA.......................................................................................................................... 28 3 20 0.05 1 1 0 0 0
......................................................................................................GGCGTGCTTAGCCAATTGT.................................................................................................................................. 19 0 20 0.05 1 1 0 0 0
....................CGTTTTAAACATATGCTCGTCGAGTTAGC.......................................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0
............................................................................................................................................................CACACAACATAAATAGAACA........................................................................... 20 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12947:518113-518363 - dan_991 TGTACTTCGACTGAGCGTGAGCAAAATT----TGTATACGAGCAACT--CAATCGGTTGCTTTCAGACTTTTTGCTCAAAGTCTCAATGACAAACACTTATTTTGAGACCGCACGAATCGGTTAACAGTTAT-TTGCAAGCTATGCTTTTTAC-GGA-----A----------AC------TATCGTGT----------GTTGTATTTATGTATTTATTTTAATTATT----------TCTATATTGCAGTAGATCCTGAAAACGCAGAAGAAAGTGTTGGGGAAATTTCCGTGCAAAT---T
droBip1 scf7180000392124:18030-18219 - TGCTCGTCATTTGAGCGAGAGCAAAATT----TTCATACGAACAAAG--CAAACAGTTGCTTTTAGACTTTTTGATCAAAGACTCATTGAACAACACTTATTTTGAGACCCCAGCAATCGGTTAACAGTAAT-TTGGGAGTTATATATAA-TT-T------------------------------GCGA----------GTTATA--TTCGGAATCACCTGTAA---------GCATTTTGGTATC-----------------------------------------------------GCAG
droKik1 scf7180000298808:41088-41271 - AGCTTGTCAGCTGATCGCGAGCAAAGTT----TGTATAAAAGCAATT--CAATCGGTGGCTCCTAACATCTTCGCTCTAATGCTAAGAAAATAACAGTTTTATTGCGATCGCACACATCGGTCAACCGTTAT-TTGCGGGCTATGCCCTTAAA-A---------GAGTGGTGCATTTTCAA--------TTTGTTTTTT------------------------TTTTT----------------------------------------------------------------------TTTGT
droFic1 scf7180000448920:4458-4603 + TGTTCTTCGGTTGAGCACGAGCAAAATT----TGTATACGAGCAATT--CAATCGGTTGCTCTCAGACCTTTTGCTCAAAGTCTGAGTGAACAACACTTATTTTGAGACCGCACGAATCGGTTAACAGTTAT-TTGCGAGCTATGGTTATCAC------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000486168:4163-4335 + G--------ATTGAGCGCGAGCAAAATA----TTAACACGAACAATG--CAATTGGTTGCTCTCGGACTTTTTGCTCAAAGTCTGAGTGGAGAAATCTTATTTCGCGACCGCACCAATCGGTGAACAGTTATTTTGTGAGCTAAGCTTATTAC-CAA---AAA-ATCTTAAGC----------------------------AATCTTTATGTAGTT-----------------------------------------------------------------------------------GTCT
droRho1 scf7180000764289:11334-11518 - CGGTTTTGCTCTGAGCGCGAGCAAGCT-----CATTCAAGAACCCAT--AAATCGGTTGCTCTCTGAGTCTTTTCGTAAAGAGTCAGGAAAAGACACTTACTTGCAGACAACAAGAAACGGTCGACAGTTAT-TTGGGAGCTCTGGTTATAAATTTATCAGAA----------AT------TTAGGTGA----------TTGCTATTTATTTAA------------------------------------------------------------------------------------TTATT
droBia1 scf7180000302087:130188-130366 - TGTTCTTCGGCTGAGCGCGAGCCAAATT----TGTATACGAGCAATT--CAATCGGTTACTCTTGGACTTTTTACTCAAAGCCTCAGTGACGAATTCTTATTTTGAGACCGCACGAATCGGTTAACATTTAT-TTGCGAGTTATGTTGAAAAC-TGA-----A----------AC------TGAAAAGA----------TAGGTATTAATGTG-------------------------------------------------------------------------------------TTTGT
droTak1 scf7180000415378:329338-329538 + TGCTCGTCGCCTGAGTGCGAGCAAAATT----TCTGTACGAACAATT--CAATCGGTTGCTCTCTGATTGTTTGCTCAAAGTCTCAGAGAAAAACAGTTATTTGGGGACCGCACGAATCGGTCAACAGTTAT-TTGCGAGCTATGCTATTTTT-AGT------------------TACCAG--------ATCGTTTTAA------------------------ATATTT-TTTG-------C------TATAATCCTAGAAAACAGAAAACAA------------------------------
droEug1 scf7180000408193:195177-195321 + TGTTCTTTGGCTGAGCGCAAGCAAAATT----TGTATAAGAGCAATT--C-ATCAGTTGCTCTCAGACTTTTTGCTCGAAGCCTGCGAGCGAAACAGTTATTTTGCGAGAGCACGAATCGGTTAACAGTTAT-TTGCGAGCTATGCTTTTTAC------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr4:892802-892944 - CGCACT--AGCCGAGTATCGGGTA--TCTGATTGTCTA----------------------------------------------------GGAACTCACATATCTTGTTAATTCTATTTTGTTAA----------------------------------------------------------------CTTATTTTCA------------------------TTACTTATATG-------T------AGTCGATCTAGAAAACTCAGAGGAAAGTGTTGGGGAAATATCCGTGCAAAT---A
droSim2 4:145823-145935 - ----------CTGAGCGAGAGCAACTTT----C------------TT--CACTCGGTTGCTTTCGAAT-TATGGCCCAAAT----AACTAAAAACACTTATTTTGCGACCGCGCGATTTGGCCAACAGTTTT-TTGTGGACTATTCT------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_30:598951-599024 - TTTGTTTTCATTACTTATATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGATCTAGAAAACTCAGAGGAAAGTGTCGGGGAAATATCCGTACAAAT---A
droYak3 v2_chr2h_random_021:48245-48393 + TGGTTTTTGGTTGAGCGCAGACCA--TT----CGTTCAAGAGACACTGGTGAACGGTTCTTGTCTGATTTTCTGCGCAAGTGGTGCGCCAAAAACAGTTATTTGGTGACTGCAAGAAACAGTCAACTGTTAT-TTGCGAGCTCTGGTATTAAT-GGA--------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:1053969-1054053 - T--------------------------------------------------------TGCTGTCGGATTTTATGCTCAAAGTCTTACTCAAGAACACCTATTTTCTTACCGCACGAATCGGTCAACAGTTAT-TTGTAAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_singleton_2521:2218-2405 - TGCTCATCGTCTGAGCGTGAGCAACACT----TTTATACGGACAATT--CAATCGGGTGCTCTCGGACTTTTTTCTCAAAGTATGAGTGAAGAGCACTTCTTTTGCAACCGCACGAATCGGTAAACAGTTAT-CTGCGAGCTATGCTATAAAC-TGACTTGAAGTCTGGATGTGTCTTCAC--------TTCG------------------------------------------------CT------ATAT---------------------------------------------CTGTA
droPer2 scaffold_62:180444-180623 - TGCACGTCGTCTAAGCGCAAGCCAAATT----TGTATACGAAGAATT--CAATCACTTGCTGTCAGACGTTTTTCTCAAAGCGTGAG---------CTTATTTCGCGACCGCACGAATCTGTCAACAGTTAC-ATATTTGCACTAACCATATA----------------------------------------------------------------------------------------C------TGTATGGTTAGTGA-------------TATTTGCGAGTTATGTGTATACATACAT
droWil2 scf2_1100000004904:44494-44665 - TGCTCTTCGACTGAGCGCGAGCAAAATT----TATTTACGAACAATC--CAATCGGTTGCTTTCAGACCTTTTGCTCAAAGTCTCAGTGAAGAACACTTAATTCGCGACAGTGTGAAACAGTTAACAGTAAT-TTGCGAGCTATGATTTAAAG-A---------GTATTGAGTACT-----------------------------TTCATGTG-------------------------------------------------------------------------------------TTCAT
droVir3 scaffold_13052:1671503-1671583 - TATATTA------AATGCA----ATTTT----------------------------------------------TTTACATCATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGACCCTGAAAACGCCGAAGAGAGCGTTGGTGAAATCTCAGTGCAAAT---A
droMoj3 scaffold_6541:1839363-1839565 + TGT-CTCCCTCAGAGCGCGAGCGAGCTA----AGC-CAGACGCGACA--AAAACAGTTTATGTATGAGTTTTT-TTGACTGTGTCAGTGAA-GACACTTATTTGCAGACAACGAAAAAGTGTTAACAGTTAA-TTGCGAGCTATGCTATAAAG-GCA-----A----------ATTTTCGT--------TTCGTC----GTTAAA--TAGGAAATTACGCCACTTTTT----------TTGACATT----CAG---------------------------------------------ATCCT
droGri2 scaffold_14822:751794-751858 + ATCTTTGTTCTA-----------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGATCCTGAGAATGCTGAGGAAAGTGTGGGCGAGATTTCAGTGCAAAT---C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGTACTTCGACTGAGCGTGAGCAAAATT----TGTATACGAGCAACT--CAATCGGTTGCTTTCAGACTTTTTGCTCAAAGTCTCAATGACAAACACTTATTTTGAGACCGCACGAATCGGTTAACAGTTAT-TTGCAAGCTATGCTTTTTAC-GGA-----A----------AC------TATCGTGT----------GTTGTATTTATGTATTTATTTTAATTATT----------TCTATATTGCAGTAGATCCTGAAAACGCAGAAGAAAGTGTTGGGGAAATTTCCGTGCAAAT---TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................ACT--CAATCGGTTGCTTTCAGACTTTT.......................................................................................................................................................................................................................................2620.501100000
.......................................................................................TGACAAACACTTATTTTGAGACCGC...............................................................................................................................................................................................25200.153300000
......TCGACTGAGCGTGAGCAAAATT----TGT............................................................................................................................................................................................................................................................................2590.111100000
........................................................................................GACAAACACTTATTTTGAGACCGCAC.............................................................................................................................................................................................26200.102110000
..................GAGCAAAATT----TGTATACGAGCAACT--..............................................................................................................................................................................................................................................................25200.102020000
...........TGAGCGTGAGCAAAATT----TGTATACGAGC....................................................................................................................................................................................................................................................................28100.101010000
.................TGAGCAAAATT----TGTATACGAGCAACT--..............................................................................................................................................................................................................................................................26140.071010000
.....................................................................................................................TCGGTTAACAGTTAT-TTGCAAGCTATGCT............................................................................................................................................................29200.051010000
.................................GTATACGAGCAACT--CAATCGGC......................................................................................................................................................................................................................................................22200.051010000
.......................................................................................TGACAAACACTTATTTTGAGACCGCAC.............................................................................................................................................................................................27200.051100000
