ID:

dan_912

 Coordinate:

scaffold_12943:1127153-1127303 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.34 -13.24 -13.04

Flybase annnotation

exon [dana_GLEANR_589:2]; CDS [Dana\GF21892-cds]; intron [Dana\GF21892-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTTAAAGTGTGCGAAAAATGTAGTGACAGTGTAGAGGCCGAAACGAGAGCGCAAAAGTGTCCCCAGAACGCACACACACACACACACAGCAGAAGAAATAAAAGCAAAGTGCGAAGACAAAGCAAAAGCGAAGAAAATCAACAGAAAAGAAAAGGCGAAAACGGTGCCAAAAGTATTTAATAATTTAAAATTTAAATAGACAGAAGAAGAAGAAGAAGAGGACAAGGAGGAGGAGGCCACCATTGTGCG
**************************************************.(((.....(((........(((((...................................)))))........)))...))).......................((((.......)))).....(((((((...........))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 V055
head
 V106
head
 V039
embryo
 M044
female body
.........................................................................................................................AAGCAAAAACGAAGAAATTCAA............................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................................................................AAATAGACAGAATAAGAAGAA................................... 21 1 1 1.00 1 1 0 0 0 0 0
...................AGGTAGTGACAGTGTAGAGGCC.................................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AGAGGACAAGGAGGAGGA............... 18 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGAAATAAAAGCAAAGTGCGAA...................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................CGAAAACGGTGTCAAAAG............................................................................ 18 1 2 0.50 1 0 0 0 1 0 0
..................................................................................................................................................AAAAGAAAAGGCGAAACC....................................................................................... 18 1 3 0.33 1 1 0 0 0 0 0
........................................................................................................................................................................................................................GTAGAGGGCAAGGAGGTGGAGG............. 22 3 3 0.33 1 0 0 0 0 1 0
....................................................................................................................................................................................................................ATAGGAAGAGGACAAGGAGGAGGA............... 24 2 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................................................................................AATAGATAGAAGAAGAAGA.................................... 19 1 3 0.33 1 0 1 0 0 0 0
..................................................................................................................................CGAAGAAAATCAAAAGAAA...................................................................................................... 19 1 4 0.25 1 1 0 0 0 0 0
...................................................................................................................................................AAAGCAAAGGCGAAAACGGA.................................................................................... 20 2 5 0.20 1 1 0 0 0 0 0
.............................................................................................GAAGAAATAAAAGCAAAGGGA......................................................................................................................................... 21 2 5 0.20 1 1 0 0 0 0 0
............................................................................................................................CAAAAGCGAAGAATATAAAGAG......................................................................................................... 22 3 7 0.14 1 1 0 0 0 0 0
.........................................................................................................................................AATCAACAGCAAGGAAAAG............................................................................................... 19 2 7 0.14 1 0 0 1 0 0 0
...............................................................................................................................................................................................................GAAAAAGAAGCAGAGGACAA........................ 20 2 8 0.13 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................GGACAAGGAGTTGGAGGTCAC......... 21 3 13 0.08 1 1 0 0 0 0 0
........................................................................CACACACACACACACACAGCA.............................................................................................................................................................. 21 0 16 0.06 1 1 0 0 0 0 0
..................................................................AGAACGCACACACCCACCC...................................................................................................................................................................... 19 2 19 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................................AAGTCAAGGAGGAGGAGCCCA.......... 21 3 19 0.05 1 0 0 0 0 0 1
..................................................................................................................................................................................................TAAAGAGACAGAAGAACA....................................... 18 2 20 0.05 1 1 0 0 0 0 0
