ID:

dan_965

 Coordinate:

scaffold_12943:4479775-4479925 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.4 -5.1 -5.0

Flybase annnotation

CDS [Dana\GF20690-cds]; exon [dana_GLEANR_390:2]; intron [Dana\GF20690-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCGCATGATGTCTAGTGGAGTGGTGGTGGTACAGGCTCCCCCTTCCGGGTGTGGGCCAAGGAAAACCTGTGGCACTGTGGTTTCTGGCCAACCAGTGATGGATTGGCAACAGCAACAGCAACTCCAACAACAACAGCAGTACCAACAGCAACAACAGTACCAACAGCAACAACAGTACCAACCGCAACAACAGTTCCACCAACAACAGGAAACGGTCTCCGCACTTCCTCCAAAATACGAACAGGCGGTCT
*****************************************************************************************......((.((((...((..........))...)))).))...........*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V055
head
 V106
head
..GCATGATGTCTAGTGGAGT...................................................................................................................................................................................................................................... 19 0 1 3.00 3 1 0 2 0 0
...........CTAGTGGAGTGGTGGTGGT............................................................................................................................................................................................................................. 19 0 1 3.00 3 0 0 2 0 1
......GATGTCTAGTGGAGTGGTGGTGGT............................................................................................................................................................................................................................. 24 0 1 3.00 3 0 0 3 0 0
.....................................................................................................................................................................................................................GGTCTCCGCACTTCCTCCAAAATAC............. 25 0 1 3.00 3 3 0 0 0 0
.........................................................................................AACCAGTGATGGATTGGCAACAGC.......................................................................................................................................... 24 0 1 3.00 3 1 1 1 0 0
.........GTCTAGTGGAGTGGTGGTGGT............................................................................................................................................................................................................................. 21 0 1 2.00 2 1 0 1 0 0
...........................................................................................................AAAAGCAACAGCAACTCCAACAAC........................................................................................................................ 24 1 1 2.00 2 0 2 0 0 0
.................................................................................................................AACAGCAACTCCAACAACAACAGCA................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................................................GGTCTCCGCACTTCCTCCAAA................. 21 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................AACTCCAACAACAACAGCAGT............................................................................................................... 21 0 1 2.00 2 0 0 2 0 0
................................................................................................................................................................................................GTTCCACCAACAACAGGAAAC...................................... 21 0 1 2.00 2 0 2 0 0 0
..............................................................................................................................................................................................CAGTTCCACCAACAACAGGAAAC...................................... 23 0 1 1.00 1 0 1 0 0 0
..................................................................................................................ACAGCAACTCCAACAACAACAGCAGT............................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
................................................................................................................................AACAACAGCAGTACCAACAGCAACAACA............................................................................................... 28 0 1 1.00 1 0 1 0 0 0
....ATGATGTCTAGTGGAGTG..................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.............AGTGGAGTGGTGGTGGTACA.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................AACCAGTGATGGATTGGC................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0
........................................................................CACTGTGGTTTCTGGCCAACC.............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
..............................ACAGGCTCCCCCTTCCGGGTGTGGGCC.................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
...............................................................AACCTGTGGCACTGTGGTTTCTGGC................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
............................................................................................................................CAACAACAGCAGCAGTACCAACAGCAAC................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
..............................ACAGGCTCCCCCTTCCGGGTGTG...................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................GCAACTCCAACAACAACAGCA................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................ACAACAGTTCCACCAACAACAGGAAAC...................................... 27 0 1 1.00 1 1 0 0 0 0
..GCATGATGTCTAGTGGAGTGGTGGTG............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................GGCAACAGCAACAGCAACTCC.............................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
............................................................GAAAACCTGTGGCACTGTGGC.......................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0
....ATGATGTCTAGTGGAGTGGTGGTGG.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0
.........................GTGGTACAGGCTCCCCCTTCCGGGC......................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..GCATGATGTCTAGTGTAGT...................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0
....................................................................................................................ATCAACTCCAACAACAACAGCAGTACC............................................................................................................ 27 1 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................AACAACAGTACCAACAGCAACAACA............................................................................. 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................CAACAGCAGTACCAACAGCAAC................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................CAACAGCAGTACCAACAGCAACAACAGT............................................................................................. 28 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................ACAGTACCAACCGCAACAAC............................................................ 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................GCAACAGCAACAGCAACTCCAACAAC........................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................ACCAACCGCAACAACAGTTCCACCAA................................................. 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................AGCAGTACCAACAGCAACAACAGC............................................................................................. 24 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................AACAGGAAACGGTCTCCGC............................. 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................GCAACAGCAACAGCAACTCCAAC........................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................TCCTCCAAAATACGAACAGG...... 20 0 1 1.00 1 0 1 0 0 0
.............AGTGGAGTGGTGGTGGTAC........................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................TACCAACAGCAACAACAGTACCAACAGC.................................................................................... 28 0 1 1.00 1 1 0 0 0 0
................................................................ACCTGTGGCACTGTGGTTTCTGGC................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.....................GGTGGTGGTACAGGCTCCCCCTTCC............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
........................................................CAAGGAAAACCTGTGGCACTGTGGT.......................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
...................................................................................................................................................................................................................................CTCCAAAATACGAACAGGCGGTCT 24 0 1 1.00 1 0 0 1 0 0
.............................................CGGGTGTGGGCCAAGGAAAACCTGTG.................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
...........................................................................................................AACAGCAACAGCAACTCCAAC........................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................ACCAACAGCAACAACAGTACCAACCGCA................................................................. 28 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................AGTACCAACCGCAACAACAG.......................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................GCAACTCCAACAACAACAGC.................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
...............................................................................GTTTCTGGCCAACCAGTGATGGATTG.................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................AACGGTCTGCGCACTTCCTC..................... 20 1 1 1.00 1 1 0 0 0 0
....ATGATGTCTAGTGGAGTGGTGGTGGT............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................TCCACCAACAACAGGAAAC...................................... 19 0 1 1.00 1 0 0 0 1 0
............................................................................................................ACAGCAACAGCAACTCCAACAACAAC..................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................CAGTGATGGATTGGCAACA............................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0
.....TGATGTCTAGTGGAGTGGTGGTGGTA............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0
............................................................................................................................................................................CAGTACCAACCGCAACAACAGTT........................................................ 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................CCACCAACAACAGGAAACGGTCTCCGCAC........................... 29 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................AACAACAGGAAACGGTCTCCGCACT.......................... 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................CAACAGTACCAACAGCAACAACAGT........................................................................... 25 0 1 1.00 1 0 0 1 0 0
..................................................................................TCTGGCCAACCAGTGATGGAT.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................ACAGTTCCACCAACAACAGGAAAC...................................... 24 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................CAACAACAGTACCAACCGCAAC............................................................... 22 0 1 1.00 1 0 1 0 0 0
.................................................................................TTCTGGCCAACCAGTGATGGATTGG................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.................................................................................TTCTGGCCAACCAGTGATGGATT................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
................................................................................................................................AACAACAGCAGTACCAACAGC...................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................CAACAACAGTACCAACCGC.................................................................. 19 0 1 1.00 1 0 1 0 0 0
..................................AGGCCCCCTTCCGGGTGTGGG.................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................AACTCCAACAACAACAGCA................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................CCGCAACAACAGTTCCACCA.................................................. 20 0 1 1.00 1 1 0 0 0 0
........................................................................................................GGCTACAGCAACAGCAACTCCAAC........................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................CGCAACAACAGTTCCACCAACGACAGGA......................................... 28 1 1 1.00 1 0 1 0 0 0
........................................................................................................................ACTCCAACAACAACAGCAGT............................................................................................................... 20 0 1 1.00 1 0 0 0 1 0
...........................................................GGAAAACCTGTGGCACTGTGGT.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................AACTCCAACAACAACAGCAGTACCAAC......................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
........................................................CAAGGAAAACCTGTGGCACTGT............................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................................................................................CCTCCAAAATACGAACAGGC..... 20 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................GGTCTCCGCACTTCCTCCAAAATACG............ 26 0 1 1.00 1 1 0 0 0 0