.............................................................................................ACACTTATTTTGAGACCGCACGAATCGG......................................................................................................................................................................................28200.051010000
...........................................................................................AAACACTTATTTTGAGACCGCACGAAT.........................................................................................................................................................................................27200.051100000
.................................GTATACGAGCAACT--CAATCGGT......................................................................................................................................................................................................................................................22200.051010000
..........................................................................................CAAACACTTATTTTGAGACCGCACGAA..........................................................................................................................................................................................27200.051001000
.....................................................................................................................TCGGTTAACAGTTAT-TTGCAAGCTATG..............................................................................................................................................................27200.051100000
.....................................................................................................................TCGGTTAACAGTTAT-TTGCAAGCTAC...............................................................................................................................................................26200.051010000
droBip1
TGCTCGTCATTTGAGCGAGAGCAAAATT----TTCATACGAACAAAG--CAAACAGTTGCTTTTAGACTTTTTGATCAAAGACTCATTGAACAACACTTATTTTGAGACCCCAGCAATCGGTTAACAGTAAT-TTGGGAGTTATATATAA-TT-T------------------------------GCGA----------GTTATA--TTCGGAATCACCTGTAA---------GCATTTTGGTATC-----------------------------------------------------GCAGSizeHit CountTotal NormTotal
No Reads
droKik1
AGCTTGTCAGCTGATCGCGAGCAAAGTT----TGTATAAAAGCAATT--CAATCGGTGGCTCCTAACATCTTCGCTCTAATGCTAAGAAAATAACAGTTTTATTGCGATCGCACACATCGGTCAACCGTTAT-TTGCGGGCTATGCCCTTAAA-A---------GAGTGGTGCATTTTCAA--------TTTGTTTTTT------------------------TTTTT----------------------------------------------------------------------TTTGTSizeHit CountTotal NormTotal
No Reads
droFic1
TGTTCTTCGGTTGAGCACGAGCAAAATT----TGTATACGAGCAATT--CAATCGGTTGCTCTCAGACCTTTTGCTCAAAGTCTGAGTGAACAACACTTATTTTGAGACCGCACGAATCGGTTAACAGTTAT-TTGCGAGCTATGGTTATCAC------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
G--------ATTGAGCGCGAGCAAAATA----TTAACACGAACAATG--CAATTGGTTGCTCTCGGACTTTTTGCTCAAAGTCTGAGTGGAGAAATCTTATTTCGCGACCGCACCAATCGGTGAACAGTTATTTTGTGAGCTAAGCTTATTAC-CAA---AAA-ATCTTAAGC----------------------------AATCTTTATGTAGTT-----------------------------------------------------------------------------------GTCTSizeHit CountTotal NormTotal
No Reads
droRho1
CGGTTTTGCTCTGAGCGCGAGCAAGCT-----CATTCAAGAACCCAT--AAATCGGTTGCTCTCTGAGTCTTTTCGTAAAGAGTCAGGAAAAGACACTTACTTGCAGACAACAAGAAACGGTCGACAGTTAT-TTGGGAGCTCTGGTTATAAATTTATCAGAA----------AT------TTAGGTGA----------TTGCTATTTATTTAA------------------------------------------------------------------------------------TTATTSizeHit CountTotal NormTotal
No Reads
droBia1
TGTTCTTCGGCTGAGCGCGAGCCAAATT----TGTATACGAGCAATT--CAATCGGTTACTCTTGGACTTTTTACTCAAAGCCTCAGTGACGAATTCTTATTTTGAGACCGCACGAATCGGTTAACATTTAT-TTGCGAGTTATGTTGAAAAC-TGA-----A----------AC------TGAAAAGA----------TAGGTATTAATGTG-------------------------------------------------------------------------------------TTTGTSizeHit CountTotal NormTotal
No Reads
droTak1
TGCTCGTCGCCTGAGTGCGAGCAAAATT----TCTGTACGAACAATT--CAATCGGTTGCTCTCTGATTGTTTGCTCAAAGTCTCAGAGAAAAACAGTTATTTGGGGACCGCACGAATCGGTCAACAGTTAT-TTGCGAGCTATGCTATTTTT-AGT------------------TACCAG--------ATCGTTTTAA------------------------ATATTT-TTTG-------C------TATAATCCTAGAAAACAGAAAACAA------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGTTCTTTGGCTGAGCGCAAGCAAAATT----TGTATAAGAGCAATT--C-ATCAGTTGCTCTCAGACTTTTTGCTCGAAGCCTGCGAGCGAAACAGTTATTTTGCGAGAGCACGAATCGGTTAACAGTTAT-TTGCGAGCTATGCTTTTTAC------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CGCACT--AGCCGAGTATCGGGTA--TCTGATTGTCTA----------------------------------------------------GGAACTCACATATCTTGTTAATTCTATTTTGTTAA----------------------------------------------------------------CTTATTTTCA------------------------TTACTTATATG-------T------AGTCGATCTAGAAAACTCAGAGGAAAGTGTTGGGGAAATATCCGTGCAAAT---ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................TCTAGAAAACTCAGAGGAAAGTGT.........................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000002100000
................................................................................................................................................................................................................................................................TAGAAAACTCAGAGGAAAGTGTT........................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAGAAAACTCAGAGGAAAGTGTTGGGG....................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................AGAGGAAAGTGTTGGGGA...................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GAAAGTGTTGGGGAAATATCCGTGC........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000
........................................................................................................................................................................................................................................................................TCAGAGGAAAGTGTTGGGGAAATA...............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000
..........................................................................................................................................................................................................................................................TCGATCTAGAAAACTCAGAGGAAAGTGT.........................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TCGATCTAGAAAACTCAGAGGAAAGT...........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TCTAGAAAACTCAGAGGAAAGTGTT........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................AAACTCAGAGGAAAGTGTTGGGG....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................TTAATTCTATTTTGTTAA----------------------------------------------------------------..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCAGAGGAAAGTGTTGGGGAA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGTTAA----------------------------------------------------------------CTTATTTTCA------------------------TTACTTATATG-------..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAAGTGTTGGGGAAATATC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGAAAACTCAGAGGAAAGT...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................................................................................................................................AACTCAGAGGAAAGTGTTGGGGAAATA...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGAAAACTCAGAGGAAAGTGTTGGG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCCGAGTATCGGGTA--TCTGATTGTC...........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................ACTCAGAGGAAAGTGTTGGGGAAATA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCAGAGGAAAGTGTTGGGGA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................TAGAAAACTCAGAGGAAAGTGTTGGG.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TATG-------T------AGTCGATCTAGAAAACTCAGAGGA...............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCTGATTGTCTA----------------------------------------------------GGAACTCACATATCT......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AAGTGTTGGGGAAATATCCGTGCA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GTCGATCTAGAAAACTCAGAGGAAAGT...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................ACTCAGAGGAAAGTGTTGG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCAGAGGAAAGTGTTGGGGAAATATCCGT..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CTAGAAAACTCAGAGGAAAGTGTTGGG.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TGGGGAAATATCCGTGCAAAT---.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GATCTAGAAAACTCAGAGGAAAGTGT.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CTCAGAGGAAAGTGTTGGGGAAATA...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................ATCTAGAAAACTCAGAGGAAAGTGTT........................2611.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGTGTTGGGGAAATATCCGTGCA.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................GATTGTCTA----------------------------------------------------GGAACTCACATATCTTGT...................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAGAAAACTCAGAGGAAAGTGT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TCACATATCTTGTTAATTCTATTTTGTT....................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TATCGGGTA--TCTGATTGTCTA----------------------------------------------------GGAAC................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCAGAGGAAAGTGTTGGGGAAATATC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................CGGGTA--TCTGATTGTCTA----------------------------------------------------GGAACTCATC...........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GAGGAAAGTGTTGGGGAAA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAGTATCGGGTA--TCTGAT...............................................................................................................................................................................................................................................................................1860.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100
droSim2
----------CTGAGCGAGAGCAACTTT----C------------TT--CACTCGGTTGCTTTCGAAT-TATGGCCCAAAT----AACTAAAAACACTTATTTTGCGACCGCGCGATTTGGCCAACAGTTTT-TTGTGGACTATTCT------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTTGTTTTCATTACTTATATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCGATCTAGAAAACTCAGAGGAAAGTGTCGGGGAAATATCCGTACAAAT---ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................CTCAGAGGAAAGTGTCGGGGA...................2111.0010010
