ID:

dan_901

 Coordinate:

scaffold_12943:965288-965345 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.9 -3.6 -3.4

Flybase annnotation

CDS [Dana\GF22774-cds]; CDS [Dana\GF22774-cds]; exon [dana_GLEANR_705:4]; exon [dana_GLEANR_705:3]; intron [Dana\GF22774-in]

No Repeatable elements found

mature
  1. scaffold_2050:1192-1217 -
  2. scaffold_2050:1382-1407 -
  3. scaffold_2051:930-955 -
  4. dan_900  scaffold_12943:965172-965197 +
  5. dan_901  scaffold_12943:965299-965324 +
  6. dan_3143  scaffold_13340:17421437-17421462 +
star

Sense Strand Reads

##################################################----------------------------------------------------------##################################################
CATTGCCGCCACAGCAGGCTCCATTGCCGCCACAGCAGGCTCCATTGCAGGTAAGCCATCCCACACACCAAACTAGAGGCTCTTACTTACTCACTTTTTCATCGGCAGATTCCGCAACAGCAGGCTCCTTTGCCGCAACAACCGGATCCATTGCCGCA
**************************************************...((((.((...............))))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V106
head
..............................................................................................................TCCGCAACAGCAGGCTCCTTTGCCGC...................... 26 0 2 4.50 9 0 9 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCCGC........................................... 28 0 2 4.50 9 5 4 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACC......................................................................................... 26 0 6 3.33 20 11 9 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCC............................................. 26 0 3 2.00 6 3 3 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACA........................................................................................... 24 0 6 1.83 11 11 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCAC.............................................................................................. 21 0 6 1.83 11 1 8 2 0 0
...........................................ATTGCAGGTAAGCCATCCCACA............................................................................................. 22 0 6 1.83 11 10 1 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACAC.......................................................................................... 25 0 6 1.83 11 9 2 0 0 0
......CGCCACAGCAGGCTCCATTGCCGC................................................................................................................................ 24 0 20 1.75 35 10 24 1 0 0
.......................................CTCCATTGCAGGTAAGCCATCCC................................................................................................ 23 0 6 1.67 10 5 5 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACT....................................................................... 26 0 6 1.67 10 10 0 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCCG............................................ 27 0 2 1.50 3 3 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCC................................................................................................. 22 0 6 1.50 9 3 6 0 0 0
......CGCCACAGCAGGCTCCATTGCCG................................................................................................................................. 23 0 20 1.45 29 29 0 0 0 0
......CGCCACAGCAGGCTCCATTGCC.................................................................................................................................. 22 0 20 1.40 28 3 25 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGAT................................................ 24 0 3 1.33 4 2 1 0 1 0
.......................................................................................TACTCACTTTTTCATCGGCAGATT............................................... 24 0 3 1.33 4 3 1 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCCA............................................................................................... 24 0 6 1.33 8 7 1 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACAC............................................................................................ 23 0 6 1.33 8 5 3 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCT........................................................................... 26 0 6 1.33 8 8 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTC............................................................................ 25 0 6 1.17 7 4 3 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCT........................................................................... 25 0 6 1.00 6 6 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTT.......................................................................... 23 0 6 1.00 6 5 1 0 0 0
...............................................................................CTCTTACTTACTCACTTTTTCATCGG..................................................... 26 0 3 1.00 3 3 0 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGATTC.............................................. 26 0 3 1.00 3 3 0 0 0 0
.....................................................................................................................................CGCAACAACCGGATCCATTGCCGC. 24 0 6 1.00 6 5 1 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGA................................................. 23 0 3 1.00 3 1 2 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGG........................................................................................................... 24 0 6 1.00 6 6 0 0 0 0
................................................................................................................CGCAACAGCAGGCTCCTTTGCCGC...................... 24 0 2 1.00 2 0 2 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCT............................................................................. 24 0 6 1.00 6 3 3 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCCGCA.......................................... 29 0 2 1.00 2 2 0 0 0 0
..................CTCCATTGCCGCCACAGCAGGCTC.................................................................................................................... 24 0 20 0.85 17 2 14 1 0 0
..................................................................................................................................TGCCGCAACAACCGGATCCATTGC.... 24 0 6 0.83 5 4 1 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTTACT....................................................................... 27 0 6 0.67 4 4 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGG............................................................................... 22 0 6 0.67 4 2 2 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTC.............................................. 25 0 3 0.67 2 2 0 0 0 0
...................................................................................TACTTACTCACTTTTTCATCGGCAGA................................................. 26 0 3 0.67 2 1 1 0 0 0
...........................................ATTGCAGGTAAGCCATCCC................................................................................................ 19 0 6 0.67 4 0 2 2 0 0
..................................................................................................................................TGCCGCAACAACCGGATCCATTG..... 23 0 6 0.67 4 4 0 0 0 0
...................................................................................TACTTACTCACTTTTTCATCGGCAGAT................................................ 27 0 3 0.67 2 1 1 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACCA........................................................................................ 27 0 6 0.67 4 4 0 0 0 0
..................................................................................................................................TGCCGCAACAACCGGATCCATTGCCGC. 27 0 6 0.67 4 3 1 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGA................................................. 22 0 3 0.67 2 1 1 0 0 0
.......................................CTCCATTGCAGGTAAGCCATC.................................................................................................. 21 0 6 0.67 4 2 1 1 0 0
.....CCGCCACAGCAGGCTCCATTGC................................................................................................................................... 22 0 20 0.55 11 0 11 0 0 0
......CGCCACAGCAGGCTCCATTGC................................................................................................................................... 21 0 20 0.55 11 11 0 0 0 0
..........................CCGCCACAGCAGGCTCCATTGC.............................................................................................................. 22 0 20 0.55 11 0 11 0 0 0
...........................CGCCACAGCAGGCTCCATTGC.............................................................................................................. 21 0 20 0.55 11 11 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCCACA............................................................................................. 26 0 6 0.50 3 3 0 0 0 0
..............................................................................................................TCCGCAACAGCAGGCTCCTTTG.......................... 22 0 2 0.50 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAG............................................................................................................ 23 0 6 0.50 3 2 1 0 0 0
........................................................................................................GGAGATTCCGCAACAGCAGGCTC............................... 23 1 2 0.50 1 0 1 0 0 0
................................................................................................................CGCAACAGCAGGCTCCTTTGCC........................ 22 0 2 0.50 1 0 1 0 0 0
..................................................................................................................................TGCCGCAACAACCGGATCCATTGCCG.. 26 0 6 0.50 3 2 0 1 0 0
............................................................................................................................TTCCTTTGCCGCAACAACCGGATC.......... 24 1 2 0.50 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACCAA....................................................................................... 28 0 6 0.50 3 3 0 0 0 0
.......................................CGCCATTGCAGGTAAGCCATC.................................................................................................. 21 1 6 0.50 3 0 3 0 0 0
......................................................................................................TTGCAGATTCCGCAACAGCAGGCTCC.............................. 26 2 2 0.50 1 0 1 0 0 0
...................................................................................................................................GCCGCAACAACCGGATCCATTGCCGC. 26 0 6 0.50 3 2 0 1 0 0
..................................................................................................................CAACAGCAGGCTCCCTTGCCGCAACAACC............... 29 1 2 0.50 1 0 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTTA......................................................................... 27 0 6 0.50 3 3 0 0 0 0
.....................................................................................................TCGGCAGATTCCGCAACAGCAGGCTCCT............................. 28 0 2 0.50 1 1 0 0 0 0
.............................................................................................................TTCCGCAACAGCAGGCTCC.............................. 19 0 2 0.50 1 1 0 0 0 0
............................................................................................................CTTCCGCAACAGCAGGCTCCTTTGC......................... 25 1 2 0.50 1 0 1 0 0 0
...................................................................................................................AACAGCAGGCTCCTTTGCCGCAACAACC............... 28 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................GCCGCAACAACCGGATCCATTGC.... 23 0 6 0.50 3 3 0 0 0 0
...................................................................................................................AACAGCAGGCTCCTTTGCCGCAAC................... 24 0 2 0.50 1 0 1 0 0 0
.............................................................................................................................TCCTTTGCCGCAACAACCGGATCCATT...... 27 0 2 0.50 1 1 0 0 0 0
..............................................................................................................TGCGCAACAGCAGGCTCCTTTGCC........................ 24 1 2 0.50 1 0 1 0 0 0
...........................................................................................................GATTCCGCAACAGCAGGCTCCTTTGC......................... 26 0 2 0.50 1 0 1 0 0 0
.................................................................................................TTCATCGGCAGATTCCGCAACAGCAGGC................................. 28 0 2 0.50 1 0 1 0 0 0
...........................................................................................................GATTCCGCAACAGCAGGC................................. 18 0 2 0.50 1 1 0 0 0 0
............................................TTGCAGGTAAGCCATCCCACACA........................................................................................... 23 0 6 0.50 3 3 0 0 0 0
.......................................................................................TGCTCACTTTTTCATCGGCAGATTCCGC........................................... 28 1 2 0.50 1 0 1 0 0 0
...................................................................................................................AACAGCAGGCTCCTTTGCCGCAACAA................. 26 0 2 0.50 1 1 0 0 0 0
.....................................................AGCCATCCCACACACCAAACTAGAGGC.............................................................................. 27 0 6 0.50 3 1 2 0 0 0
........................................................................................................GTAGATTCCGCAACAGCAGGC................................. 21 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................CCTTTGCCGCAACAACCGGATCCATTG..... 27 0 2 0.50 1 1 0 0 0 0
........................................TCCATTGCAGGTAAGCCATCCCACAC............................................................................................ 26 0 6 0.50 3 1 2 0 0 0
.............................................................................................................................TCCTTTGCCGCAACAACCG.............. 19 0 2 0.50 1 0 0 1 0 0
............................................TTGCAGGTAAGCCATCCCACACACC......................................................................................... 25 0 6 0.50 3 1 2 0 0 0
....................................................................................................ATCGGCAGATTCCGCAACAGC..................................... 21 0 2 0.50 1 1 0 0 0 0
................................................................................................TGTCATCGGCAGATTCCGCAACAGCAGG.................................. 28 1 2 0.50 1 0 1 0 0 0
................................................................................................................................TTTGCCGCAACAACCGGATCCATTG..... 25 0 2 0.50 1 1 0 0 0 0
........................................................................................ACTCACTTTTTCATCGGCAGATTCCGC........................................... 27 0 2 0.50 1 1 0 0 0 0
................................................................................................................CGCAACAGCAGGCTCCTTTGC......................... 21 0 2 0.50 1 0 1 0 0 0
...........................................................................................CACTTTTTCATCGGCAGATTCCGC........................................... 24 0 2 0.50 1 0 1 0 0 0
..............................................................................................................TGCGCAACAGCAGGCTCCTTTGCCGC...................... 26 1 2 0.50 1 0 1 0 0 0
................................................................................................................................TTTGCCGCAGCAACCGGATCCATTGCC... 27 1 2 0.50 1 1 0 0 0 0
..............................................................................................................TCCGCAACAGCAGGCTCCTTTGCCGT...................... 26 1 2 0.50 1 0 1 0 0 0
..................................................................................................TCATCGGCAGATTCCGCAACAGC..................................... 23 0 2 0.50 1 1 0 0 0 0
............................................................................................................................CTCCTTTGCCGCAACAACCGGA............ 22 0 2 0.50 1 1 0 0 0 0
.................................................................................................TTCATCGGCAGATTCCGCAACAGC..................................... 24 0 2 0.50 1 1 0 0 0 0
......CGCCACAGCAGGCTCCATTGCCGCC............................................................................................................................... 25 0 20 0.40 8 0 8 0 0 0
..................CTCCATTGCCGCCACAGCAGGCTCC................................................................................................................... 25 0 20 0.40 8 0 8 0 0 0
......CGCCACAGCAGGCTCCATTGCCGCCA.............................................................................................................................. 26 0 20 0.35 7 7 0 0 0 0
.........CACAGCAGGCTCCATTGCCGCC............................................................................................................................... 22 0 20 0.35 7 3 4 0 0 0
.................................................................................CTTACTTACTCACTTTTTCATCGGCA................................................... 26 0 3 0.33 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGC.............................................................................. 23 0 6 0.33 2 1 1 0 0 0
............................GCCACAGCAGGCTCCATTGCAGG........................................................................................................... 23 0 6 0.33 2 2 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGGCAGA................................................. 27 0 3 0.33 1 1 0 0 0 0
..............................................................................GCTCTTACTTACTCACTTTTTCATCGG..................................................... 27 0 3 0.33 1 1 0 0 0 0
...........................................AGTGCAGGTAAGCCATCCCACAC............................................................................................ 23 1 6 0.33 2 0 2 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTTA......................................................................... 28 0 6 0.33 2 2 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAGC...................................................................................................... 26 0 6 0.33 2 1 1 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTTAC........................................................................ 24 0 6 0.33 2 2 0 0 0 0
......................................................................................TGACTCACTTTTTCATCGGCAGATTCC............................................. 27 1 3 0.33 1 0 1 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGAT................................................ 23 0 3 0.33 1 1 0 0 0 0
..........................................CATTGCAGGTAAGCCATCCC................................................................................................ 20 0 6 0.33 2 0 2 0 0 0
...................................................................................TACTTACTCACTTTTTCATCGGC.................................................... 23 0 3 0.33 1 0 1 0 0 0
..................................................................................TGACTTACTCACTTTTTCATCGG..................................................... 23 1 3 0.33 1 0 1 0 0 0
...................................................................................................................................GCCGCAACAACCGGATCCATTGCCG.. 25 0 6 0.33 2 2 0 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGATTCC............................................. 27 0 3 0.33 1 1 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGG..................................................... 23 0 3 0.33 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTC............................................................................ 21 0 6 0.33 2 2 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGGC.................................................... 24 0 3 0.33 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTTA......................................................................... 25 0 6 0.33 2 1 1 0 0 0