........................................................CAAGGAAAACCTGTGGCACTGTG............................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...............................................................AGCCTGTGGCACTGTGGTTTCTGGCC.................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
..................................................................................TCTGGCCAACCAGTGATGG...................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
......GATGTCTAGTGGAGTGGTGGT................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................TCCAACAACAACAGCAGTACCAAC......................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................AAACGGTCTCCGCACTTCCTCCAAAATAC............. 29 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................AACAGTACCAACCGCAACAAC............................................................ 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................ACAACATTACCAACCGCAAC............................................................... 20 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................CAACAGCAACATCAGTACCAACCTA.................................................................. 25 3 2 0.50 1 1 0 0 0 0
............................................................................................................................................ACCAACAGCAACAACAGTAC........................................................................................... 20 0 2 0.50 1 0 1 0 0 0
..........................................................................................................CAACAGCAACAGCAACTCCA............................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................GTACCAACAGCAACAACAGTACC.......................................................................................... 23 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................ACCAACAGCAACAACAGTAC......................................................................... 20 0 2 0.50 1 0 1 0 0 0
............................................................................................................................................................GTACCAACAGCAACAACAGTACC........................................................................ 23 0 2 0.50 1 0 1 0 0 0
.............................................................................................................CAGCAACAGCAACTCCAAC........................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0
............................................................................................................................................................GGACCAACAGCAACAACAGTA.......................................................................... 21 1 2 0.50 1 0 1 0 0 0
........................................................................................................GTCAACAGCAACAGCAACTCC.............................................................................................................................. 21 1 2 0.50 1 0 1 0 0 0
..........................................................................................................................................GGACCAACAGCAACAACAGTA............................................................................................ 21 1 2 0.50 1 0 1 0 0 0
.................................................................................................................AATAGCAACTCCAACAACAAC..................................................................................................................... 21 1 2 0.50 1 0 1 0 0 0
........................................................................................................GGCAACAGCAACAGCAACT................................................................................................................................ 19 0 5 0.40 2 1 1 0 0 0
.........................................................................................................GCAACAGCAACAGCAACTCC.............................................................................................................................. 20 0 3 0.33 1 0 1 0 0 0
................GGAATGGTGGTAGGACAGGCT...................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 1
.....................................................................TGGCAGTGTGGTTTCTGGTT.................................................................................................................................................................. 20 3 20 0.25 5 5 0 0 0 0
.....................................................................TGGCAGTGTGGTTACTGGC................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 1 0
.....................................................................TGGCAGTGTGGTTTCTGG.................................................................................................................................................................... 18 1 5 0.20 1 1 0 0 0 0
................GGAATGGTGGGAGTACAGGC....................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 1
...................................................................................................................................AACAGGAGTACCAACAGA...................................................................................................... 18 2 8 0.13 1 0 1 0 0 0
.......................................................................................................................................................AAACAGTACCCACAGCAAGAA............................................................................... 21 3 8 0.13 1 0 1 0 0 0
.....................................................................TGGCAGTGTGGTTACTGGGC.................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 1 0
......................................................................................................................................................................AAACAACAGAACCAACCGCCAC............................................................... 22 3 12 0.08 1 0 1 0 0 0
.....................................................................................................................................................................................................AACAACAACTGGAAACGGT................................... 19 2 12 0.08 1 0 0 0 0 1
..............................................GGCCGTGGGCCAAGGAA............................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

GGCGTACTACAGATCACCTCACCACCACCATGTCCGAGGGGGAAGGCCCACACCCGGTTCCTTTTGGACACCGTGACACCAAAGACCGGTTGGTCACTACCTAACCGTTGTCGTTGTCGTTGAGGTTGTTGTTGTCGTCATGGTTGTCGTTGTTGTCATGGTTGTCGTTGTTGTCATGGTTGGCGTTGTTGTCAAGGTGGTTGTTGTCCTTTGCCAGAGGCGTGAAGGAGGTTTTATGCTTGTCCGCCAGA
***************************************************************************************************************......((.((((...((..........))...)))).))...........***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 M044
female body
 M058
embryo
 V055
head
............................................................................CACCAAAGACCGGCGGGTCTCT......................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0
...............................................................................................................................................................................ATGGTTGACGGTGTTGGCAAG....................................................... 21 3 2 0.50 1 0 1 0 0
.......................ACCACCATGTCCAAGGAG.................................................................................................................................................................................................................. 18 2 4 0.25 1 0 0 1 0
..............................................................................................................................................................TGGTTGCCGTGGTTGGCATG......................................................................... 20 3 9 0.11 1 0 1 0 0
............................................................................................................................................TGGTTGCCGTGGTTGGCATG........................................................................................... 20 3 9 0.11 1 0 1 0 0
............................................................................................................................................................................................TGGTCAAGGTGGTTAGTGTC........................................... 20 3 13 0.08 1 0 1 0 0
.....................................................................................................................................................................................................................CCCGAGGCGTTAAGGAG..................... 17 2 17 0.06 1 0 0 0 1
.....................................................................................................................CGTTGATGTTGTTGTTGTCGT................................................................................................................. 21 1 20 0.05 1 0 0 1 0
.......................................................................................................ACCGTAGTCGCTGTCTTTGA................................................................................................................................ 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:4479725-4479975 - dan_965 CCGCATGAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTGGTACA-------------------------------------------GG--------------CTCCCCC---------------------------------------------------TTCCGGGTGTGG-GC------------------CAAGGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGTGGTTTCTGGCCAACCAGTGATGGATTG-----------------------------------------------------GCAACAGCAAC------AGCAACTCCAACAA-------CAAC------------AGCAGT------------ACC---A---ACAGCAACAACAGTACCAACAG----CAACAACAG--TACCAACCGCAACAA---------------CAGT------TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------G---------GTCTCCGCACTTCCTCCAAAATACGAACAGGCGG------TCT
droBip1 scf7180000395973:678314-678582 - CCGCCTGAT-------GTCTC-----------------GTGG-----------------------------CGTTGTGGTGGTCCA-------------------------------------------AA--------------ATCCAAC---------------------------------------------------TTCAGGGTGTG-TTTCTGCTCAAGTGGCC-----------------------ATG-CCGCCAGGTAGAGGCGCCATAACCACAACGGCC---------------------------------------------------------------------------------------------------------------------------A--ATGTGGTTCCAGCCCAAACAGCGAATAATTG-----------------------------------------------------GCAACAGCAAC------AGCAGTTCCAACAA-------CAAC------------AGCAAT------------TCC---A---ACAGCAACA-------------ACAATTCCAACAACC-----------------A------------CCAT------TCCAACAAC--------------------------------------AACAGCAAAT-----------------------------------------------------G---------GCATCCGCACTTCCTCCAAAATACGAACAGGCCATAGCCGCCC
droKik1 scf7180000302270:453268-453495 - CAGGATGAT-------GGCCA-----------------GGGG-----------------------------CATTGTGGTTGTGCC------------------AC----------------------------------------------------------------------------------------------------------------------AGGTGGCCACGCCT------------------------------------GTTCAAACCTCTACGACT---------------------------------------------------------------------------------------------------------------------------A--CAGTGATGCCTGCCCAGTGTGCCACCAACTG-----------------------------------------------------GCAGATGCAGC------AGCA----------G---CAGATGCAG---CAAC---CT---ATGAATCAGCAGATGC---A---GCAGCAG----------------------CC--------CATGCCCATGCCCA---------TG---CAGA------TGCAGCAGCCT--------------------------------------CAG---------------------------------------------------GT-----G---------ATGTCCGCCTTGCCACCAAAGTACGATCAGGTGG--------T
droFic1 scf7180000453901:661443-661649 + CAGCAGAGC-------GGCTA----------------------------------------------------------------------------------------------------------------------------CTACAT-------------CGACGGG--------------------------------------------CCC------------------AGCACCTCGGCGGCGGCCTATGC--------------------------------------------------------C-TATAATC---AGTCTCTGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACCAGCAGCAG-------------------CAACAA---CAGC---AGCAACAACAGCAGC---AAC---A---GCAGCAACA----------------------A-----CAGCAGCAACAGGTG---------------CAGTACGACCAGCA---GC---AGGAGTTGCA------G----TACGATCCGCACC----AGAATAT---------------------------------------------------------------------GCAGTTCGATCAA---------------TATCAGCAA
droEle1 scf7180000491011:1680955-1681137 - TGAGG--------------CGGTGGAGGAGCAGGGGTCAAGG--GTCACCGAAAGTTTGCTGCAGTTGTTG--------CGACGC----------------------------------------------AAACGAAACAACAATGACAA-------------CA---------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------CAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACAA-------------------CAACAACAACAACAACAACAACAACA---AC---AAC---A---ACAACAACA-------------ACAACAACAACAACA--------------------------A---CAAC------AACAACAAC---A-----------------------------------ACAA------------------------------------------------------------------------------------------------------------CAA