droYak3
TGGTTTTTGGTTGAGCGCAGACCA--TT----CGTTCAAGAGACACTGGTGAACGGTTCTTGTCTGATTTTCTGCGCAAGTGGTGCGCCAAAAACAGTTATTTGGTGACTGCAAGAAACAGTCAACTGTTAT-TTGCGAGCTCTGGTATTAAT-GGA--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................TCTTGTCTGATTTTCTGCGCAAGTGG............................................................................................................................................................................................................................26132.0032025700000000
.........................................................................................................................TCAACTGTTAT-TTGCGAGCTCTGGTAT..........................................................................................................................................................27113.0013020000000011
.........................................................TCTTGTCTGATTTTCTGCGCAAGTGGT...........................................................................................................................................................................................................................27111.0011001000000010
..............................................................TCTGATTTTCTGCGCAAGTGGTGCGCC......................................................................................................................................................................................................................27110.001001900000000
..................................................................................................TATTTGGTGACTGCAAGAAACAGTC....................................................................................................................................................................................2516.00606000000000
.............................................................................................................TGCAAGAAACAGTCAACTGTTAT-T.........................................................................................................................................................................2416.00606000000000
..................................................................................................TATTTGGTGACTGCAAGAAACAGT.....................................................................................................................................................................................2414.00404000000000
.....TTTGGTTGAGCGCAGACCA--TT----CGTT...........................................................................................................................................................................................................................................................................2514.00402110000000
.........................................................................................................................TCAACTGTTAT-TTGCGAGCTCTGGTA...........................................................................................................................................................2614.00402200000000
..............................................TGGTGAACGGTTCTTGTCTGATTTTC.......................................................................................................................................................................................................................................2614.00402200000000
.........................................................................................................................TCAACTGTTAT-TTGCGAGCTCTGGT............................................................................................................................................................2533.671101100000009
...................................................AACGGTTCTTGTCTGATTTTCTGCGCA.................................................................................................................................................................................................................................2713.00303000000000
......TTGGTTGAGCGCAGACCA--TT----CGTTCAA........................................................................................................................................................................................................................................................................2713.00303000000000
............................................................TGTCTGATTTTCTGCGCAAGTGGTG..........................................................................................................................................................................................................................2513.00302100000000
............................................................TGTCTGATTTTCTGCGCAAGTGG............................................................................................................................................................................................................................2313.00302100000000
.........GTTGAGCGCAGACCA--TT----CGTT...........................................................................................................................................................................................................................................................................2112.00201010000000
...................................................AACGGTTCTTGTCTGATTTTCTGCGC..................................................................................................................................................................................................................................2612.00200200000000
..............................................................TCTGATTTTCTGCGCAAGTGGTGCGC.......................................................................................................................................................................................................................2612.00200200000000
.................................................................................................................AGAAACAGTCAACTGTTAT-TTGCGAGC..................................................................................................................................................................2712.00200200000000
.........................................................TCTTGTCTGATTTTCTGCGCAAGTGGTG..........................................................................................................................................................................................................................2812.00202000000000
.............................................................................................................TGCAAGAAACAGTCAACTGTTAT-TT........................................................................................................................................................................2512.00200200000000
..........................................................CTTGTCTGATTTTCTGCGCAAGTGG............................................................................................................................................................................................................................2512.00202000000000
..................................................................................................TATTTGGTGACTGCAAGAAACAGTCAAC.................................................................................................................................................................................2812.00202000000000
.........................................................................................................................TCAACTGTTAT-TTGCGAGCTCTGG.............................................................................................................................................................2431.33403100000000
..............................................................................AGTGGTGCGCCAAAAACAGTTATTTGG......................................................................................................................................................................................................2711.00101000000000
.................................................................................................................................TAT-TTGCGAGCTCTGGTATTAAT-G....................................................................................................................................................2411.00101000000000
...........................................................TTGTCTGATTTTCTGCGCAAGTGG............................................................................................................................................................................................................................2411.00101000000000
.......................................................GTTCTTGTCTGATTTTCTGCGCA.................................................................................................................................................................................................................................2311.00101000000000
..............................................................................................................................TGTTAT-TTGCGAGCTCTGGTATTAT.......................................................................................................................................................2511.00101000000000
.............................................................................................................TGCAAGAAACAGTCAACTGTTAT-TTGC......................................................................................................................................................................2711.00100100000000
TGGTTTTTGGTTGAGCGCAGACCA--TT----...............................................................................................................................................................................................................................................................................2611.00101000000000