......................................................................................TGACTCACTTTTTCATCGGCAGAT................................................ 24 1 3 0.33 1 0 1 0 0 0
.......................................................................................................................................CAACAACCGGATCCATTGCCG.. 21 0 6 0.33 2 2 0 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTTACTA...................................................................... 26 1 6 0.33 2 2 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTCT........................................................................... 22 0 6 0.33 2 2 0 0 0 0
...................................................................................................................................GCCGCAACAACCGGATCCATTGCCGCA 27 0 6 0.33 2 2 0 0 0 0
...........................................ATTGCAGGTAAGCCATCC................................................................................................. 18 0 6 0.33 2 0 2 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGTA......................................................................................................... 26 0 6 0.33 2 2 0 0 0 0
.................................................................CACCAAACTAGAGGCTCTTACTTAC.................................................................... 25 0 6 0.33 2 2 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGGCA................................................... 25 0 3 0.33 1 1 0 0 0 0
......................................................................................................................................GCAACAACCGGATCCATTGCCGC. 23 0 6 0.33 2 1 1 0 0 0
...........................................AGTGCAGGTAAGCCATCC................................................................................................. 18 1 6 0.33 2 0 2 0 0 0
...................................................TAAGCCATCCCACACACCAAACTAGAGG............................................................................... 28 0 6 0.33 2 0 2 0 0 0
.......................................................................................................................................CAACAACCGGATCCATTGCCGC. 22 0 6 0.33 2 1 1 0 0 0
........................................................................................ACTCACTTTTTCATCGGCAGATTCC............................................. 25 0 3 0.33 1 0 1 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAG....................................................................................................... 25 0 6 0.33 2 2 0 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCCAC........................................... 28 1 3 0.33 1 0 1 0 0 0
..................................................................................TGATTTACTCACTTTTTCATCGGC.................................................... 24 2 3 0.33 1 0 1 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGATT............................................... 25 0 3 0.33 1 1 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTAC........................................................................ 25 0 6 0.33 2 2 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACTTA..................................................................... 28 0 6 0.33 2 2 0 0 0 0
......CTCCACAGCAGGCTCCATTGCCGC................................................................................................................................ 24 1 20 0.30 6 0 6 0 0 0
........CCACAGCAGGCTCCATTGCCGC................................................................................................................................ 22 0 20 0.30 6 1 5 0 0 0
.................GCTCCATTGCCGCCACAGCAGGCTC.................................................................................................................... 25 0 20 0.30 6 0 6 0 0 0
..................CTCCATTGCCGCCACAGCAGGCT..................................................................................................................... 23 0 20 0.25 5 3 2 0 0 0
......................ATTGCCGCCACAGCAGGCTCC................................................................................................................... 21 0 20 0.20 4 1 3 0 0 0
.................GCTCCATTGCCGCCACAGCAGGCTCCA.................................................................................................................. 27 0 20 0.20 4 4 0 0 0 0
.ATTGCCGCCACAGCAGGCTCC........................................................................................................................................ 21 0 20 0.20 4 1 3 0 0 0
......................ATTGCCGCCACAGCAGGCTCCATTGCAGA........................................................................................................... 29 1 5 0.20 1 0 1 0 0 0
.......................................CGACATTGCAGGTAAGCCATC.................................................................................................. 21 2 6 0.17 1 0 1 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTTA......................................................................... 23 0 6 0.17 1 1 0 0 0 0
..............................................................ACACACCAGACTAGAGGCTCTT.......................................................................... 22 1 6 0.17 1 1 0 0 0 0
............................GCCACAGCAGGCTCCATTGCAGGTAAG....................................................................................................... 27 0 6 0.17 1 0 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGC.............................................................................. 22 0 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGG............................................................................... 19 0 6 0.17 1 1 0 0 0 0
...........................CGCCACAGGAGGCTCCATTGCAGGTAT........................................................................................................ 27 2 6 0.17 1 1 0 0 0 0
.............................................TGCAGGTAAGCCATCCCACACACCAA....................................................................................... 26 0 6 0.17 1 0 1 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTT.......................................................................... 22 0 6 0.17 1 1 0 0 0 0
...........................CGCCACAGGAGGCTCCATTGCAGGT.......................................................................................................... 25 1 6 0.17 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGT........................................................................................................... 24 1 6 0.17 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGT.......................................................................................................... 22 0 6 0.17 1 0 1 0 0 0
......................................................................................................................................GCAACAACCGGATCCATTGCC... 21 0 6 0.17 1 0 1 0 0 0
..................................................................ACCAAACTAGAGGCTCTTACTTAC.................................................................... 24 0 6 0.17 1 0 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTT.......................................................................... 26 0 6 0.17 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGT.......................................................................................................... 25 0 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCT........................................................................... 23 0 6 0.17 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAG................................................................................ 21 0 6 0.17 1 1 0 0 0 0
..................................................................................................................................TCCCGCAACAACCGGATCCATTGCCG.. 26 1 6 0.17 1 1 0 0 0 0
......................................................................................................................................GCAACAACGGGATCCATTGCCGC. 23 1 6 0.17 1 1 0 0 0 0
.........................................CCATTGCAGGTAAGCCATCCCA............................................................................................... 22 0 6 0.17 1 1 0 0 0 0
...........................CGCCACAGTAGGCTCCATTGCAGGT.......................................................................................................... 25 1 6 0.17 1 1 0 0 0 0
...........................CTCCACAGCAGGCTCCATTGCAGG........................................................................................................... 24 1 6 0.17 1 0 1 0 0 0
............................GCCACAGCAGGCTCCATTGCAGGTAA........................................................................................................ 26 0 6 0.17 1 1 0 0 0 0
................................CAGCAGGCTCCATTGCAGGTAAGC...................................................................................................... 24 0 6 0.17 1 1 0 0 0 0
.................................................................................................................................TTGCCGCAACAACCGGATCCATTGC.... 25 0 6 0.17 1 1 0 0 0 0
.............................................................CAAACACCAACCTAGAGGCTCT........................................................................... 22 2 6 0.17 1 0 1 0 0 0
......................................................................................................................................GCAACAACTGGATCCATTGCCGC. 23 1 6 0.17 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTA......................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
.........................................CCATTGCAGGCAAGCCATCCCACACAC.......................................................................................... 27 1 6 0.17 1 1 0 0 0 0
.............................CCACAGCAGGCTCCATTGCAGGTA......................................................................................................... 24 0 6 0.17 1 1 0 0 0 0
...........................................ATCGCAGGTAAGCCATCCCACAC............................................................................................ 23 1 6 0.17 1 0 1 0 0 0
..........................................................TCCCACACACCAAACGAGAGGCTCTTACT....................................................................... 29 1 6 0.17 1 1 0 0 0 0
...................................................................................................................................GCCGCAACGACCGGATCCATTGCCG.. 25 1 6 0.17 1 1 0 0 0 0
........................................................CATCCCACACACCAAACTAGAGGCT............................................................................. 25 0 6 0.17 1 0 1 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCACAC.............................................................................................. 25 1 6 0.17 1 1 0 0 0 0
..........................................................TCCTACACACCAAACTAGAGGC.............................................................................. 22 1 6 0.17 1 0 1 0 0 0
...........................................................CCCACACACCAAACTAGAGGCTCT........................................................................... 24 0 6 0.17 1 1 0 0 0 0
.......................................................................................................................................CAACAACCGGATCCATTGCCGCA 23 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGGAAGCCATCCCACACA........................................................................................... 24 1 6 0.17 1 1 0 0 0 0
............................................................CCACACACTAAACTAGAGGCTCTTA......................................................................... 25 1 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTTACTT...................................................................... 28 0 6 0.17 1 1 0 0 0 0
.......................................................CGATCCCACACACCAAACTAGAGGCC............................................................................. 26 2 6 0.17 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACA....................................................................... 26 1 6 0.17 1 1 0 0 0 0
..................................................................................................................................TGCCGCAACAACCGGATCCATTGCC... 25 0 6 0.17 1 0 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTTAC........................................................................ 28 0 6 0.17 1 1 0 0 0 0
...........................CTCCACAGCAGGCTCCATTGCAGGT.......................................................................................................... 25 1 6 0.17 1 0 1 0 0 0
.......................................GTCCATTGCAGGTAAGCCATCCC................................................................................................ 23 1 6 0.17 1 1 0 0 0 0
........................................TCCATTGCTGGTAAGCCATCCCACACA........................................................................................... 27 1 6 0.17 1 1 0 0 0 0
.........................................CCATTGCAGGTAAGCCATCCCACACAC.......................................................................................... 27 0 6 0.17 1 1 0 0 0 0
........................................................................................................................................AACAACCGGATCCATTGC.... 18 0 6 0.17 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTT.......................................................................... 27 0 6 0.17 1 1 0 0 0 0
..........................................CATTGCAGGTAAGCCATCCCACACA........................................................................................... 25 0 6 0.17 1 1 0 0 0 0
.........................................................ATCTCACACACCAAACTAGAGGCT............................................................................. 24 1 6 0.17 1 0 1 0 0 0
........................................................................................................................................AACAACCGCATCCATTGCCGC. 21 1 6 0.17 1 1 0 0 0 0
..................................................................................................................................TTCCGCAACAACCGGATCCATTGCCGC. 27 1 6 0.17 1 0 1 0 0 0
..............................CACAGCAGGCTCCATTGCAGG........................................................................................................... 21 0 6 0.17 1 1 0 0 0 0
..............................................GCAGGTAAGCCATCCCACACACCAA....................................................................................... 25 0 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTC............................................................................ 24 0 6 0.17 1 1 0 0 0 0
.................................................................CACCAAACTAGAGGCTCTTACTT...................................................................... 23 0 6 0.17 1 1 0 0 0 0
...............................................CAGGTAAGCCATCCCACACACCAAACT.................................................................................... 27 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACA......................................................................................... 26 1 6 0.17 1 1 0 0 0 0
.................................................................CACCAAACTAGAGGCTCTTACT....................................................................... 22 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATACCACACA........................................................................................... 24 1 6 0.17 1 1 0 0 0 0
............................................TTGCAGGGAAGCCATCCCACAC............................................................................................ 22 1 6 0.17 1 0 0 1 0 0
............................................................CCACACACCAAACTAGAGGC.............................................................................. 20 0 6 0.17 1 0 0 0 1 0
...................................................................................................................................GCCGCAACAACCGGATCCATTGCC... 24 0 6 0.17 1 1 0 0 0 0
..........................................AATTGCAGGTAAGCCATCCCACACACC......................................................................................... 27 1 6 0.17 1 1 0 0 0 0
........................................................................................................................................AACTACCGGATCCATTGCCGC. 21 1 6 0.17 1 0 1 0 0 0
...........................................ATTGCAGGAAAGCCATCCCACA............................................................................................. 22 1 6 0.17 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTA.......................................................................... 27 1 6 0.17 1 1 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTA......................................................................... 24 0 6 0.17 1 0 1 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGTT......................................................................................................... 26 1 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTT.......................................................................... 24 0 6 0.17 1 1 0 0 0 0
...............................................CAGGTAAGCCATCCCACACACC......................................................................................... 22 0 6 0.17 1 0 1 0 0 0
...........................................ATTGCAGGGAAGGCATCCCACACACC......................................................................................... 26 2 6 0.17 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAGCC..................................................................................................... 27 0 6 0.17 1 0 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTTACT....................................................................... 29 0 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTTAG........................................................................ 26 1 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCA............................................................................................... 20 0 6 0.17 1 0 0 0 1 0
.................................................................................................................................TTGCCGCAACAACCGGATCCATTGCCGC. 28 0 6 0.17 1 1 0 0 0 0
...................................................................................................................................GCCGCAACAACCGGATCCAT....... 20 0 6 0.17 1 1 0 0 0 0
..........................................CATTGCAGGTAAGCCATCCCACACACC......................................................................................... 27 0 6 0.17 1 0 1 0 0 0
........................................................................................................................................AACAACCGGATCCATTGCCGC. 21 0 6 0.17 1 1 0 0 0 0
..................................................................................................................................TGCCGCAACAACCGGATCCATT...... 22 0 6 0.17 1 1 0 0 0 0
.........................................................ATCTCACACACCAAACTAGAGGCC............................................................................. 24 2 6 0.17 1 0 1 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTT............................................................................ 25 1 6 0.17 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGATT........................................................................................................ 27 3 6 0.17 1 1 0 0 0 0
............................GCCACAGCAGGCTCCATTGCAT............................................................................................................ 22 1 6 0.17 1 1 0 0 0 0
.......................................CGCCATTGCAGGTAAGCCATCC................................................................................................. 22 1 6 0.17 1 0 1 0 0 0
