ID:

dan_949

 Coordinate:

scaffold_12943:3980581-3980847 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-65.6 -65.5 -65.5

Flybase annnotation

exon [dana_GLEANR_407:1]; CDS [Dana\GF20820-cds]; exon [dana_GLEANR_407:2]; CDS [Dana\GF20820-cds]; intron [Dana\GF20820-in]

No Repeatable elements found

mature
  1. scaffold_9125:6989-7006 +
  2. scaffold_12916:240568-240585 +
  3. scaffold_12916:12385922-12385939 +
  4. scaffold_12929:114570-114587 +
  5. scaffold_12929:2078258-2078275 +
  6. scaffold_12943:1436564-1436581 -
  7. dan_949  scaffold_12943:3980808-3980825 -
  8. scaffold_13047:1752018-1752035 +
  9. scaffold_13117:4365780-4365797 +
  10. scaffold_13117:4381539-4381556 +
  11. scaffold_13117:4710465-4710482 -
  12. scaffold_13266:4930533-4930550 -
  13. scaffold_13334:317947-317964 +
  14. scaffold_13335:811118-811135 -
  15. scaffold_13337:12525468-12525485 -
  16. scaffold_13337:14364271-14364288 -
  17. scaffold_13337:15567890-15567907 -
  18. scaffold_13340:5295537-5295554 -
  19. scaffold_13340:13869614-13869631 +
  20. scaffold_13340:20782357-20782374 -
star

Sense Strand Reads

-----------------------------------------------###---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAACAGAGCCGCAAAGCGCGACAAAGGAAAACAAATCGCAACAAAAATGGTGAGTAATAGCCAAAAAATGACAAAAAAACAACAAAAAAAAGTGTCGAAGATCGGTGCCGCCCTGCCAGTGGCTAAAAGAAATTGGAAATTAATCCATAAAAGGGTCGGTCATTGGGGTGGAAGTGCGGGTGCCCAAAACATGCCCATATATGGCAATCGTGGCAACTGCTTACCGGTGGCCTGCCTCCCCCCACCCTCTCTCTTTGTCCGCTTATCTTCGATACAAATGACTCAAGTTAGTATGTAATGTACCGTTATCTTCCAGTCTGAGATGCAAATGGACTGTGCTTTGGATCTGATGCGTCGCCTGCCGCC
**************************************************..................(((((...................(((((((((((.((((((((((((((...)))..........((((......))))....)))).)))....(((((.((.((.(((((((((.......((((.......)))).....)))).(((((....)))))))))))))))))))...............)))).)))))))))))...((((....))))((((.....)))).))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
CCAACAGAGCCGCAAAGCGCG.......................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
..AACAGAGCCGCAAAGCGCGACAA...................................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................................................ATATGCAAATGGACTGTGC........................... 19 1 1 1.00 1 0 0 1 0 0
.CAACAGAGCCGCAAAGCGCGAC........................................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................................................GGATTGTGCTTTGGATCTGATGCGGA.......... 26 3 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................AGATGCAAATGGACTGTGCTT......................... 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................GATGCAAATGGACTGTGCT.......................... 19 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TTTGGATCTGATGCGTCGCCT...... 21 0 1 1.00 1 1 0 0 0 0
.....................................................................................................ATCGGTGCCTGCCTGCCAG....................................................................................................................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0
.................................................................................AACAAAAAAAAGTACCGAAGA......................................................................................................................................................................................................................................................................... 21 2 3 0.33 1 0 0 0 0 1
..............................................................................................................................................................................................................................................................................................................................CTGACATGCAAATCGACTGT............................. 20 2 4 0.25 1 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................TACCGTTATCTACCCGTCTT.............................................. 20 3 5 0.20 1 1 0 0 0 0
.....................................................................................................ATCGGTGCCTGCCTGCCAGA...................................................................................................................................................................................................................................................... 20 3 15 0.13 2 2 0 0 0 0
..................................................................................................AAGATCCGTGCTGCACTGCC......................................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 1 0
....................................................................ATGACAAAAAAACAAAGAAAAAAAGC................................................................................................................................................................................................................................................................................. 26 3 9 0.11 1 0 0 1 0 0
......................................................................GACAAAAAAACAACCAAAA...................................................................................................................................................................................................................................................................................... 19 1 10 0.10 1 0 0 1 0 0
....................................................................................................CATCGGTGCCTGCCTGCCAG....................................................................................................................................................................................................................................................... 20 3 20 0.10 2 2 0 0 0 0
.....................................................................TGACAAAAAAGCAACAAGAAA..................................................................................................................................................................................................................................................................................... 21 2 13 0.08 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................TCAAGTTAGCGGGTAATGT................................................................. 19 3 14 0.07 1 0 0 0 1 0
................................................................AAAAAGGACACCAAAACAACAA......................................................................................................................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 1
........................................................................CAAAAAAACAACAAAAAA..................................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 1 0 0
.......................AAAGGAAAAGATATCGCACC.................................................................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................................................TAAGGGACCGTGCTTTGG...................... 18 3 20 0.05 1 0 0 0 1 0
..................................................................................................................................AAATTGGAAATGAACCCA........................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 1 0 0
........................................................AACAGGCAAAAAATGACACA................................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