...............................................................................................................CAAGAAACAGTCAACTGTTAT-..........................................................................................................................................................................2111.00101000000000
...................................................................................TGCGCCAAAAACAGTTATTTGGTGACTG................................................................................................................................................................................................2811.00101000000000
...............................................................................................................CAAGAAACAGTCAACTGTTAT-TTGCG.....................................................................................................................................................................2611.00101000000000
.......TGGTTGAGCGCAGACCA--TT----CGTTC..........................................................................................................................................................................................................................................................................2411.00100100000000
...........................................CACTGGTGAACGGTTCTTGTCTGATT..........................................................................................................................................................................................................................................2661.00602400000000
..............................................................TCTGATTTTCTGCGCAAGTGGTGC.........................................................................................................................................................................................................................2411.00101000000000
......TTGGTTGAGCGCAGACCA--TT----CGTTCA.........................................................................................................................................................................................................................................................................2611.00101000000000
......TTGGTTGAGCGCAGACCA--TT----CGTTCATT.......................................................................................................................................................................................................................................................................2811.00101000000000
...................................................................TTTTCTGCGCAAGTGGTGCGCCAAAAAC................................................................................................................................................................................................................2811.00100100000000
...............CGCAGACCA--TT----CGTTCAAGAGACAC.................................................................................................................................................................................................................................................................2511.00100100000000
.........................................................TCTTGTCTGATTTTCTGCGCAAGTG.............................................................................................................................................................................................................................2511.00101000000000
...................................................................TTTTCTGCGCAAGTGGTGCGCC......................................................................................................................................................................................................................2211.00100100000000
.......................................................................................................................AGTCAACTGTTAT-TTGCGAGCTCTGG.............................................................................................................................................................2611.00101000000000
......TTGGTTGAGCGCAGACCA--TT----CGTT...........................................................................................................................................................................................................................................................................2411.00101000000000
.......TGGTTGAGCGCAGACCA--TT----CGTTCAAG.......................................................................................................................................................................................................................................................................2711.00101000000000
..............................................................................AGTGGTGCGCCAAAAACAGTTATTTGGA.....................................................................................................................................................................................................2811.00101000000000
...................................................................................................................AAACAGTCAACTGTTAT-TTGCGAGCT.................................................................................................................................................................2611.00100100000000
...............................................................................................................................GTTAT-TTGCGAGCTCTGGTATTA........................................................................................................................................................2311.00101000000000
......................................................................................GCCAAAAACAGTTATTTGGTGACTGCA..............................................................................................................................................................................................2711.00101000000000
TGGTTTTTGGTTGAGCGCAGACCA--.....................................................................................................................................................................................................................................................................................2411.00101000000000
...........................................................................................................ACTGCAAGAAACAGTCAACTGTTAT-T.........................................................................................................................................................................2611.00100100000000
..................................................................................................TATTTGGTGACTGCAAGAAACAGC.....................................................................................................................................................................................2411.00100100000000
.....................................................CGGTTCTTGTCTGATTTTCTGCGCAA................................................................................................................................................................................................................................2611.00101000000000
..............................................................TCTGATTTTCTGCGCAAGTGGTG..........................................................................................................................................................................................................................2311.00101000000000
...................................................................................TGCGCCAAAAACAGTTATTTGGTGAC..................................................................................................................................................................................................2611.00100100000000
............................................................................................................................ACTGTTAT-TTGCGAGCTCTGGTA...........................................................................................................................................................2311.00101000000000
...........................................................................................................ACTGCAAGAAACAGTCAACTGT..............................................................................................................................................................................2211.00101000000000
.................................................TGAACGGTTCTTGTCTGATTTTCTGCGC..................................................................................................................................................................................................................................2811.00100100000000
..................................................GAACGGTTCTTGTCTGATTTTCTGCGC..................................................................................................................................................................................................................................2711.00100100000000
..................................................GAACGGTTCTTGTCTGATTTTCTGC....................................................................................................................................................................................................................................2511.00100100000000
.....................................................................................CGCCAAAAACAGTTATTTGGTGACTGCA..............................................................................................................................................................................................2811.00101000000000
..............................................................................AGTGGTGCGCCAAAAACAGTTATTT........................................................................................................................................................................................................2511.00101000000000