.ATTTAAAGTGTGCGTAATAG...................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................AGAAAACCAACAGAGGAGAAA................................................................................................. 21 3 20 0.05 1 1 0 0 0 0 0
.......................AGCGAGTGTGTAGAGGCC.................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................AGAAGAAAAAGAAGAGGACACA....................... 22 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................GCGAAAAGGCGAAAATGGTG................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1
...............................................................................................................................................CAGAAAAGAAAAGGGCAGAAC....................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0
.................................................AGCGCAAAAGGGTCCCGA........................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 1
.......................................................................................................................CAAAGCAAAAGCGAAGACC................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................ATCAATAGAAAAGAGAAGGA............................................................................................. 20 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

TTAAATTTCACACGCTTTTTACATCACTGTCACATCTCCGGCTTTGCTCTCGCGTTTTCACAGGGGTCTTGCGTGTGTGTGTGTGTGTGTCGTCTTCTTTATTTTCGTTTCACGCTTCTGTTTCGTTTTCGCTTCTTTTAGTTGTCTTTTCTTTTCCGCTTTTGCCACGGTTTTCATAAATTATTAAATTTTAAATTTATCTGTCTTCTTCTTCTTCTTCTCCTGTTCCTCCTCCTCCGGTGGTAACACGC
**************************************************.(((.....(((........(((((...................................)))))........)))...))).......................((((.......)))).....(((((((...........))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 V055
head
 M058
embryo
.............................................................AGGGGTCTTGCGCGTGTATG.......................................................................................................................................................................... 20 2 1 1.00 1 1 0 0
.............................................................AGGGGTCTGGCGGGTGTGTG.......................................................................................................................................................................... 20 2 1 1.00 1 1 0 0
.......................................................TTTCACAGGGGTCTTGGGTTTC.............................................................................................................................................................................. 22 3 1 1.00 1 0 1 0
.........................................................TCAGAGGGGTCTTGGGTGT............................................................................................................................................................................... 19 2 3 0.33 1 0 1 0
..........................................................GACAGGGGTCTTGCGTTT............................................................................................................................................................................... 18 2 6 0.17 1 0 1 0
........................................................TTGACGGGGGTCTTGGGTGT............................................................................................................................................................................... 20 3 16 0.06 1 0 1 0
..........................................................CATAGGGGACTTTCGTGTG.............................................................................................................................................................................. 19 3 19 0.05 1 0 0 1
.................GTTACATCACTGTCACGGC....................................................................................................................................................................................................................... 19 3 19 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:1127103-1127353 - dan_912 AATTTAA-------AGTGTG-CG--------------------------------------------------------AAAAATGT---AGTGACAGTGTAGAG---GCCGAAACGAGAGCGCAAA--AGTGTC----CCCAGAA-CGCACACA------------------------------------------------------------------------CACACAC------AC--AC----A--G--CAGAAGAAATA-AA-------------------------------AGCAA---------------------------A-----------G-------TGCGAAGACAAAGCAAAAGCGAAGAAAATC------A-----------------ACAGAA------------------------------------------------------------AAG-AAAAGGCGA--A--AACGGTGCCAA-----AA-----GTATTTAATAATTTAAAATT--------------------TAAATAGACAG----AA--G-AAGA--------------------AGAAG---AAGAGGACAAGGAGGAGGAGGCCAC------------------------------------C--------ATTG-TGCG
droBip1 scf7180000396728:2064250-2064527 + AATTTAAAAAAAAAAGTGTG-CG--------------------------------------------------------AAACATAT---AGTGACAGTGGAGAGAG-GCCAAAACGAGAGCGCAAAAGTG-TCC----CCCAGAA-C--AAACACAC----------------------------------------------------------------------ACACAT------ACATAAGCCTATAA--AAA------AAAAC-------------------------------CTCAA---------------------------A-----------G-------TGCGAAGACAAAGCA----------AAAAG------A-A------------AAAGCAAAAATCAACTGA--------------------------------------------------AAAGAAAAAGGCAAAAA--AACGGTGCCAA-----AA-----GTATTTAATAATTTAAAATT--------------------TAAATAGACAG--------AGAGTG--------------------ATCTT---GGTGGAGTGAAGAAGAGGAGGCAAC--C--AGCCA------------------------GCC--------ATTG-TGCG