droRho1 scf7180000777097:475283-475468 - CCATCG--TGATGATGAAG-----------------------------------------------------ATGGCGCCATCG------------------------------------------------------------------------------------------------------------C--CTC-TCCATTCAGCGTGCAA-GC------------------GGAACAA-----------------------------------------------------------AAGCAGCAGCAAC---ACTATC---AACATCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCAGCAACAG-------------------CAACAC---CAGC---AACAGCAACACCAGC---AAC---A---GCAACAG----------------------CAA-----CACCAGCAACAGCAACA---------G---CAAC------AGCAACAAC---AGCAGCAACC---------------------------------------------------------------------------------AT-----------AAA-------------------------------------------C
droBia1 scf7180000302035:146969-147158 + GC--AGGAC-------GTGCA-----------------GGAG-----------------------------AGTGGTGCTGGCGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCCGTGCCAGAGGGGC-----------------AGTTCGCCACTC----------------------------TG-------------------------------CCAAGACACACAGCCAGGAGGGGCATCCTCAAGAAGGACTCCTCCTTGCAGCA---ACAGCAGC------AGC----------------------------------AGCAGCAACATCAGC---AGC---A---GCA-------------------------ACAGCAG--CTCCAGCAGCAGCACCA---------G---CAAC------TCCAGCAGC---A-----------------------------------------------------------------------------------------------------------------------------------------------------G
droTak1 scf7180000414393:40431-40656 - CGGTCAATG-------GAG-----------------------------------------------------GAGGCAGTGGCTCC-------------------------------------------AA--------------CTCCGCC---------------------------------------------------C-------------------------------------------AGCGGTCCAAC-CTGCTGGTCAATAGCGCTCTAACCAACACAGTG------------------------G------------CTGCTGCGGCA-------------------GCCGCGGCAGCTGCTGCAGTGGCC-----AGC-------------------------------------------------------------------------------------------------AACACGTTGCAGCA---ACATCAGC------AGCA----------CCAC------------CAG---------CAACAGCAGC---AGC---A---GCA---ACAGCAGCA-------GCAGCAGCAACAACA-----------------GCAGCAACAG---CAGCAG---CAGCA---ACAT-----T----CACCG-----------------------------------------------------------------------------------------------------C----------------------------------A
droEug1 scf7180000408900:123347-123606 - AGAGAAATG-------GAGGT-----------------GGAA-----------------------------AGTGG------AGACTGCCATTTCCAGTGTGTATTTA------------GCAA-----------------------AATGTTTT----------------GTTGCTGTTGTAGTTTAGTTTTCCCACTTCCAGGCAGCAGTCAA------------------------------------------C---------------------------------------------------------------------TG------CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACTGCAAC------AGCA----------ACAA---CAACAA---CAAC---AA------------------C---T---ACAACAACAGCAATAGCAACA-------GCAA---ACTAACA--------AC---------CTG---CAACAC---CAACA---ATCT-----G----C--------------AACCTG----CAACAACAAAAGGGACTCAAAACTCAACACAGAGCT----------------------------------------------------------TTTCGAACAGCC-TCAG-TGCCT
dm3 chr3R:27486623-27486821 + GC--AGGAC-------GTACA-----------------GGAG-----------------------------AGTGGTGCTGGTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCCGTGCCCGAGGGTC-----------------AGTTTGCCACTC----------------------------TG-------------------------------CCGAGACACACAGCCCGGAGAGGTATTCTCAAGAAGGACACCTCCTTGCAGCA---ACAGCAGC------AGCA----------GCAC------CAG---CAGCAGCATCAACATCA---AC---AGC---A---GCAGCAG-------------------CAACAGCAGAT-----------------ACAGCAGCAG---CAGCAC---CAGCA---G-----------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:19254120-19254291 - ATGTCAGTG-------GGGCGGT---------------GGTG-----------------------------GGTGGTGGTGGGCCG-------------------------------------------AG--------------CTACGGCCTT----------------GGGGCCAACACA-----------------------------------------------------------------GTGGCATATGC--------------------------------------------------------C-CACAACCAACTG------CTGCA-------------------GTA--------------------------------------------------------------------------------------------------------------------------------------------TCAACAACAAC------AGC----------------------------------AACAACAACAACAGC---------AGCAGCAACA----------------------ACAG---CA-----------------GCAGCAACAG---CAGCACCACCAGCATCT---------------TCCG-----CA-----------GC--------------------------------------------------------------------------------------------------------------------A
droSec2 scaffold_5:1707715-1707938 - CTGCTGATG-------G-CAC-----------------ATG------------------------------CGCTTGGGAGGGCTG------------------CTTTTCGGGATTGGGACTGGGATGC--GG-----------------------------------------------------------------------------------GC------------------TGGACTCCA-----------------------------------------------------------GCGATGGCTGCC-TGCCATC---AGCGGCAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC------AGCA----------G---CAGCTACAG---CAGC---AGCAACGGCAACGGC---AGC---A---GCAGCAA----------------------CTACGGCA-----------------GCAACATCGG---CAGCAG---CAGCA---ACACCA---------ACAATATCCCA-----------GG----------------------C-------------TTGCGACCGTCAGGCCAAC---------G---------GTTTCCG-----------------------------------C
droYak3 X:6861315-6861513 - CCGCCCCAGGGCTATGGTG-----------------------------------------------------TGGGCGTGAGCTCG----------------------------------------------------------------CC---CTACGCACG-------------------------------CTC-GCCATTCGGCGGGGTG-GT------------------GGAGCAG---------------------------------------------------------------------------------------------------------------------CCCCAGG---------------------TGCTGAGCACGC------------------------------GCCAAA-------------TCGTGATGCACG----------------------ACTACATCACCTCGCAGCA---GATGCAGG------GAC-------------------------------------------AGCAGC---AGCAACA------ACAG-------------------CAG--------CAACAGCAACAGCA---GCA------G---CAACAG---CAGCA---AC---A---------------GCGCA-----------AC--------------------------------------------------------------------------------------------------------------------A
droEre2 scaffold_4820:487713-487953 - ATGCAGGAC-------GTGCA-----------------GGAG-----------------------------AGTGGTGCTGGTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCCGTGCCCGAGGGTC-----------------AGTTTGCCACTC----------------------------TA-------------------------------CCGAGACACACGGCCCGGAGAGGTATTCTCAAGAAGGACACCTCCTTGCAGCA---GCAGC---------AG-------------------CAAATT---CAGC---AGCAGCATCAGCAGC---AAC---A---GCAACAG-------------------------CAA--ATGCAGCAGCAGCAGCA---------G---CAAC------TCCAACAGC---AGCACCAGCC----------------------------------------------------------------------------------------------------ATCCGGACTCTACACACATGATG---AAATAGT---GACCT
dp5 4_group3:1975134-1975384 - TCGCATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC------------------------A------------CAACTGTGGCA-------------------ATACCAGCAGCCACCACAGGACCC-----TGCTGCGCACACACCCACACCCAAACCA--CTGTGGTGCAGGGCCAACAGGCAGCCAACTG-----------------------------------------------------GCAGATGCAAC------AGCA----------------------------------------------GC---AGCAACA------GCAG-------------------CAACAACAGCA-----------------ACAGCATCAG---CAGCAC---CAGCA---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGCATTGCCACCAAAGTACGACCAGGCGGT---GGCCT
droPer2 scaffold_1:3448261-3448514 - TCGCATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------CAACTGTGGCA-------------------GTGCCAGCAGCCACCACAGGACCC-----TGCTGCGCCCACACCCACACCCAAACCA--CTGTGGTGCAGGGCCAACAGGCAGCCAACTG-----------------------------------------------------GCAGATGCAAC------AGCA----------------------------------------------GC---AAC---A---GCAGCAG----------------CTGCAACAGCAGCA-----------------GCAGCAGCAG---CAGCAG---CAGCA---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGCATTGCCACCAAAGTACGACCAGGCGGT---GGCCT
droWil2 scf2_1100000004521:5542709-5542924 + CCGCAACAAGAATAC---CAA-----------------ACGGAG---------------------------CACGGGGGAGGCTCA-----GGTTC--------------AGGTGGAGGAGGAGGAGGT--G---------------------------------------GTGGCACTGGCAGCGTAGTTGC--CAC-TCCAGCTGGTACACAA------------------------------------------TC--------------------------------------------------------G-CAGCGTG---AAACGC------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGATCA---ACAAT------ACCATCA----------ATAC------CAA---CAACAACAACAACACCA---AC---AAC---A---GCAGCAGCA-------------------ACAACATCA-----------------TCATCA---G---CAAT------ATCATCATC---A---------ACCG--------------------------------------------------------------------------------------------------------------------------------------CAA
droVir3 scaffold_12928:1165740-1165929 + CTGCATCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCGGCCAGTGAGGGCGACGCGGTGGCGGC---ACAGCT---GAC---------------------AAACGGCAGC-------------------------GCTGTTGC--------------------TG--CTGTGCTGCA-----------------------------------------------------------------------------GTTGCAGC---AGCAG----------------CAGCAGCAG---CAGC---AA---CAACAACAGCAGCAGC---A---GCAGCAACA------------------------------ACAGCAGCAGCAACA---------G---CAAC------AACAACAAC---AGTTGCAATC---------------------------------------------------------------------------------AT-----------CAA----------GTTCTTCCGAGA---------------------A
droMoj3 scaffold_6473:14017539-14017769 - GG-----------------------------------------------------------------------------CGGCTCG-------------------------------------------GA--------------CACCGCC---------------------------------------------------TCCGTGGAGAG-TCC------------------CGAGTATCTGCAGCGGCACAAGT-CGCAG----------------------------------------------------CTGAACAAGCAGCAGCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAAC------AGCAACAG-------------CAACAA---CAGC---AGCAGCAACAGCAGC---AAC---A---ACAACAG-------------------CAA--------CAACAGCAGCAGCAGCA------GCAA---CAGCAG---CA------GC---A---------------G-----------------------------------------------------TTGCCACCGCAACAGCAGCAGCTGCCACAGCCGC--------CGCCAGTACCACAAAAGCCGCAACA-------------G
droGri2 scaffold_8219:1130-1380 + GCGCAGCAT-------GTCAC-----------------AAGG-----------------------------CGTGACCATGGTGCC------------------CTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG------------------------G------------GAGCTGCAGTAGTCGCCGTGAATAACGGCC-----------------GCCTTC----------AG---------------TCATCAG--CTGTGGTCGCACAACAACAA----ATAATTA----------------------------------------------TGCC------ACAACAAC-------------------------------------------AGATGA------------TCC---T---CCCACAACA------------------------------------------ACA---------GATGATCG-------------------------------------------TCCCA----CAACAACAAGCTGTGCCACAAGCTCAA-ACGGCTCT-TGC-TTGGCAATCGTCCCAGGAGGCATATCCTA--------CGGCACTTCCTCCCAAGTACGCA---------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CCGCATGAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTGGTACA-------------------------------------------GG--------------CTCCCCC---------------------------------------------------TTCCGGGTGTGG-GC------------------CAAGGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGTGGTTTCTGGCCAACCAGTGATGGATTG-----------------------------------------------------GCAACAGCAAC------AGCAACTCCAACAA-------CAAC------------AGCAGT------------ACC---A---ACAGCAACAACAGTACCAACAG----CAACAACAG--TACCAACCGCAACAA---------------CAGT------TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------G---------GTCTCCGCACTTCCTCCAAAATACGAACAGGCGG------TCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..GCATGAT-------GTCTA-----------------GTGG-----------------------------AGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003100020
..................CTA-----------------GTGG-----------------------------AGTGGTGGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000021
......GAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003000030
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------GTCTCCGCACTTCCTCCAAAATAC...................2513.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGTGATGGATTG-----------------------------------------------------GCAACAGC..........................................................................................................................................................................................................................................................................................................................2413.003110010
................GTCTA-----------------GTGG-----------------------------AGTGGTGGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGCAACTCCAACAA-------CAAC------------AGCA........................................................................................................................................................................................................................................................................2512.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------GTCTCCGCACTTCCTCCAAA.......................2112.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCAACAA-------CAAC------------AGCAGT------------..........................................................................................................................................................................................................................................................2112.002000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------.....................................................2112.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGT------TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------.....................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------AGCAACTCCAACAA-------CAAC------------AGCAGT------------..........................................................................................................................................................................................................................................................2611.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------CAAC------------AGCAGT------------ACC---A---ACAGCAACAACA....................................................................................................................................................................................................................................2811.001010000
