ID:

dan_975

 Coordinate:

scaffold_12943:4900976-4901231 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dana_GLEANR_952:2]; CDS [Dana\GF24827-cds]; exon [dana_GLEANR_952:1]; CDS [Dana\GF24827-cds]; intron [Dana\GF24827-in]

Repeatable elements

NameClassFamilyStrand
(TC)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGGCATCGGAACAATGACACCCTGGAACTTTTTTGTGACGGCGGAAGATGTAAGTCAATGTTAATGAATTGTGGAAATTTTCCAGATAGCCCGCATCTGAAACTGTTCTTTGGACACCATATGGATCTGGGACAAGCGCAAATCTAAGTAACGCTCGGCTTATCAGCATTGTTTTGCTTTTATGAATGCGACGTCGCCGTCGCCTTTGAGACGATAACTCTTTTTAGCTTTTCTTTGTACTTTTTTGCTGACTCAAACCTAACCCTTCCGCTGTCTCTCTCTCTCTCTCTTTCCCTTTCTCACAGTACTGGAAGTACAAATTCCGTAATACCTCGATTAATGCCACCGATCTGGA
**************************************************...................(((((((((.....(((((.......)))))....(((((...)))))((....))....((((((.(((.......((((((.((...(((....)))...)).))))))........((((((....)))))).((((((.............(((((..................)))))))))))...........)))))))))..................)))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M058
embryo
 M044
female body
 V039
embryo
...................................................................................................................................................................................................................AAGATAACCCTTTTTAGCTTTACT......................................................................................................................... 24 3 1 1.00 1 1 0 0 0
.....ATCGGAACAATGACACCCTGGAA........................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0
...........................................................................................................TCATTGGACTACATATGGATCT................................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0
................................................................................................................GGACTACATATGGATCTGGG................................................................................................................................................................................................................................ 20 2 1 1.00 1 1 0 0 0
...........................................................................................................TGATTGGACTCCATATGGATCTGG................................................................................................................................................................................................................................. 24 3 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................GACGTCGCCGTCACTGTTGAG................................................................................................................................................. 21 3 2 0.50 1 0 0 1 0
.........................................................................................................................................ACCAAATCTAAGTAACGC......................................................................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0
...........................................................................................................TCCTTGGACCCCCTATGGAT..................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1
........................................................................................................................................GACCAAATCTAAGGAACGC......................................................................................................................................................................................................... 19 3 18 0.06 1 1 0 0 0
..............ATGACACCCTGGAGCTTCC................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0
...........................................................................................................TCTTTGGGCTCCATATGGT...................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0
.................................................TGGAAGGCAATGTTAAAGAA............................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

ACCCGTAGCCTTGTTACTGTGGGACCTTGAAAAAACACTGCCGCCTTCTACATTCAGTTACAATTACTTAACACCTTTAAAAGGTCTATCGGGCGTAGACTTTGACAAGAAACCTGTGGTATACCTAGACCCTGTTCGCGTTTAGATTCATTGCGAGCCGAATAGTCGTAACAAAACGAAAATACTTACGCTGCAGCGGCAGCGGAAACTCTGCTATTGAGAAAAATCGAAAAGAAACATGAAAAAACGACTGAGTTTGGATTGGGAAGGCGACAGAGAGAGAGAGAGAGAAAGGGAAAGAGTGTCATGACCTTCATGTTTAAGGCATTATGGAGCTAATTACGGTGGCTAGACCT
**************************************************...................(((((((((.....(((((.......)))))....(((((...)))))((....))....((((((.(((.......((((((.((...(((....)))...)).))))))........((((((....)))))).((((((.............(((((..................)))))))))))...........)))))))))..................)))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M058
embryo
 V055
head
 V039
embryo
 M044
female body
 V105
male body
...............ACTGTGGGACCTCGAAAA................................................................................................................................................................................................................................................................................................................................... 18 1 1 2.00 2 2 0 0 0 0 0
...............ACTGTGGGACCTCGAAAAA.................................................................................................................................................................................................................................................................................................................................. 19 1 1 2.00 2 1 1 0 0 0 0
...............ACTGTGGGACCTCGAAATA.................................................................................................................................................................................................................................................................................................................................. 19 2 4 1.25 5 5 0 0 0 0 0
...............ACTGTGGGACCTCGAAACAA................................................................................................................................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0
.............TTACTGTGGGACCTCGAAA.................................................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