...........................CGCCACAGGAGGCTCCATTGCAGGTAA........................................................................................................ 27 1 6 0.17 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAGCCA.................................................................................................... 28 0 6 0.17 1 1 0 0 0 0
............................................TTGCAGGAAAGCCATCCCACACACC......................................................................................... 25 1 6 0.17 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACTTAC.................................................................... 29 0 6 0.17 1 0 1 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTTAC........................................................................ 29 0 6 0.17 1 1 0 0 0 0
.......................................CGCTATTGCAGGTAAGCCATCC................................................................................................. 22 2 6 0.17 1 0 1 0 0 0
...............................................................CACACCAAACTAGAGGCTCTTAA........................................................................ 23 1 6 0.17 1 0 0 1 0 0
.........................................................ATCTCACACACCAAACTAGAGGCTC............................................................................ 25 1 6 0.17 1 0 1 0 0 0
.......................................................CCATCCCAGACACCAAACTAGAGGCTCT........................................................................... 28 1 6 0.17 1 1 0 0 0 0
......................................................GCCATCCCACACACCAAACTAGAGGC.............................................................................. 26 0 6 0.17 1 0 1 0 0 0
...........................................................CCCACACACCAAACTAGAGGCTCTT.......................................................................... 25 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACGCACCA........................................................................................ 27 1 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACGCCAAACTAGAGGCTCT........................................................................... 25 1 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGGAAGCCATCCCACACAC.......................................................................................... 25 1 6 0.17 1 1 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCCACAC............................................................................................ 27 0 6 0.17 1 1 0 0 0 0
..............................................GCAGGTAAGCCATCCCACACACC......................................................................................... 23 0 6 0.17 1 0 1 0 0 0
...........................................ATTGCAGGCAAGCCATCCCACACACCAAA...................................................................................... 29 1 6 0.17 1 1 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCTTCAC................................................................................................ 23 2 6 0.17 1 0 1 0 0 0
.............................................TGCAGGTAAGCCATCCCAC.............................................................................................. 19 0 6 0.17 1 0 1 0 0 0
..............................CACAGCAGCCTCCATTGCAGGTA......................................................................................................... 23 1 6 0.17 1 1 0 0 0 0
.............................................TGCAGGTAAGCCATCCCACACACC......................................................................................... 24 0 6 0.17 1 1 0 0 0 0
...........................................................CCCACACACCAAACTAGAGGCTCTTACT....................................................................... 28 0 6 0.17 1 1 0 0 0 0
......................AGTGCCGCCACAGCAGGCTCC................................................................................................................... 21 1 20 0.15 3 0 3 0 0 0
.............................CCACAGCAGGCTCCATTGC.............................................................................................................. 19 0 20 0.15 3 1 2 0 0 0
.........CACAGCAGGCTCCATTGCCGC................................................................................................................................ 21 0 20 0.15 3 0 3 0 0 0
..............CAGGCTCCATTGCCGCCACAGCAGG....................................................................................................................... 25 0 20 0.15 3 2 1 0 0 0
CATTGCCGCCACAGCAGGCTCC........................................................................................................................................ 22 0 20 0.15 3 3 0 0 0 0
...TGCCGCCACAGCAGGCTCCATTGC................................................................................................................................... 24 0 20 0.15 3 2 1 0 0 0
.....................CATTGCCGCCACAGCAGGCTCC................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0
........CCACAGCAGGCTCCATTGC................................................................................................................................... 19 0 20 0.15 3 1 2 0 0 0
.AGTGCCGCCACAGCAGGCTCC........................................................................................................................................ 21 1 20 0.15 3 0 3 0 0 0
........CCACAGCAGGCTCCATTGCCGCC............................................................................................................................... 23 0 20 0.15 3 2 1 0 0 0
..................CTCCATTGCCGCCACAGCA......................................................................................................................... 19 0 20 0.15 3 2 1 0 0 0
......................................................GCCATCCAACACACCAAACTAGAG................................................................................ 24 1 7 0.14 1 0 1 0 0 0
...................................................................CCAAACTAGAGGCTCTTACT....................................................................... 20 0 7 0.14 1 1 0 0 0 0
....................................................................CAAACTAGAGGCTCTTACTTACTCA................................................................. 25 0 7 0.14 1 1 0 0 0 0
.......................................................................................................................................CAACAACCGGATCCATTGAC... 20 1 7 0.14 1 0 1 0 0 0
...........................................ATTGCAGGAAAACCATCCC................................................................................................ 19 2 7 0.14 1 0 0 1 0 0
.....................................................AGCCATCCAACACACCAAACTAGAGGCT............................................................................. 28 1 7 0.14 1 1 0 0 0 0
....................................................................CAAACTAGAGGCTCTTACT....................................................................... 19 0 7 0.14 1 1 0 0 0 0
...........................................................................GAGGCTCTTACTTACTCACT............................................................... 20 0 8 0.13 1 0 1 0 0 0
..............CAGGCTCCATTGCCGCCACAGCA......................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0
......CGCTACAGCAGGCTCCATTGCCGC................................................................................................................................ 24 1 20 0.10 2 0 2 0 0 0
......CGCCACAGCAGGCTCCATTGCCGCCT.............................................................................................................................. 26 1 20 0.10 2 1 1 0 0 0
...TGCCGCCACAGCAGGCTCCATTG.................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0
........................TGCCGCCACAGCAGGCTCCATTG............................................................................................................... 23 0 20 0.10 2 2 0 0 0 0
..................CTCCATTGCCGCCACAGCAGGC...................................................................................................................... 22 0 20 0.10 2 0 2 0 0 0
.................GCTCCATTGCCGCCACAGCAGG....................................................................................................................... 22 0 20 0.10 2 1 0 0 0 1
...................TCCATTGCCGCCACAGCAGGCTCC................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0
......CGCCACAGCAGGCTCCATTGCCGCCAA............................................................................................................................. 27 1 20 0.10 2 2 0 0 0 0
.......GCCACAGCAGGCTCCATTGCCGCCAC............................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0
........................TGCCGCCACAGCAGGCTCCATTGC.............................................................................................................. 24 0 20 0.10 2 2 0 0 0 0
..................CTCCATTGCCGCCACAGCAGG....................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0
......CGCCACAGCAGGCTCCATTGCCGT................................................................................................................................ 24 1 20 0.10 2 2 0 0 0 0
...................TCCATTGCCGCCACAGCAGGCTCCATT................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
....................CCATTGCCGCCACAGCAGGCTCCATT................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0
.................GCTCCATTGCCGCCACAGCAGGCTCC................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.......................................................................................................................................CAACAACCAGATCCATTGCCGCA 23 1 14 0.07 1 1 0 0 0 0
........................................................................CTAGAGACTCTTTCTGACTC.................................................................. 20 3 17 0.06 1 0 1 0 0 0
............................................................................................................................CGCCATTGCCGCAACAACC............... 19 2 18 0.06 1 0 1 0 0 0
..TTGCCGCCACAGCAGGCTCCATTGCCGCC............................................................................................................................... 29 0 18 0.06 1 1 0 0 0 0
..TTCCCGCCACAGCAGGCTCCATTGCC.................................................................................................................................. 26 1 18 0.06 1 0 1 0 0 0
...TGCCGCCACAGCAGGCTCCATTGCC.................................................................................................................................. 25 0 18 0.06 1 0 1 0 0 0
...TGCCGCCAGAGCAGGCTCCATTGCCGT................................................................................................................................ 27 2 18 0.06 1 1 0 0 0 0
..TGGCCGCCACAGCAGGCTCCATTGCCGC................................................................................................................................ 28 1 18 0.06 1 0 1 0 0 0
...TGACGCCACAGCAGGCTCCATTGCCGCC............................................................................................................................... 28 1 18 0.06 1 0 1 0 0 0

Anti-sense strand reads

GTAACGGCGGTGTCGTCCGAGGTAACGGCGGTGTCGTCCGAGGTAACGTCCATTCGGTAGGGTGTGTGGTTTGATCTCCGAGAATGAATGAGTGAAAAAGTAGCCGTCTAAGGCGTTGTCGTCCGAGGAAACGGCGTTGTTGGCCTAGGTAACGGCGT
**************************************************...((((.((...............))))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
 V055
head
.............................GGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 24 0 6 26.67 160 134 21 2 2 1 0
....CGGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 24 0 18 13.28 239 39 199 0 1 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGGCCT............ 25 0 2 12.00 24 3 21 0 0 0 0
..........................GGCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 27 0 6 12.00 72 62 8 2 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 23 0 6 8.33 50 43 6 1 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTTGGCCT............ 27 0 2 8.00 16 15 0 1 0 0 0
.........................CGGCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 28 0 5 6.80 34 11 22 1 0 0 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTTGGCCT............ 26 0 2 6.50 13 13 0 0 0 0 0
...........................................................................................................................CGAGGAAACGGCGTTGTTGGCCT............ 23 0 2 6.50 13 5 5 1 2 0 0
............................CGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 25 0 6 5.67 34 30 2 2 0 0 0
....CGGCGGTGTCGTCCGAGGTAACG................................................................................................................................... 23 0 20 4.95 99 0 87 4 0 8 0
......................................CGAGGTAACGTCCATTCGGTAGGGT............................................................................................... 25 0 6 4.83 29 5 15 1 8 0 0
.........................CGGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 24 0 5 4.20 21 4 13 0 3 1 0
...................................................................GGTTTGATCTCCGAGAATGAATGAG.................................................................. 25 0 7 4.14 29 9 2 12 5 1 0
.........................................................................................................................CCCGAGGAAACGGCGTTGTTGGCCT............ 25 1 2 4.00 8 0 8 0 0 0 0
..............................................CGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 25 0 6 3.67 22 3 7 4 7 1 0
...............CCCGAGGTAACGGCGGTGTCGTCCG...................................................................................................................... 25 1 20 3.55 71 0 71 0 0 0 0
.....................................................................................................................GTCGTCCGAGGAAACGGCGTTGT.................. 23 0 2 3.50 7 7 0 0 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGGCC............. 24 0 2 3.50 7 2 5 0 0 0 0
..................................................................TGGTTTGATCTCCGAGAATGAATGAG.................................................................. 26 0 6 3.33 20 0 8 8 3 1 0
...............................TGTCGTCCGAGGTAACGTCCAT......................................................................................................... 22 0 6 3.33 20 12 6 2 0 0 0
...................................................................GGTTTGATCTCCGAGAATGAATGAGT................................................................. 26 0 7 3.29 23 16 2 4 1 0 0
.TAACGGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 27 0 18 3.06 55 40 15 0 0 0 0
.................................................................................................AAGTAGCCGTCTAAGGCGTTGTCGT.................................... 25 0 2 3.00 6 5 0 0 0 1 0
................CCGAGGTAACGGCGGTGTCTT......................................................................................................................... 21 1 20 2.55 51 0 51 0 0 0 0
..........................................................................................................................CCGAGGAAACGGCGTTGTTGGCC............. 23 0 2 2.50 5 1 4 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTTGG............... 24 0 2 2.50 5 4 1 0 0 0 0
...............................................GTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 24 0 6 2.50 15 7 2 1 3 2 0
..........................................................................................................................CCGAGGAAACGGCGTTGTTGGCCT............ 24 0 2 2.50 5 1 4 0 0 0 0
....CGGCGGTGTCGTCCGAGGTAACGGCG................................................................................................................................ 26 0 18 2.28 41 25 16 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 26 0 6 2.17 13 12 1 0 0 0 0
.............................GGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 23 0 6 2.17 13 13 0 0 0 0 0
..............................................CGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 24 0 6 2.17 13 4 1 5 3 0 0
...................................................................................................................................CGGCGTTGTTGGCCTAGGTAACGG... 24 0 6 2.17 13 0 7 5 1 0 0
...............CCCGAGGTAACGGCGGTGTCGT......................................................................................................................... 22 1 20 2.15 43 0 43 0 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGTT....................................................................................... 22 0 6 2.00 12 1 6 4 1 0 0
............................................AACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 26 0 6 2.00 12 8 3 1 0 0 0
.......................................GAGGTAACGTCCATTCGGTAGGGT............................................................................................... 24 0 6 2.00 12 4 1 0 7 0 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTTGGC.............. 24 0 2 2.00 4 4 0 0 0 0 0
....CGGCGGTGTCGTCCGAGGTAACTG.................................................................................................................................. 24 1 18 1.94 35 0 35 0 0 0 0
.......................................................................TGATCTCCGAGAATGAATGAGTGAA.............................................................. 25 0 7 1.86 13 3 6 3 1 0 0
..........................GGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 23 0 6 1.83 11 5 2 4 0 0 0
................................GTCGTCCGAGGTAACGTCCAT......................................................................................................... 21 0 6 1.83 11 7 4 0 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGTTT...................................................................................... 23 0 6 1.83 11 1 8 1 0 1 0
.................................TCGTCCGAGGTAACGTCCAT......................................................................................................... 20 0 6 1.67 10 9 1 0 0 0 0
..........................................GTAACGTCCATTCGGTAGGGTGTGT........................................................................................... 25 0 6 1.67 10 10 0 0 0 0 0
........................................................................GATCTCCGAGAATGAATGAGTGAAA............................................................. 25 0 3 1.67 5 3 2 0 0 0 0
.......................................................................TGATCTCCGAGAATGAATGAGTGAAA............................................................. 26 0 3 1.67 5 1 3 1 0 0 0
..AACGGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 26 0 18 1.67 30 26 3 1 0 0 0
..............GTCCGAGGTAACGGGGGTGTCGT......................................................................................................................... 23 1 20 1.60 32 32 0 0 0 0 0
..AACGGCGGTGTCGTCCGAGGTAACG................................................................................................................................... 25 0 20 1.60 32 16 15 0 1 0 0
......................TAACGGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 27 0 5 1.60 8 4 4 0 0 0 0
....................................................................................................TAGCCGTCTAAGGCGTTGTCGTCCG................................. 25 0 2 1.50 3 3 0 0 0 0 0
................................................................................................AAAGTAGCCGTCTAAGGCGTTGTCGT.................................... 26 0 2 1.50 3 3 0 0 0 0 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTTGGCC............. 25 0 2 1.50 3 3 0 0 0 0 0
...........................................................................................................................CGAGGAAACGGCGTTGTTGGCCTAGGT........ 27 0 2 1.50 3 3 0 0 0 0 0
...................................................................................................GTAGCCGTCTAAGGCGTTGTCGT.................................... 23 0 2 1.50 3 3 0 0 0 0 0
.....................................................................................................AGCCGTCTAAGGCGTTGTCGTCCGAG............................... 26 0 2 1.50 3 1 0 0 0 2 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTTGG............... 23 0 2 1.50 3 3 0 0 0 0 0