GGTTGTCTCGGCGTTTCGCGCTGTTTCCTTTTGTTTAGCGTTGTTTTTACCACTCATTATCGGTTTTTTACTGTTTTTTTGTTGTTTTTTTTCACAGCTTCTAGCCACGGCGGGACGGTCACCGATTTTCTTTAACCTTTAATTAGGTATTTTCCCAGCCAGTAACCCCACCTTCACGCCCACGGGTTTTGTACGGGTATATACCGTTAGCACCGTTGACGAATGGCCACCGGACGGAGGGGGGTGGGAGAGAGAAACAGGCGAATAGAAGCTATGTTTACTGAGTTCAATCATACATTACATGGCAATAGAAGGTCAGACTCTACGTTTACCTGACACGAAACCTAGACTACGCAGCGGACGGCGG
**************************************************..................(((((...................(((((((((((.((((((((((((((...)))..........((((......))))....)))).)))....(((((.((.((.(((((((((.......((((.......)))).....)))).(((((....)))))))))))))))))))...............)))).)))))))))))...((((....))))((((.....)))).))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V055
head
 V105
male body		 V039
embryo
 M058
embryo
 V106
head
..........................................................................................................TCGGCGGGACGTTCACCGAT................................................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................CTCGGCGGGACGTTCACCAAT................................................................................................................................................................................................................................................. 21 3 2 1.00 2 2 0 0 0 0 0
.................................................................................................................................................................................................CGGGCATAGACGGTTAGCAC.......................................................................................................................................................... 20 3 4 0.75 3 1 0 2 0 0 0
.................................................................................................................................................................................................CGGGCATAGACGGTTAGCACC......................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................ACCGAAACAGGCGAATGGAAG................................................................................................ 21 3 3 0.33 1 0 1 0 0 0 0
.....................................................................................................TAGCCACGGACGGACGGTC....................................................................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 1 0
...........................................TTTTTACCACTCAGGATCGC................................................................................................................................................................................................................................................................................................................ 20 3 3 0.33 1 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................ATGGCATTAGAAGCTCAG................................................ 18 2 4 0.25 1 0 1 0 0 0 0
............................................................................................................GGCGGGACGTTCACCAAT................................................................................................................................................................................................................................................. 18 2 5 0.20 1 1 0 0 0 0 0
.....................................................................................................................................................................................ATGGGTCTTGTACGGGTA........................................................................................................................................................................ 18 2 6 0.17 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................GAGGGGGGTGGGAGGGA.................................................................................................................. 17 1 8 0.13 1 0 1 0 0 0 0
.................................................................................................................................................................................................CGGGCATAGACGGTTAGCA........................................................................................................................................................... 19 3 9 0.11 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................................ATGTAGGGGGGTGGGAGA.................................................................................................................... 18 2 13 0.08 1 0 0 0 1 0 0
.....................................................................................................TAGCCACGGACGGACGGTCT...................................................................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 1
............................................................................................................................................................................................................................................................AGCAACAGGCGAAGAGAAG................................................................................................ 19 2 19 0.05 1 0 0 0 0 1 0
................................................ACCTCTCATTCTCGGTTTTA........................................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1 0 0
....................................................................................................GTAGCCACGGACGGACGGTC....................................................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:3980531-3980897 - dan_949 CCA-----ACAGAGCCGC--AAAGCGCGACAA-AGGAAAACAA---ATCGCAACAAAAATGGTGAGTAATAGCCAAA-----AAATGAC---------------------AAAA--AAACAA------CAAAAAAAAGTG-----T-CGA----A-GATCGGT---GCCGCCCTGCC-A---GT-G--GCT----------------------------AAAAG--------AAAT--TGGAAA-----T--------------TAAT----------------------------------C--CA-TA-AAAGGGTCG---GTC-ATTGGGGTGG-------------------AAGTGCGGGTGCCCAAAA-CATGCCCATATATGGCAATCGT----------------GGCAA------CTGCTTACCGGTGGCCTGCCTCCCCCCACCCTCTCT---------------------------------------------------CTTT------------------GTCC---GCTTATCTTC----GA---TAC--AAATGACTCAAGTTAGTA-------------T--GTA-------------------ATGTAC------C----------GT-------TA-----------------T-CTTCCAGTCTGAGATGCAAATGGACTGTGCTTTGGATCTGATGCGTCGCCTGCCGCC
droBip1 scf7180000395973:201937-202296 - GAAA-----AAGAGC-AG-CACAGCGTGACAA-AGGAAAACAA---ATCGCAACCAAAATGGTGAGTAATAGCCAAAA----AAATGAC---------------------AAAACAACA----------AAAAAAAGGTG-----T-CGA----A-GATCGGT---GCCGCCCTTGT-A---GT-G--GCT----------------------------AAAAG--------AAAT--TGGAAA-----T--------------TAAT----------------------------------C--CC-TA-AAAAGGTCG---GTC-ACCAGGGTGG-------------------CAGTGCGGGACCCA-AAA-CATGCCCATATATGGCAATCGT----------------GGCAA------CTGCTTACCGGTGGC-TGCCTCCC-----CCTCTCC---------------------------------------------------CTTT-----------------GTCAC---CCTTATCTTC----GA---TAC--GAATGACTCAAGTTAGTA-------------T--TTA-------------------ATGTAC------C----------GT-------TA-----------------T-CTTTCAGTCTGAGATGCAAATGGACTGTGCTTTGGATCTGATGCGTCGCCTGCCGCC
droKik1 scf7180000302643:823881-824298 - CCG---------ATTAAA-CCAAGTGAAACAA-AGGC---CCG--AAAGAGA-TCAAAATGGTGAGTAATAGTTCGG------------------------------------------AAAAA-GGCCAACAAACGGTGAATA-G-ATC----T-AAAAGGAGCCGCCGCCCCATG-A---TTAA--GTG-------AAAAGTAGAGAGATTTAGTATACAAGTTAAGAAGT-----T---------CTGTTGGCAGAAGGGGAAAG----------------------------------A--GA-A--------------------------------------------------AGAAGGGCCTAAAAC-AATGCCCATATAAGGCAATACCG--G-TCTTAC--------ACCCTCCTCCTCCCCGTGCTCTCTC-------------------------CTC---------ACTCCTCTTCTCTCCCAC-AAACTGGGGGATTTTA-GGGTATTTCTTTTTTGG-GGCTC--CTCTTATCGC----------CGCTCAAGTGACTCAACTTGCTT-------------T--T-----------------------------------------------------TC-CCTTCCTCATTCCCA-TCTCCACAGTCGGAAATGCAAATGGACTGCGCCTTGGACCTGATGCGTCGCCTGCCGCC