................CTGTGGGACCTCGAAAAAAT................................................................................................................................................................................................................................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0
..............CACTGTGGGACCTCGAAA.................................................................................................................................................................................................................................................................................................................................... 18 2 7 0.71 5 0 5 0 0 0 0
................CTGTGGGACCTCGAAAAAC................................................................................................................................................................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0
..............ACCTGTGGGACCTCGAAAAAA................................................................................................................................................................................................................................................................................................................................. 21 3 5 0.40 2 2 0 0 0 0 0
.........................................................................................................................................................................................................................................................................GTAGGCGACAGAGAGGGAGTGA..................................................................... 22 3 3 0.33 1 0 0 1 0 0 0
..............TACTGTGGGACCTCGAAA.................................................................................................................................................................................................................................................................................................................................... 18 1 3 0.33 1 0 0 0 1 0 0
................CTGTGGGACCTCGAAAAATC................................................................................................................................................................................................................................................................................................................................ 20 2 3 0.33 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................TCGGAAGGCGACAGAGTGA........................................................................... 19 2 3 0.33 1 0 0 1 0 0 0
..............AACTGTGGGACCTCGAAA.................................................................................................................................................................................................................................................................................................................................... 18 2 16 0.25 4 3 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................................................TGGCAGTATGGCGCTAATT............... 19 3 4 0.25 1 0 1 0 0 0 0
...............CCTGTGGGACCTCGAAAAA.................................................................................................................................................................................................................................................................................................................................. 19 2 4 0.25 1 0 1 0 0 0 0
.............TAACTGTGGGACCTCGAAA.................................................................................................................................................................................................................................................................................................................................... 19 2 5 0.20 1 0 0 1 0 0 0
................CTGTGGGACCTCGAAAAAAATC.............................................................................................................................................................................................................................................................................................................................. 22 3 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................GGCAGTATGGCGCTAAGTA.............. 19 3 11 0.18 2 0 0 0 0 2 0
....................................................................................................................................................................................................................................................................................AGAGAGAGAGAAAGAAAGGCAAA......................................................... 23 2 8 0.13 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................TAGGCGACAGAGAGCGAGCGA..................................................................... 21 3 10 0.10 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................AGTGGGAAAAATCGAAAAGTA........................................................................................................................ 21 3 11 0.09 1 0 0 0 0 0 1
......................................................................................................................................................................................................................................................................................AGAGAGAGAGAGGAAGGGA........................................................... 19 1 12 0.08 1 1 0 0 0 0 0
............TTAACTGTGGGACCTCGAAA.................................................................................................................................................................................................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................GGGTTTAGATTGGGAATGC..................................................................................... 19 3 16 0.06 1 0 0 0 1 0 0
.........CTTGTTACTGGGCGAGCTT........................................................................................................................................................................................................................................................................................................................................ 19 3 17 0.06 1 0 0 0 0 1 0