...................................................................................................GTAGCCGTCTAAGGCGTTGTCGTCC.................................. 25 0 2 1.50 3 3 0 0 0 0 0
..................................................................................................AGTAGCCGTCTAAGGCGTTGTCGT.................................... 24 0 2 1.50 3 2 0 1 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGGC.............. 23 0 2 1.50 3 0 3 0 0 0 0
....................................................................................................TAGCCGTCTAAGGCGTTGTCGTCC.................................. 24 0 2 1.50 3 2 0 0 1 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTTGGCC............. 26 0 2 1.50 3 3 0 0 0 0 0
..............................................................................................................................GGAAACGGCGTTGTTGGCCTAGGT........ 24 0 2 1.50 3 2 0 1 0 0 0
.....................................................................................................AGCCGTCTAAGGCGTTGTCGTCCG................................. 24 0 2 1.50 3 3 0 0 0 0 0
.....................................................................................................................GTCGTCCGAGGAAACGGCGTTGTTGG............... 26 0 2 1.50 3 3 0 0 0 0 0
......................................................................TTGATCTCCGAGAATGAATGAGTGAA.............................................................. 26 0 7 1.43 10 3 6 0 1 0 0
...........................................TAACGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 28 0 6 1.33 8 3 1 2 1 1 0
...............................................................GTGTGGTTTGATCTCCGAGAATGAAT..................................................................... 26 0 6 1.33 8 3 0 5 0 0 0
.........................................GGTAACGTCCATTCGGTAGGGTGTGT........................................................................................... 26 0 6 1.33 8 7 0 1 0 0 0
............................CGGTGTCGTCCGAGGTAACGT............................................................................................................. 21 0 6 1.33 8 4 4 0 0 0 0
...........................................TAACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 27 0 6 1.33 8 4 0 3 1 0 0
...............................................GTCCATTCGGTAGGGTGTGTGGT........................................................................................ 23 0 6 1.33 8 4 1 3 0 0 0
.TAACGGCGGTGTCGTCCGAGGTAACG................................................................................................................................... 26 0 20 1.20 24 22 0 2 0 0 0
......................................CGAGGTAACGTCCATTCGGTAGGGTGT............................................................................................. 27 0 6 1.17 7 4 3 0 0 0 0
..................................CGTCCGAGGTAACGTCCAT......................................................................................................... 19 0 6 1.17 7 3 3 0 0 0 1
............................................................GGTGTGTGGTTTGATCTCCGAGAAT......................................................................... 25 0 6 1.17 7 4 0 1 2 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAATGAG.................................................................. 28 0 6 1.17 7 0 2 4 1 0 0
.............................................................GTGTGTGGTTTGATCTCCGAGAAT......................................................................... 24 0 6 1.17 7 1 1 1 3 1 0
............................................AACGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 27 0 6 1.17 7 4 1 2 0 0 0
.............................GGTGTCGTCCGAGGTAACGTCCATT........................................................................................................ 25 0 6 1.17 7 6 1 0 0 0 0
.........................CGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 22 0 20 1.15 23 3 19 0 0 1 0
.TAACGGCGGTGTCGTCCGAGGTAAC.................................................................................................................................... 25 0 20 1.10 22 0 22 0 0 0 0
......................TAACGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 26 0 20 1.10 22 22 0 0 0 0 0
.............................................ACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 25 0 6 1.00 6 0 1 2 3 0 0
..................................................................................................................GTTGTCGTCCGAGGAAACGGCGTTGT.................. 26 0 2 1.00 2 2 0 0 0 0 0
...............................................................................................AAAAGTAGCCGTCTAAGGCGTTGTCGT.................................... 27 0 2 1.00 2 2 0 0 0 0 0
....................................................................................................................TGTCGTCCGAGGAAACGGCGTTTT.................. 24 1 2 1.00 2 0 2 0 0 0 0
...........................................................................................................................CGAGGAAACGGCGTTGTTGGCC............. 22 0 2 1.00 2 0 2 0 0 0 0
.........................................................................................................................CCCGAGGAAACGGCGTTGTTGGCC............. 24 1 2 1.00 2 0 2 0 0 0 0
................................................TCCATTCGGTAGGGTGTGTGGTTT...................................................................................... 24 0 6 1.00 6 1 4 0 1 0 0
.............................GGTGTCGTCCGAGGTAACGTC............................................................................................................ 21 0 6 1.00 6 1 5 0 0 0 0
.................................................................................................................CGTTGTCGTCCGAGGAAACGGCGTTGT.................. 27 0 2 1.00 2 2 0 0 0 0 0
..................................................................................................AGTAGCCGTCTAAGGCGTTGTCGTCCG................................. 27 0 2 1.00 2 2 0 0 0 0 0
......................................................................................................................TCGTCCGAGGAAACGGCGTTGT.................. 22 0 2 1.00 2 0 1 1 0 0 0
...............................................................................................................GGCGTTGTCGTCCGAGGAAACGGCGT..................... 26 0 2 1.00 2 2 0 0 0 0 0
.......................AACGGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 26 0 5 1.00 5 3 1 1 0 0 0
.................................................................................................................CGTTGTCGTCCGAGGAAACGGCGTT.................... 25 0 2 1.00 2 2 0 0 0 0 0
.............................................................................................................................AGGAAACGGCGTTGTTGGCCTAGGT........ 25 0 2 1.00 2 2 0 0 0 0 0
....................................................................................................................................GGCGTTGTTGGCCTAGGTAACGG... 23 0 6 1.00 6 4 0 2 0 0 0
...........................................................................................................CTAAGGCGTTGTCGTCCGAGGAAACG......................... 26 0 2 1.00 2 0 0 2 0 0 0
...................................................................................................................TTGTCGTCCGAGGAAACGGCGTTGT.................. 25 0 2 1.00 2 2 0 0 0 0 0
....................................................................................................................TGTCGTCCGAGGAAACGGCGTTGT.................. 24 0 2 1.00 2 2 0 0 0 0 0
..........................................GTAACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 28 0 6 1.00 6 5 0 1 0 0 0
.............................GGTGTCGTCCGAGGTAACGT............................................................................................................. 20 0 6 1.00 6 5 1 0 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGGACT............ 25 1 2 1.00 2 0 2 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTT................. 22 0 2 1.00 2 1 1 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGT.................. 21 0 2 1.00 2 1 1 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTTGGC.............. 25 0 2 1.00 2 1 1 0 0 0 0
................................................................................................................................AAACGGCGTTGTTGGCCTAGGT........ 22 0 2 1.00 2 1 1 0 0 0 0
..........................................................................................................................CCGAGGAAACGGCGTTGTTGGACT............ 24 1 2 1.00 2 0 2 0 0 0 0
.....................................CCGAGGTAACGTCCATTCGGTAGGGT............................................................................................... 26 0 6 0.83 5 2 3 0 0 0 0
.....................................................TCGGTAGGGTGTGTGGTT....................................................................................... 18 0 6 0.83 5 3 1 0 0 0 1
.......................................................GGTAGGGTGTGTGGTTTGAT................................................................................... 20 0 6 0.83 5 1 2 2 0 0 0
................................................TCCATTCGGTAGGGTGTGTGGTT....................................................................................... 23 0 6 0.83 5 1 1 2 0 1 0
.............................GGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 24 1 6 0.83 5 5 0 0 0 0 0
....CGGCGGTGTCGTCCGAGGTAACGGC................................................................................................................................. 25 0 18 0.72 13 7 6 0 0 0 0
..................................................................CGGTTTGATCTCCGAGAATGAATGAG.................................................................. 26 1 7 0.71 5 0 4 1 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGT........................................................................................ 21 0 6 0.67 4 1 2 0 1 0 0
...............................................GTCCATTCGGTAGGGTGTGTGGTTT...................................................................................... 25 0 6 0.67 4 2 0 0 2 0 0
.................................................................GTGGTTTGATCTCCGAGAATGAATGAG.................................................................. 27 0 6 0.67 4 2 0 2 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 22 0 6 0.67 4 4 0 0 0 0 0
....................................................................................TGAATGAGTGAAAAAGTAGCCGTCT................................................. 25 0 3 0.67 2 0 0 2 0 0 0
.............................................ACGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 26 0 6 0.67 4 1 1 1 1 0 0
..................................................................TGGTTTGATCTCCGAGAATGAATGAGT................................................................. 27 0 6 0.67 4 0 2 1 1 0 0
...........................................TAACGTCCATTCGGTAGGGTGTGT........................................................................................... 24 0 6 0.67 4 0 3 1 0 0 0
......................................................................TTGATCTCCGAGAATGAATGAGTGAAA............................................................. 27 0 3 0.67 2 1 1 0 0 0 0
............................CGGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 24 0 6 0.67 4 3 1 0 0 0 0
.............................................................................CCGAGAATGAATGAGTGAAAAAGTA........................................................ 25 0 3 0.67 2 0 1 1 0 0 0
......................................CGAGGTAACGTCCATTCGGTAGGTT............................................................................................... 25 1 6 0.67 4 0 4 0 0 0 0
.............................................ACGTCCATTCGGTAGGGTGTGT........................................................................................... 22 0 6 0.67 4 0 0 1 3 0 0
............................................................................TCCGAGAATGAATGAGTGAAATATT......................................................... 25 2 3 0.67 2 0 2 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGT............................................................................................................. 22 0 6 0.67 4 4 0 0 0 0 0
...............................................................................GAGAATGAATGAGTGAAAAAGTAGC...................................................... 25 0 3 0.67 2 0 1 1 0 0 0
...............TCCGAGGTAACGGCGGTGTCGTCGG...................................................................................................................... 25 1 20 0.65 13 0 13 0 0 0 0
.......CGGTGTCGTCCGAGGTAACTG.................................................................................................................................. 21 1 20 0.65 13 0 13 0 0 0 0
..AACGGCGGTGTCGTCCGAGGTAACGGCG................................................................................................................................ 28 0 18 0.61 11 8 3 0 0 0 0
.........................CGGCGGTGTCGTCCGAGGTAACTT............................................................................................................. 24 1 5 0.60 3 0 3 0 0 0 0
.........................CGGCGGTGTCGTCCGAGGTAACGTC............................................................................................................ 25 0 5 0.60 3 0 3 0 0 0 0
.CAACGGCGGTGTCGTCCGAGGTAACG................................................................................................................................... 26 1 20 0.60 12 0 12 0 0 0 0
....................................................................GTTTGATCTCCGAGAATGAATGAG.................................................................. 24 0 7 0.57 4 2 0 1 0 0 1
...................................................................GGTTTGATCTCCGAGAATGAATGAGTG................................................................ 27 0 7 0.57 4 2 0 2 0 0 0
..AACGGCGGTGTCGTCCGAGGTAACGGC................................................................................................................................. 27 0 18 0.56 10 10 0 0 0 0 0
GTAACGGCGGTGTCGTCCGAGGTAACG................................................................................................................................... 27 0 20 0.55 11 11 0 0 0 0 0
......................................................CGGTAGGGTGTGTGGTTTGAT................................................................................... 21 0 6 0.50 3 0 1 1 1 0 0
......................................................................................................GCCGTCTAAGGCGTTGTCGTCCGAGGAA............................ 28 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................CCCGAGGAAACGGCGTTGTTGGCGT............ 25 2 2 0.50 1 0 1 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTTGGCCTA........... 28 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................GTCCGAGGAAACGGCCTTGTTGGCCT............ 26 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................CCCGAGGAAACGGCGTTGTTGCCC............. 24 2 2 0.50 1 0 1 0 0 0 0
....................................................TTCGGTAGGGTGTGTGGTTT...................................................................................... 20 0 6 0.50 3 1 1 0 1 0 0
.....................................................................................................AGCCTTCTAAGGCTTTGTCGTCCG................................. 24 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................................AGGCGTTGTCGTCCGAGGAAACGG........................ 24 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................GTCCCAGGAAACGGCGTAGTTGGCCT............ 26 2 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................TCCGAGGAAACGGCTTTGTTGGCCT............ 25 1 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................GGAAACGGCGTTGTTGGCCTAGG......... 23 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................AGGAAACGGCGTTGTTGGCC............. 20 0 2 0.50 1 1 0 0 0 0 0
................................................TCCATTCGGTAGGGTGTGTGGT........................................................................................ 22 0 6 0.50 3 1 1 1 0 0 0
................................................................................................AAAGTAGCCGTCTAAGGCGTTGTCG..................................... 25 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGGCTT............ 25 1 2 0.50 1 0 1 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTAGTTGGCCT............ 27 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................GAAACGGCGTTGTTGGCCTAGGTAACG.... 27 0 2 0.50 1 1 0 0 0 0 0
....CAGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 24 1 18 0.50 9 0 9 0 0 0 0
..........................................................................................................................CCTAGGAAACGGCGTTGTTGGCCT............ 24 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................................GTCTAAGGCGTTGTCGTCCGAGG.............................. 23 0 2 0.50 1 0 0 1 0 0 0
...................................................................................................GTAGCCGTCTAAGGCGTTGTCCT.................................... 23 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GTATCCGTCTAAGGCGTTGTCGT.................................... 23 1 2 0.50 1 0 0 0 1 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAAT..................................................................... 25 0 6 0.50 3 1 1 1 0 0 0
.....................................................TCGGTAGGGTGTGTGGTTTGAT................................................................................... 22 0 6 0.50 3 2 0 1 0 0 0
...................................................................................................TTAGCCGTCTAAGGCGTTGTCGT.................................... 23 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................GCCGAGGAAACGGCGTTGTTGGCCT............ 25 1 2 0.50 1 0 1 0 0 0 0
...........................................................................................................................CGAGGAAACGGCGTTGTTGGCGT............ 23 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................................AGCCGTCTAAGGCGTTGTCGTCCGA................................ 25 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................AAACGGCGTTGTTGGCCTAGGTAA...... 24 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTTGGCA............. 25 1 2 0.50 1 1 0 0 0 0 0
......................................................................................................................TCGTCCGAGGAAACGGCGTTGTTGGCCT............ 28 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTG................... 20 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................CGCCCGAGAAAACGGCGTTGTTGG............... 24 2 2 0.50 1 0 0 0 1 0 0
..............................GTGTCGTCCGAGGTAACGT............................................................................................................. 19 0 6 0.50 3 3 0 0 0 0 0
...........................................................................................................CTAAGGCGTTGTCGTCCGAGGAAA........................... 24 0 2 0.50 1 0 0 1 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGGCCTA........... 26 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................GCCGTCTAAGGCGTTGTCGTCCG................................. 23 0 2 0.50 1 1 0 0 0 0 0
................................................................................................AAAGTAGCCGTCTAAGGCGTTGT....................................... 23 0 2 0.50 1 0 0 1 0 0 0
...................................................................................................GTAGCCGTCTAAGGCGTTGTCGTCCG................................. 26 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................CTTTGTCGTCCGAGGAAACGGCGT..................... 24 1 2 0.50 1 0 0 0 1 0 0
......................................................................................................................TCGTCCGAGGAGACGGCGTTGT.................. 22 1 2 0.50 1 0 0 1 0 0 0
.........................................................................................................................CCCGAGGAAACGGCGTTGTTGG............... 22 1 2 0.50 1 0 1 0 0 0 0