droFic1 scf7180000453949:455956-456317 - A--------CAGTAAAAACCCCATCTAAACAAAGGGAAAGCA----AAAGTA-TCAAAATGGTGAGTAATAGTATAT-G-AATGGTAAC---------------------AGAA-AAAAAAACA-GGCCAACAAACGGTG-----T-TTT----TGTATCGGT---GTCGCCCATGC-T---G-AA--GTA----------------------------AAACT--------AAGT--TTTATAATCA------------------TA----------------------------------T--TAAAAGGAAAATACT---TTTGATAGGGGCGG-------------------CGGCCTGTGACCTTAAAT-AATGCCCATATATGGTAATCCCT-----TTTGCCGGGTGACAG------TG--------------------------------------------------------AC----------CA-AAAACGAGGGATTT---G---------------GGGGCTCTTTTCTTATCGC----------TGC---AGTGACTCAATTTCGAA-----------------------------------------TA---------------------------TC-----------------T-ATTTCAGTCGGAAATGCAAATGGATTGTGCTTTGGATCTGATGCGGCGCCTGCCTCC
droEle1 scf7180000491273:1668640-1669026 - TGT-----ACA--CTTGA--TCA--AAAACAAAGGGAAAGCAA-A-AAAGTA-TCAAAATGGTGAGTAATACTAGTGTTAAATGGTAAG---------------------AAGA-AAAAAAACAGGGCCAACAAACGGTG-----GATTT----A-AGTGGCT---ACCGCCCATTT-C---TCAA--AGA----------------------------ATTAG--------TGTTTTTGT-----TGTG-T--TTAG------AACT----------------------------------TGACA-AAGAAGTGAATT---TGC-A-AAGGGCGG-------------------TGACCTG------AAAAT-AATGCCCATATATGGTAGTCCAA--T--ATTGCCGGGTGGCAT------TC--------------------------------------------------------------------CG-AAATTGAGGGACTTTTTG-----------------GTCACATTCCTTATCGCC----GCTG-CTC---AGTGACTCAATTTTTA--------------AA---G---------CCGTC--------TAT------T---TGCAACTA-AC------------------------TCTTTTCAGTCTGAAATGCAAATGGATTGTGCGCTGGATCTGATGCGACGACTGCCGCC
droRho1 scf7180000779518:21106-21477 + CTAA--GAGAAGTTTAAAGTCTATCGAAACAAAGGGAAAGCAA---AAAGTA-TCAAAATGGTGAGTAATACTATAGTA-AATGGTAAC---------------------AA---AAAAAAACG-GGCCAACAAACGGTG-----GATTT----T-AGTAGGT---GCCGCCCTTTC-T---AAAA--TAC----------------------------AAA-T-TA----GT-----T-----------------------------------------------TTATGCTGAAAATA--T--CAAAA--GGAAAACA---TTTATTTAGGGCGG-------------------CGGCCTGTGACCTGAAGT-AATGCCCATATATGGTAATCCCC-----TTTGCCGGTTGGCAG------TC--------------------------------------------------------------------TG-AAATCCAAGGCTTTTG-----------------GGGGCTC---TCTTATCGC----------CGC---AGTGACTCAATTTGAAA-------------A--CCT-------------------ATGTAT---------------------------C-----------------T-CTTTCAGTCGGAAATGCAAATGGATTGTGCTCTGGATCTAATGCGACGACTGCCGCC
droBia1 scf7180000302188:106113-106506 - TTAAAAGAGCGGCGTAGTTCCCATAGAAACAAAGGGAAAGCAA---AGAGTA-TCAAAATGGTGAGTAATACTACAGTT-GATGGTAACA---------CAAAACAAAAAAAAACAATAAAACA-GGCCAACAAGCGGTG-----G-TTT----TAAAGCGGT---GCCGCCCAATA-T---TTGA--CAA----------------------------AAAGG--------TTATCAAGT------TCG--------------AGAT----------------------------------G--CA-CA-AAGAAAACC---TTTTGTAGGGGCGG-------------------CGGCCTGGGGCCTTAAGTAAATGCCCATATATGGTAGTCCCG--T-TTTTGCCGGGTGGCAG------TC--------------------------------------------------------------------TA-AAACCAAGGGATTTTG-G---------------GGGGCTC--CTCTTATCGC----------TGC---CGTGACTCAATTTCAAA----------------TAA-------------------ATGTAT-----------------CT-------CC-----------------T-CTTTCAGTCGGAAATGCAAATGGATTGCGCTTTGGATCTGATGCGGAGGCTTCCTCC
droTak1 scf7180000415779:114054-114449 + A-------GCGGTCTCAGTCCCAACGAAACAAGGGGAAAGCAA---AAAGTA-TCAAAATGGTGAGTAATACTACGGTT-GATGGTGACT---------AA--AAAAAGAAAAACAAAAAAACA-GGCCAACAAACGGTG-----G-TTT----TATAGCGGT---GCCGCCCAGTC-T---TTGA--GGA----------------------------AAATG--------TATTTAAAT------TCT----T---------CATT----------------------------------T--CA-AA-GAGA-AACCTTATTT-ATAAGGGCGG-------------------CGGCCTGTGGCACCAAAT-AATGCCCATATATGGTAATCCCC--TGTTTTGCCGGGTGGCAG------TC--------------------------------------------------------------------TA-AAACCGGGGGATTTTG-G---------------GGGGCTCTCCTCTTATCGC----------TGC---AGTGACTCAATATAT--------------AAAG------------TATACAAAA--------------------AAATA-CC----------------------TCT-CTTTCAGTCGGAAATGCAAATGGATTGTGCTTTGGATTTGATGCGGAGGCTGCCGCC
droEug1 scf7180000407252:76205-76564 - T-----------------------CGAAACAAAGGGAAAGCAA---AAAGTA-TCAAAATGGTGAGTAATACTACAGTT-GATGGTAACA---------AA--AAGAT----GA-AAAAAAAGA-GGCCAACAAACGGTG-----T-CTT----TGTAGCGGT---GCCGCCTATTA-T---TAAA--G-A----------------------------AAAGT--------TTACCAAAT-----CGCT--------------AAAG----------------------------------A--CA-AA-G-GAAAACC---TTTAGTAAGGGCGG-------------------CGGCCTTCGGCCTTAAAT-GATGCCCATATATGGTAATCCCC--T-TTTTGCCGGGTGGCAA------TA--------------------------------------------------------------------GA-AAAGC-AGGAATTTTC-G---------------GTGGCTC---TCTTATCGC----------TGC---AGTGACTCAATTTCAAA----------------CAC-------------------ATATCT-----------------CT-------CT-----------------T-CTTTTAGTCGGAAATGCAAATGGATTGTGCTTTGGATCTGATGAGGAGGCTTCCGCC
dm3 chr2L:1705067-1705449 + A-------ACAGTGTAAA-ACTATCGAAACAA-GGGAAAGCAG---AAAGTA-CCAAAATGGTGAGTAATACTACAA-----TAGTAAC---------------------AAGAAAAAAAAGCA-GGCCAACAAACGGTG-----T-TTT----T-GGTCGGA---ACCGCCCATTC-T---GCAA--GCC----------------------------AAATA--------TTCT--TGGCAA-TCACC--------------TAAT----------------------------------C--CA-CC-GAGAAAACC---TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCCT--G-GTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGATTTTTTG-----------------GGCTC---TCTTATCGGC----GGTGGTGC---AGTGACTCAAATTCAATT----------TCA--CTG-------------------GTGTCT-----------------CT-------TCT------------CCTCTCTTCTCAGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGGAGGCTGCCGCC
droSim2 2l:1631865-1632230 + dsi_18665 A-------ACAGTGTGAG-ACTATCGAAACAA-GGGAAAGCAG---AAAGTA-ACAAAATGGTGAGTAATACTACAC-----TAGTAAC---------------------AAAA--AAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-GGTCGGA---ACCGCCCATTC-T---GCAA--GCC----------------------------AAAGA--------TTACCAAGA-----CACC--------------TAAT----------------------------------C--CA-CC-GAGAAAACC---TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCCT--T-GTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------AA-AAGCGGAGTGATTTTT-G-----------------AGCTC---TCTTATCGG----------TGC---AGTGACTCAAACTCAATT----------TCA--CTG-------------------GTGTCT-----------------CT-------TC-----------------T-CTTTCAGTCGGAAATGCAGATGGACTGTGCGTTGGATCTGATGCGGAGGCTGCCGCC
droSec2 scaffold_14:1639629-1639996 + A-------ACAGTGTGAA-ACTATCGAAACAA-GGGAAAGCAG---AAAGTA-ACAAAATGGTGAGTAATACTACAC-----TAGTAAC---------------------AAGA-AAAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-GGTCGGA---ACCGCCCAATC-T---GCAC--GCC----------------------------AAAGA--------TTACCAAAA-----CACC--------------TAAT----------------------------------C--CA-CC-GAGAAAACC---TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCCT--T-GTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGATTTTTTG-----------------GGCTC---TCTTATCGG----------TGC---AGTGACTCAAACTCAATT----------TCA--CTG-------------------GTGTCT-----------------CT-------TC-----------------T-CTTTCAGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGGAGGCTGCCGCC
droYak3 2L:1675743-1676114 + dya_191 A-------ACAGTGTGAA-ACCATCGAAACAA-GGGAAAGCAG---AAAGTA-ACAAAATGGTGAGTAATACTACAA-----TAGTAAC---------------------AAGA--AAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-CGACGGA---ACCGCCCAATC-C---ACAA--GGC----------------------------AAAGG--------TAACCAAGG-----CACC--------------TAAT----------------------------------C--CA-CG-CAGAGAAGC---TCC-GCAGGGGCGG-------------------CGGCCAGTGGCCTCAAAT-AATGCCCATATATGGTAATCCTC--T-TTTTGCCGGGTGGCAG------CA--------------------------------------------------------------------GA-AAGCGGAGGGGTTTTTTT-----------------GGCTC---TCTTATCGC----------TGC---AGTGACTCAATGGTAT-------------CA--ATG-------------------GTGTAT------C---TGTATCTCT-------GC-----------------T-CTTTCAGTCGGAAATGCAGATGGATTGCGCTTTGGATCTGATGCGGAGGCTGCCGCC