....................................................................................................................AACAGTCAACTGTTAT-TTGCGAGC..................................................................................................................................................................2411.00100100000000
................GCAGACCA--TT----CGTTCAAGAGA....................................................................................................................................................................................................................................................................2111.00100100000000
........................................................TTCTTGTCTGATTTTCTGCGCAAGTGG............................................................................................................................................................................................................................2711.00101000000000
.........................................................TCTTGTCTGATTTTCTGCGCA.................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................TGCAAGAAACAGTCAACTGTTAT-C.........................................................................................................................................................................2411.00100100000000
......TTGGTTGAGCGCAGACCA--TT----CGTTCAAGA......................................................................................................................................................................................................................................................................2911.00100100000000
.................................................................................................TTATTTGGTGACTGCAAGAAACAGT.....................................................................................................................................................................................2511.00101000000000
................................................................................TGGTGCGCCAAAAACAGTTATTTGGTA....................................................................................................................................................................................................2711.00101000000000
TGGTTTTTGGTTGAGCGCAGACCA--T....................................................................................................................................................................................................................................................................................2511.00101000000000
..................................................................................................TATTTGGTGACTGCAAGAAACAGTCA...................................................................................................................................................................................2611.00101000000000
....................................................ACGGTTCTTGTCTGATTTTCTGCGCA.................................................................................................................................................................................................................................2611.00101000000000
..........................................................................................................................CAACTGTTAT-TTGCGAGCTCTGGTA...........................................................................................................................................................2511.00100100000000
........GGTTGAGCGCAGACCA--TT----CGTTCA.........................................................................................................................................................................................................................................................................2411.00101000000000
.................................................TGAACGGTTCTTGTCTGATTTTCTGC....................................................................................................................................................................................................................................2611.00101000000000
...........................................................................................................................AACTGTTAT-TTGCGAGCTCTGGTATT.........................................................................................................................................................2611.00101000000000
............................................................TGTCTGATTTTCTGCGCAAGTGGTGCGCC......................................................................................................................................................................................................................2911.00101000000000
................................................................................................................AAGAAACAGTCAACTGTTAT-TTGCGAGC..................................................................................................................................................................2811.00101000000000
............................................................TGTCTGATTTTCTGCGCAAGTGGTGC.........................................................................................................................................................................................................................2611.00100100000000
...................................TCAAGAGACACTGGTGAACGGTTCT...................................................................................................................................................................................................................................................25110.82905310000000
...........................................CACTGGTGAACGGTTCTTGTCTGATTT.........................................................................................................................................................................................................................................2760.50301200000000
.........................................................................................................................TCAACTGTTAT-TTGCGAGCTCTG..............................................................................................................................................................2340.50202000000000
..................................TTCAAGAGACACTGGTGAACGGTTC....................................................................................................................................................................................................................................................25110.45504010000000
..................................TTCAAGAGACACTGGTGAACGGTTCT...................................................................................................................................................................................................................................................26110.45503200000000
.........................................GACACTGGTGAACGGTTCTTGTCTGA............................................................................................................................................................................................................................................2690.44400220000000
..........................................ACACTGGTGAACGGTTCTTGTCTGATT..........................................................................................................................................................................................................................................2760.33200200000000
..........................................................................................................................CAACTGTTAT-TTGCGAGCTCTGG.............................................................................................................................................................2330.33101000000000
.........................................GACACTGGTGAACGGTTCTTGTCTG.............................................................................................................................................................................................................................................2590.33303000000000
.........................................................................................................................TCAACTGTTAT-TTGCGAGCTCTGGTC...........................................................................................................................................................2630.33101000000000
............................................................................................................................ACTGTTAT-TTGCGAGCTCTGG.............................................................................................................................................................2130.33101000000000
...........................................CACTGGTGAACGGTTCTTGTCTGAT...........................................................................................................................................................................................................................................2560.33201100000000
........................................................................................................................GTCAACTGTTAT-TTGCGAGCTCTG..............................................................................................................................................................2440.25101000000000
.......................................GAGACACTGGTGAACGGTTCTTGTC...............................................................................................................................................................................................................................................2590.22200200000000
...........................T----CGTTCAAGAGACACTGGTGAACGGT......................................................................................................................................................................................................................................................26100.20201100000000