..CCCTAGCTTGGTTACTGTG............................................................................................................................................................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 1 0
.................TGTGGGACCTCGAAATACC................................................................................................................................................................................................................................................................................................................................ 19 3 18 0.06 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................AAGAAACATGAAAAAAGTA.......................................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................................................................................GCAGTATGGCGCTAAGTA.............. 18 3 20 0.05 1 0 0 0 0 1 0
..............................................................................................................................................................................................................................................AAGAAAGAATGACTGAGTT................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
.......................................................................................ATGGGGCGTAGACTTG............................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................GAGGGAGAGAGGAAGGGAAT......................................................... 20 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:4900926-4901281 + dan_975 TGGGCATCGGAACAATGACACCCTGGAACTTTTTTGTGACGGCGGAAGATGTAAGTC-A-----------------------------------------------------ATGTTAAT-GAATTGTGGAAATTTTCCAGA---------------------TAGCCCGCATCT-----------GAA-ACTGTTCTTTGGACA--------CC------------ATAT--GGATCTGGGACAAGCGCAAAT-------------------------------CTAAGTAACGCTCGGCTTATCAGCATTGTT-T-----------TGC-----------------------TTTTATGAATGC----------GACGTCGCCGTCGCC--TTTGAGACGATAAC-------TCT--TTTT-AGCTTT-TCTTTGTAC--------TTTTTTGCTGACT------------CAAACCT----AACCC----------------TTCCGCTGTCTCTCTCTC---TCTCTCTTTCCCTTTCTCACAGTACTGGAAGTACAAATTCCGTAATACCTCGATTAATGCCACCGATCTGGA
droBip1 scf7180000395654:135068-135424 - TGGGAATTGGAACAATGACACCCTGGAATTTTTTTGTGACGGCGGAAGATGTAAGTC-A-----------------------------------------------------ATGTTAAT-TAATTGTGGAAATTTTCCAGA---------------------TCGCCCGCATCT-----------GAA-ACTGTTCTTTGAACA--------------------ACACAT--GGATCTGGAACAAGCGCAAAT-------------------------------CTAAGTAACGCT-GGCTTATCAGCATTGTT-T-----------TGC-----------------------TTTTATGAATGCTGCTGCCGTCGTCGTCGCCGTCGCC--TTTACGACGATAAC-------TCT--TTTT-AGCTTT-TCTTTGTAC--------TTTTTTGCTGACT------------CAAGCCT----AACCC----------------TTCCGCCGTC-----------TCTCTCTTTCCCTTTCTCACAGTACTGGAAGTACAAATTCCGTAATACCTCGATCAATGCCACAGATTTGGA
droKik1 scf7180000302270:810607-810966 + TGGGCATAGGCACCATGACGCCCTGGAATTTCTTTGTGACGGCAGAAGATGTGAGTTAA-AGCCTGCTGGGGGTTCGGGAATGGAAATGGGAATCGGAATTAATTTCCATGAAT-------GA---GTGGAAATTT-------------------------TCCAGCCCGCATC------------------TGAACTTCGCACA--------TC---------------TCGGGAAGTGGGCCAAGCGTAACT-------------------------------CTAAGGCG--CT--GCTTATCAGTTTTGGCATTGTTTTTGTTT--T-----------------------TTTTACGACTCA-------------------------A-AC---GACGATAAC-------TCT----TT-GGATTT-TCTTTGTGT--T--TTGTTTTTTGCTGACT------------CAAGCTT----AACCC-------------------------------------TTCCT--CTCTTGCTCTTCCAGTACTGGAAATACAAGTTCCGCAATACCTCGATCAATGGCACGGATCCAGA
droFic1 scf7180000453904:630274-630622 - TCGGAATCGGCACCATGACACCGTGGAACTTCTTTGTGACCGCCGAAGACGTAAGTTTA-----------------------------------------------------AT-------GA---ATGGAAATTTTCCACA-------------------CCACACCCGCATCCTCCTAGTCAAGTGA-CATGAACTTCGGACGTACACATATGTGGATTCCAAACAAGGGAGCAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCA--GCTTATCAGCTTTGCTATTGTT---------T-----------------------TTTTACGACTTA-------------------------C-GCTGAGACGATAAC-------TCT--TTTC-GAATTT-TCTTTG-----------TTTT-CGCTGATT------------CAGGCTTT---AACCA----------------T-------------------CTTTCT--GTCTCCCTCTCTCAGTACTGGAAGTATAAGTTTCGCAATACCTCTCTCAACTACACGGATCTGGA
droEle1 scf7180000490454:3744-4090 + TAGGCATTGGCACCATGACCCCCTGGAACTTCTTTGTCACCGCTGAAGATGTGAGTATTT-----------------------------------------A----------A-------------CTCAAAATAA----------------TAATTGTTCTTTTACCCGCATCATA---GTCGATTAA-ACTGAACTTCGGACA--------TCTAAAATTCAAACAACTGAGCAACTGGGCCAATCGTAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTCATTGTG---------T-----------------------TCTTACGACCTA-------------------------C-GCTGAGACGATAAC-------TCTTT--TT-AAATTTTCCTTTGTTT--TCCTTGTTTTCCACTGACT------------CAAGCTTT---AAACT---------------------------------------TCT--CTGTCTCTACTTCAGTACTGGAAGTACAAGTTCCGGAATGCCTCGATTAATGTCACGGATCTGGA
droRho1 scf7180000779917:310006-310332 + TGGGCATTGGCACAATGACCCCCTGGAATTTCTTTGTCACCGCAGAAGATGTGAGTTT------------------------------------------------------AT-------GA---ATGGAATTTT-------------------------GTACACCCGCATCCTA---ATCGATTAA-ACTGAACTTCGGACA--------TCCAAAATCAAAACAACTGCACAACTGGGCCAAGCGTAGTT-------------------------------CTAAGGCGCATT--GCTTATCAGCTTTGTTATTGTT----------------------------------TCTACGGCCCT-------------------------C-GCTGAGACGATAAC-------TCTCT-TTT-CAATTG-CCTTTG-----------TTTACCGCTGACT------------CAAGTTTT---AACCC---------------------------------------TCT--CTTTCTCTCGTTTAGTACTGGAAGTACAAGTTCCGGAATGCATCAATTAATGCCACTGATGTGGA
droBia1 scf7180000302261:3481375-3481701 + TGGGCATTGGCACCATGACCCCGTGGAACTTCTTTGTGACCGCCGAAGATGTGAGTTCG-----------------------------------------------------AT-------GA---ATGGAAATTTT------------------------CCACACCCGCATCCTA---GTCAATCGT-AATGAACTTCGAACA--------AGCGGAATAAAAACAGCTGAGCAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTCGTTGTT---------T-----------------------TTTTACGACCGA---------------------------ACTGAGTCGATATC-------TC----TTT-CGGTTT-CCTTTG-----------TTTTCCGCTGACT------------CAAGCTTC---AACCC---------------------------------------TCT--CTGCTTTTCTTTCAGTACTGGAAGTACAAGTTTCGAAATGCATCGATTAACGCCACCGATCTGGA