droEre2 scaffold_4929:1748678-1749038 + C-------ACAGTGTGAA-ACCATCGAAACAA-GGGAAAGCAG---AAAGTA-TCAAAATGGTGAGTAATACTACAA-----TAGTAAC---------------------AAGA--AAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-GGACGGT---ACCGCCCATGC-C---ATAA--GGC----------------------------AAAGG--------TTCCCGAGG-----CACC--------------TAAT----------------------------------C--CA-CG-GAGAGAACC---TGC-ACAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCTC--T-TTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------GT-GAATGGAGGGGTTTCTCG-----------------GGCTC---TCTTATCGC----------TGC---AGTGACTCAATA----------------AGA--CTG-------------------GTATCT-----------------CT-------TA-----------------T-CTTTCAGTCGGAAATGCAGATGGATTGTGCTTTGGATCTGATGCGGAGGCTGCCGCC
dp5 4_group3:3107559-3108009 - A--------CAGAGCAAT-AACATAGACGAAA-AGGAAAACAG-GAAAATCC-TCAAAATGGTGAGTAATAGTCGAGAT----ATGAAC---------------------AACACAACAAAAAA-GGCCAACAAAAGATC-----AG-TTA-----TTGTGCC---TCCGCCCCATA-A---TCAA--GACTTTCGCGTACGA---------------T----A--------T--------------ATA-----T---------ATATCACCGATGATGGTAGCTCTCAGTCGAAACGA--T--GCGAGT--GCAG-C-GGTGGT-ATAGGGGCGG-------------------CAGCCTATGACCTAAAAG-AATGCCCATATATGGTAGTCGTG----------------GCTGGCTCCTACGTTTACCGGTCGCGT-------------------------CGC---------ACTCATC------CCCA------CAGGGGAT-----------TACGTTTGCGGAGG--------TTATCAGC----ATTC-GGC---AATGACTCAATTCTAT-------------CGAC------------TCGACTAATT-------------------AAGTT-TCTCTTT--TTCGCGTTTCTTTTGTTT-TCTTTAGTCGGAAATGCAAATGGACTGCGCTTTGGATTTGATGCGCCGACTGCCGCC
droPer2 scaffold_1:4590352-4590802 - A--------CAGAGCAAT-AACATAGACGAAA-AGGAAAACAG-AAAAATCC-TCAAAATGGTGAGTAATAGTCGAGAT----ATGAAC---------------------AACACAACAAAAAA-GGCCAACAAAAGATC-----AG-TTA-----TTGTGCC---TCCGCCCCATA-A---TCAA--GACTTTCGCGTACGA---------------T----A--------T--------------ATA-----T---------ATATCACCGATGATGGTAGCTCTCAGTCGAAACGA--T--GCGAGT--GCAG-C-GGTGGT-ATAGGGGCGG-------------------CAGCCTATGACCTAAAAG-AATGCCCATATATGGTAGTCGTG----------------GCTGGCTCCTACGTTTACCGGTCGCGT-------------------------CGC---------ACTCATC------CCCA------CAGGGGAT-----------TACGTTTGCGGAGG--------TTATCAGC----ATTC-GAC---AATGACTCAATTTTAT-------------CGAC------------TCGACTAATT-------------------AAGTT-TCTCTTT--TTCGCGTTTCTTTTGTTT-TCTTTAGTCGGAAATGCAAATGGACTGCGCTTTGGATTTGATGCGCCGACTGCCGCC
droWil2 scf2_1100000004521:3596379-3596453 + TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAT-----------------CT-------TTT------------TCCAT-TTTCCAGTCCGAAATGCAAATGGATTGTGCTTTGGATCTGATGCGTCGTCTGCCGCC
droVir3 scaffold_12963:7807507-7807915 + dvi_10785 A-------ATAGAAAAAA--------------------AACAGTCACAGTTA-ACAAAATGGTGAGTAATACAAAAGAT--ATGAAAACAAATTGAACAAA--ACGAA-----------------GAACAAAAAAAAAAC----AAG-TTA-----TTTGGCT---GTCGCCCTATTGT---G-AA--ATA-TTGCTAAACAA---------------T----A--------C--------------AAA-----T---------ATATT--------------------------------C--G--------A-AAGCTGAAAC-ATTGGGGCGGGTAGTTA----------GTTGGCCTGCGACCTAAAAC-GATGCCCATATATGGTAGTAGTCGTG-GCGTGCCGGTTGGAAA------GG--------------------------------------------------------G-----------GCGAGGCGGCGAGG-----AT-----------------GGGCC---ACTTATCAGCTAGTGTGG-CAA---AATGAGTCAAAGCGAATGAGGAAACGTTTAA-TCCGGCGTTCAATCAGCA--------TATTTAAAAC-----------------------------ACTTTCGTTG-CTTACAGTCGGAAATGCAAATGGATTGTGCGTTGGATCTGATGAGGCGACTGCCGCC
droMoj3 scaffold_6500:3043251-3043308 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CTTGCAGTCGGAAATGCAAATGGATTGTGCGCTGGATTTGATGCGAAGATTGCCGCC
droGri2 scaffold_15252:10891985-10892440 + GCA--------CAACCAG-CCA---AAAGCAA---AAAAACAGTCACAGTTA-ACAAAATGGTGAGTAATACAAAAGAT--ATGAAAATAAGC-CACCGAA--AAGAA---------GAAAGAA-AAAAAAAACA----------AG-TTATTTT---TGGCT---GCCGCCCTAAG-TGACGCAGGTGCA----------------------------ACAAA--------TTATTGAGT------GTC--------------GAAT----------------------GCCGAAAGTATTT--C--------AATACT-GCCAC-ATTGGGTCGGGTTGTTGAGTTGTTGTTGTTGGCCTGTGACCTAAAAC-GATGCCCATATATGGAAGTCGTCGTG-GCGTGCCGGCTG------------------------T-----------------GTTGCTTTGTGGTGGGGTGTGG----AA----------GACAGGCGAAGAG-----TCG-----------------GGGTC---ACTTATCAGGCAGAGCCG-TGA---AATGACTCAAACTCAATGCGGGAATC--TAAAT------------CATAAG----ATAAAC------CATTTTCT---AT-------T--------------TGCTG-CTTACAGTCGGAAATGCAAATGGATTGTGCGCTGGATCTGATGAGACGGCTGCCGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CCA-----ACAGAGCCGC--AAAGCGCGACAA-AGGAAAACAA---ATCGCAACAAAAATGGTGAGTAATAGCCAAA-----AAATGAC---------------------AAAA--AAACAA------CAAAAAAAAGTG-----T-CGA----A-GATCGGT---GCCGCCCTGCC-A---GT-G--GCT----------------------------AAAAG--------AAAT--TGGAAA-----T--------------TAAT----------------------------------C--CA-TA-AAAGGGTCG---GTC-ATTGGGGTGG-------------------AAGTGCGGGTGCCCAAAA-CATGCCCATATATGGCAATCGT----------------GGCAA------CTGCTTACCGGTGGCCTGCCTCCCCCCACCCTCTCT---------------------------------------------------CTTT------------------GTCC---GCTTATCTTC----GA---TAC--AAATGACTCAAGTTAGTA-------------T--GTA-------------------ATGTAC------C----------GT-------TA-----------------T-CTTCCAGTCTGAGATGCAAATGGACTGTGCTTTGGATCTGATGCGTCGCCTGCCGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
CCA-----ACAGAGCCGC--AAAGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..A-----ACAGAGCCGC--AAAGCGCGACAA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.CA-----ACAGAGCCGC--AAAGCGCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGCAAATGGACTGTGCTT.........................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAAATGGACTGTGCT..........................1911.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATCTGATGCGTCGCCT......2111.001100000
........................................................................................C---------------------AAAA--AAACAA------CAAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droBip1
GAAA-----AAGAGC-AG-CACAGCGTGACAA-AGGAAAACAA---ATCGCAACCAAAATGGTGAGTAATAGCCAAAA----AAATGAC---------------------AAAACAACA----------AAAAAAAGGTG-----T-CGA----A-GATCGGT---GCCGCCCTTGT-A---GT-G--GCT----------------------------AAAAG--------AAAT--TGGAAA-----T--------------TAAT----------------------------------C--CC-TA-AAAAGGTCG---GTC-ACCAGGGTGG-------------------CAGTGCGGGACCCA-AAA-CATGCCCATATATGGCAATCGT----------------GGCAA------CTGCTTACCGGTGGC-TGCCTCCC-----CCTCTCC---------------------------------------------------CTTT-----------------GTCAC---CCTTATCTTC----GA---TAC--GAATGACTCAAGTTAGTA-------------T--TTA-------------------ATGTAC------C----------GT-------TA-----------------T-CTTTCAGTCTGAGATGCAAATGGACTGTGCTTTGGATCTGATGCGTCGCCTGCCGCCSizeHit CountTotal NormTotal
No Reads
droKik1
CCG---------ATTAAA-CCAAGTGAAACAA-AGGC---CCG--AAAGAGA-TCAAAATGGTGAGTAATAGTTCGG------------------------------------------AAAAA-GGCCAACAAACGGTGAATA-G-ATC----T-AAAAGGAGCCGCCGCCCCATG-A---TTAA--GTG-------AAAAGTAGAGAGATTTAGTATACAAGTTAAGAAGT-----T---------CTGTTGGCAGAAGGGGAAAG----------------------------------A--GA-A--------------------------------------------------AGAAGGGCCTAAAAC-AATGCCCATATAAGGCAATACCG--G-TCTTAC--------ACCCTCCTCCTCCCCGTGCTCTCTC-------------------------CTC---------ACTCCTCTTCTCTCCCAC-AAACTGGGGGATTTTA-GGGTATTTCTTTTTTGG-GGCTC--CTCTTATCGC----------CGCTCAAGTGACTCAACTTGCTT-------------T--T-----------------------------------------------------TC-CCTTCCTCATTCCCA-TCTCCACAGTCGGAAATGCAAATGGACTGCGCCTTGGACCTGATGCGTCGCCTGCCGCCSizeHit CountTotal NormTotal
No Reads
droFic1