droKik1 scf7180000302472:2055270-2055584 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTAGAAAAGTGCCTGCGAAGAGAGCGCAAAAGCGAGATTGCAAA--AACTAA----ACCAGAAGCGCACACGCACACAC-------------------------ACA-------GCAACAGTGTGACACTCGC----GCACCTACACA-------------------------------------AG-------------------------------CGTAA---------------------------A-----------G-------T-----------GCAAAGGCAAAACGCTCAA--------AAATAAAACGAAAACACAA--------------AAAA--ATAAACAA--------------------------A--AACAAAAGCAAAAGGCAACAA--GACGGTGCCAA-----AA-----GTATTTAATAATT---------------------------TAAATAGACAG--------A-AATC------TTTGTGGGACGTG-AGAAA---G--------AAGAAGAAGAAGCAACAAATATGCGT--------------GTGCGGGTGTAAC--------AGTG-TGCG
droFic1 scf7180000454144:95427-95688 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTAAAAAGAGAGGGCGAA--AATTAA----ACCAGAAGCGCATACATATACAG-------------------------AAACACT-------------------CGC----GCACCTACACACAC------AC--AC----T--T--GAG------TG-AA-------------------------------TGTAA---------------------------A-----------GA-----------------AGTAAAGGCAAAAGGAA--------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------TAAATAGACAA--------A-AATG--------------------AGAGG---GA-GGTAAAAGGAAGAAGAAGCTAAA-C--TGCGT-----------------------------------------GTG
droEle1 scf7180000491186:2725150-2725408 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTA-AAAGAGATCGCAAA--ATTTAA----ACCAGAAGCGCATACACATACAC-------------------------CTACACT-------------------CGC----GCACGTACACACAA------AC--AC----ACAG--AAT------CA-AA-------------------------------TGTAA---------------------------A-----------AA-----------------AGCAAAGT------AAAAG------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------TCA--AGACAA--------A-AATG--------------------AGAGA---GAAAATGAA---AAGAAGAAGCAGAA-C--TGCGT----------------GCG---------------------GGTG
droRho1 scf7180000778085:238803-239058 + AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTAAAAGGAGATCGCAAA--AATTAA----ACCAGAAGCGCATACACATACAC-------------------------CTACACT-------------------TGC----GCACGTACACACAC----------------A--C--AAG------TG-AA-------------------------------TGTAA---------------------------A-----------GA-----------------AGCAAAGTCAAAG------------A-A------------AAATCAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAAAAAAA-----GTATTTAATAATT---------------------------TAAATAGACAA--------A-AATG--------------------AGAGA---GAAAAT----AAAAGAAGAAGCAGAA-C--TGCGT----------------GCG---------------------AGTG
droBia1 scf7180000302408:3460499-3460768 + AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCCGAGGAGAGATCGCAAA---ATAAA----ACCA---ACGCACACACATGCAC-------------------------ATTAACT-------------------CGC----GCACACACACACAG--GCGCGC--AC----T--C--AAG------TG-AA----------TGTAAAA--------------TGTAA---------------------------A-----------GA-----------------AGCAAAGGCAAGGGAAATG------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCGAAAA--AGC-----GTATTTAATAATT---------------------------TAAATAGACAG--------A-AATG--------------------AGCGG---GAGGGGGAGAGGAAGA---GGCAGCA-G--TGCGT--------------------------------------G-CGAG
droTak1 scf7180000415880:171812-172077 + AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAAAGAGATCGCTGA--AATCAA----ACCAGAAGCGCATACACATGCAC-------------------------GTAAACT-------------------CGC----GCACACACACACGC----GCGC--AC----T--C--GAG------TG-AA-------------------------------TGTAA---------------------------A-----------GA-----------------AGCAAAGGCAGAGAAAATGA-----A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAA-AAAAGAAGCGTATTTAATAATT---------------------------TAAATAGACAA--------A-ACTG--------------------AGAGG---GAAAATGCGAAGAAGA---GGCAGCA-G--TG---------------------------------------------CG
droEug1 scf7180000409554:5233307-5233577 + AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTAAAAAGAGATCACAAA--AATTAA----ACCAGAAGCGCATACACATGCAC-------------------------ATAAACT-------------------TGC----GCACATACACGCAC----ACGC--AC----A--C--AAG------TG-TA-------------------------------TGTAA---------------------------A-----------GA-----------------AGTAAAAGCAAAGAAAAAG------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGTAAAAA-AAAA-----GTATTTAATAATT---------------------------TAAATAGCCAA--------A-AATG--------------------AGAGG---GGAAATCTGAAGAAGAGGAAGCAGCG-C--TGCGT------------------------TGC-------------AGTG
dm3 chr2L:9698620-9698882 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAGAGAGATCGCAGA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATCAACT-------------------CGC----ACACATACACACAC------GC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAAGCAAAGGAAATG------A-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTATTTAATAATT---------------------------AAAATAGGCGA--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAAAGGAAGCAGCA-C--TGCGT------------------------AAC---------------AG