...................................TCAAGAGACACTGGTGAACGGTTC....................................................................................................................................................................................................................................................24110.18202000000000
..........................TT----CGTTCAAGAGACACTGGTGAACGG.......................................................................................................................................................................................................................................................26110.18200200000000
............................................ACTGGTGAACGGTTCTTGTCTGAT...........................................................................................................................................................................................................................................2460.17100100000000
...........................................................................................AAACAGTTATTTGGTGACT.................................................................................................................................................................................................1960.17100010000000
............................................ACTGGTGAACGGTTCTTGTCTGATT..........................................................................................................................................................................................................................................2560.17100100000000
..........................................................................................AAAACAGTTATTTGGTGACTGCAAGA...........................................................................................................................................................................................2660.17100100000000
...........................................CACTGGTGAACGGTTCTTGTCTGATTTT........................................................................................................................................................................................................................................2860.17101000000000
.........................................GACACTGGTGAACGGTTCTTGTCTGATT..........................................................................................................................................................................................................................................2860.17100100000000
.........................................GACACTGGTGAACGGTTCTTGTCTGAT...........................................................................................................................................................................................................................................2760.17100100000000
.................CAGACCA--TT----CGTTCAAGAGACACTGG..............................................................................................................................................................................................................................................................2670.14100010000000
....................ACCA--TT----CGTTCAAGAGACACTGGTG............................................................................................................................................................................................................................................................2570.14100010000000
...........................................CACTGGTGAACGGTTCTTGTCT..............................................................................................................................................................................................................................................2290.11101000000000
..........................................ACACTGGTGAACGGTTCTTGTCTGAA...........................................................................................................................................................................................................................................2690.11101000000000
..........................................ACACTGGTGAACGGTTCTTGTCTGA............................................................................................................................................................................................................................................2590.11101000000000
............................................ACTGGTGAACGGTTCTTGTCTGA............................................................................................................................................................................................................................................2390.11101000000000
........................................AGACACTGGTGAACGGTTCTTGTCTGA............................................................................................................................................................................................................................................2790.11101000000000
..........................................ACACTGGTGAACGGTTCTTGTCTG.............................................................................................................................................................................................................................................2490.11101000000000
........................................AGACACTGGTGAACGGTTCTTGTCTG.............................................................................................................................................................................................................................................2690.11101000000000
.........................................GACACTGGTGAACGGTTCTTGTCC..............................................................................................................................................................................................................................................24100.10100100000000
......................CA--TT----CGTTCAAGAGACACTGGTGAAC.........................................................................................................................................................................................................................................................26100.10101000000000
...........................................CACTGGTGAACGGTTCTTGTC...............................................................................................................................................................................................................................................21100.10100100000000
.........................................GACACTGGTGAACGGTTCTTGT................................................................................................................................................................................................................................................22100.10101000000000
.........................................GACACTGGTGAACGGTTCTTGTC...............................................................................................................................................................................................................................................23100.10100100000000
...................................TCAAGAGACACTGGTGAACGGTTCTTG.................................................................................................................................................................................................................................................27110.09101000000000
..........................TT----CGTTCAAGAGACACTGGTGTT..........................................................................................................................................................................................................................................................23110.09100100000000
..................................TTCAAGAGACACTGGTGAACGGT......................................................................................................................................................................................................................................................23110.09100100000000
....................................CAAGAGACACTGGTGAACGGTTCT...................................................................................................................................................................................................................................................24110.09100100000000
...................................TCAAGAGACACTGGTGAACGGT......................................................................................................................................................................................................................................................22110.09101000000000
...................................TCAAGAGACACTGGTGAACGGTTCTT..................................................................................................................................................................................................................................................26110.09100100000000
...........................T----CGTTCAAGAGACACTGGTGAACGG.......................................................................................................................................................................................................................................................25110.09101000000000
....................................CAAGAGACACTGGTGAACGGTTCC...................................................................................................................................................................................................................................................24110.09100100000000
.........................................GACACTGGTGAACGGTTCTTG.................................................................................................................................................................................................................................................21120.08101000000000