A--------CAGTAAAAACCCCATCTAAACAAAGGGAAAGCA----AAAGTA-TCAAAATGGTGAGTAATAGTATAT-G-AATGGTAAC---------------------AGAA-AAAAAAACA-GGCCAACAAACGGTG-----T-TTT----TGTATCGGT---GTCGCCCATGC-T---G-AA--GTA----------------------------AAACT--------AAGT--TTTATAATCA------------------TA----------------------------------T--TAAAAGGAAAATACT---TTTGATAGGGGCGG-------------------CGGCCTGTGACCTTAAAT-AATGCCCATATATGGTAATCCCT-----TTTGCCGGGTGACAG------TG--------------------------------------------------------AC----------CA-AAAACGAGGGATTT---G---------------GGGGCTCTTTTCTTATCGC----------TGC---AGTGACTCAATTTCGAA-----------------------------------------TA---------------------------TC-----------------T-ATTTCAGTCGGAAATGCAAATGGATTGTGCTTTGGATCTGATGCGGCGCCTGCCTCCSizeHit CountTotal NormTotal
No Reads
droEle1
TGT-----ACA--CTTGA--TCA--AAAACAAAGGGAAAGCAA-A-AAAGTA-TCAAAATGGTGAGTAATACTAGTGTTAAATGGTAAG---------------------AAGA-AAAAAAACAGGGCCAACAAACGGTG-----GATTT----A-AGTGGCT---ACCGCCCATTT-C---TCAA--AGA----------------------------ATTAG--------TGTTTTTGT-----TGTG-T--TTAG------AACT----------------------------------TGACA-AAGAAGTGAATT---TGC-A-AAGGGCGG-------------------TGACCTG------AAAAT-AATGCCCATATATGGTAGTCCAA--T--ATTGCCGGGTGGCAT------TC--------------------------------------------------------------------CG-AAATTGAGGGACTTTTTG-----------------GTCACATTCCTTATCGCC----GCTG-CTC---AGTGACTCAATTTTTA--------------AA---G---------CCGTC--------TAT------T---TGCAACTA-AC------------------------TCTTTTCAGTCTGAAATGCAAATGGATTGTGCGCTGGATCTGATGCGACGACTGCCGCCSizeHit CountTotal NormTotal
No Reads
droRho1
CTAA--GAGAAGTTTAAAGTCTATCGAAACAAAGGGAAAGCAA---AAAGTA-TCAAAATGGTGAGTAATACTATAGTA-AATGGTAAC---------------------AA---AAAAAAACG-GGCCAACAAACGGTG-----GATTT----T-AGTAGGT---GCCGCCCTTTC-T---AAAA--TAC----------------------------AAA-T-TA----GT-----T-----------------------------------------------TTATGCTGAAAATA--T--CAAAA--GGAAAACA---TTTATTTAGGGCGG-------------------CGGCCTGTGACCTGAAGT-AATGCCCATATATGGTAATCCCC-----TTTGCCGGTTGGCAG------TC--------------------------------------------------------------------TG-AAATCCAAGGCTTTTG-----------------GGGGCTC---TCTTATCGC----------CGC---AGTGACTCAATTTGAAA-------------A--CCT-------------------ATGTAT---------------------------C-----------------T-CTTTCAGTCGGAAATGCAAATGGATTGTGCTCTGGATCTAATGCGACGACTGCCGCCSizeHit CountTotal NormTotal
No Reads
droBia1
TTAAAAGAGCGGCGTAGTTCCCATAGAAACAAAGGGAAAGCAA---AGAGTA-TCAAAATGGTGAGTAATACTACAGTT-GATGGTAACA---------CAAAACAAAAAAAAACAATAAAACA-GGCCAACAAGCGGTG-----G-TTT----TAAAGCGGT---GCCGCCCAATA-T---TTGA--CAA----------------------------AAAGG--------TTATCAAGT------TCG--------------AGAT----------------------------------G--CA-CA-AAGAAAACC---TTTTGTAGGGGCGG-------------------CGGCCTGGGGCCTTAAGTAAATGCCCATATATGGTAGTCCCG--T-TTTTGCCGGGTGGCAG------TC--------------------------------------------------------------------TA-AAACCAAGGGATTTTG-G---------------GGGGCTC--CTCTTATCGC----------TGC---CGTGACTCAATTTCAAA----------------TAA-------------------ATGTAT-----------------CT-------CC-----------------T-CTTTCAGTCGGAAATGCAAATGGATTGCGCTTTGGATCTGATGCGGAGGCTTCCTCCSizeHit CountTotal NormTotal
No Reads
droTak1
A-------GCGGTCTCAGTCCCAACGAAACAAGGGGAAAGCAA---AAAGTA-TCAAAATGGTGAGTAATACTACGGTT-GATGGTGACT---------AA--AAAAAGAAAAACAAAAAAACA-GGCCAACAAACGGTG-----G-TTT----TATAGCGGT---GCCGCCCAGTC-T---TTGA--GGA----------------------------AAATG--------TATTTAAAT------TCT----T---------CATT----------------------------------T--CA-AA-GAGA-AACCTTATTT-ATAAGGGCGG-------------------CGGCCTGTGGCACCAAAT-AATGCCCATATATGGTAATCCCC--TGTTTTGCCGGGTGGCAG------TC--------------------------------------------------------------------TA-AAACCGGGGGATTTTG-G---------------GGGGCTCTCCTCTTATCGC----------TGC---AGTGACTCAATATAT--------------AAAG------------TATACAAAA--------------------AAATA-CC----------------------TCT-CTTTCAGTCGGAAATGCAAATGGATTGTGCTTTGGATTTGATGCGGAGGCTGCCGCCSizeHit CountTotal NormTotal
No Reads
droEug1
T-----------------------CGAAACAAAGGGAAAGCAA---AAAGTA-TCAAAATGGTGAGTAATACTACAGTT-GATGGTAACA---------AA--AAGAT----GA-AAAAAAAGA-GGCCAACAAACGGTG-----T-CTT----TGTAGCGGT---GCCGCCTATTA-T---TAAA--G-A----------------------------AAAGT--------TTACCAAAT-----CGCT--------------AAAG----------------------------------A--CA-AA-G-GAAAACC---TTTAGTAAGGGCGG-------------------CGGCCTTCGGCCTTAAAT-GATGCCCATATATGGTAATCCCC--T-TTTTGCCGGGTGGCAA------TA--------------------------------------------------------------------GA-AAAGC-AGGAATTTTC-G---------------GTGGCTC---TCTTATCGC----------TGC---AGTGACTCAATTTCAAA----------------CAC-------------------ATATCT-----------------CT-------CT-----------------T-CTTTTAGTCGGAAATGCAAATGGATTGTGCTTTGGATCTGATGAGGAGGCTTCCGCCSizeHit CountTotal NormTotal
No Reads
dm3
A-------ACAGTGTAAA-ACTATCGAAACAA-GGGAAAGCAG---AAAGTA-CCAAAATGGTGAGTAATACTACAA-----TAGTAAC---------------------AAGAAAAAAAAGCA-GGCCAACAAACGGTG-----T-TTT----T-GGTCGGA---ACCGCCCATTC-T---GCAA--GCC----------------------------AAATA--------TTCT--TGGCAA-TCACC--------------TAAT----------------------------------C--CA-CC-GAGAAAACC---TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCCT--G-GTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGATTTTTTG-----------------GGCTC---TCTTATCGGC----GGTGGTGC---AGTGACTCAAATTCAATT----------TCA--CTG-------------------GTGTCT-----------------CT-------TCT------------CCTCTCTTCTCAGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGGAGGCTGCCGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTGGATCTGATGCGGAGGCT......2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGTGCTTTGGATCTGATGCG............2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGTGCTTTGGATCTG.................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGATGCGGAGGCT......1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AA-GGGAAAGCAG---AAAGTA-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TATCGAAACAA-GGGAAAGCAG---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCTGATGCGGAGGCTGC....2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAATGCAGATGGACTGTGCT..........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTGGATCTGATGCGGA..........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGATCTGATGCGGAGGCTG.....2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGAT.............................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............AAA-ACTATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTGGATCTGATGCGGAGGC.......2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACTGTGCTTTGGA.....................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGACTGTGCTTTGG......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCTGATGCGGAGGC.......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTGGATCTGATGCGGA..........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATCTGATGCGGAGGC.......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000
..............TAAA-ACTATCGAAACAA-GGGAAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATCTGATGCGGAGGCT......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGATCTGATGCGGAGGC.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000
...............................A-GGGAAAGCAG---AAAGTA-CCAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGATCTGATGCGGAGGC.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000