droSim2 2l:9381503-9381765 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCACTGAAGAGAGATCGCAGA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATTAACT-------------------CGC----GCACATACACACAC------GC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGGAAATG------A-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTATTTAATAATT---------------------------AAAATAGGCGA--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAGAGGAAGCAGCA-C--TGCGT------------------------AAC---------------AG
droSec2 scaffold_3:5146203-5146465 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAGAGAGATCGCAGA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATTAACT-------------------CGC----ACACATACACACAC------GC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGAAAATG------A-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTATTTAATAATT---------------------------AAAATAGGCGA--------A-AATG--------------------AAAGG---GAATGCGCGAGGAAGAGGAAGCAGCA-C--TGCGT------------------------AAC---------------AG
droYak3 2L:12385634-12385911 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAGAGAGATCGCAAA--AGTAAA----CCCAGAAGCGCATACATATGCAC-------------------------ATCAACT-------------------CGC----ACACATACACACAT------GA--AC----A--C--CAG------TA-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGGAAATGAAAATGAAA------------AAAACAGAAGCCAAACCAAA--------------------------------------------------------------------ACGGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------AAAATAGGCAA--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAGAGGAAGCAGCG-C--TGCGT------------------------AAC--------AGTG-CGTG
droEre2 scaffold_4929:10312012-10312294 - AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTACGAAGAGAGCGCCGAAAAGAGATCGCAAA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATTAACT-------------------CGC----ACACATGCACACACACACACGC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGGAAATGAAAATGA-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------AAAATAGGCTG--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAGAGGAAGCAGCA-C--TGCGT------------------------AAC--------AGTG-CGTG
dp5 4_group3:471176-471314 + AATTTAA-------AGTATG-CA------------------C-------------------------------------GAATATG-----------------------CCAAAGCAAAGATGTAAAA-TATTCA----ACCAGAAGCGCAGACACACAGAC-------------------------GCATAC-ACAGCAACAGCGTGACACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----GTGTTTGCCAGTG---------------------------TGAGTGTGT-----------------------------------------------------------------------------------------------GTGAGTGAGTT--------AATG-AGTG
droPer2 scaffold_1:1946831-1946966 + AATTTAA-------AGTATG-CA------------------C-------------------------------------GAATATG-----------------------CCAAAGCAAAGATGTAAAA-TATTCA----ACCAGAAGCGCAGACACACAGAC-------------------------GCATAC-ACAGCAACAGCGTGACACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----GTGTTTGCCAGTG---------------------------TGAGT-------------------------------------------------------------------------------GTGT----------------GTGAGTGAATT--------AAT----GA
droWil2 scf2_1100000004521:9082366-9082658 + GCAAAAA-------ATTCAT--------------------------------------------------------------------------TATACAAAAA-----------GAAGAAT--------TTTAAATAAAGAAAATGTGTATAA---AACAC-------------------------ACAGACT-------------------CAC----AAACACACACGCAT------AC--AG----A-----AAG------TA-AT-------------------------------GGCAA---------------------------A-----------GTAAAAAGT-----------GCAAAGGCAAGGAAAAGT-------------AAAACAAAATAACAAAAA------GA------A--TTAATTTA--------------------------G--TAAATGA----------------------GCAAAAAGAAAA-----ATGTCTGATAATTAGAAATT------TT-----CTTAATTTTAAAAGGCAG--------A-AAAG--------------------AAAATT--TTAAACT---GTATGTAGAAGCAACAAC--TGCGTGTGAGTGTGACTGTGTGAGAGTGTATG--------TGTG-TGTG
droVir3 scaffold_12723:4222914-4223348 - AATTGAA-------AATACAGCAAAA--AATAGAAAAG-CA--AATACCAATAAAACACAAGCGACAAAGCAAACAGC-AAATGTAGAGAAGTGTATACCAAAA-----------GCAGAGCGTAAAAAAGTCCA----ACCAGAAACGCACACAGCCACAGATACACATGCACACGCATACACCACACAAACT-------------------CGT----ACTCATACACACAC------AC--AC----A--CACATT------TA-CACTTACACATACACATTACGTATACACGCTTACACAAAGTAAATGAGCGCAAA-GCAATTGCGAA-----------AAAACAAGT-----------GCAAAACCAAAAGC-------------AAATGAG--------------ACAAAAGCAAAACACA--GTGAACGT--------------------------G--TGTAAAAGCAGAACGCAA--ACGCACAG--CG-----AAAA-----AGATTTAATAATT---AATTTAATGCTTT-CGGCTCGAGTTT---------AGAGCAGAA-GACAAAAGTTCT-----------C-----ACT-----------TAG-----------CTGGC------------------------AGCTGATGC--------GAT-TGCG
droMoj3 scaffold_6500:14453494-14453893 + AATTTAA-------AATACAGCGAAGACAATTGAGAAGACAAAAATA---------------CGACGAAGCAAACTGAAAAATGTAGAGAAGTGTATACCAAAAG-----------CAGAGCGTAAAAAAATCCA----ACCAGAAACGTACACACACATCC-------------------------AAATACC--------TT---------TGCTTACACTCGCACACACAC------AC--AT----ACAG--AGA------TAAAC------------------GGCTAAACGCGTATACAAAGTAAATGAGCGCAAAGGCAATTGCGA----------------------------------------------AAAA------G-A------------AAAACAAGTGCAAAAGCAAAACACA--GTCTATGTGTGTGTGAATCTGTATTGGTGCGTGTGAGTGC-A------AATGCAA--ACG--------CAAAG-CGAA-----AGATTTAATAATT---AATTTAATGCTTT--AGCTTGAGTTT---------AGCTGCGAA-GACAAAAGTGCT-----------C-----ACT-----------GAG-----------CTGGC------------------------AGCTGATGCAGCTGCTATTG-GGT-