......................................................................................................................CCGTCCGAGGAAACGGCGTTGT.................. 22 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................................CGTTGTCGTCCGAGGAAACGGCGT..................... 24 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................CGTCTAAGGCGTTGTCGCCCGA................................ 22 1 2 0.50 1 0 1 0 0 0 0
............................CGGTGTCGTCCGAGGTAACGTC............................................................................................................ 22 0 6 0.50 3 2 1 0 0 0 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTT................. 21 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................ACGGCGTTGTTGGCCTAGGTAAC..... 23 0 6 0.50 3 2 0 1 0 0 0
.............................................................................................................AAGGCGTTGTCGTCCGAGGAAACG......................... 24 0 2 0.50 1 0 0 1 0 0 0
...................................................................................................................TTGTCGTCCGAGGAAACGGCGCTG................... 24 1 2 0.50 1 0 1 0 0 0 0
............................................................................................TGAAAAAGTAGCCGTCTAAGGCTTTGT....................................... 27 1 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................CGTCCTAGGAAACGGCGTTGTTGGC.............. 25 1 2 0.50 1 1 0 0 0 0 0
...........................................................................................................CTAAGTCGTTGTCGTCCGAGGAAAC.......................... 25 1 2 0.50 1 0 0 0 1 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTGTTGGACT............ 27 1 2 0.50 1 0 1 0 0 0 0
..........................................................................................................................CCGAGGAAACGGCGTTGTTGGC.............. 22 0 2 0.50 1 0 1 0 0 0 0
...............................................................................................................................GAAACGGCGTTGTTGGCCTAGGT........ 23 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................AGTAGCCGTCTAAGGCGTTGTCGTCC.................................. 26 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................CGAGGAAACGGCGTTGTTGGCCTA........... 24 0 2 0.50 1 0 0 1 0 0 0
...........................................................................................................................CGAGGAAACGGCGTTGTTGGC.............. 21 0 2 0.50 1 0 1 0 0 0 0
.................................................................................................AAGTAGCCGTCTAAGGCGTTGTCGTC................................... 26 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................GAAACGGCGTTGTTGGCCTAGGTAA...... 25 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................GTTGTCGTCCGAGGAAACGGCG...................... 22 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................GTTGTCGTCCGAGGAAACGGCGTTGTT................. 27 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................GTTGTCGTCCGAGGAAACGGCGT..................... 23 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................CGTTGTCGTCCGAGGAAACGCCG...................... 23 1 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................GGAAACGGCGTTGTTGGCCT............ 20 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................CGAGGAACCGGCGTTGTTGGCCT............ 23 1 2 0.50 1 0 0 1 0 0 0
................................................................................................................................AAACGGCGTTGTTGGCCTAGGTAACG.... 26 0 2 0.50 1 0 0 1 0 0 0
.....................................................................................................................GTCGTCCGAGGAAACGGTGTTGT.................. 23 1 2 0.50 1 1 0 0 0 0 0
................................................................................................................GCGTTGTCGTCCGAGGAAACGGCGTT.................... 26 0 2 0.50 1 1 0 0 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCATT........................................................................................................ 24 0 6 0.50 3 1 2 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGTTCTT................. 22 1 2 0.50 1 0 1 0 0 0 0
..........................GGCGGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 26 0 6 0.50 3 3 0 0 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTTGG............... 22 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................GTCCGAGGAAACGGCGTTGTTGGCCTAG.......... 28 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................AGTCCGAGGAAACGGCGTTGTTGGCCT............ 27 1 2 0.50 1 0 1 0 0 0 0
.........................................................................................................................TCCGAGGAAACGGCGTTGTCGGCCT............ 25 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................CGTCCGAGGAAACGGCGCTGTTGGCCT............ 27 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................................CCGTCTAAGGCGTTGTCGTCCGAGGAA............................ 27 0 2 0.50 1 1 0 0 0 0 0
.......................AACGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 24 0 20 0.45 9 0 3 4 2 0 0
.AAACGGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 27 1 18 0.44 8 5 3 0 0 0 0
....................................................................GTTTGATCTCCGAGAATGAATGAGTGA............................................................... 27 0 7 0.43 3 3 0 0 0 0 0
...................................................................GGTTTGATCTCCGAGAATGAATGA................................................................... 24 0 7 0.43 3 3 0 0 0 0 0
.....................AAAACGGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 28 2 5 0.40 2 2 0 0 0 0 0
........................TCGGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 25 1 5 0.40 2 0 1 1 0 0 0
......................TAACGGCGGTGTCGTCCGAGGTAACGTC............................................................................................................ 28 0 5 0.40 2 0 2 0 0 0 0
........................ACGGCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 29 0 5 0.40 2 2 0 0 0 0 0
...ACGGCGGTGTCGTCCGAGGTAACGGCG................................................................................................................................ 27 0 18 0.39 7 6 1 0 0 0 0
.TAACGGCGGTGTCGTCCGAGGTAACGGCG................................................................................................................................ 29 0 18 0.39 7 0 7 0 0 0 0
....CGGCGGTGTCGTCCGAGGTAAAGG.................................................................................................................................. 24 1 18 0.39 7 0 7 0 0 0 0
.................CGAGGTACCGGCGGTGTCGT......................................................................................................................... 20 1 20 0.35 7 0 0 0 7 0 0
.................CGAGGTAACGGCGGTGTCCTC........................................................................................................................ 21 1 20 0.35 7 0 7 0 0 0 0
....CGGCGGTGTCGTCCGAGGTAAC.................................................................................................................................... 22 0 20 0.35 7 0 0 0 7 0 0
...........ATCGTCCGAGGTAACGGCGGTGTCGT......................................................................................................................... 26 1 20 0.35 7 7 0 0 0 0 0
...............................................................GTGTGGTTTGATCTCCGAGAATGAA...................................................................... 25 0 6 0.33 2 0 0 2 0 0 0
GTAACGGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 28 0 18 0.33 6 5 1 0 0 0 0
....................................................................................................................................GGCGTTGTTGGCCTAGGTAACGGC.. 24 0 6 0.33 2 2 0 0 0 0 0
......................................................................................................................................CGTTGTTGGCCTAGGTAACGG... 21 0 6 0.33 2 2 0 0 0 0 0
..........................GGCGGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 27 1 6 0.33 2 2 0 0 0 0 0
...................................................................................................................................CGGCGTTGTTGGCCTAGGTAACGGCGT 27 0 6 0.33 2 2 0 0 0 0 0
.............................GGTGTCGTCCGAGGTCACGTCCAT......................................................................................................... 24 1 6 0.33 2 2 0 0 0 0 0
.......................................GAGGTAACGTCCATTCGGTAGGGTGTGT........................................................................................... 28 0 6 0.33 2 1 0 1 0 0 0
........................................................GTAGGGTGTGTGGTTTGATCT................................................................................. 21 0 6 0.33 2 0 2 0 0 0 0
.................................................................GTGGTTTGATCTCCGAGAATGAATG.................................................................... 25 0 6 0.33 2 0 1 1 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCATTCG...................................................................................................... 26 0 6 0.33 2 2 0 0 0 0 0
..............................................TGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 24 1 6 0.33 2 1 0 1 0 0 0
....................................................................................................................................GGCGTTGTTGGCCTAGGTAACGGCGT 26 0 6 0.33 2 2 0 0 0 0 0
..............................................................TGTGTGGTTTGATCTCCGAGAATGA....................................................................... 25 0 6 0.33 2 0 2 0 0 0 0
......................................................................TTGATCTCCGAGAATGGATGAGTGAAA............................................................. 27 1 3 0.33 1 0 0 1 0 0 0
...................................................................................................................................CGGCGTTGTTGGCCTAGGTAAC..... 22 0 6 0.33 2 1 1 0 0 0 0
.......................................................................CGATCTCCGAGAATGAATGAGAGAAA............................................................. 26 2 3 0.33 1 0 1 0 0 0 0
............................CGGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 25 1 6 0.33 2 2 0 0 0 0 0
.....................................................TCGGTAGGGTGTGTGGTTT...................................................................................... 19 0 6 0.33 2 2 0 0 0 0 0
.......................................................................TGATCTCCGAGAATGAATGAGGGAAA............................................................. 26 1 3 0.33 1 0 0 0 1 0 0
.................................................CCATTCGGTAGGGTGTGTGGTTTGATCT................................................................................. 28 0 6 0.33 2 2 0 0 0 0 0
...................................GTCCGAGGTAACGTCCAT......................................................................................................... 18 0 6 0.33 2 1 0 0 1 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAA...................................................................... 24 0 6 0.33 2 1 1 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGTC............................................................................................................ 23 0 6 0.33 2 1 1 0 0 0 0
.....................................................................................GAATGAGTGAAAAAGTAGCCGTCT................................................. 24 0 3 0.33 1 1 0 0 0 0 0
......................................TGAGGTAACGTCCATTCGGTAGGGT............................................................................................... 25 1 6 0.33 2 0 2 0 0 0 0
........................................AGGTAACGTCCATTCGGTAGGTT............................................................................................... 23 1 6 0.33 2 0 2 0 0 0 0
.............................GGTGTCGTCCGAGGTAACGTCC........................................................................................................... 22 0 6 0.33 2 2 0 0 0 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAATG.................................................................... 26 0 6 0.33 2 0 1 1 0 0 0
....CGGCGGTGTCGTCCGAGGTAACGGCGG............................................................................................................................... 27 0 18 0.33 6 3 3 0 0 0 0
....................................................TTCGGTAGGGTGTGTGGTTTGAT................................................................................... 23 0 6 0.33 2 1 1 0 0 0 0
...................................................ATTCGGTAGGGTGTGTGGTTTGAT................................................................................... 24 0 6 0.33 2 2 0 0 0 0 0
............................................................................TCCGAGAATGAATGAGTGAAAAATT......................................................... 25 1 3 0.33 1 0 1 0 0 0 0
........................................................................CATCTCCGAGAATGAATGAGTGAAA............................................................. 25 1 3 0.33 1 0 1 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 25 0 6 0.33 2 2 0 0 0 0 0
..........................................................AGGGTGTGTGGTTTGATCTCCGAGAAT......................................................................... 27 0 6 0.33 2 2 0 0 0 0 0
.................................................................................................................................AACGGCGTTGTTGGCCTAGGTAACGG... 26 0 6 0.33 2 2 0 0 0 0 0
.......................................................................CGATCTCCGAGAATGAATGAGTGAAA............................................................. 26 1 3 0.33 1 0 1 0 0 0 0
......................................................................ATGATCTCCGAGAATGAATGAGTGAAA............................................................. 27 1 3 0.33 1 0 1 0 0 0 0
..................................................CATTCGGTAGGGTGTGTGGTT....................................................................................... 21 0 6 0.33 2 1 1 0 0 0 0
................................GTCGTCCGAGGTAACGTCCATT........................................................................................................ 22 0 6 0.33 2 2 0 0 0 0 0
..............................................................TGTGTGGTTTGATCTCCGAGAAT......................................................................... 23 0 6 0.33 2 0 2 0 0 0 0
............................................................................CCCGAGAATGAATGAGTGAAA............................................................. 21 1 3 0.33 1 0 1 0 0 0 0
.......................................................................................ATGAGTGAAAAAGTAGCCGTCTAAG.............................................. 25 0 3 0.33 1 0 0 1 0 0 0
.........................CGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 23 0 20 0.30 6 0 0 0 6 0 0
............TCGTCCGAGGTAACGGGGGTGTCGT......................................................................................................................... 25 1 20 0.30 6 6 0 0 0 0 0
..AACGGCGGTGTCGTCCGAGGTAAC.................................................................................................................................... 24 0 20 0.30 6 3 3 0 0 0 0
................CCGAGGTAACGGCGGTGTCGTCC....................................................................................................................... 23 0 20 0.30 6 6 0 0 0 0 0
.................CGAGGTAACGGGGGTGTCGT......................................................................................................................... 20 1 20 0.30 6 5 0 1 0 0 0
................CCGAGGTAACGGCGGTGTTGTC........................................................................................................................ 22 1 20 0.30 6 0 6 0 0 0 0
.....GGCGGTGTCGTCCGAGGTAACTG.................................................................................................................................. 23 1 20 0.30 6 0 6 0 0 0 0
..................................CGTCCGAGGTGAGGTCCA.......................................................................................................... 18 2 17 0.29 5 0 4 0 0 0 1
........................................................................GATCTCCGAGAATGAATGAGTGAA.............................................................. 24 0 7 0.29 2 1 1 0 0 0 0
...................................................................GTTTTGATCTCCGAGAATGAATGAGT................................................................. 26 1 7 0.29 2 0 0 0 2 0 0
..........................................................................TCTCCGAGAATGAATGAGTGAA.............................................................. 22 0 7 0.29 2 0 1 0 1 0 0
......................................................................TTGATCTCCGAGAATGAAT..................................................................... 19 0 7 0.29 2 2 0 0 0 0 0
...ACGGCGGTGTCGTCCGAGGTAACGG.................................................................................................................................. 25 0 18 0.28 5 3 2 0 0 0 0
...ACGGCGGTGTCGTCCGAGGTAACGGC................................................................................................................................. 26 0 18 0.28 5 5 0 0 0 0 0
......................TAACGGCGGTGTCGTCCGAGGTTACG.............................................................................................................. 26 1 20 0.25 5 0 5 0 0 0 0
............................CGGTGTCGTCCGAGGTAACG.............................................................................................................. 20 0 20 0.25 5 0 5 0 0 0 0
.....................GTAACGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 27 0 20 0.25 5 0 0 5 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:965238-965395 + dan_901 CA-TTGC---CGCCACAGCAGGCTCCATTGCCGCCACAGCAGGCTCCATTGCAGGTA------------------A--------GCC-------ATCCCACACACCAAACTAGAGGCT---CTT-------------ACTTACTC------------------------ACTTTTTCATCGGCAGATTC---CGCAACAGCAGGCTCCTTTGCCGCA---ACAACCGGATCCATTGCCGCA
droBip1 scf7180000396589:955774-955945 + TA-CCAC---AGCTTCTACAACCCCGCAAACGACGACAACTGACTCCA-------------------------CAA--------CGGT-----------------------TTCCACA---ACTCCGAAGACTACAACAACTGAATCCACAACACCAAAACCAACGACCACTGAGTCAACAACAGCTTC---CACAACAACCGAGTCCACTACTATT---TCAACAACACCGAAAACAACG
droKik1 scf7180000302136:10065-10117 - CAACAAC---AACTGCTACAACAACAACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTACA---ACAACAACGTGCACTACCACA
droFic1 scf7180000453495:479779-479854 + AT-CCACTTCTAGAGCGTCGGGATCCACTTCTAGAGCGCCTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGCTCCTGGA---ACGCCTAGAACCACTTCTCGA
droEle1 scf7180000486474:1018427-1018556 + CA-CTAC---TACAACAACAGAACCCACTACTACAACAACAGAACCCACTACTACAA----------------------------------------------------------------CAA-------------CAGAACCC------------------------ACTACTACAACAACAGAACC---CACTACTACAACAACCACCACAACA---ACAACTGAACCCACTACGACA
droRho1 scf7180000779561:15118-15160 - CT-CCGG---CGCCGCAACAGGCTCCTCTGCCGCCGCAACAGGCTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302126:799674-799716 - AA-CGTC---TGGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCTACGCGA---TCGTCTTGATCCACTCCTAGA
droTak1 scf7180000415672:133422-133457 + TT-TG-C---CGCCCTTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGCGCCACCACCACG
droEug1 scf7180000409089:145222-145336 + CG-TAGC---CACCGCCATAGCCGCCACCGCCGCCACCGCTGGCACCAGAGTCGG------------------AGA--------TAAC-----------------------CTTGATG---ATC-------------TTGA------------------------------------------------------TGTTGCCACCGCTTCCATAGCC---ACCACCGCCTCCATAGCCACC
dm3 chr3L:16381437-16381575 + TA-GCTC---CGCCACAGCAGCTAGCTCCACCACAGCAGCTAGCTCCACCACAGCAGC--------------------------TAG-----------------------CTCCACCA---CAG-------------CAGCTAGC------------------------TCCACCACAGCAGCGAGCTCCGCCACAGCAGCGAGCTCCGCCACA---------GCAGCTGGCTCCGCCACA