droTak1 scf7180000413017:160530-160887 + TGGGCATCGGCACCATGACCCCATGGAACTTCTTTGTCACAGCCGAAGATGTGAGTTCA-----------------------------------------------------AT-------GA---ATGGAAATTTACCAAACCCACACCCAAAC------CCGCACCCGCATCCTA---GTCAATCGC-AGTGAACTTCGGACA--------TGTGGATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTTGTTGTTATTGTTGTGT---------T-------------TTTTACGAT-CA-------------------------C-GCCGAGACGATAAG-------TCTCTTTTTTCCATTT-CCTTTG-----------TTTTCCGCTGACT------------CAAGCTTT---AACCC---------------------------------------TCT--CTC--TTTTTTGCAGTACTGGAAGTACAAGTTTCGGAATGCTTCTATTAACACCACCGATCTGGA
droEug1 scf7180000409554:1091904-1092217 - TAGGAATTGGCACAATGACCCCGTGGAACTTCTTTGTGACCGCTGAAGATGTAAGTTTC-----------------------------------------------------AT-------GA---ATGGAAATGT-------------------------TCACGCCCGCATCCAA---GTCAATCAA-ACTGAACTTCGGACA--------TCTGAAATCCAAACAGCTGAACAAGTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGTT--TCTTATCAGCTTTTTT--------TATTGTGC-----------------------TTTTAC-----A-------------------------C-GCTGAGACGATAAC-------TCT----TT-TGTTTT-TCTTTG-----------TTTTCTACTGACT------------A-AGC--------------------------------------------------ACT--CTGTTTTTCTTTCAGTACTGGAAGTATAAGTTCCGGAATGCATCAATTAATATCACAGATGTGGA
dm3 chr2L:357142-357472 - TGGGCATTGGTACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATGTAAGTTTA-----------------------------------------------------AC-------GA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTCAATTTA-ACTGAACTTCGGACA--------TATCAATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAGCTTTGTCGTCGTT---------T-----------------------CTTTACGACCCA-------------------------C-ACCCAGACGAAAAC-------TCTCTTTTT-TGATTT-TCTTTG-----------TTTTCCGCTGACT------------TACGCTTT---AACCC---------------------------------------TGT--TCGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGA
droSim2 2l:336060-336395 - dsi_14770 TGGGCATTGGCACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATGTGAGTTTA-----------------------------------------------------GTGGAAGTGGA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTTAATTTA-ACTGAACTTCGGACA--------TATTAATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAGCTTTGTCGTCGTT----------------------------------TCTACGACCCA-------------------------C-ACTCAGGCGATAAC-------TCTCTTTTT-TGATTT-TCTTTG-----------TTTTCCGCTGACT------------TACGCTTT---AACCC---------------------------------------TGT--CTGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGA
droSec2 scaffold_14:346860-347192 - TGGGCATTGGCACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATGTGAGTTTA-----------------------------------------------------GTGGAAGTGGA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTTAATTTG-ACTGAACTTCGGACA--------TATTTATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAGCTTTGTCGTCGTT----------------------------------TCTACGACCCA-------------------------C-CCTCAGGCGATAAC-------TCTCT-TTT-TGATTT-TCTTTG-----------TTTTCCGCTGCGT--------------AGTTTT---AACCC---------------------------------------TGT--CTGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGA
droYak3 2L:346342-346671 - TGGGCATTGGCACCATGACCCCGTGGAACTTCTTTGTGACTGCGGAAGATGTGAGTGCT-----------------------------------------------------AC-------GA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTCAATTTA-ACTGAACTTCGGACA--------TATAATTTTCATACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGTGCT--GCTTATCAGCTTTGTCGTCGTC---------T-----------------------TTTTACGACCCA-------------------------C-ACTGAGACGATAAC-------TCTCT-TTC-CGATTT-TCTTTG-----------TTTTCCGCTGACT------------CAAGCTTT---AACCG---------------------------------------CGT--CTGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGAAATGCATCGATTAATAACACAGATCTGGA
droEre2 scaffold_4929:410742-411071 - TGGGCATTGGCACCATGACCCCGTGGAATTTCTTTGTTACTGCGGAAGATGTAAGTTTA-----------------------------------------------------AC-------AA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTCAATTTA-ACTGAACTTCGGACA--------TGTCAATCCCAAACAGCAGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTCGTCGTT---------T-----------------------TTTTACGACCCA-------------------------C-ACTGAGACGATAAC-------TCTCT-TTT-TGATTT-TCTTTG-----------TTTTCCGCTGACT------------CAAACTTT---AACCG---------------------------------------TGT--CTGTTTCTCTTTCAGTACTGGAAGTACAAGTTCCGAAATGCATCGATCAATAACACAGATCTGGA
dp5 4_group3:1289787-1290191 + dps_1495 TTGGCATTGGAACGATGACGCCGTGGAACTTCTTTGTGACAGCGGAAGATGTGAGTATTC----------------------------------------------------AT---------------GAAATAT-------------------------TTCCACCCGCATTTTC---CTTTATGAA-ACTGCACTTCGAACC--------T-------------------GCATGTGGGCCAAGCGTAAATCTGCCGCCGTTGTAGTCGCCAGCGTCGACGTCTAAGGCGCG-----CTTATCTGCTTTGGCATTGTT---------TGTTTTTTTTTTTT--TTT-----TGTTACGACAG---------------TTGTTGTTGCTCGCTT--GTGGCTA------TCGT----CTTT-AGGTTT-TCTTTG-----------TTTTGTGCTAATTATGGGGTTGAGTCACCCTTC---AGCCCTGGCTTATACGAAAATGTGC----TAACTCGTTCTCTT-TTT-TTTCATCCTTTCACAGTATTGGAAGTACAAATTCCGCAATACCACTCTCAATGGCAGTGATCCGGA
droPer2 scaffold_1:2761646-2762047 + TTGGCATTGGAACGATGACGCCGTGGAACTTCTTTGTGACAGCGGAAGATGTGAGTATTC----------------------------------------------------AT---------------GAAATAT-------------------------TTCCACCCGCATTTTC---CTTTATGAA-ACTGCACTTCGAACC--------T-------------------GCATGTGGGCCAAGCGTAAATCTGCCGCCGTTGTCGTCGCCAGCGTCGACGTCTAAGGCGCG-----CTTATCTGCTTTGGCATTGTT---------TGTTTTTTTTT-----TTT-----TGTTACGACAG---------------TTGTTGTTGCTCGCTT--GTGGCTA------TCGT----CTTT-AGGTTT-TCTTTG-----------TTTTGTGCTAATGATGGGGTTGAGTCACCCTTC---AGCCCTGGCTTATACGAAAATGTGC----TAGCTCGTTGACTT-TTT-TTTCATCCTTTTACAGTATTGGAAGTACAAATTCCGCAATACCACTCTCAATGGCAGTGATCCGGA
droWil2 scf2_1100000004516:1431020-1431441 + TGGGAATTGGTACAATGACGCCATGGAATTTCTTTGTAACCGCCGAAGATGTAAGTGCAAATGATGATGGGGAGGAGGAGATCAAGAAGGGAACAAG-GTCATTCGATATAATA-------GA---ATGCAAACATT------------------------ATAAGCCCGCATCTTT---ACAAATTTATGTTGAACTTCGAACG--------CAGT----------TGCGGAGAAAATAGAACAATTGTTGTT----------------------------------------------CTTATCTACTTTGGCATTGTTT------CGC---TTTTGGTTTTATAGTTGTTTTCCTACTACTA---------------------------CTAT--AT-----ACTCTATCGT----CTTT-AGATTTTCCTTTG------------TTTGCTTTGACT------------CACCCCTACCAAACCCAAGCCAAGCCCAAAGTGTTCGTCGTAACCCACTTTTCC-TTT-CTCCCTTCTTTTGCAGTATTGGAAATATAAATTCCGTAACACAACGAGCAATTCCACAGATCCCGA
droVir3 scaffold_12963:10856827-10856882 + TCGGCATTGGCACCATGACGCCCTGGAACTTTTTTGTCACCGCCGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:19578612-19578694 + TTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTC---AATTC---------------------------------------CCT-CCCCTTCTTTTCGCAGTATTGGAAATACAAGTTCCGCAACACAACGCTGAACGGGACCCAGCCCGA