droGri2 scaffold_15252:3451397-3451746 + AAAATAA-------AGCAAG-CT------------------GA--------------------AAAAAAACAGACTGCAAAATGTAGAGAAGTGTATACCAAAA-----------GCAGAGCGTAAAAAAGTCCA----ACCAGAAATGCACACAGACACAG---------------------------CGATA-------------------CAT----ACACACACACACAC------GC--AT----A--C--GCG------CG-TA-------------------------------TACAAAGTAAATGAGCGCAAAAGCAATTGCGAGAAGAGAAAAAAAACACAAGT-----------GCAA------AAGT-------------AAATGAG--------------ACAAAAGCAAAACACACTGTGAATGT--------------------------GAATGC-AAAGCAAAAGGCAAA-ACGCACAGCG---------CA-----AGATTTAATAATT---AATTTAATGCTTTTTAGCTTT--------AGTCA---------------AATGTTCTCGT--------C-----ACT-----------GAG-----------CTGGC------------------------AGCTGATGCAGCTGCGAATGATGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAAAATGT---AGTGACAGTGTAGAG---GCCGAAACGAGAGCGCAAA--AGTGTC----CCCAGAA-CGCACACA------------------------------------------------------------------------CACACAC------AC--AC----A--G--CAGAAGAAATA-AA-------------------------------AGCAA---------------------------A-----------G-------TGCGAAGACAAAGCAAAAGCGAAGAAAATC------A-----------------ACAGAA------------------------------------------------------------AAG-AAAAGGCGA--A--AACGGTGCCAA-----AA-----GTATTTAATAATTTAAAATT--------------------TAAATAGACAG----AA--G-AAGA--------------------AGAAG---AAGAGGACAAGGAGGAGGAGGCCAC------------------------------------C--------ATTG-TGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGACAAGGAGGAGGA............................................................1811.001010000
....................................................................................................................................................................................................................................................................AGAAATA-AA-------------------------------AGCAA---------------------------A-----------G-------TGCGAA.......................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................................................................................................................................CACACA------------------------------------------------------------------------CACACAC------AC--AC----A--G--CA............................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061010000
.........................................................................................................................................................................................................................................................................................................................................................................CAAAGCAAAAGCGAAGACC..................................................................................................................................................................................................................................................................................................................19200.051010000
droBip1
AATTTAAAAAAAAAAGTGTG-CG--------------------------------------------------------AAACATAT---AGTGACAGTGGAGAGAG-GCCAAAACGAGAGCGCAAAAGTG-TCC----CCCAGAA-C--AAACACAC----------------------------------------------------------------------ACACAT------ACATAAGCCTATAA--AAA------AAAAC-------------------------------CTCAA---------------------------A-----------G-------TGCGAAGACAAAGCA----------AAAAG------A-A------------AAAGCAAAAATCAACTGA--------------------------------------------------AAAGAAAAAGGCAAAAA--AACGGTGCCAA-----AA-----GTATTTAATAATTTAAAATT--------------------TAAATAGACAG--------AGAGTG--------------------ATCTT---GGTGGAGTGAAGAAGAGGAGGCAAC--C--AGCCA------------------------GCC--------ATTG-TGCGSizeHit CountTotal NormTotal
No Reads
droKik1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTAGAAAAGTGCCTGCGAAGAGAGCGCAAAAGCGAGATTGCAAA--AACTAA----ACCAGAAGCGCACACGCACACAC-------------------------ACA-------GCAACAGTGTGACACTCGC----GCACCTACACA-------------------------------------AG-------------------------------CGTAA---------------------------A-----------G-------T-----------GCAAAGGCAAAACGCTCAA--------AAATAAAACGAAAACACAA--------------AAAA--ATAAACAA--------------------------A--AACAAAAGCAAAAGGCAACAA--GACGGTGCCAA-----AA-----GTATTTAATAATT---------------------------TAAATAGACAG--------A-AATC------TTTGTGGGACGTG-AGAAA---G--------AAGAAGAAGAAGCAACAAATATGCGT--------------GTGCGGGTGTAAC--------AGTG-TGCGSizeHit CountTotal NormTotal
No Reads
droFic1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTAAAAAGAGAGGGCGAA--AATTAA----ACCAGAAGCGCATACATATACAG-------------------------AAACACT-------------------CGC----GCACCTACACACAC------AC--AC----T--T--GAG------TG-AA-------------------------------TGTAA---------------------------A-----------GA-----------------AGTAAAGGCAAAAGGAA--------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------TAAATAGACAA--------A-AATG--------------------AGAGG---GA-GGTAAAAGGAAGAAGAAGCTAAA-C--TGCGT-----------------------------------------GTGSizeHit CountTotal NormTotal
No Reads
droEle1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTA-AAAGAGATCGCAAA--ATTTAA----ACCAGAAGCGCATACACATACAC-------------------------CTACACT-------------------CGC----GCACGTACACACAA------AC--AC----ACAG--AAT------CA-AA-------------------------------TGTAA---------------------------A-----------AA-----------------AGCAAAGT------AAAAG------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------TCA--AGACAA--------A-AATG--------------------AGAGA---GAAAATGAA---AAGAAGAAGCAGAA-C--TGCGT----------------GCG---------------------GGTGSizeHit CountTotal NormTotal
No Reads