..............TAAA-ACTATCGAAACAA-GGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................AAACGGTG-----T-TTT----T-GGTCGGA---ACCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGATGCGGAGGCTGCCG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGATGGACTGTGCT..........................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGTGCTTTGGATCTGA................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCGAAACAA-GGGAAAGCAG---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCT.........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................CAA-GGGAAAGCAG---AAAGTA-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATGCAGATGGACTG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGATGCGGAGG........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGATGCGGAGGCTGCC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATGCGGAGGCTGCC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGATGCGGAGGCTGC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGTGTAAA-ACTATCGAAACAA-GGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGATCTGATGCGG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGTGCTTTGGATC...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGATGCGGAGGC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTTTTTG-----------------GGCTC---TCTTATCGGC----G...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGTGCTTTGGATCTGATGC.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................AA-GGGAAAGCAG---AAAGTA-CCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAATGCAGATGGACTGTGCTT.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AA-GGGAAAGCAG---AAAGTA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGATGGACTGTGCTTT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCGAAACAA-GGGAAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................AA-ACTATCGAAACAA-GGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATGCGGAGGCTGC....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGCAGATGGACTGTGCT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTGGATCTGATGC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGTCGGAAATGCAGATGG..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACAGTGTAAA-ACTATCGAAACAA-GGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.....................TATCGAAACAA-GGGAAAGCAG---AAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................CC-AGAGGGGCGG-------------------CGGCCTGTG.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGACTGTGCTTTGGAT....................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAATGCAGATGGACTGTGCTTT........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCC-AGAGGGGCGG-------------------CGGCCTGT..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATCTGATGCGGAGG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGA..............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
A-------ACAGTGTAAA-ACTATCGAAACAA-GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGATCTGATGCGGAGGCTGC....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AACC---TCC-AGAGGGGCGG-------------------CGGCC.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGCGGAGGGATTTTTTG-----------------GGC...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCTTTGGATCTGATGCGGAG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTAAA-ACTATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GAAAACC---TCC-AGAGGGGCGG-------------------CGGC..................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAATGCAGATGGACTGT.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGGGTGGCAG------TG--------------------------------------------------------------------GA-AAGC.....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-----------------GGCTC---TCTTATCGGC----GGT.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTG-----------------GGCTC---TCTTATCGGC----................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................A-ACTATCGAAACAA-GGGAAAGCAG---AAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................CGAAACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGATGGACTGTGCTTTGGAT....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGTGTAAA-ACTATCGAAACAA-GGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGATGCGGAGGCTGC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGATT............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATGCAGATGGACTGTGCT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............TGTAAA-ACTATCGAAACAA-GGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AAAACC---TCC-AGAGGGGCGG-------------------C.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTTTTTG-----------------GGCTC---TCTTATCGGC----G...............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCTGTGGCCTCAAAT-AATG...............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGATGCGGAGGCTG.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGGACTGTGCTTTGGATCT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGATGCGGAGGCTGCCG..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGGAGGGATTTTTTG-----------------GGC...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................A-ACTATCGAAACAA-GGGAAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCAGTCGGAAATGCAGATGGACTG..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGTGCTTTGGATCTGATGC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAGCAG---AAAGTA-CCAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGTAAA-ACTATCGAAACAA-GGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCAG---AAAGTA-CCAAAATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAATGCAGATGGACTGTG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AGAAAACC---TCC-AGAGGGGCGG-------------------......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATCTGATGCGGAGGCTGCCG..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAAACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACTGTGCTTTGGATC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAA-ACTATCGAAACAA-GGGAAAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................TATCGAAACAA-GGGAAAGCAT---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGAT.............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................AA-GGGAAAGCAG---AAAGTA-CC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGTCGGAAATGCAGATG...................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A-------ACAGTGTGAG-ACTATCGAAACAA-GGGAAAGCAG---AAAGTA-ACAAAATGGTGAGTAATACTACAC-----TAGTAAC---------------------AAAA--AAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-GGTCGGA---ACCGCCCATTC-T---GCAA--GCC----------------------------AAAGA--------TTACCAAGA-----CACC--------------TAAT----------------------------------C--CA-CC-GAGAAAACC---TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCCT--T-GTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------AA-AAGCGGAGTGATTTTT-G-----------------AGCTC---TCTTATCGG----------TGC---AGTGACTCAAACTCAATT----------TCA--CTG-------------------GTGTCT-----------------CT-------TC-----------------T-CTTTCAGTCGGAAATGCAGATGGACTGTGCGTTGGATCTGATGCGGAGGCTGCCGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAATGCAGATGGACG...............................1811.00110000000000000000
............TGTGAG-ACTATCGAAACAA-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
A-------ACAGTGTGAG-ACTATCGAAACAA-GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................TATCGAAACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGGATCTGATGCGGAG.........1911.00100000000000100000
droSec2