....ATGAT-------GTCTA-----------------GTGG-----------------------------AGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................A-----------------GTGG-----------------------------AGTGGTGGTGGTACA-------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGTGATGGATTG-----------------------------------------------------GC................................................................................................................................................................................................................................................................................................................................1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------------------CTGTGGTTTCTGGCCAACC...................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................ACA-------------------------------------------GG--------------CTCCCCC---------------------------------------------------TTCCGGGTGTGG-GC------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................AACCTGTGGCA-------------------------------CTGTGGTTTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................................................................................ACA-------------------------------------------GG--------------CTCCCCC---------------------------------------------------TTCCGGGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTCCAACAA-------CAAC------------AGCA........................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------------CAGT------TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------.....................................................2711.001100000
..GCATGAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------------------GCAACAGCAAC------AGCAACTCC........................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................GAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....ATGAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..............................................................................GTGGTACA-------------------------------------------GG--------------CTCCCCC---------------------------------------------------TTCCGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGTACCAACAG----CAACAACA..............................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------AGCAGT------------ACC---A---ACAGCAAC........................................................................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------AGCAGT------------ACC---A---ACAGCAACAACAGT..................................................................................................................................................................................................................................2811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG--TACCAACCGCAACAA---------------C............................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAAC------AGCAACTCCAACAA-------C...........................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACCGCAACAA---------------CAGT------TCCACCAA...........................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGT------------ACC---A---ACAGCAACAACAGC..................................................................................................................................................................................................................................2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGAAAC-----------------------------------------------------G---------GTCTCCGC...................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAAC------AGCAACTCCAAC.....................................................................................................................................................................................................................................................................................................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCAAAATACGAACAGG............2011.001010000
....................A-----------------GTGG-----------------------------AGTGGTGGTGGTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------ACC---A---ACAGCAACAACAGTACCAACAG----C.....................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................ACCTGTGGCA-------------------------------CTGTGGTTTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..........................................................................GGTGGTGGTACA-------------------------------------------GG--------------CTCCCCC---------------------------------------------------TTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................CAAGGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAAAATACGAACAGGCGG------TCT2411.001000010
..............................................................................................................................................................................................................CGGGTGTGG-GC------------------CAAGGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAAC------AGCAACTCCAAC.....................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACAG----CAACAACAG--TACCAACCGCA................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--TACCAACCGCAACAA---------------CAG..........................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTCCAACAA-------CAAC------------AGC.........................................................................................................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGGCCAACCAGTGATGGATTG-----------------------------------------------------..................................................................................................................................................................................................................................................................................................................................2611.001100000
....ATGAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------.....................................................1911.001000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAAC------AGCAACTCCAACAA-------CAAC------------............................................................................................................................................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGATGGATTG-----------------------------------------------------GCAACA............................................................................................................................................................................................................................................................................................................................1911.001000010
.....TGAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGTGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--TACCAACCGCAACAA---------------CAGT------T..................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------G---------GTCTCCGCAC.................................2911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------------AACAGGAAAC-----------------------------------------------------G---------GTCTCCGCACT................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGTACCAACAG----CAACAACAG--T..........................................................................................................................................................................................................2511.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCAACCAGTGATGGAT.........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------CAGT------TCCACCAAC--------------------------------------AACAGGAAAC-----------------------------------------------------.....................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG--TACCAACCGCAAC..............................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAACCAGTGATGGATTG-----------------------------------------------------G.................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCCAACCAGTGATGGATT........................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------CAAC------------AGCAGT------------ACC---A---ACAGC...........................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG--TACCAACCGC.................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCAACAA-------CAAC------------AGCA........................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAACAA---------------CAGT------TCCACCA............................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCAACAA-------CAAC------------AGCAGT------------..........................................................................................................................................................................................................................................................2011.001000100
...............................................................................................................................................................................................................................................GGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCAACAA-------CAAC------------AGCAGT------------ACC---A---AC..............................................................................................................................................................................................................................................2711.001010000
............................................................................................................................................................................................................................................CAAGGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGT..................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAAAATACGAACAGGC...........2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------GTCTCCGCACTTCCTCCAAAATACG..................2611.001100000
............................................................................................................................................................................................................................................CAAGGAA-------------------------------------------------------------------------------------------------------------------------------------AACCTGTGGCA-------------------------------CTGTG.................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCAACCAGTGATGG...........................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......GAT-------GTCTA-----------------GTGG-----------------------------AGTGGTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACAA-------CAAC------------AGCAGT------------ACC---A---AC..............................................................................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC-----------------------------------------------------G---------GTCTCCGCACTTCCTCCAAAATAC...................2911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG--TACCAACCGCAACAA---------------C............................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACC---A---ACAGCAACAACAGTAC................................................................................................................................................................................................................................2020.501010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAAC------AGCAACTCCA.......................................................................................................................................................................................................................................................................................................2020.501100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------ACC---A---ACAGCAACAACAGTACC...............................................................................................................................................................................................................................2320.501010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACAG----CAACAACAG--TAC........................................................................................................................................................................................................2020.501010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAACAG----CAACAACAG--TACC.......................................................................................................................................................................................................2320.501010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC------AGCAACTCCAAC.....................................................................................................................................................................................................................................................................................................1920.501010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------------------GCAACAGCAAC------AGCAACT..........................................................................................................................................................................................................................................................................................................1950.402110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAAC------AGCAACTCC........................................................................................................................................................................................................................................................................................................2030.331010000