...................................TCAAGAGACACTGGTGAACG........................................................................................................................................................................................................................................................20130.08101000000000
.........................................GACACTGGTGAACGGTTC....................................................................................................................................................................................................................................................18130.08100100000000
..................................TTCAAGAGACACTGGTGAACG........................................................................................................................................................................................................................................................21130.08101000000000
...................................TCAAGAGACACTGGTGAAT.........................................................................................................................................................................................................................................................19130.08101000000000
....................................CAAGAGACACTGGTGAACGG.......................................................................................................................................................................................................................................................20130.08100100000000
......................................AGAGACACTGGTGAACGG.......................................................................................................................................................................................................................................................18140.07100001000000
droEre2
T--------------------------------------------------------TGCTGTCGGATTTTATGCTCAAAGTCTTACTCAAGAACACCTATTTTCTTACCGCACGAATCGGTCAACAGTTAT-TTGTAAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
TGCTCATCGTCTGAGCGTGAGCAACACT----TTTATACGGACAATT--CAATCGGGTGCTCTCGGACTTTTTTCTCAAAGTATGAGTGAAGAGCACTTCTTTTGCAACCGCACGAATCGGTAAACAGTTAT-CTGCGAGCTATGCTATAAAC-TGACTTGAAGTCTGGATGTGTCTTCAC--------TTCG------------------------------------------------CT------ATAT---------------------------------------------CTGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGCACGTCGTCTAAGCGCAAGCCAAATT----TGTATACGAAGAATT--CAATCACTTGCTGTCAGACGTTTTTCTCAAAGCGTGAG---------CTTATTTCGCGACCGCACGAATCTGTCAACAGTTAC-ATATTTGCACTAACCATATA----------------------------------------------------------------------------------------C------TGTATGGTTAGTGA-------------TATTTGCGAGTTATGTGTATACATACATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................ATATA----------------------------------------------------------------------------------------C------TGTATGGTTAGTGA-------------............................20200.051010000
droWil2
TGCTCTTCGACTGAGCGCGAGCAAAATT----TATTTACGAACAATC--CAATCGGTTGCTTTCAGACCTTTTGCTCAAAGTCTCAGTGAAGAACACTTAATTCGCGACAGTGTGAAACAGTTAACAGTAAT-TTGCGAGCTATGATTTAAAG-A---------GTATTGAGTACT-----------------------------TTCATGTG-------------------------------------------------------------------------------------TTCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................TGCTCAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................26104.50450150300
......................................................................TTTGCTCAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................28102.0020012080
.....................................................................TTTTGCTCAAAGTCTCAGTGAAGAACA...............................................................................................................................................................................................................27100.90902070
.....................................................................TTTTGCTCAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................29100.70707000
........................................................................TGCTCAAAGTCTCAGTGAAGAACACTTA...........................................................................................................................................................................................................2890.67603030
...........................................................................TCAAAGTCTCAGTGAAGAACACTTA...........................................................................................................................................................................................................2590.44400040
................................TATTTACGAACAATC--CAATCGGTTGC...................................................................................................................................................................................................................................................26120.42501040
.....................................................................TTTTGCTCAAAGTCTCAGTGAAGAACAC..............................................................................................................................................................................................................28100.30302010
......................................................................TTTGCTCAAAGTCTCAGTGAAGAACA...............................................................................................................................................................................................................26100.30300030
.....TTCGACTGAGCGCGAGCAAAATT----TATT...........................................................................................................................................................................................................................................................................27120.25303000
......TCGACTGAGCGCGAGCAAAATT----TATT...........................................................................................................................................................................................................................................................................26120.25303000
.......................................................................TTGCTCAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................27100.20202000
.........................................................................GCTCAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................25100.20202000
........................................................................TGCTCAAAGTCTCAGTGAAGAACAC..............................................................................................................................................................................................................25100.20202000
......................AAAATT----TATTTACGAACAATC--CAATCGGT......................................................................................................................................................................................................................................................29120.17202000
.......CGACTGAGCGCGAGCAAAATT----TATT...........................................................................................................................................................................................................................................................................25120.17202000
...........TGAGCGCGAGCAAAATT----TATTTACGAAC....................................................................................................................................................................................................................................................................28120.17201010
....................................TACGAACAATC--CAATCGGTTGCT..................................................................................................................................................................................................................................................23120.17201100
.......................................................................................................................................................................TTGAGTACT-----------------------------TTCATGTG-------------------------------------------------------------------------------------TT...1990.11100100
..........................................................................CTCAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................24100.10101000
............................................................................CAAAGTCTCAGTGAAGAACACT.............................................................................................................................................................................................................22100.10101000
.....................................................................TTTTGCTCAAAGTCTCAGTGAAGAACT...............................................................................................................................................................................................................27100.10101000
.................................................................GACCTTTTGCTCAAAGTCTCAGTGAAG...................................................................................................................................................................................................................27100.10101000
....................................................................CTTTTGCTCAAAGTCTCAGTGAAGAA.................................................................................................................................................................................................................26100.10100010
...TCTTCGACTGAGCGCGAGCAAAATT----TATT...........................................................................................................................................................................................................................................................................29110.09101000