droRho1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTAAAAGGAGATCGCAAA--AATTAA----ACCAGAAGCGCATACACATACAC-------------------------CTACACT-------------------TGC----GCACGTACACACAC----------------A--C--AAG------TG-AA-------------------------------TGTAA---------------------------A-----------GA-----------------AGCAAAGTCAAAG------------A-A------------AAATCAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAAAAAAA-----GTATTTAATAATT---------------------------TAAATAGACAA--------A-AATG--------------------AGAGA---GAAAAT----AAAAGAAGAAGCAGAA-C--TGCGT----------------GCG---------------------AGTGSizeHit CountTotal NormTotal
No Reads
droBia1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCCGAGGAGAGATCGCAAA---ATAAA----ACCA---ACGCACACACATGCAC-------------------------ATTAACT-------------------CGC----GCACACACACACAG--GCGCGC--AC----T--C--AAG------TG-AA----------TGTAAAA--------------TGTAA---------------------------A-----------GA-----------------AGCAAAGGCAAGGGAAATG------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCGAAAA--AGC-----GTATTTAATAATT---------------------------TAAATAGACAG--------A-AATG--------------------AGCGG---GAGGGGGAGAGGAAGA---GGCAGCA-G--TGCGT--------------------------------------G-CGAGSizeHit CountTotal NormTotal
No Reads
droTak1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAAAGAGATCGCTGA--AATCAA----ACCAGAAGCGCATACACATGCAC-------------------------GTAAACT-------------------CGC----GCACACACACACGC----GCGC--AC----T--C--GAG------TG-AA-------------------------------TGTAA---------------------------A-----------GA-----------------AGCAAAGGCAGAGAAAATGA-----A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGCCAAAA-AAAAGAAGCGTATTTAATAATT---------------------------TAAATAGACAA--------A-ACTG--------------------AGAGG---GAAAATGCGAAGAAGA---GGCAGCA-G--TG---------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droEug1
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTAAAAAGAGATCACAAA--AATTAA----ACCAGAAGCGCATACACATGCAC-------------------------ATAAACT-------------------TGC----GCACATACACGCAC----ACGC--AC----A--C--AAG------TG-TA-------------------------------TGTAA---------------------------A-----------GA-----------------AGTAAAAGCAAAGAAAAAG------A-A------------AAAACAGAAGCCAAAGCAAAAGA------------------------------------------------------------------CAGTGTAAAAA-AAAA-----GTATTTAATAATT---------------------------TAAATAGCCAA--------A-AATG--------------------AGAGG---GGAAATCTGAAGAAGAGGAAGCAGCG-C--TGCGT------------------------TGC-------------AGTGSizeHit CountTotal NormTotal
No Reads
dm3
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAGAGAGATCGCAGA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATCAACT-------------------CGC----ACACATACACACAC------GC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAAGCAAAGGAAATG------A-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTATTTAATAATT---------------------------AAAATAGGCGA--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAAAGGAAGCAGCA-C--TGCGT------------------------AAC---------------AGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................AAGTGCCTGCGAAGAGAGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GAAAAGTGCCTGCGAAGAGAGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000
...........................................................................................GTGCCTGCGAAGAGAGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................GCTGAAGAGAGATCGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCGAGGAAAAGGAAGC.........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CATACATATGCAC-------------------------ATCAACT-------------------CG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................GAAGAGAGCGCTGAAGAGAGATCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA--------A-AATG--------------------AGAGG---GAATGCGCG......................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
..............................................................................................................................................AGAAGCGCATACATATGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GAAAAGTGCCTGCGAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000
..............AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---GAATGCGCGAGGAA.................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................AAATGTGGAAAAGTGCCTGCGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATG--------------------AGAGG---GAATGCGCGA.....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATG--------------------AGAGG---GAATGCGCGAG....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------AGAGG---GAATGCGCGAGGAAA................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ATACATATGCAC-------------------------ATCAACT-------------------CGC----A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AATGTGGAAAAGTGCCTGCGAAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCAA---------------------------A-----------GA-----------------AGCAAAAGCAAAGGAAATG------A-.......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................CG--------------------------------------------------------AAATGTGGAAAAGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AAGAGAGCGCTGAAGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................AATGTGGAAAAGTGCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GTGGAAAAGTGCCTGCGAAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTA.........