droBip1
CCGCCTGAT-------GTCTC-----------------GTGG-----------------------------CGTTGTGGTGGTCCA-------------------------------------------AA--------------ATCCAAC---------------------------------------------------TTCAGGGTGTG-TTTCTGCTCAAGTGGCC-----------------------ATG-CCGCCAGGTAGAGGCGCCATAACCACAACGGCC---------------------------------------------------------------------------------------------------------------------------A--ATGTGGTTCCAGCCCAAACAGCGAATAATTG-----------------------------------------------------GCAACAGCAAC------AGCAGTTCCAACAA-------CAAC------------AGCAAT------------TCC---A---ACAGCAACA-------------ACAATTCCAACAACC-----------------A------------CCAT------TCCAACAAC--------------------------------------AACAGCAAAT-----------------------------------------------------G---------GCATCCGCACTTCCTCCAAAATACGAACAGGCCATAGCCGCCCSizeHit CountTotal NormTotal
No Reads
droKik1
CAGGATGAT-------GGCCA-----------------GGGG-----------------------------CATTGTGGTTGTGCC------------------AC----------------------------------------------------------------------------------------------------------------------AGGTGGCCACGCCT------------------------------------GTTCAAACCTCTACGACT---------------------------------------------------------------------------------------------------------------------------A--CAGTGATGCCTGCCCAGTGTGCCACCAACTG-----------------------------------------------------GCAGATGCAGC------AGCA----------G---CAGATGCAG---CAAC---CT---ATGAATCAGCAGATGC---A---GCAGCAG----------------------CC--------CATGCCCATGCCCA---------TG---CAGA------TGCAGCAGCCT--------------------------------------CAG---------------------------------------------------GT-----G---------ATGTCCGCCTTGCCACCAAAGTACGATCAGGTGG--------TSizeHit CountTotal NormTotal
No Reads
droFic1
CAGCAGAGC-------GGCTA----------------------------------------------------------------------------------------------------------------------------CTACAT-------------CGACGGG--------------------------------------------CCC------------------AGCACCTCGGCGGCGGCCTATGC--------------------------------------------------------C-TATAATC---AGTCTCTGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACCAGCAGCAG-------------------CAACAA---CAGC---AGCAACAACAGCAGC---AAC---A---GCAGCAACA----------------------A-----CAGCAGCAACAGGTG---------------CAGTACGACCAGCA---GC---AGGAGTTGCA------G----TACGATCCGCACC----AGAATAT---------------------------------------------------------------------GCAGTTCGATCAA---------------TATCAGCAASizeHit CountTotal NormTotal
No Reads
droEle1
TGAGG--------------CGGTGGAGGAGCAGGGGTCAAGG--GTCACCGAAAGTTTGCTGCAGTTGTTG--------CGACGC----------------------------------------------AAACGAAACAACAATGACAA-------------CA---------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------CAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACAA-------------------CAACAACAACAACAACAACAACAACA---AC---AAC---A---ACAACAACA-------------ACAACAACAACAACA--------------------------A---CAAC------AACAACAAC---A-----------------------------------ACAA------------------------------------------------------------------------------------------------------------CAASizeHit CountTotal NormTotal
No Reads
droRho1
CCATCG--TGATGATGAAG-----------------------------------------------------ATGGCGCCATCG------------------------------------------------------------------------------------------------------------C--CTC-TCCATTCAGCGTGCAA-GC------------------GGAACAA-----------------------------------------------------------AAGCAGCAGCAAC---ACTATC---AACATCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCAGCAACAG-------------------CAACAC---CAGC---AACAGCAACACCAGC---AAC---A---GCAACAG----------------------CAA-----CACCAGCAACAGCAACA---------G---CAAC------AGCAACAAC---AGCAGCAACC---------------------------------------------------------------------------------AT-----------AAA-------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droBia1
GC--AGGAC-------GTGCA-----------------GGAG-----------------------------AGTGGTGCTGGCGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCCGTGCCAGAGGGGC-----------------AGTTCGCCACTC----------------------------TG-------------------------------CCAAGACACACAGCCAGGAGGGGCATCCTCAAGAAGGACTCCTCCTTGCAGCA---ACAGCAGC------AGC----------------------------------AGCAGCAACATCAGC---AGC---A---GCA-------------------------ACAGCAG--CTCCAGCAGCAGCACCA---------G---CAAC------TCCAGCAGC---A-----------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
CGGTCAATG-------GAG-----------------------------------------------------GAGGCAGTGGCTCC-------------------------------------------AA--------------CTCCGCC---------------------------------------------------C-------------------------------------------AGCGGTCCAAC-CTGCTGGTCAATAGCGCTCTAACCAACACAGTG------------------------G------------CTGCTGCGGCA-------------------GCCGCGGCAGCTGCTGCAGTGGCC-----AGC-------------------------------------------------------------------------------------------------AACACGTTGCAGCA---ACATCAGC------AGCA----------CCAC------------CAG---------CAACAGCAGC---AGC---A---GCA---ACAGCAGCA-------GCAGCAGCAACAACA-----------------GCAGCAACAG---CAGCAG---CAGCA---ACAT-----T----CACCG-----------------------------------------------------------------------------------------------------C----------------------------------ASizeHit CountTotal NormTotal
No Reads
droEug1
AGAGAAATG-------GAGGT-----------------GGAA-----------------------------AGTGG------AGACTGCCATTTCCAGTGTGTATTTA------------GCAA-----------------------AATGTTTT----------------GTTGCTGTTGTAGTTTAGTTTTCCCACTTCCAGGCAGCAGTCAA------------------------------------------C---------------------------------------------------------------------TG------CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACTGCAAC------AGCA----------ACAA---CAACAA---CAAC---AA------------------C---T---ACAACAACAGCAATAGCAACA-------GCAA---ACTAACA--------AC---------CTG---CAACAC---CAACA---ATCT-----G----C--------------AACCTG----CAACAACAAAAGGGACTCAAAACTCAACACAGAGCT----------------------------------------------------------TTTCGAACAGCC-TCAG-TGCCTSizeHit CountTotal NormTotal
No Reads
dm3
GC--AGGAC-------GTACA-----------------GGAG-----------------------------AGTGGTGCTGGTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCCGTGCCCGAGGGTC-----------------AGTTTGCCACTC----------------------------TG-------------------------------CCGAGACACACAGCCCGGAGAGGTATTCTCAAGAAGGACACCTCCTTGCAGCA---ACAGCAGC------AGCA----------GCAC------CAG---CAGCAGCATCAACATCA---AC---AGC---A---GCAGCAG-------------------CAACAGCAGAT-----------------ACAGCAGCAG---CAGCAC---CAGCA---G-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................TACA-----------------GGAG-----------------------------AGTGGTGCTGGTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
.................TACA-----------------GGAG-----------------------------AGTGGTGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGACACCTCCTTGCAGCA---ACA............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-------------------CAACAGCAGAT-----------------ACA.......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-------------------CAACAGCAGAT-----------------ACAGCAGCA.................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCA---AC---AGC---A---GCAGCAG-------------------......................................................................................................................................................................................................................1980.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---AC---AGC---A---GCAGCAG-------------------CAACA.................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCAGC------AGCA----------GCAC------CAG---CA.................................................................................................................................................................................................................................................................................22110.1820000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---AC---AGC---A---GCAGCAG-------------------CAAC..................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---AC---AGC---A---GCAGCAG-------------------CAA...................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---ACAGCAGC------AGCA----------GCA................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---AC---AGC---A---GCAGCAG-------------------C.....................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCA---AC---AGC---A---GCAGCAG-------------------C.....................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCA---ACAGCAGC------AGCA----------G..................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCA---AC---AGC---A---GCAGCAG-------------------CA....................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCA---ACAGCAGC------AGCA----------GC.................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA---ACAGCAGC------AGCA----------GCAC------.........................................................................................................................................................................................................................................................................................2290.1110000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ACAGCAGC------AGCA----------GCA................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ACAGCAGC------AGCA----------GCAC------C........................................................................................................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---ACAGCAGC------AGCA----------GCAC------.........................................................................................................................................................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCA---AC---AGC---A---GCAGCAG-------------------CC....................................................................................................................................................................................................................23120.0810000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAGCAGC------AGCA----------GCAC------.........................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCA---AC---AGC---A---GCAGC...........................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------AGCA----------GCAC------CAG---CAGCAG.............................................................................................................................................................................................................................................................................21170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCA---AC---AGC---A---GCAGCAG-------------------CA....................................................................................................................................................................................................................20170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCA---AC---AGC---A---GCAGCAG-------------------C.....................................................................................................................................................................................................................19180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---AC---AGC---A---GCAGCAG-------------------CAACAG................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCA---ACAGCAGC------AGCA----------GCA................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAGCAGC------AGCA----------GCAC------CA.......................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC------AGCA----------GCAC------CA.......................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AC---AGC---A---GCAGCAG-------------------CAACA.................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AC---AGC---A---GCAGCAG-------------------CAACAGCA..............................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGC---A---GCAGCAG-------------------CAACAGC...............................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------AGCA----------GCAC------CAG---...................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCA----------GCAC------CAG---CAGCAGCA...........................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAGCAGC------AGCA----------GCA................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCA----------GCAC------CAG---CAGCAGCA...........................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCAGC------AGCA----------GCAC------CA.......................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---A---GCAGCAG-------------------CAACAGCAG.............................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG---CAGCAC---CAG.................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---AC---AGC---A---GCAGCAG-------------------CA....................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---ACAGCAGC------AGCA----------GC.................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