A-------ACAGTGTGAA-ACTATCGAAACAA-GGGAAAGCAG---AAAGTA-ACAAAATGGTGAGTAATACTACAC-----TAGTAAC---------------------AAGA-AAAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-GGTCGGA---ACCGCCCAATC-T---GCAC--GCC----------------------------AAAGA--------TTACCAAAA-----CACC--------------TAAT----------------------------------C--CA-CC-GAGAAAACC---TCC-AGAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCCT--T-GTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------GA-AAGCGGAGGGATTTTTTG-----------------GGCTC---TCTTATCGG----------TGC---AGTGACTCAAACTCAATT----------TCA--CTG-------------------GTGTCT-----------------CT-------TC-----------------T-CTTTCAGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGGAGGCTGCCGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGTGCTTTGGATCTGATGC.............2312.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-----------------GGCTC---TCTTATCGG----------TGC---AGT..................................................................................................................................................................2311.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTGGATCTGATGC.............1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGCAGATGGACTGTGCTTTGGATCT..................2811.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCTTTGGATCTGATGCGGAG.........2411.0010100
...............GAA-ACTATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGGACTGTGCTTTGG......................1911.0010010
.....................TATCGAAACAA-GGGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGATCTGATGCGG...........1811.0010010
droYak3
A-------ACAGTGTGAA-ACCATCGAAACAA-GGGAAAGCAG---AAAGTA-ACAAAATGGTGAGTAATACTACAA-----TAGTAAC---------------------AAGA--AAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-CGACGGA---ACCGCCCAATC-C---ACAA--GGC----------------------------AAAGG--------TAACCAAGG-----CACC--------------TAAT----------------------------------C--CA-CG-CAGAGAAGC---TCC-GCAGGGGCGG-------------------CGGCCAGTGGCCTCAAAT-AATGCCCATATATGGTAATCCTC--T-TTTTGCCGGGTGGCAG------CA--------------------------------------------------------------------GA-AAGCGGAGGGGTTTTTTT-----------------GGCTC---TCTTATCGC----------TGC---AGTGACTCAATGGTAT-------------CA--ATG-------------------GTGTAT------C---TGTATCTCT-------GC-----------------T-CTTTCAGTCGGAAATGCAGATGGATTGCGCTTTGGATCTGATGCGGAGGCTGCCGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................CGAAACAA-GGGAAAGCAG---AAAGTA-AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATGCGGAGGCTGC....1811.00101000000000
...............GAA-ACCATCGAAACAA-GGGAAAGCAG---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..............................AA-GGGAAAGCAG---AAAGTA-ACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................AAACAA-GGGAAAGCAG---AAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGATTGCGCTTTGGATCT..................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTGCGCTTTGGATCTGATG..............2411.00100000010000
...........GTGTGAA-ACCATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................CGAAACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-------GC-----------------T-CTTTCAGTCGGAAATGCAGATGG..................................2811.00100000010000
...........................AACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATGCAGATGGATTGCGCC..........................2211.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTTTTT-----------------GGCTC---TCTTATCGC----------TGC---AG...................................................................................................................................................................2811.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGATGCGGAGGCTGCCGC.2011.00101000000000
..........AGTGTGAA-ACCATCGAAACAA-GGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC---TCTTATCGC----------TGC---AGTGACTC.............................................................................................................................................................2311.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTGCGCTTTGGATC...................1911.00100100000000
..............................AA-GGGAAAGCAG---AAAGTA-AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGATCTGATGCGGAGG........2111.00101000000000
.................A-ACCATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
C-------ACAGTGTGAA-ACCATCGAAACAA-GGGAAAGCAG---AAAGTA-TCAAAATGGTGAGTAATACTACAA-----TAGTAAC---------------------AAGA--AAAAAGCA-GGCCAACAAACGGTG-----A-TTT----T-GGACGGT---ACCGCCCATGC-C---ATAA--GGC----------------------------AAAGG--------TTCCCGAGG-----CACC--------------TAAT----------------------------------C--CA-CG-GAGAGAACC---TGC-ACAGGGGCGG-------------------CGGCCTGTGGCCTCAAAT-AATGCCCATATATGGTAATCCTC--T-TTTTGCCGGGTGGCAG------TG--------------------------------------------------------------------GT-GAATGGAGGGGTTTCTCG-----------------GGCTC---TCTTATCGC----------TGC---AGTGACTCAATA----------------AGA--CTG-------------------GTATCT-----------------CT-------TA-----------------T-CTTTCAGTCGGAAATGCAGATGGATTGTGCTTTGGATCTGATGCGGAGGCTGCCGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTGGATCTGATGCGGA..........2111.0010000010
......................ATCGAAACAA-GGGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGATTGTGCTTTGGATCTGAT...............2511.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGATGGATTGTGCT..........................1911.0010000010
......................ATCGAAACAA-GGGAAAGCAG---AAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
......................................AGCAG---AAAGTA-TCAAAATGGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGATGGATTGTGCTTTGG......................2111.0010000100
..............................AA-GGGAAAGCAG---AAAGTA-TCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGATTGTGCTTTGGAT....................2011.0010000100
......................................AGCAG---AAAGTA-TCAAAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
......................ATCGAAACAA-GGGAAAGCAG---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGGATTGTGCTTTG.......................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTGGATCTGATGCGGAGGC.......2411.0010000100
dp5
A--------CAGAGCAAT-AACATAGACGAAA-AGGAAAACAG-GAAAATCC-TCAAAATGGTGAGTAATAGTCGAGAT----ATGAAC---------------------AACACAACAAAAAA-GGCCAACAAAAGATC-----AG-TTA-----TTGTGCC---TCCGCCCCATA-A---TCAA--GACTTTCGCGTACGA---------------T----A--------T--------------ATA-----T---------ATATCACCGATGATGGTAGCTCTCAGTCGAAACGA--T--GCGAGT--GCAG-C-GGTGGT-ATAGGGGCGG-------------------CAGCCTATGACCTAAAAG-AATGCCCATATATGGTAGTCGTG----------------GCTGGCTCCTACGTTTACCGGTCGCGT-------------------------CGC---------ACTCATC------CCCA------CAGGGGAT-----------TACGTTTGCGGAGG--------TTATCAGC----ATTC-GGC---AATGACTCAATTCTAT-------------CGAC------------TCGACTAATT-------------------AAGTT-TCTCTTT--TTCGCGTTTCTTTTGTTT-TCTTTAGTCGGAAATGCAAATGGACTGCGCTTTGGATTTGATGCGCCGACTGCCGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATTTGATGCGCCGACTGCCGCT2712.0020000000200
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCCTACGTTTACCG........................................................................................................................................................................................................................................................................................................1811.0011000000000
......................ATAGACGAAA-AGGAAAACAG-GAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGGACTGCGCTTTG.......................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGATTTGATGCGCCGAC.......2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATT-------------------AAGTT-TCTCTTT--TTCGCGTTTC..................................................................2811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGATTTGATGCGCCGA........2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................ATAGGGGCGG-------------------CAGCCTATGAC...........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAATGCAAATGGACTGCGCTT.........................2511.0010100000000