droSim2 3l:3720145-3720280 + AA-CAGC---GGCCGCTGCGGCCGCCGTTGTTGTTGTTGCCAGTGCCAACGCCGCCGT--------------------------TG-----------------------------------CCT-------------CAAGCGCC------------------------AACTCATCGGGAGTGGGTTCAGGATCGGGACCGGGATCGGGAGCAGGA---GTAACAGGACCAGTAGCCGCA
droSec2 scaffold_2:3823599-3823638 + AG-TAAC---AGGACCAGTAGCCGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGCAGCCACTGCCGGA
droYak3 v2_chrUn_1501:439-484 - CG-CAGT---CGCAGCCACCGTTGCCACCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCA
droEre2 scaffold_4690:10882535-10882607 - CA-CTTC---TTGAGCGCCTAGATCCGCTCCTAGAGCGCCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGCTCCTTGA---GCGCCTGGATCCGCTCCTAGA
droWil2 scf2_1100000004513:3424672-3424855 + CA-TTAT---TGCCAAAGCCATCGACATCACCGCCACCGCCGCCTCCAACTCCATTGTTGGCCCACGGGTTGATGAATGGATTATCACCACGTTGTCCGCCGC-------CACCGCCT---AGA-------------TTGCTAGA------------------------TCCTCCATTACCAC---CGCCGCCGAAGCGATCCCGGCCACCACTACC---ACCGCGACCTCCACCACCGCC
droVir3 scaffold_13246:1774121-1774262 - CA-CAAC---TACAACAACAACCTGCACCACACCCACAACAACCACTTGCACAACAA------------------C--------AAC-----------------------AACCACTA---CGA-------------CAACAACC------------------------ACCACTACAACAAC---CACTACTACAACAACCACTACTACAACAACC---ACAACCTGCACCACACCCACA
droMoj3 scaffold_6496:2157793-2157937 + CT-CCTG---CACCACCGAAGCCTCCAGCTCCACCTGCGCCTCCACCGTAGCC---TC---------------CGG--------CAC--------------------------CAGCTCCACCT-------------CCAGCGCC------------------------GCCTCCGCGACCAG---CACCTCCGCCACCACCAGCACCACCACCGAAGCCACCAGCTCCAGCACCGCCTGC
droGri2 scaffold_15252:8366899-8367043 - CA-TGGC---CACCGCCTCCAAGGCCACCGCCTCCATGACCACCGCCAGCTGATCCCC---------------CAG--------CAAA-----------------------ACCACCG---GCT-------------CCATGGCC------------------------ACCTCCAGCTGATC---CTCCAGCAAAACCACCGGCTCCATGGCCGCC---GCCAGCTGATCCTCCAGCGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CA-TTGC---CGCCACAGCAGGCTCCATTGCCGCCACAGCAGGCTCCATTGCAGGTA------------------A--------GCC-------ATCCCACACACCAAACTAGAGGCT---CTT-------------ACTTACTC------------------------ACTTTTTCATCGGCAGATTC---CGCAACAGCAGGCTCCTTTGCCGCA---ACAACCGGATCCATTGCCGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................TC---CGCAACAGCAGGCTCCTTTGCCGC.........................2624.509090000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGATTC---CGC..............................................2824.509540000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACACACC.......................................................................................................................................2663.33201190000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGATTC---C................................................2632.006330000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACACA.........................................................................................................................................2461.83111100000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCAC............................................................................................................................................2161.8311182000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACA...........................................................................................................................................2261.83111010000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACACAC........................................................................................................................................2561.8311920000
..........CGCCACAGCAGGCTCCATTGCCGC...............................................................................................................................................................................................................24201.753510241000
...........................................CTCCATTGCAGGTA------------------A--------GCC-------ATCCC..............................................................................................................................................2361.6710550000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------ACT.....................................................................................................2661.67101000000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGATTC---CG...............................................2721.503300000
...........................................CTCCATTGCAGGTA------------------A--------GCC-------ATCC...............................................................................................................................................2261.509360000
..........CGCCACAGCAGGCTCCATTGCCG................................................................................................................................................................................................................23201.45292900000
..........CGCCACAGCAGGCTCCATTGCC.................................................................................................................................................................................................................22201.40283250000
...........................................................................................................................................TTACTC------------------------ACTTTTTCATCGGCAGAT......................................................2431.334210010
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGATT.....................................................2431.334310000
...........................................CTCCATTGCAGGTA------------------A--------GCC-------ATCCCA.............................................................................................................................................2461.338710000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACAC..........................................................................................................................................2361.338530000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---CT......................................................................................................................2661.338800000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---C.......................................................................................................................2561.177430000
...............................................................................................TCCCACACACCAAACTAGAGGCT---CT......................................................................................................................2561.006600000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------........................................................................................................2361.006510000
....................................................................................................................CT---CTT-------------ACTTACTC------------------------ACTTTTTCATCGG...........................................................2631.003300000
...........................................................................................................................................TTACTC------------------------ACTTTTTCATCGGCAGATTC---.................................................2631.003300000
.....................................................................................................................................................................................................................CGCA---ACAACCGGATCCATTGCCGC.2461.006510000
...........................................................................................................................................TTACTC------------------------ACTTTTTCATCGGCAGA.......................................................2331.003120000
...............................CGCCACAGCAGGCTCCATTGCAGG..........................................................................................................................................................................................2461.006600000
................................................................................................................................................................................................CGCAACAGCAGGCTCCTTTGCCGC.........................2421.002020000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---........................................................................................................................2461.006330000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGATTC---CGCA.............................................2921.002200000
......................CTCCATTGCCGCCACAGCAGGCTC...................................................................................................................................................................................................24200.85172141000
..................................................................................................................................................................................................................TGCCGCA---ACAACCGGATCCATTGC....2460.835410000
.................................................................................................CCACACACCAAACTAGAGGCT---CTT-------------ACT.....................................................................................................2760.674400000
..............................................................................................ATCCCACACACCAAACTAGAGG.............................................................................................................................2260.674220000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGATTC---.................................................2530.672200000
...........................................................................................................................T-------------ACTTACTC------------------------ACTTTTTCATCGGCAGA.......................................................2630.672110000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCC..............................................................................................................................................1960.674022000
..................................................................................................................................................................................................................TGCCGCA---ACAACCGGATCCATTG.....2360.674400000
...........................................................................................................................T-------------ACTTACTC------------------------ACTTTTTCATCGGCAGAT......................................................2730.672110000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACACACCA......................................................................................................................................2760.674400000
..................................................................................................................................................................................................................TGCCGCA---ACAACCGGATCCATTGCCGC.2760.674310000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGA.......................................................2230.672110000
...........................................CTCCATTGCAGGTA------------------A--------GCC-------ATC................................................................................................................................................2160.674211000
......C---CGCCACAGCAGGCTCCATTGC..................................................................................................................................................................................................................22200.55110110000
..........CGCCACAGCAGGCTCCATTGC..................................................................................................................................................................................................................21200.55111100000
..............................CCGCCACAGCAGGCTCCATTGC.............................................................................................................................................................................................22200.55110110000
...............................CGCCACAGCAGGCTCCATTGC.............................................................................................................................................................................................21200.55111100000
...........................................CTCCATTGCAGGTA------------------A--------GCC-------ATCCCACA...........................................................................................................................................2660.503300000
...........................................................................................................................................................................................TC---CGCAACAGCAGGCTCCTTTG.............................2220.501100000
...............................CGCCACAGCAGGCTCCATTGCAG...........................................................................................................................................................................................2360.503210000
................................................................................................................................................................................................CGCAACAGCAGGCTCCTTTGCC...........................2220.501010000
..................................................................................................................................................................................................................TGCCGCA---ACAACCGGATCCATTGCCG..2660.503201000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACACACCAA.....................................................................................................................................2860.503300000
...................................................................................................................................................................................................................GCCGCA---ACAACCGGATCCATTGCCGC.2660.503201000
...............................................................................................TCCCACACACCAAACTAGAGGCT---CTT-------------A.......................................................................................................2760.503300000
..................................................................................................................................................................................TCGGCAGATTC---CGCAACAGCAGGCTCCT................................2820.501100000
..........................................................................................................................................................................................TTC---CGCAACAGCAGGCTCC.................................1920.501100000
...................................................................................................................................................................................................AACAGCAGGCTCCTTTGCCGCA---ACAACC...............2820.501100000
...................................................................................................................................................................................................................GCCGCA---ACAACCGGATCCATTGC....2360.503300000
...................................................................................................................................................................................................AACAGCAGGCTCCTTTGCCGCA---AC...................2420.501010000
.............................................................................................................................................................................................................TCCTTTGCCGCA---ACAACCGGATCCATT......2720.501100000
........................................................................................................................................................................................GATTC---CGCAACAGCAGGCTCCTTTGC............................2620.501010000
..............................................................................................................................................................................TTCATCGGCAGATTC---CGCAACAGCAGGC....................................2820.501010000
........................................................................................................................................................................................GATTC---CGCAACAGCAGGC....................................1820.501100000
................................................TTGCAGGTA------------------A--------GCC-------ATCCCACACA.........................................................................................................................................2360.503300000
...................................................................................................................................................................................................AACAGCAGGCTCCTTTGCCGCA---ACAA.................2620.501100000
...........................................................................A--------GCC-------ATCCCACACACCAAACTAGAGGC............................................................................................................................2760.503120000
..............................................................................................................................................................................................................CCTTTGCCGCA---ACAACCGGATCCATTG.....2720.501100000
............................................TCCATTGCAGGTA------------------A--------GCC-------ATCCCACAC..........................................................................................................................................2660.503120000
.............................................................................................................................................................................................................TCCTTTGCCGCA---ACAACCG..............1920.501001000
................................................TTGCAGGTA------------------A--------GCC-------ATCCCACACACC.......................................................................................................................................2560.503120000
.................................................................................................................................................................................ATCGGCAGATTC---CGCAACAGC........................................2120.501100000
................................................................................................................................................................................................................TTTGCCGCA---ACAACCGGATCCATTG.....2520.501100000
.............................................................................................................................................ACTC------------------------ACTTTTTCATCGGCAGATTC---CGC..............................................2720.501100000
................................................................................................................................................................................................CGCAACAGCAGGCTCCTTTGC............................2120.501010000
................................................................................................................................................C------------------------ACTTTTTCATCGGCAGATTC---CGC..............................................2420.501010000
...........................................................................................................................................................................................TC---CGCAACAGCAGGCTCCTTTGCCGT.........................2620.501010000
...............................................................................................................................................................................TCATCGGCAGATTC---CGCAACAGC........................................2320.501100000