ATGTCAGTG-------GGGCGGT---------------GGTG-----------------------------GGTGGTGGTGGGCCG-------------------------------------------AG--------------CTACGGCCTT----------------GGGGCCAACACA-----------------------------------------------------------------GTGGCATATGC--------------------------------------------------------C-CACAACCAACTG------CTGCA-------------------GTA--------------------------------------------------------------------------------------------------------------------------------------------TCAACAACAAC------AGC----------------------------------AACAACAACAACAGC---------AGCAGCAACA----------------------ACAG---CA-----------------GCAGCAACAG---CAGCACCACCAGCATCT---------------TCCG-----CA-----------GC--------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGC---------AGCAGCAAC...........................................................................................................................................................................................................................................20202.6052000005200000000000
....................GGT---------------GGTG-----------------------------GGTGGTGGTGGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.......TG-------GGGCGGT---------------GGTG-----------------------------GGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000001000
.......TG-------GGGCGGT---------------GGTG-----------------------------GGTGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.....................GT---------------GGTG-----------------------------GGTGGTGGTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.86600000600000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------------ACAG---CA-----------------GCAGCAACAG---CAGC.........................................................................................................................................................................23180.06100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGC---------AGCAGCAACA----------------------....................................................................................................................................................................................................................23200.05100000001000000000
droSec2
CTGCTGATG-------G-CAC-----------------ATG------------------------------CGCTTGGGAGGGCTG------------------CTTTTCGGGATTGGGACTGGGATGC--GG-----------------------------------------------------------------------------------GC------------------TGGACTCCA-----------------------------------------------------------GCGATGGCTGCC-TGCCATC---AGCGGCAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC------AGCA----------G---CAGCTACAG---CAGC---AGCAACGGCAACGGC---AGC---A---GCAGCAA----------------------CTACGGCA-----------------GCAACATCGG---CAGCAG---CAGCA---ACACCA---------ACAATATCCCA-----------GG----------------------C-------------TTGCGACCGTCAGGCCAAC---------G---------GTTTCCG-----------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................CTTGGGAGGGCTG------------------CTTTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
droYak3
CCGCCCCAGGGCTATGGTG-----------------------------------------------------TGGGCGTGAGCTCG----------------------------------------------------------------CC---CTACGCACG-------------------------------CTC-GCCATTCGGCGGGGTG-GT------------------GGAGCAG---------------------------------------------------------------------------------------------------------------------CCCCAGG---------------------TGCTGAGCACGC------------------------------GCCAAA-------------TCGTGATGCACG----------------------ACTACATCACCTCGCAGCA---GATGCAGG------GAC-------------------------------------------AGCAGC---AGCAACA------ACAG-------------------CAG--------CAACAGCAACAGCA---GCA------G---CAACAG---CAGCA---AC---A---------------GCGCA-----------AC--------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCAGCA---GATGCAGG------GAC-------------------------------------------...................................................................................................................................................................................................................................................................2011.00101000000000
..GCCCCAGGGCTATGGTG-----------------------------------------------------TGGGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...............GGTG-----------------------------------------------------TGGGCGTGAGCTCG----------------------------------------------------------------CC---CT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGG------GAC-------------------------------------------AGCAGC---AGCAACA------A............................................................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---GATGCAGG------GAC-------------------------------------------AGCAGC---AG........................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACG----------------------ACTACATCACCTCGCAGGG---C..............................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCTCGCAGCA---GATGC..........................................................................................................................................................................................................................................................................................................................1911.00100010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGG------GAC-------------------------------------------AGCAGC---AGCAACA------ACA..........................................................................................................................................................................................................................................2311.00100000010000
..............................................................................................................................................................CGCACG-------------------------------CTC-GCCATTCGGCGGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAGG------GAC-------------------------------------------AGCAGC---AGC.......................................................................................................................................................................................................................................................2011.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------CAACAGCAACAGCA---GCA------G---C............................................................................................................................................................................21200.10202000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCA---GCA------G---CAACAG---CA..................................................................................................................................................................25190.05101000000000
droEre2
ATGCAGGAC-------GTGCA-----------------GGAG-----------------------------AGTGGTGCTGGTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCCGTGCCCGAGGGTC-----------------AGTTTGCCACTC----------------------------TA-------------------------------CCGAGACACACGGCCCGGAGAGGTATTCTCAAGAAGGACACCTCCTTGCAGCA---GCAGC---------AG-------------------CAAATT---CAGC---AGCAGCATCAGCAGC---AAC---A---GCAACAG-------------------------CAA--ATGCAGCAGCAGCAGCA---------G---CAAC------TCCAACAGC---AGCACCAGCC----------------------------------------------------------------------------------------------------ATCCGGACTCTACACACATGATG---AAATAGT---GACCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------G---CAAC------TCCAACAGC---AGC....................................................................................................................................................1860.1711000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAGCATCAGCAGC---AA........................................................................................................................................................................................................................................................19200.0510000010
dp5
TCGCATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC------------------------A------------CAACTGTGGCA-------------------ATACCAGCAGCCACCACAGGACCC-----TGCTGCGCACACACCCACACCCAAACCA--CTGTGGTGCAGGGCCAACAGGCAGCCAACTG-----------------------------------------------------GCAGATGCAAC------AGCA----------------------------------------------GC---AGCAACA------GCAG-------------------CAACAACAGCA-----------------ACAGCATCAG---CAGCAC---CAGCA---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGCATTGCCACCAAAGTACGACCAGGCGGT---GGCCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACAGGCAGCCAACTG-----------------------------------------------------GCAGAT............................................................................................................................................................................................................................................................................................................................2612.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCT.....................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGC...................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CA--CTGTGGTGCAGGGCCA......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAACTG-----------------------------------------------------GCAGATGCAAC------AGCA----------------------------------------------GC---A.........................................................................................................................................................................................................................................................2711.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................CCACAGGACCC-----TGCTGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTACGACCAGGCGGT---G....2011.0010100000000
....ATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGCCACCAAAGTACGACC...............2211.0010100000000
....ATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGCCAACAGGCAGCCAACTG-----------------------------------------------------GCA...............................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTG....................................2111.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------------CAACAACAGCA-----------------ACAGCATCAG---CAGC.........................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ACCA--CTGTGGTGCAGGGCCAACAGGC................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-----------------ACAGCATCAG---CAGCAC---CAGC................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------ACAGCATCAG---CAGCAC---CAGC................................................................................................................................................................2130.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA-----------------ACAGCATCAG---CAGCA........................................................................................................................................................................19150.0710100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAG---CAGCAC---CAGC................................................................................................................................................................18160.0610100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGCA----------------------------------------------GC---AGCAACA------GCAG-------------------CA....................................................................................................................................................................................................................22200.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------GCAG-------------------CAACAACAGCA-----------------AC........................................................................................................................................................................................22200.0510000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA----------------------------------------------GC---AGCAACA------GCAG-------------------CAAC..................................................................................................................................................................................................................20200.0510000010000
droPer2
TCGCATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------CAACTGTGGCA-------------------GTGCCAGCAGCCACCACAGGACCC-----TGCTGCGCCCACACCCACACCCAAACCA--CTGTGGTGCAGGGCCAACAGGCAGCCAACTG-----------------------------------------------------GCAGATGCAAC------AGCA----------------------------------------------GC---AAC---A---GCAGCAG----------------CTGCAACAGCAGCA-----------------GCAGCAGCAG---CAGCAG---CAGCA---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGCATTGCCACCAAAGTACGACCAGGCGGT---GGCCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................CA--CTGTGGTGCAGGGCCAACA...................................................................................................................................................................................................................................................................................................................................................................................................2112.002010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGC...................................2512.002110000