................AT-AACATAGACGAAA-AGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................CCCCATA-A---TCAA--GACTTTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.............GCAAT-AACATAGACGAAA-AGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGATTTGATGCGCCGA........2111.0010000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATGCAAATGGACTG..............................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAATGGACTGCGCTTT........................2011.0010100000000
.............GCAAT-AACATAGACGAAA-AGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATGGACTGCGCTTTG.......................1911.0010100000000
droPer2
A--------CAGAGCAAT-AACATAGACGAAA-AGGAAAACAG-AAAAATCC-TCAAAATGGTGAGTAATAGTCGAGAT----ATGAAC---------------------AACACAACAAAAAA-GGCCAACAAAAGATC-----AG-TTA-----TTGTGCC---TCCGCCCCATA-A---TCAA--GACTTTCGCGTACGA---------------T----A--------T--------------ATA-----T---------ATATCACCGATGATGGTAGCTCTCAGTCGAAACGA--T--GCGAGT--GCAG-C-GGTGGT-ATAGGGGCGG-------------------CAGCCTATGACCTAAAAG-AATGCCCATATATGGTAGTCGTG----------------GCTGGCTCCTACGTTTACCGGTCGCGT-------------------------CGC---------ACTCATC------CCCA------CAGGGGAT-----------TACGTTTGCGGAGG--------TTATCAGC----ATTC-GAC---AATGACTCAATTTTAT-------------CGAC------------TCGACTAATT-------------------AAGTT-TCTCTTT--TTCGCGTTTCTTTTGTTT-TCTTTAGTCGGAAATGCAAATGGACTGCGCTTTGGATTTGATGCGCCGACTGCCGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGAAATGCAAATGGACTGC.............................2213.003300000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTAGTCGTG----------------GCTGGCTCCTAC................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAATGCAAATGGACTGCGCTTT........................2611.001100000
..................................................................................................................................................................................................................................................................................................GTCGAAACGA--T--GCGAGT--GCAG-C-GGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGACTGCGCTTTGGATTTGAT...............2511.001100000
.........................................................................................................................................................................................................................................................................................................................GCAG-C-GGTGGT-ATAGGGG............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATGGACTGCGCTTTG.......................1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-----------TACGTTTGCGGAGG--------TT..........................................................................................................................................................................................1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAATGGACTGCGCTTTGG......................2211.001010000
droWil2
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAT-----------------CT-------TTT------------TCCAT-TTTCCAGTCCGAAATGCAAATGGATTGTGCTTTGGATCTGATGCGTCGTCTGCCGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGGATTGTGCTTTG.......................2012.00202000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATTGTGCTTTGGAT....................1911.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGATGCGTCGTCTGCC...2311.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAAATGGATTGTGCTTT........................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGCAAATGGATTGTGCTTT........................2311.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATGGATTGTGCTTTGGA.....................2111.00101000
droVir3
A-------ATAGAAAAAA--------------------AACAGTCACAGTTA-ACAAAATGGTGAGTAATACAAAAGAT--ATGAAAACAAATTGAACAAA--ACGAA-----------------GAACAAAAAAAAAAC----AAG-TTA-----TTTGGCT---GTCGCCCTATTGT---G-AA--ATA-TTGCTAAACAA---------------T----A--------C--------------AAA-----T---------ATATT--------------------------------C--G--------A-AAGCTGAAAC-ATTGGGGCGGGTAGTTA----------GTTGGCCTGCGACCTAAAAC-GATGCCCATATATGGTAGTAGTCGTG-GCGTGCCGGTTGGAAA------GG--------------------------------------------------------G-----------GCGAGGCGGCGAGG-----AT-----------------GGGCC---ACTTATCAGCTAGTGTGG-CAA---AATGAGTCAAAGCGAATGAGGAAACGTTTAA-TCCGGCGTTCAATCAGCA--------TATTTAAAAC-----------------------------ACTTTCGTTG-CTTACAGTCGGAAATGCAAATGGATTGTGCGTTGGATCTGATGAGGCGACTGCCGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGTGCGTTGGATCTGATGAGGC..........2611.001000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGATGAGGCGACTGCCGG.2511.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAATGGATTGTGCGTT........................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGG-CAA---AATGAGTCAAAGC........................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AAC-GATGCCCATATATGGTAG.................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATGGATTGTGCGTTGGA.....................2111.001000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A------GG--------------------------------------------------------G-----------GCGAGGCGGCGAGG-----AT-----------------......................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGGATCTGATGAGGCG.........2011.001000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGATTGTGCGTTGGATC...................2111.001000000010000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGATCTGATGAGGCGACTGCCGC.2611.001000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA-TCCGGCGTTCAATCAGCA--------TAT........................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCCATATATGGTAGTAGTCGTG-G.......................................................................................................................................................................................................................................................................................................................................2411.001000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A------GG--------------------------------------------------------G-----------GCGAGGCGGCGAGG-----AT-----------------GG....................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGTGCGTTGGATCTGATGAGG...........2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTTGGATCTGATGAGG...........2011.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTAGTCGTG-GCGTGCCGGTT.............................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CTTGCAGTCGGAAATGCAAATGGATTGTGCGCTGGATTTGATGCGAAGATTGCCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTGTGCGCTGGATTTGATGC.............2511.001000001
droGri2
GCA--------CAACCAG-CCA---AAAGCAA---AAAAACAGTCACAGTTA-ACAAAATGGTGAGTAATACAAAAGAT--ATGAAAATAAGC-CACCGAA--AAGAA---------GAAAGAA-AAAAAAAACA----------AG-TTATTTT---TGGCT---GCCGCCCTAAG-TGACGCAGGTGCA----------------------------ACAAA--------TTATTGAGT------GTC--------------GAAT----------------------GCCGAAAGTATTT--C--------AATACT-GCCAC-ATTGGGTCGGGTTGTTGAGTTGTTGTTGTTGGCCTGTGACCTAAAAC-GATGCCCATATATGGAAGTCGTCGTG-GCGTGCCGGCTG------------------------T-----------------GTTGCTTTGTGGTGGGGTGTGG----AA----------GACAGGCGAAGAG-----TCG-----------------GGGTC---ACTTATCAGGCAGAGCCG-TGA---AATGACTCAAACTCAATGCGGGAATC--TAAAT------------CATAAG----ATAAAC------CATTTTCT---AT-------T--------------TGCTG-CTTACAGTCGGAAATGCAAATGGATTGTGCGCTGGATCTGATGAGACGGCTGCCGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGGATTGTGCGCTGGATCTG.................2411.00101

Generated: 05/17/2015 at 11:46 PM