droGri2 scaffold_8319:130-201 - GCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-------------------------------------------------------------------------------------------------------------TGT----TGT-GCTCTCTATTTCTCTCCCCTCTCACTCTCT------------CTCTCTCT---CTC---------------------------------------TGTCT--CTTTCCCTCTGTCA---------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGGGCATCGGAACAATGACACCCTGGAACTTTTTTGTGACGGCGGAAGATGTAAGTC-A-----------------------------------------------------ATGTTAAT-GAATTGTGGAAATTTTCCAGA---------------------TAGCCCGCATCT-----------GAA-ACTGTTCTTTGGACA--------CC------------ATAT--GGATCTGGGACAAGCGCAAAT-------------------------------CTAAGTAACGCTCGGCTTATCAGCATTGTT-T-----------TGC-----------------------TTTTATGAATGC----------GACGTCGCCGTCGCC--TTTGAGACGATAAC-------TCT--TTTT-AGCTTT-TCTTTGTAC--------TTTTTTGCTGACT------------CAAACCT----AACCC----------------TTCCGCTGTCTCTCTCTC---TCTCTCTTTCCCTTTCTCACAGTACTGGAAGTACAAATTCCGTAATACCTCGATTAATGCCACCGATCTGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....ATCGGAACAATGACACCCTGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
TGGGAATTGGAACAATGACACCCTGGAATTTTTTTGTGACGGCGGAAGATGTAAGTC-A-----------------------------------------------------ATGTTAAT-TAATTGTGGAAATTTTCCAGA---------------------TCGCCCGCATCT-----------GAA-ACTGTTCTTTGAACA--------------------ACACAT--GGATCTGGAACAAGCGCAAAT-------------------------------CTAAGTAACGCT-GGCTTATCAGCATTGTT-T-----------TGC-----------------------TTTTATGAATGCTGCTGCCGTCGTCGTCGCCGTCGCC--TTTACGACGATAAC-------TCT--TTTT-AGCTTT-TCTTTGTAC--------TTTTTTGCTGACT------------CAAGCCT----AACCC----------------TTCCGCCGTC-----------TCTCTCTTTCCCTTTCTCACAGTACTGGAAGTACAAATTCCGTAATACCTCGATCAATGCCACAGATTTGGASizeHit CountTotal NormTotal
No Reads
droKik1
TGGGCATAGGCACCATGACGCCCTGGAATTTCTTTGTGACGGCAGAAGATGTGAGTTAA-AGCCTGCTGGGGGTTCGGGAATGGAAATGGGAATCGGAATTAATTTCCATGAAT-------GA---GTGGAAATTT-------------------------TCCAGCCCGCATC------------------TGAACTTCGCACA--------TC---------------TCGGGAAGTGGGCCAAGCGTAACT-------------------------------CTAAGGCG--CT--GCTTATCAGTTTTGGCATTGTTTTTGTTT--T-----------------------TTTTACGACTCA-------------------------A-AC---GACGATAAC-------TCT----TT-GGATTT-TCTTTGTGT--T--TTGTTTTTTGCTGACT------------CAAGCTT----AACCC-------------------------------------TTCCT--CTCTTGCTCTTCCAGTACTGGAAATACAAGTTCCGCAATACCTCGATCAATGGCACGGATCCAGASizeHit CountTotal NormTotal
No Reads
droFic1
TCGGAATCGGCACCATGACACCGTGGAACTTCTTTGTGACCGCCGAAGACGTAAGTTTA-----------------------------------------------------AT-------GA---ATGGAAATTTTCCACA-------------------CCACACCCGCATCCTCCTAGTCAAGTGA-CATGAACTTCGGACGTACACATATGTGGATTCCAAACAAGGGAGCAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCA--GCTTATCAGCTTTGCTATTGTT---------T-----------------------TTTTACGACTTA-------------------------C-GCTGAGACGATAAC-------TCT--TTTC-GAATTT-TCTTTG-----------TTTT-CGCTGATT------------CAGGCTTT---AACCA----------------T-------------------CTTTCT--GTCTCCCTCTCTCAGTACTGGAAGTATAAGTTTCGCAATACCTCTCTCAACTACACGGATCTGGASizeHit CountTotal NormTotal
No Reads
droEle1
TAGGCATTGGCACCATGACCCCCTGGAACTTCTTTGTCACCGCTGAAGATGTGAGTATTT-----------------------------------------A----------A-------------CTCAAAATAA----------------TAATTGTTCTTTTACCCGCATCATA---GTCGATTAA-ACTGAACTTCGGACA--------TCTAAAATTCAAACAACTGAGCAACTGGGCCAATCGTAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTCATTGTG---------T-----------------------TCTTACGACCTA-------------------------C-GCTGAGACGATAAC-------TCTTT--TT-AAATTTTCCTTTGTTT--TCCTTGTTTTCCACTGACT------------CAAGCTTT---AAACT---------------------------------------TCT--CTGTCTCTACTTCAGTACTGGAAGTACAAGTTCCGGAATGCCTCGATTAATGTCACGGATCTGGASizeHit CountTotal NormTotal
No Reads
droRho1
TGGGCATTGGCACAATGACCCCCTGGAATTTCTTTGTCACCGCAGAAGATGTGAGTTT------------------------------------------------------AT-------GA---ATGGAATTTT-------------------------GTACACCCGCATCCTA---ATCGATTAA-ACTGAACTTCGGACA--------TCCAAAATCAAAACAACTGCACAACTGGGCCAAGCGTAGTT-------------------------------CTAAGGCGCATT--GCTTATCAGCTTTGTTATTGTT----------------------------------TCTACGGCCCT-------------------------C-GCTGAGACGATAAC-------TCTCT-TTT-CAATTG-CCTTTG-----------TTTACCGCTGACT------------CAAGTTTT---AACCC---------------------------------------TCT--CTTTCTCTCGTTTAGTACTGGAAGTACAAGTTCCGGAATGCATCAATTAATGCCACTGATGTGGASizeHit CountTotal NormTotal
No Reads
droBia1
TGGGCATTGGCACCATGACCCCGTGGAACTTCTTTGTGACCGCCGAAGATGTGAGTTCG-----------------------------------------------------AT-------GA---ATGGAAATTTT------------------------CCACACCCGCATCCTA---GTCAATCGT-AATGAACTTCGAACA--------AGCGGAATAAAAACAGCTGAGCAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTCGTTGTT---------T-----------------------TTTTACGACCGA---------------------------ACTGAGTCGATATC-------TC----TTT-CGGTTT-CCTTTG-----------TTTTCCGCTGACT------------CAAGCTTC---AACCC---------------------------------------TCT--CTGCTTTTCTTTCAGTACTGGAAGTACAAGTTTCGAAATGCATCGATTAACGCCACCGATCTGGASizeHit CountTotal NormTotal
No Reads
droTak1
TGGGCATCGGCACCATGACCCCATGGAACTTCTTTGTCACAGCCGAAGATGTGAGTTCA-----------------------------------------------------AT-------GA---ATGGAAATTTACCAAACCCACACCCAAAC------CCGCACCCGCATCCTA---GTCAATCGC-AGTGAACTTCGGACA--------TGTGGATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTTGTTGTTATTGTTGTGT---------T-------------TTTTACGAT-CA-------------------------C-GCCGAGACGATAAG-------TCTCTTTTTTCCATTT-CCTTTG-----------TTTTCCGCTGACT------------CAAGCTTT---AACCC---------------------------------------TCT--CTC--TTTTTTGCAGTACTGGAAGTACAAGTTTCGGAATGCTTCTATTAACACCACCGATCTGGASizeHit CountTotal NormTotal
No Reads
droEug1
TAGGAATTGGCACAATGACCCCGTGGAACTTCTTTGTGACCGCTGAAGATGTAAGTTTC-----------------------------------------------------AT-------GA---ATGGAAATGT-------------------------TCACGCCCGCATCCAA---GTCAATCAA-ACTGAACTTCGGACA--------TCTGAAATCCAAACAGCTGAACAAGTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGTT--TCTTATCAGCTTTTTT--------TATTGTGC-----------------------TTTTAC-----A-------------------------C-GCTGAGACGATAAC-------TCT----TT-TGTTTT-TCTTTG-----------TTTTCTACTGACT------------A-AGC--------------------------------------------------ACT--CTGTTTTTCTTTCAGTACTGGAAGTATAAGTTCCGGAATGCATCAATTAATATCACAGATGTGGASizeHit CountTotal NormTotal
No Reads
dm3
TGGGCATTGGTACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATGTAAGTTTA-----------------------------------------------------AC-------GA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTCAATTTA-ACTGAACTTCGGACA--------TATCAATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAGCTTTGTCGTCGTT---------T-----------------------CTTTACGACCCA-------------------------C-ACCCAGACGAAAAC-------TCTCTTTTT-TGATTT-TCTTTG-----------TTTTCCGCTGACT------------TACGCTTT---AACCC---------------------------------------TGT--TCGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGTTCCGGAATGCATCGAT..................23112.00120000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000
.......................TGGAATTTCTTTGTGACTGCGGAAGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGTTCCGGAATGCATCGATT.................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CAGCTGAACAACTGGGCCAAG...............................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGTACAAGTTCCGGAATGCA.......................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCTGAACAACTGGGCCAAGCGCAATT-------------------------------C........................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAAACAGCTGAACAACTGGGCCAAGC..............................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-TCTTTG-----------TTTTCCGCTGACT------------TACGC........................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GT--GCTTATCAGCTTTGTCGTC........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCTTTG-----------TTTTCCGCTGACT------------TACGCTT......................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGTGACTGCGGAAGATGTAAGTTTA-----------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAAGTACAAGTTCCGGAATGC........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TGAACAACTGGGCCAAGCGCA...........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTT-TGATTT-TCTTTG-----------TTTTCCGCT.............................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCCGGAATGCATCGATT.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTTTGTGACTGCGGAAGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGACCCCGTGGAATTTCTTTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACT------------TACGCTTT---AACCC---------------------------------------TGT--TCGC.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGTTCCGGAATGCATCGATTAA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTTA-ACTGAACTTCGGACA--------TATCAAT..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATTGGTACCATGACCCCGTGGAATTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCATTGGTACCATGACCCCGTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTTTCAGTACTGGAAGTACAAGTT.................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TATCAGCTTTGTCGTCGTT---------T-----------------------CTTTAC..............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTTTGTGACTGCGGAAGATGTAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGTTCCGGAATGCATCGA...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGTTCCGGAATGCATCGAA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................CAAACAGCTGAACAACTGGGCCAAGCG.............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCCGGAATGCATCGATTAAT..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AACAGCTGAACAACTGGGCCAAGCG.............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................CA--------TATCAATTCCAAACAGCTGAACAAC........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TCGCTTCTCTTTCAGTACTG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTCTTTGTGACTGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTCTTTGTGACTGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTTA-ACTGAACTTCGGACA--------TATCAATTC........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................C-ACCCAGACGAAAAC-------TCTCTTTTT-TGA...........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTTTGTGACTGCGGAAGATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGTTCCGGAATGCA.......................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTT-TGATTT-TCTTTG-----------TT....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CAGCTGAACAACTGGGCCAAGCGCAAT.........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGACCCCGTGGAATTTCTTTGTGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........GTACCATGACCCCGTGGAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GGAATTTCTTTGTGACTGCGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTTTGTGACTGCGGAAGATGTAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCGGACA--------TATCAATTCCAAACAGCTGAA............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTCTTTGTGACTGCGGAAGATGTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CA-------------------------C-ACCCAGACGAAAAC-------TCTCTTTTT-..............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGTGACTGCGGAAGATGTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................TTGTGACTGCGGAAGATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................TAAGTTTA-----------------------------------------------------AC-------GA---GTGGAAATTT-------------------------CCGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTCTTTGTGACTGCGGAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAA..................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTT---AACCC---------------------------------------TGT--TCGCTTCTCTTT.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCTTTGTGACTGCGGAAGATGTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTGGTACCATGACCCCGTGGAATTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCAGCTTTGTCGTCGTT---------T-----------------------CTTTACGACCC.........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AAGGCGCGGT--GCTTATCAGC.................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTGTGACTGCGGAAGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTTGTGACTGCGGAAGATGTAAGTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTT-------------------------CCGCACCCGCATCCTA---GT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGAATTTCTTTGTGACTGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGTACAAGTTCCGGAA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TACCATGACCCCGTGGAATTTCTTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTCGGACA--------TATCAATTCCAAACAGCTGA.............