......................................................................................................................................................................................................................................................................................................................................................................................ACAGGACCC-----TGCTGCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002110000
...........................................................................GTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------CAACTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................................................ATCGTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
................GCGCA-----------------GGAA-----------------------------TATCGTAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATAT-----G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGCA..................................2611.001001000
....ATGAT-------GCGCA-----------------GGAA-----------------------------TATCGTAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTACGACCAGGCGGT---.....1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCAGGGCCAACAGGC................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................................GAA-----------------------------TATCGTAGTGGTGCC------------------AAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGCCAACTG-----------------------------------------------------GCAGATGC..........................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................GCCAGCAGCCACCACAGGACCC-----....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTCTCTGCATTGCCACC..........................2111.001010000
.........................................A-----------------------------TATCGTAGTGGTGCC------------------AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................................................................................................................................................................................................................................................................................................................................................................AGGACCC-----TGCTGCGCCCACACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................A--CTGTGGTGCAGGGCCAACA...................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAACTG-----------------------------------------------------GCAGATGCAAC------AGCA----------------------------------------------...............................................................................................................................................................................................................................................................2411.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----CACCG-----------------------------------------------------------------------------AT-----------GAACGTCTCTGCA..................................2111.001010000
........................................................................................................AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------------------------A------------CAACTGTGGCA-------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGCA----------------------------------------------GC---AAC---A---GCAGCAG----------------C........................................................................................................................................................................................................................21200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------GC---AAC---A---GCAGCAG----------------CT.......................................................................................................................................................................................................................19200.051010000
droWil2
CCGCAACAAGAATAC---CAA-----------------ACGGAG---------------------------CACGGGGGAGGCTCA-----GGTTC--------------AGGTGGAGGAGGAGGAGGT--G---------------------------------------GTGGCACTGGCAGCGTAGTTGC--CAC-TCCAGCTGGTACACAA------------------------------------------TC--------------------------------------------------------G-CAGCGTG---AAACGC------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGATCA---ACAAT------ACCATCA----------ATAC------CAA---CAACAACAACAACACCA---AC---AAC---A---GCAGCAGCA-------------------ACAACATCA-----------------TCATCA---G---CAAT------ATCATCATC---A---------ACCG--------------------------------------------------------------------------------------------------------------------------------------CAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................AGGAGGT--G---------------------------------------GTGGCACTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................GGTGGAGGAGGAGGAGGT--G---------------------------------------GTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100100
...............................................................................................................GGTGGAGGAGGAGGAGGT--G---------------------------------------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010
...................................................................................................................GAGGAGGAGGAGGT--G---------------------------------------GTGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCA---AC---AAC---A---GCAGCAGCA-------------------AC..................................................................................................................................................................................................................2160.17100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------CAA---CAACAACAACAACACCA---A..............................................................................................................................................................................................................................................................2360.17101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------ACAACATCA-----------------TCATCA---G---CA...........................................................................................................................................................................19100.10100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACACCA---AC---AAC---A---GT..............................................................................................................................................................................................................................................20200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAGCA-------------------ACAACATCA-----------------..........................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---A---GCAGCAGCA-------------------ACAAC...............................................................................................................................................................................................................18200.05101000
droVir3
CTGCATCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCGGCCAGTGAGGGCGACGCGGTGGCGGC---ACAGCT---GAC---------------------AAACGGCAGC-------------------------GCTGTTGC--------------------TG--CTGTGCTGCA-----------------------------------------------------------------------------GTTGCAGC---AGCAG----------------CAGCAGCAG---CAGC---AA---CAACAACAGCAGCAGC---A---GCAGCAACA------------------------------ACAGCAGCAGCAACA---------G---CAAC------AACAACAAC---AGTTGCAATC---------------------------------------------------------------------------------AT-----------CAA----------GTTCTTCCGAGA---------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AGTTGCAATC---------------------------------------------------------------------------------AT-----------CAA----------GT................................1911.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---A---GCAGCAACA------------------------------ACA......................................................................................................................................................................................................19200.306006000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AA---CAACAACAGCAGCAGC---....................................................................................................................................................................................................................................................19200.204000000000000000000000000000002000020000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AA---CAACAACAGCAGCAGC---A---GC..............................................................................................................................................................................................................................................22200.153002000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AGCAG----------------CAGCAGCAG---C..................................................................................................................................................................................................................................................................................20200.153000300000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AA---CAACAACAGCAGCA.........................................................................................................................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACA---------G---CAAC------AAC................................................................................................................................................................21200.102000000000000000000000000000010000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAACAACAGCAGCAGC---A---................................................................................................................................................................................................................................................19200.102000000000000020000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAACA------------------------------ACAGCAGCAGCA.............................................................................................................................................................................................22200.102001000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAGCAGCAG---CAGC---AA---CAACA..................................................................................................................................................................................................................................................................23200.102000000000000000000000002000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC---A---GC..............................................................................................................................................................................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---A---GCAGCAACA------------------------------ACAGCA...................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------G---CAAC------AACAACAAC---.......................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGC---A---GCAGC...........................................................................................................................................................................................................................................21200.051000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CAGC---AA---CAACAACAGCAGCAGC---A---................................................................................................................................................................................................................................................27200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGC---AA---CAACAACAGCAGCAGC---A---................................................................................................................................................................................................................................................28200.051000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---CAGC---AA---CAACAACAGCAGCA.........................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---CAGC---AA---CAACAACAGCA............................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA---------G---CAAC------AACA...............................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC---A---GCAGCAAC........................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC---A---GCAGCAACA------------------------------AC.......................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---A---GCAGCAACA------------------------------ACAGCAGCA................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAG----------------CAGCAGCAG---CAGC---AA---CA.....................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---A---GCAGCAACA------------------------------ACAGCA...................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGC---AA---CAACAACAGCAGC..........................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAACAACAGCAGCAGC---A---GCAGCAACA------------------------------A........................................................................................................................................................................................................28200.051000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---A---GCAGCAACA------------------------------ACAGCAGC.................................................................................