............................................................................................................................................................................................................CTCCTTTGCCGCA---ACAACCGGA............2220.501100000
..............................................................................................................................................................................TTCATCGGCAGATTC---CGCAACAGC........................................2420.501100000
..........CGCCACAGCAGGCTCCATTGCCGCC..............................................................................................................................................................................................................25200.408080000
......................CTCCATTGCCGCCACAGCAGGCTCC..................................................................................................................................................................................................25200.408080000
..........CGCCACAGCAGGCTCCATTGCCGCCA.............................................................................................................................................................................................................26200.357700000
.............CACAGCAGGCTCCATTGCCGCC..............................................................................................................................................................................................................22200.357340000
.........................................................................................................................CTT-------------ACTTACTC------------------------ACTTTTTCATCGGCA.........................................................2630.331100000
..............................................................................................ATCCCACACACCAAACTAGAGGC............................................................................................................................2360.332110000
................................GCCACAGCAGGCTCCATTGCAGG..........................................................................................................................................................................................2360.332200000
..........................................................................................................................TT-------------ACTTACTC------------------------ACTTTTTCATCGGCAGA.......................................................2730.331100000
...................................................................................................................GCT---CTT-------------ACTTACTC------------------------ACTTTTTCATCGG...........................................................2730.331100000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---CTT-------------A.......................................................................................................2860.332200000
..................................CACAGCAGGCTCCATTGCAGGTA------------------A--------GC...........................................................................................................................................................2660.332110000
...................................................................................................ACACACCAAACTAGAGGCT---CTT-------------AC......................................................................................................2460.332200000
............................................................................................................................................TACTC------------------------ACTTTTTCATCGGCAGAT......................................................2330.331100000
..............................................CATTGCAGGTA------------------A--------GCC-------ATCCC..............................................................................................................................................2060.332020000
...........................................................................................................................T-------------ACTTACTC------------------------ACTTTTTCATCGGC..........................................................2330.331010000
...................................................................................................................................................................................................................GCCGCA---ACAACCGGATCCATTGCCG..2560.332200000
...........................................................................................................................................TTACTC------------------------ACTTTTTCATCGGCAGATTC---C................................................2730.331100000
..........................................................................................................................TT-------------ACTTACTC------------------------ACTTTTTCATCGG...........................................................2330.331010000
..................................................................................................CACACACCAAACTAGAGGCT---C.......................................................................................................................2160.332200000
..........................................................................................................................TT-------------ACTTACTC------------------------ACTTTTTCATCGGC..........................................................2430.331100000
.................................................................................................CCACACACCAAACTAGAGGCT---CTT-------------A.......................................................................................................2560.332110000
.......................................................................................................................................................................................................................CA---ACAACCGGATCCATTGCCG..2160.332200000
...................................................................................................ACACACCAAACTAGAGGCT---CTT-------------ACTA....................................................................................................2660.332200000
..................................................................................................CACACACCAAACTAGAGGCT---CT......................................................................................................................2260.332200000
...................................................................................................................................................................................................................GCCGCA---ACAACCGGATCCATTGCCGCA2760.332200000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCC...............................................................................................................................................1860.332020000
...............................CGCCACAGCAGGCTCCATTGCAGGTA------------------......................................................................................................................................................................2660.332200000
......................................................................................................CACCAAACTAGAGGCT---CTT-------------ACTTAC..................................................................................................2560.332200000
..........................................................................................................................TT-------------ACTTACTC------------------------ACTTTTTCATCGGCA.........................................................2530.331100000
......................................................................................................................................................................................................................GCA---ACAACCGGATCCATTGCCGC.2360.332110000
.......................................................TA------------------A--------GCC-------ATCCCACACACCAAACTAGAGG.............................................................................................................................2860.332020000
.......................................................................................................................................................................................................................CA---ACAACCGGATCCATTGCCGC.2260.332110000
.............................................................................................................................................ACTC------------------------ACTTTTTCATCGGCAGATTC---C................................................2530.331010000
..................................CACAGCAGGCTCCATTGCAGGTA------------------A--------G............................................................................................................................................................2560.332200000
...........................................................................................................................................TTACTC------------------------ACTTTTTCATCGGCAGATT.....................................................2530.331100000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------AC......................................................................................................2560.332200000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------ACTTA...................................................................................................2860.332200000
............CCACAGCAGGCTCCATTGCCGC...............................................................................................................................................................................................................22200.306150000
.....................GCTCCATTGCCGCCACAGCAGGCTC...................................................................................................................................................................................................25200.306060000
......................CTCCATTGCCGCCACAGCAGGCT....................................................................................................................................................................................................23200.255320000
..........................ATTGCCGCCACAGCAGGCTCC..................................................................................................................................................................................................21200.204130000
.....................GCTCCATTGCCGCCACAGCAGGCTCCA.................................................................................................................................................................................................27200.204400000
.A-TTGC---CGCCACAGCAGGCTCC.......................................................................................................................................................................................................................21200.204130000
..........................ATTGCCGCCACAGCAGGCTCCATTGCAGA..........................................................................................................................................................................................2950.201010000
...................................................................................................ACACACCAAACTAGAGGCT---CTT-------------A.......................................................................................................2360.171100000
................................GCCACAGCAGGCTCCATTGCAGGTA------------------A--------G............................................................................................................................................................2760.171010000
...............................................................................................TCCCACACACCAAACTAGAGGC............................................................................................................................2260.171100000
.................................................................................................CCACACACCAAACTAGAGG.............................................................................................................................1960.171100000
.................................................TGCAGGTA------------------A--------GCC-------ATCCCACACACCAA.....................................................................................................................................2660.171010000
...................................................................................................ACACACCAAACTAGAGGCT---CTT-------------........................................................................................................2260.171100000
...............................CGCCACAGCAGGCTCCATTGCAGT..........................................................................................................................................................................................2460.171100000
..................................CACAGCAGGCTCCATTGCAGGT.........................................................................................................................................................................................2260.171010000
......................................................................................................................................................................................................................GCA---ACAACCGGATCCATTGCC...2160.171010000
.......................................................................................................ACCAAACTAGAGGCT---CTT-------------ACTTAC..................................................................................................2460.171010000
...............................................................................................TCCCACACACCAAACTAGAGGCT---CTT-------------........................................................................................................2660.171100000
...............................CGCCACAGCAGGCTCCATTGCAGGT.........................................................................................................................................................................................2560.171100000
.................................................................................................CCACACACCAAACTAGAGGCT---CT......................................................................................................................2360.171100000
..............................................................................................ATCCCACACACCAAACTAGAG..............................................................................................................................2160.171100000
.............................................CCATTGCAGGTA------------------A--------GCC-------ATCCCA.............................................................................................................................................2260.171100000
................................GCCACAGCAGGCTCCATTGCAGGTA------------------A--------.............................................................................................................................................................2660.171100000
....................................CAGCAGGCTCCATTGCAGGTA------------------A--------GC...........................................................................................................................................................2460.171100000
.................................................................................................................................................................................................................TTGCCGCA---ACAACCGGATCCATTGC....2560.171100000
..................................CACAGCAGGCTCCATTGCAGGTA------------------......................................................................................................................................................................2360.171100000
.................................CCACAGCAGGCTCCATTGCAGGTA------------------......................................................................................................................................................................2460.171100000
......................................................................................C-------ATCCCACACACCAAACTAGAGGCT---........................................................................................................................2560.171010000
................................................................................................CCCACACACCAAACTAGAGGCT---CT......................................................................................................................2460.171100000
.......................................................................................................................................................................................................................CA---ACAACCGGATCCATTGCCGCA2360.171100000
.................................................................................................CCACACACCAAACTAGAGGCT---CTT-------------ACTT....................................................................................................2860.171100000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------ACA.....................................................................................................2660.171100000
..................................................................................................................................................................................................................TGCCGCA---ACAACCGGATCCATTGCC...2560.171010000
...............................................................................................TCCCACACACCAAACTAGAGGCT---CTT-------------AC......................................................................................................2860.171100000
.............................................CCATTGCAGGTA------------------A--------GCC-------ATCCCACACAC........................................................................................................................................2760.171100000
........................................................................................................................................................................................................................A---ACAACCGGATCCATTGC....1860.171100000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---CTT-------------........................................................................................................2760.171100000
..............................................CATTGCAGGTA------------------A--------GCC-------ATCCCACACA.........................................................................................................................................2560.171100000
..................................CACAGCAGGCTCCATTGCAGG..........................................................................................................................................................................................2160.171100000
..................................................GCAGGTA------------------A--------GCC-------ATCCCACACACCAA.....................................................................................................................................2560.171100000
...............................................................................................TCCCACACACCAAACTAGAGGCT---C.......................................................................................................................2460.171100000
......................................................................................................CACCAAACTAGAGGCT---CTT-------------ACTT....................................................................................................2360.171100000
...................................................CAGGTA------------------A--------GCC-------ATCCCACACACCAAACT..................................................................................................................................2760.171100000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCACACACA.......................................................................................................................................2660.171100000