.GCTCTTCGACTGAGCGCGAGCAAAATT----...............................................................................................................................................................................................................................................................................27110.09101000
..................................................................ACCTTTTGCTCAAAGTCTCAGTGA.....................................................................................................................................................................................................................24110.09101000
..............................................................TCAGACCTTTTGCTCAAAGTCTCAGT.......................................................................................................................................................................................................................26110.09100010
..............................................................TCAGACCTTTTGCTCAAAGT.............................................................................................................................................................................................................................20110.09100010
................................TATTTACGAACAATC--CAATCGGT......................................................................................................................................................................................................................................................23120.08101000
....................................TACGAACAATC--CAATCGGTTGC...................................................................................................................................................................................................................................................22120.08100010
.........................ATT----TATTTACGAACAATC--CAATCGGT......................................................................................................................................................................................................................................................26120.08101000
droVir3
TATATTA------AATGCA----ATTTT----------------------------------------------TTTACATCATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGACCCTGAAAACGCCGAAGAGAGCGTTGGTGAAATCTCAGTGCAAAT---ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................CCGAAGAGAGCGTTGGTGA...................1911.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................AGCGTTGGTGAAATCTCAGTGC........2211.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GTTGACCCTGAAAACGCCGAAGAG..............................2411.001010000000000000000000000000000000000000000000000000000000000000
droMoj3
TGT-CTCCCTCAGAGCGCGAGCGAGCTA----AGC-CAGACGCGACA--AAAACAGTTTATGTATGAGTTTTT-TTGACTGTGTCAGTGAA-GACACTTATTTGCAGACAACGAAAAAGTGTTAACAGTTAA-TTGCGAGCTATGCTATAAAG-GCA-----A----------ATTTTCGT--------TTCGTC----GTTAAA--TAGGAAATTACGCCACTTTTT----------TTGACATT----CAG---------------------------------------------ATCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................AAAAGTGTTAACAGTTAA-TTGCGAGC..................................................................................................................................................................2664.832910100180
.....................................................................................................................AGTGTTAACAGTTAA-TTGCGAGCTA................................................................................................................................................................2560.332010001
...................................................................................................................AAAGTGTTAACAGTTAA-TTGCGAGC..................................................................................................................................................................2560.332100010
...........................................................................................................ACAACGAAAAAGTGTTAACAGTTAA-T.........................................................................................................................................................................2660.171100000
....................................................................................................................AAGTGTTAACAGTTAA-TTGCGAGCT.................................................................................................................................................................2560.171000010
.....................................................................................................................AGTGTTAACAGTTAA-TTGCGAGCTAT...............................................................................................................................................................2660.171000010
..................................................................................................................AAAAGTGTTAACAGTTAA-TTGCGAG...................................................................................................................................................................2560.171010000
.....................................................................................................................AGTGTTAACAGTTAA-TTGCGAGCC.................................................................................................................................................................2470.141000010
.....TCCCTCAGAGCGCGAGCGAGCTA----AGC-C..........................................................................................................................................................................................................................................................................27170.122200000
.....TCCCTCAGAGCGCGAGCGAGCTA----AG.............................................................................................................................................................................................................................................................................25180.112200000
.....TCCCTCAGAGCGCGAGCGAGCTA----AGC-CA.........................................................................................................................................................................................................................................................................28170.061100000
.....TCCCTCAGAGCGCGAGCGAG......................................................................................................................................................................................................................................................................................20200.051100000
........................................................................................................CAGACAACGAAAAAGTGTTAACAGT..............................................................................................................................................................................25200.051010000
....................................................................................................TTTGCAGACAACGAAAAAGTG......................................................................................................................................................................................21200.051000010
.........................CTA----AGC-CAGACGCGACA--AAAACAGTTT....................................................................................................................................................................................................................................................27200.051100000
TGT-CTCCCTCAGAGCGCGAG..........................................................................................................................................................................................................................................................................................20200.051100000
......................GAGCTA----AGC-CAGACGCGACA--AAAA..........................................................................................................................................................................................................................................................24200.051100000
................GCGAGCGAGCTA----AGC-CAGACGCG...................................................................................................................................................................................................................................................................23200.051000001
...........................A----AGC-CAGACGCGACA--AAAACA........................................................................................................................................................................................................................................................21200.051100000
..................GAGCGAGCTA----AGC-CAGAC......................................................................................................................................................................................................................................................................18200.051000010
.........TCAGAGCGCGAGCGAGCTA----AGC-C..........................................................................................................................................................................................................................................................................23200.051000010
.........................CTA----AGC-CAGACGCGACA--AAAACAGT......................................................................................................................................................................................................................................................25200.051100000
droGri2
ATCTTTGTTCTA-----------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGATCCTGAGAATGCTGAGGAAAGTGTGGGCGAGATTTCAGTGCAAAT---CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:57 PM