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTGACTGCGGAAGATGTAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AC-------TCTCTTTTT-TGATTT-TCTTTG-----------TTTT..................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GGT--GCTTATCAGCTTTGTCGTC........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GT--GCTTATCAGCTTTGTCGTCG.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------TACGCTTT---AACCC---------------------------------------TGT--TCGCTTCTCT.......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACCCCGTGGAATTTCTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CGTT---------T-----------------------CTTTACGACCCA-------------------------C-ACCCAGAC.....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTT-TGATTT-TCTTTG-----------TTTT..................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................CGTGGAATTTCTTTGTGACTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CTAAGGCGCGGT--GCTTATCAGC.................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGACT------------TACGCTTT---AACCC---------------------------------------TG....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TACGACCCA-------------------------C-ACCCAGACGAAAAC-------TC......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAATTTCTTTGTGACTGCGGAAGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTTTGTGACTGCGGAAGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATTAATAACACAGC......1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
droSim2
TGGGCATTGGCACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATGTGAGTTTA-----------------------------------------------------GTGGAAGTGGA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTTAATTTA-ACTGAACTTCGGACA--------TATTAATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAGCTTTGTCGTCGTT----------------------------------TCTACGACCCA-------------------------C-ACTCAGGCGATAAC-------TCTCTTTTT-TGATTT-TCTTTG-----------TTTTCCGCTGACT------------TACGCTTT---AACCC---------------------------------------TGT--CTGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................TGAACAACTGGGCCAAGCGCA...........................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
TGGGCATTGGCACCATGACCCCGTGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
....................................................................................................................................................................................................................................................................................................................CTTTGTCGTCGTT----------------------------------TCTACGACC..........................................................................................................................................................................................................................................2211.00100100000000000000
droSec2
TGGGCATTGGCACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATGTGAGTTTA-----------------------------------------------------GTGGAAGTGGA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTTAATTTG-ACTGAACTTCGGACA--------TATTTATTCCAAACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGGT--GCTTATCAGCTTTGTCGTCGTT----------------------------------TCTACGACCCA-------------------------C-CCTCAGGCGATAAC-------TCTCT-TTT-TGATTT-TCTTTG-----------TTTTCCGCTGCGT--------------AGTTTT---AACCC---------------------------------------TGT--CTGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................TTTGTGACTGCGGAAGATGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..................................................................................................................................................................................................................................................................................................................AGCTTTGTCGTCGTT----------------------------------TCTACG.............................................................................................................................................................................................................................................2111.0011000
...................................................TGAGTTTA-----------------------------------------------------GTGGAAGTGGA---GT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................................................TGTGAGTTTA-----------------------------------------------------GTGGAAGTGGA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................................................................................................................................................................................GTTAATTTG-ACTGAACTTCGG............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................AGATGTGAGTTTA-----------------------------------------------------GTGGAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCGATAAC-------TCTCT-TTT-T.............................................................................................................................................................................2111.0010100
.................................TTGTGACTGCGGAAGATGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCGGAATGCATCGA...................1811.0010010
droYak3
TGGGCATTGGCACCATGACCCCGTGGAACTTCTTTGTGACTGCGGAAGATGTGAGTGCT-----------------------------------------------------AC-------GA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTCAATTTA-ACTGAACTTCGGACA--------TATAATTTTCATACAGCTGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGTGCT--GCTTATCAGCTTTGTCGTCGTC---------T-----------------------TTTTACGACCCA-------------------------C-ACTGAGACGATAAC-------TCTCT-TTC-CGATTT-TCTTTG-----------TTTTCCGCTGACT------------CAAGCTTT---AACCG---------------------------------------CGT--CTGCTTCTCTTTCAGTACTGGAAGTACAAGTTCCGAAATGCATCGATTAATAACACAGATCTGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................CTTCTTTGTGACTGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000
........................................................................................................................................................................................ATTTA-ACTGAACTTCGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
....CATTGGCACCATGACCCCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................TCGTC---------T-----------------------TTTTACGACCCA-------------------------C-ACTGAGA......................................................................................................................................................................................................2611.00101000000000
..........................AACTTCTTTGTGACTGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................TTCTTTGTGACTGCGGAAGATTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
............................CTTCTTTGTGACTGCGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTG-----------TTTTCCGCTGACT------------CAA..........................................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................AGCTGAACAACTGGGCCT.................................................................................................................................................................................................................................................................................................................................................................1830.33110000000000
droEre2
TGGGCATTGGCACCATGACCCCGTGGAATTTCTTTGTTACTGCGGAAGATGTAAGTTTA-----------------------------------------------------AC-------AA---GTGGAAATTT-------------------------CCGCACCCGCATCCTA---GTCAATTTA-ACTGAACTTCGGACA--------TGTCAATCCCAAACAGCAGAACAACTGGGCCAAGCGCAATT-------------------------------CTAAGGCGCGCT--GCTTATCAGCTTTGTCGTCGTT---------T-----------------------TTTTACGACCCA-------------------------C-ACTGAGACGATAAC-------TCTCT-TTT-TGATTT-TCTTTG-----------TTTTCCGCTGACT------------CAAACTTT---AACCG---------------------------------------TGT--CTGTTTCTCTTTCAGTACTGGAAGTACAAGTTCCGAAATGCATCGATCAATAACACAGATCTGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGTTCCGAAATGCATCA....................2211.0011000000
dp5
TTGGCATTGGAACGATGACGCCGTGGAACTTCTTTGTGACAGCGGAAGATGTGAGTATTC----------------------------------------------------AT---------------GAAATAT-------------------------TTCCACCCGCATTTTC---CTTTATGAA-ACTGCACTTCGAACC--------T-------------------GCATGTGGGCCAAGCGTAAATCTGCCGCCGTTGTAGTCGCCAGCGTCGACGTCTAAGGCGCG-----CTTATCTGCTTTGGCATTGTT---------TGTTTTTTTTTTTT--TTT-----TGTTACGACAG---------------TTGTTGTTGCTCGCTT--GTGGCTA------TCGT----CTTT-AGGTTT-TCTTTG-----------TTTTGTGCTAATTATGGGGTTGAGTCACCCTTC---AGCCCTGGCTTATACGAAAATGTGC----TAACTCGTTCTCTT-TTT-TTTCATCCTTTCACAGTATTGGAAGTACAAATTCCGCAATACCACTCTCAATGGCAGTGATCCGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......TTGGAACGATGACGCCGTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..GGCATTGGAACGATGACGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCGCAATACCACTCTC.................2011.0010010000000
...................GCCGTGGAACTTCTTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
....CATTGGAACGATGACGCCGTGGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
............................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTT--TTT-----TGT.................................................................................................................................................................................................................................................18200.0510000100000
droPer2
TTGGCATTGGAACGATGACGCCGTGGAACTTCTTTGTGACAGCGGAAGATGTGAGTATTC----------------------------------------------------AT---------------GAAATAT-------------------------TTCCACCCGCATTTTC---CTTTATGAA-ACTGCACTTCGAACC--------T-------------------GCATGTGGGCCAAGCGTAAATCTGCCGCCGTTGTCGTCGCCAGCGTCGACGTCTAAGGCGCG-----CTTATCTGCTTTGGCATTGTT---------TGTTTTTTTTT-----TTT-----TGTTACGACAG---------------TTGTTGTTGCTCGCTT--GTGGCTA------TCGT----CTTT-AGGTTT-TCTTTG-----------TTTTGTGCTAATGATGGGGTTGAGTCACCCTTC---AGCCCTGGCTTATACGAAAATGTGC----TAGCTCGTTGACTT-TTT-TTTCATCCTTTTACAGTATTGGAAGTACAAATTCCGCAATACCACTCTCAATGGCAGTGATCCGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATACGAAAATGTGC----TAG..................................................................................2011.001000001
............CGATGACGCCGTGGAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droWil2
TGGGAATTGGTACAATGACGCCATGGAATTTCTTTGTAACCGCCGAAGATGTAAGTGCAAATGATGATGGGGAGGAGGAGATCAAGAAGGGAACAAG-GTCATTCGATATAATA-------GA---ATGCAAACATT------------------------ATAAGCCCGCATCTTT---ACAAATTTATGTTGAACTTCGAACG--------CAGT----------TGCGGAGAAAATAGAACAATTGTTGTT----------------------------------------------CTTATCTACTTTGGCATTGTTT------CGC---TTTTGGTTTTATAGTTGTTTTCCTACTACTA---------------------------CTAT--AT-----ACTCTATCGT----CTTT-AGATTTTCCTTTG------------TTTGCTTTGACT------------CACCCCTACCAAACCCAAGCCAAGCCCAAAGTGTTCGTCGTAACCCACTTTTCC-TTT-CTCCCTTCTTTTGCAGTATTGGAAATATAAATTCCGTAACACAACGAGCAATTCCACAGATCCCGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................CGCCATGGAATTTCTTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
....................................TAACCGCCGAAGATGTAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................ACGCCATGGAATTTCTTTGTAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................CATGGAATTTCTTTGTAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACAACGAGCAATTCCACA........2111.00100100
droVir3
TCGGCATTGGCACCATGACGCCCTGGAACTTTTTTGTCACCGCCGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................GCCCTGGAACTTTTTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.............CATGACGCCCTGGAACTTTTTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTC---AATTC---------------------------------------CCT-CCCCTTCTTTTCGCAGTATTGGAAATACAAGTTCCGCAACACAACGCTGAACGGGACCCAGCCCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTGAACGGGACCCAGCCC..2212.002000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATACAAGTTCCGCAACACAACGCTGA................2911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAACGGGACCCAGCCCGA2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACAACGCTGAACGGGACCCA......2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGAACGGGACCCAGCC...2011.001100000
droGri2
GCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-------------------------------------------------------------------------------------------------------------TGT----TGT-GCTCTCTATTTCTCTCCCCTCTCACTCTCT------------CTCTCTCT---CTC---------------------------------------TGTCT--CTTTCCCTCTGTCA---------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:46 PM