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------ACAGCAGCAGCAACA---------.................................................................................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC---A---GCAGCAACA------------------------------AC.......................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------ACAGCAGCAGCAACA---------G---C............................................................................................................................................................................19200.051000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGC---AA---CAACAACAGCAGCA.........................................................................................................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGC---AA---CAACAACAGCA............................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC---A---GCAGCAACA------------------------------.........................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---A---GCAGCAACA------------------------------ACAGCAGCAGC..............................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGC---A---GCAGCAACA------------------------------.........................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------------------ACAGCAGCAGCAACA---------G---CAAC------A..................................................................................................................................................................24200.051000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------ACAGCAGCAGCAACA---------G---CAAC------AA.................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AA---CAACAACAGCAGCAGC---....................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------ACAGCAGCAGCAACA---------G---CAAC------AACAA..............................................................................................................................................................26200.051000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-----------------------------------------------------------------------------GTTGCAGC---AGCAG----------------CA.............................................................................................................................................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AA---CAACAACAGCAGCAGC---A---................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGC---A---GCAGCAACA------------------------------.........................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------------------------------ACAGCAGCAGCAACA---------G---CA...........................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------ACAGCAGCAGCAACA---------G---CA...........................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------------------ACAGCAGCAGCAACA---------G---C............................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA---------G---CAAC------AAC................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---A---GCAGCAACA------------------------------ACAGCAGC.................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---A---GCAGCAACA------------------------------ACAGCAGCAGCAACA---------.................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAACA------------------------------ACAGCAGCAGCAA............................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAACAACAGCAGCAGC---A---G...............................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---CAGC---AA---CAACAACAGCAGC..........................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------ACAGCAGCAGCAACA---------G---CAA..........................................................................................................................................................................20200.051000000000000000000000000000000000000010000000000000000000000000
droMoj3
GG-----------------------------------------------------------------------------CGGCTCG-------------------------------------------GA--------------CACCGCC---------------------------------------------------TCCGTGGAGAG-TCC------------------CGAGTATCTGCAGCGGCACAAGT-CGCAG----------------------------------------------------CTGAACAAGCAGCAGCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAAC------AGCAACAG-------------CAACAA---CAGC---AGCAGCAACAGCAGC---AAC---A---ACAACAG-------------------CAA--------CAACAGCAGCAGCAGCA------GCAA---CAGCAG---CA------GC---A---------------G-----------------------------------------------------TTGCCACCGCAACAGCAGCAGCTGCCACAGCCGC--------CGCCAGTACCACAAAAGCCGCAACA-------------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................GAGTATCTGCAGCGGCACAAGA-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCA------GCAA---C............................................................................................................................................................................20200.204000040
...............................................................................................................................................................................................................................................................................................................................GAACAAGCAGCAGCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------G.................................................................................................................................................................................................................................................................................................................................1950.201100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA------GCAA---CAGCAG---CA------GC---.......................................................................................................................................................23200.102200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGC---AAC---A---ACAACA..........................................................................................................................................................................................................................................25200.102200000
.............................................................................................................................................................................................................................................................................................................................................AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAAC------AGCAACAG-------------CAA.........................................................................................................................................................................................................................................................................................26200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGC---AAC---A---ACAACAG-------------------C.....................................................................................................................................................................................................................24200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCA------GCAA---CAGCAG---CA------............................................................................................................................................................27200.051100000
....................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAAC..........................................................................................................................................................................................................................................................................................................................21200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGC---AAC---A---ACAAC...........................................................................................................................................................................................................................................19200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC------AGCAACAG-------------CAACAA---CAG................................................................................................................................................................................................................................................................................26200.051100000
.......................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAAC------AGCA.............................................................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-------------CAACAA---CAGC---AGCAGCAACAGCA...............................................................................................................................................................................................................................................................26200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG-------------------CAA--------CAACAGCAGCAG...............................................................................................................................................................................................20200.051010000
........................................................................................................................................................................................................................................................................................................................................GCAGCAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAAC------.................................................................................................................................................................................................................................................................................................................20200.051000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAGCAACAGCAGC---AAC---A---AC..............................................................................................................................................................................................................................................23200.051000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG-------------------CAA--------CAACAGCAGCAGCAGC...........................................................................................................................................................................................23200.051000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC------AGCAACAG-------------CAA.........................................................................................................................................................................................................................................................................................18200.051001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGC---AAC---A---ACAACAG-------------------CA....................................................................................................................................................................................................................28200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------CAA--------CAACAGCAGCAGCA.............................................................................................................................................................................................18200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGC---AGCAGCAACAGCAGC---AAC---....................................................................................................................................................................................................................................................24200.051000010
.............................................................................................................................................................................................................................................................................................................................................AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAACAAC------AGCAACAG-------------CAAC........................................................................................................................................................................................................................................................................................27200.051000010
droGri2
GCGCAGCAT-------GTCAC-----------------AAGG-----------------------------CGTGACCATGGTGCC------------------CTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG------------------------G------------GAGCTGCAGTAGTCGCCGTGAATAACGGCC-----------------GCCTTC----------AG---------------TCATCAG--CTGTGGTCGCACAACAACAA----ATAATTA----------------------------------------------TGCC------ACAACAAC-------------------------------------------AGATGA------------TCC---T---CCCACAACA------------------------------------------ACA---------GATGATCG-------------------------------------------TCCCA----CAACAACAAGCTGTGCCACAAGCTCAA-ACGGCTCT-TGC-TTGGCAATCGTCCCAGGAGGCATATCCTA--------CGGCACTTCCTCCCAAGTACGCA---------------CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 11:43 PM