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AAAGTGCCTGCGAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAAG..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGAAAAGGAAGCAGCA-C--TG...............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AGCGCATACATATGCAC-------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GTGCCTGCGAAGAGAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TAA-------AGTGTG-CG--------------------------------------------------------AAATGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCGA--------A-AATG--------------------AGAGG---GAATG..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------A-AATG--------------------AGAGG---GAATGCGCG......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AGCGCTGAAGAGAGATCGCAGA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AAAGTGCCTGCGAAGAGAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCGA--------A-AATG--------------------AGAGG---GA.............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................................AGAGAGCGCTGAAGAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---GAATGCGCGAGGAAAA...............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AAAAGTGCCTGCGAAGAGAGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGA.............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AAGCAAAGGAAATG------A-A------------AA........................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................C----ACACATACACACAC------GC--AC----A--C--C.............................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AAAGTGCCTGCGAAGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
droSim2
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCACTGAAGAGAGATCGCAGA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATTAACT-------------------CGC----GCACATACACACAC------GC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGGAAATG------A-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTATTTAATAATT---------------------------AAAATAGGCGA--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAGAGGAAGCAGCA-C--TGCGT------------------------AAC---------------AGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................AAGAGAGCACTGAAGAGAGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00330000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----GTATTTAATAATT---------------------------AAAATAGGC...........................................................................................................................2412.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT---------------------------AAAATAGGCGA--------A-AATG--------------------AGAGG---G..............................................................................2511.00100010000000000000
.............................................................................................................................GA--AGTAAA----ACCAGAAGCGCATACATATGCAA-------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.00100000000000001000
droSec2
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAGAGAGATCGCAGA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATTAACT-------------------CGC----ACACATACACACAC------GC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGAAAATG------A-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA---AA-----GTATTTAATAATT---------------------------AAAATAGGCGA--------A-AATG--------------------AAAGG---GAATGCGCGAGGAAGAGGAAGCAGCA-C--TGCGT------------------------AAC---------------AGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTGCGAAGAGAGCGCTGAAGAGAGATCGCAAA--AGTAAA----CCCAGAAGCGCATACATATGCAC-------------------------ATCAACT-------------------CGC----ACACATACACACAT------GA--AC----A--C--CAG------TA-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGGAAATGAAAATGAAA------------AAAACAGAAGCCAAACCAAA--------------------------------------------------------------------ACGGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------AAAATAGGCAA--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAGAGGAAGCAGCG-C--TGCGT------------------------AAC--------AGTG-CGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................ATACATATGCAC-------------------------ATCAACT-------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------A-AATG--------------------AGAGG---GAATGCGCGAGGA..................................................................2511.00100000010000
........................................................................................AAAGTGCCTGCGAAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGAAGCCAAACCAAA--------------------------------------------------------------------..................................................................................................................................................................................................1911.00100100000000
.........................................................................................AAGTGCCTGCGAAGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.11101000000000
droEre2
AATTTAA-------AGTGTG-CG--------------------------------------------------------AAATGTGGAAAAGTGCCTACGAAGAGAGCGCCGAAAAGAGATCGCAAA--AGTAAA----ACCAGAAGCGCATACATATGCAC-------------------------ATTAACT-------------------CGC----ACACATGCACACACACACACGC--AC----A--C--CAG------TG-AA-------------------------------CGCAA---------------------------A-----------GA-----------------AGCAAAGGCAAAGGAAATGAAAATGA-A------------AAAACAGAAGCCAAAGCAAA--------------------------------------------------------------------ACGGTGCCAAAA-AAAA-----GTATTTAATAATT---------------------------AAAATAGGCTG--------A-AATG--------------------AGAGG---GAATGCGCGAGGAAGAGGAAGCAGCA-C--TGCGT------------------------AAC--------AGTG-CGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................TACGAAGAGAGCGCCGAAAAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGG---GAATGCGCGAGGAAGAGGAA...........................................................2511.0010000010
dp5
AATTTAA-------AGTATG-CA------------------C-------------------------------------GAATATG-----------------------CCAAAGCAAAGATGTAAAA-TATTCA----ACCAGAAGCGCAGACACACAGAC-------------------------GCATAC-ACAGCAACAGCGTGACACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----GTGTTTGCCAGTG---------------------------TGAGTGTGT-----------------------------------------------------------------------------------------------GTGAGTGAGTT--------AATG-AGTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AATTTAA-------AGTATG-CA------------------C-------------------------------------GAATATG-----------------------CCAAAGCAAAGATGTAAAA-TATTCA----ACCAGAAGCGCAGACACACAGAC-------------------------GCATAC-ACAGCAACAGCGTGACACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----GTGTTTGCCAGTG---------------------------TGAGT-------------------------------------------------------------------------------GTGT----------------GTGAGTGAATT--------AAT----GASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GCAAAAA-------ATTCAT--------------------------------------------------------------------------TATACAAAAA-----------GAAGAAT--------TTTAAATAAAGAAAATGTGTATAA---AACAC-------------------------ACAGACT-------------------CAC----AAACACACACGCAT------AC--AG----A-----AAG------TA-AT-------------------------------GGCAA---------------------------A-----------GTAAAAAGT-----------GCAAAGGCAAGGAAAAGT-------------AAAACAAAATAACAAAAA------GA------A--TTAATTTA--------------------------G--TAAATGA----------------------GCAAAAAGAAAA-----ATGTCTGATAATTAGAAATT------TT-----CTTAATTTTAAAAGGCAG--------A-AAAG--------------------AAAATT--TTAAACT---GTATGTAGAAGCAACAAC--TGCGTGTGAGTGTGACTGTGTGAGAGTGTATG--------TGTG-TGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AATTGAA-------AATACAGCAAAA--AATAGAAAAG-CA--AATACCAATAAAACACAAGCGACAAAGCAAACAGC-AAATGTAGAGAAGTGTATACCAAAA-----------GCAGAGCGTAAAAAAGTCCA----ACCAGAAACGCACACAGCCACAGATACACATGCACACGCATACACCACACAAACT-------------------CGT----ACTCATACACACAC------AC--AC----A--CACATT------TA-CACTTACACATACACATTACGTATACACGCTTACACAAAGTAAATGAGCGCAAA-GCAATTGCGAA-----------AAAACAAGT-----------GCAAAACCAAAAGC-------------AAATGAG--------------ACAAAAGCAAAACACA--GTGAACGT--------------------------G--TGTAAAAGCAGAACGCAA--ACGCACAG--CG-----AAAA-----AGATTTAATAATT---AATTTAATGCTTT-CGGCTCGAGTTT---------AGAGCAGAA-GACAAAAGTTCT-----------C-----ACT-----------TAG-----------CTGGC------------------------AGCTGATGC--------GAT-TGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................AAAAAGTCCA----ACCAGAAACGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................A--GTGAACGT--------------------------G--TGTAAAAGCAGA..............................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................CGTAAAAAAGTCCA----ACCAGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...............................AGAAAAG-CA--AATACCAATAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................T----ACTCATACACACAC------AC--AC----T--.................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
AATTTAA-------AATACAGCGAAGACAATTGAGAAGACAAAAATA---------------CGACGAAGCAAACTGAAAAATGTAGAGAAGTGTATACCAAAAG-----------CAGAGCGTAAAAAAATCCA----ACCAGAAACGTACACACACATCC-------------------------AAATACC--------TT---------TGCTTACACTCGCACACACAC------AC--AT----ACAG--AGA------TAAAC------------------GGCTAAACGCGTATACAAAGTAAATGAGCGCAAAGGCAATTGCGA----------------------------------------------AAAA------G-A------------AAAACAAGTGCAAAAGCAAAACACA--GTCTATGTGTGTGTGAATCTGTATTGGTGCGTGTGAGTGC-A------AATGCAA--ACG--------CAAAG-CGAA-----AGATTTAATAATT---AATTTAATGCTTT--AGCTTGAGTTT---------AGCTGCGAA-GACAAAAGTGCT-----------C-----ACT-----------GAG-----------CTGGC------------------------AGCTGATGCAGCTGCTATTG-GGT-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATCTGTATTGGTGCGTGTGA...........................................................................................................................................................................................................................2411.001000001
droGri2
AAAATAA-------AGCAAG-CT------------------GA--------------------AAAAAAACAGACTGCAAAATGTAGAGAAGTGTATACCAAAA-----------GCAGAGCGTAAAAAAGTCCA----ACCAGAAATGCACACAGACACAG---------------------------CGATA-------------------CAT----ACACACACACACAC------GC--AT----A--C--GCG------CG-TA-------------------------------TACAAAGTAAATGAGCGCAAAAGCAATTGCGAGAAGAGAAAAAAAACACAAGT-----------GCAA------AAGT-------------AAATGAG--------------ACAAAAGCAAAACACACTGTGAATGT--------------------------GAATGC-AAAGCAAAAGGCAAA-ACGCACAGCG---------CA-----AGATTTAATAATT---AATTTAATGCTTTTTAGCTTT--------AGTCA---------------AATGTTCTCGT--------C-----ACT-----------GAG-----------CTGGC------------------------AGCTGATGCAGCTGCGAATGATGTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:35 PM