......................................................................................................CACCAAACTAGAGGCT---CTT-------------ACT.....................................................................................................2260.171100000
.................................................................................................CCACACACCAAACTAGAGGC............................................................................................................................2060.171000010
...................................................................................................................................................................................................................GCCGCA---ACAACCGGATCCATTGCC...2460.171100000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---CTA-------------........................................................................................................2760.171100000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------A.......................................................................................................2460.171010000
...............................CGCCACAGCAGGCTCCATTGCAGGTT------------------......................................................................................................................................................................2660.171100000
.................................................................................................CCACACACCAAACTAGAGGCT---CTT-------------........................................................................................................2460.171100000
...................................................CAGGTA------------------A--------GCC-------ATCCCACACACC.......................................................................................................................................2260.171010000
..................................CACAGCAGGCTCCATTGCAGGTA------------------A--------GCC-------...................................................................................................................................................2760.171010000
...............................................................................................TCCCACACACCAAACTAGAGGCT---CTT-------------ACT.....................................................................................................2960.171100000
.................................................................................................CCACACACCAAACTAGAGGCT---CTT-------------AG......................................................................................................2660.171100000
...............................................ATTGCAGGTA------------------A--------GCC-------ATCCCA.............................................................................................................................................2060.171000010
.................................................................................................................................................................................................................TTGCCGCA---ACAACCGGATCCATTGCCGC.2860.171100000
...................................................................................................................................................................................................................GCCGCA---ACAACCGGATCCAT.......2060.171100000
..............................................CATTGCAGGTA------------------A--------GCC-------ATCCCACACACC.......................................................................................................................................2760.171010000
........................................................................................................................................................................................................................A---ACAACCGGATCCATTGCCGC.2160.171100000
..................................................................................................................................................................................................................TGCCGCA---ACAACCGGATCCATT......2260.171100000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---T.......................................................................................................................2560.171100000
...............................CGCCACAGCAGGCTCCATTGCAGGAT------------------T--------.............................................................................................................................................................2760.171100000
................................GCCACAGCAGGCTCCATTGCAT...........................................................................................................................................................................................2260.171100000
..................................CACAGCAGGCTCCATTGCAGGTA------------------A--------GCC-------A..................................................................................................................................................2860.171100000
..................................................................................................CACACACCAAACTAGAGGCT---CTT-------------ACTTAC..................................................................................................2960.171010000
..............................................................................................ATCCCACACACCAAACTAGAGGCT---CTT-------------AC......................................................................................................2960.171100000
....................................................................................................CACACCAAACTAGAGGCT---CTT-------------AA......................................................................................................2360.171001000
....................................................................................GCC-------ATCCCACACACCAAACTAGAGGC............................................................................................................................2660.171010000
................................................................................................CCCACACACCAAACTAGAGGCT---CTT-------------........................................................................................................2560.171100000
...........................................CTCCATTGCAGGTA------------------A--------GCC-------ATCCCACAC..........................................................................................................................................2760.171100000
..................................................GCAGGTA------------------A--------GCC-------ATCCCACACACC.......................................................................................................................................2360.171010000
.................................................TGCAGGTA------------------A--------GCC-------ATCCCAC............................................................................................................................................1960.171010000
.................................................TGCAGGTA------------------A--------GCC-------ATCCCACACACC.......................................................................................................................................2460.171100000
................................................................................................CCCACACACCAAACTAGAGGCT---CTT-------------ACT.....................................................................................................2860.171100000
.................................CCACAGCAGGCTCCATTGC.............................................................................................................................................................................................19200.153120000
.............CACAGCAGGCTCCATTGCCGC...............................................................................................................................................................................................................21200.153030000
..................CAGGCTCCATTGCCGCCACAGCAGG......................................................................................................................................................................................................25200.153210000
CA-TTGC---CGCCACAGCAGGCTCC.......................................................................................................................................................................................................................22200.153300000
....TGC---CGCCACAGCAGGCTCCATTGC..................................................................................................................................................................................................................24200.153210000
.........................CATTGCCGCCACAGCAGGCTCC..................................................................................................................................................................................................22200.153300000
............CCACAGCAGGCTCCATTGC..................................................................................................................................................................................................................19200.153120000
............CCACAGCAGGCTCCATTGCCGCC..............................................................................................................................................................................................................23200.153210000
......................CTCCATTGCCGCCACAGCA........................................................................................................................................................................................................19200.153210000
........................................................................................................CCAAACTAGAGGCT---CTT-------------ACT.....................................................................................................2070.141100000
.........................................................................................................CAAACTAGAGGCT---CTT-------------ACTTACTC------------------------A.......................................................................2570.141100000
.........................................................................................................CAAACTAGAGGCT---CTT-------------ACT.....................................................................................................1970.141100000
................................................................................................................GAGGCT---CTT-------------ACTTACTC------------------------ACT.....................................................................2080.131010000
..................CAGGCTCCATTGCCGCCACAGCA........................................................................................................................................................................................................23200.102020000
..........CGCCACAGCAGGCTCCATTGCCGCCT.............................................................................................................................................................................................................26200.102110000
....TGC---CGCCACAGCAGGCTCCATTG...................................................................................................................................................................................................................23200.102200000
............................TGCCGCCACAGCAGGCTCCATTG..............................................................................................................................................................................................23200.102200000
......................CTCCATTGCCGCCACAGCAGGC.....................................................................................................................................................................................................22200.102020000
.....................GCTCCATTGCCGCCACAGCAGG......................................................................................................................................................................................................22200.102100001
.......................TCCATTGCCGCCACAGCAGGCTCC..................................................................................................................................................................................................24200.102020000
..........CGCCACAGCAGGCTCCATTGCCGCCAA............................................................................................................................................................................................................27200.102200000
...........GCCACAGCAGGCTCCATTGCCGCCAC............................................................................................................................................................................................................26200.102020000
............................TGCCGCCACAGCAGGCTCCATTGC.............................................................................................................................................................................................24200.102200000
......................CTCCATTGCCGCCACAGCAGG......................................................................................................................................................................................................21200.102020000
..........CGCCACAGCAGGCTCCATTGCCGT...............................................................................................................................................................................................................24200.102200000
.......................TCCATTGCCGCCACAGCAGGCTCCATT...............................................................................................................................................................................................27200.102200000
........................CCATTGCCGCCACAGCAGGCTCCATT...............................................................................................................................................................................................26200.102200000
.....................GCTCCATTGCCGCCACAGCAGGCTCC..................................................................................................................................................................................................26200.102200000
...TTGC---CGCCACAGCAGGCTCCATTGCCGCC..............................................................................................................................................................................................................29180.061100000
....TGC---CGCCACAGCAGGCTCCATTGCC.................................................................................................................................................................................................................25180.061010000
droBip1
TA-CCAC---AGCTTCTACAACCCCGCAAACGACGACAACTGACTCCA-------------------------CAA--------CGGT-----------------------TTCCACA---ACTCCGAAGACTACAACAACTGAATCCACAACACCAAAACCAACGACCACTGAGTCAACAACAGCTTC---CACAACAACCGAGTCCACTACTATT---TCAACAACACCGAAAACAACGSizeHit CountTotal NormTotal
No Reads
droKik1
CAACAAC---AACTGCTACAACAACAACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTACA---ACAACAACGTGCACTACCACASizeHit CountTotal NormTotal
No Reads
droFic1
AT-CCACTTCTAGAGCGTCGGGATCCACTTCTAGAGCGCCTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGCTCCTGGA---ACGCCTAGAACCACTTCTCGASizeHit CountTotal NormTotal
No Reads
droEle1
CA-CTAC---TACAACAACAGAACCCACTACTACAACAACAGAACCCACTACTACAA----------------------------------------------------------------CAA-------------CAGAACCC------------------------ACTACTACAACAACAGAACC---CACTACTACAACAACCACCACAACA---ACAACTGAACCCACTACGACASizeHit CountTotal NormTotal
No Reads
droRho1
CT-CCGG---CGCCGCAACAGGCTCCTCTGCCGCCGCAACAGGCTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AA-CGTC---TGGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCTACGCGA---TCGTCTTGATCCACTCCTAGASizeHit CountTotal NormTotal
No Reads
droTak1
TT-TG-C---CGCCCTTGAAGCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGGCGCCACCACCACGSizeHit CountTotal NormTotal
No Reads
droEug1
CG-TAGC---CACCGCCATAGCCGCCACCGCCGCCACCGCTGGCACCAGAGTCGG------------------AGA--------TAAC-----------------------CTTGATG---ATC-------------TTGA------------------------------------------------------TGTTGCCACCGCTTCCATAGCC---ACCACCGCCTCCATAGCCACCSizeHit CountTotal NormTotal
No Reads
dm3
TA-GCTC---CGCCACAGCAGCTAGCTCCACCACAGCAGCTAGCTCCACCACAGCAGC--------------------------TAG-----------------------CTCCACCA---CAG-------------CAGCTAGC------------------------TCCACCACAGCAGCGAGCTCCGCCACAGCAGCGAGCTCCGCCACA---------GCAGCTGGCTCCGCCACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................GCGAGCTCCGCCACAGCAGCG.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CAG-------------CAGCTAGC------------------------TCCACCACAGCAGCGA........................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CACAGCAGCTAGCTCCACCACAGCA...........................................................................................................................................................................................................2541.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CA---CAG-------------CAGCTAGC------------------------TCCACCACAGCA............................................................2541.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TCCGCCACAGCAGCGAGCTCCGCCACA---------..................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CACAGCAGC--------------------------TAG-----------------------CTCCACCA---CAG-------------CA......................................................................................................2541.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CACAGCAGCTAGCTCCACCACAGCA.........................................................................................................................................................................................2541.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CGAGCTCCGCCACA---------GCAGCTGG..........2211.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CACCACAGCAGCGAGCTCCGCCACAGCAGC........................................3030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CACCACAGCAGCGAGCTCCGCCA...............................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....CTC---CGCCACAGCAGCTAGCTCCA...................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TAGC------------------------TCCACCACAGCAGCGAGCTCCG..................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GCAGCGAGCTCCGCCACA---------GCAGCT............2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................CCACCACAGCAGC--------------------------TAG-----------------------CTC................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................CCACCACAGCAGCTAGCTC...................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................ACAGCAGCGAGCTCCGCC..............................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAGCAGCGAGCTCCGCCACA---------GCAGC.............2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GCGAGCTCCGCCACA---------GCAG..............1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAGCAGCGAGCTCCGCCACAG............................................2140.2510000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAGCAGCGAGCTCCGCCACA---------G.................2140.2510000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAGCAGCGAGCTCCGCCACAGCAGC........................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CACCACAGCAGCGAGCTCC...................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCGAGCTCCGCCACAGCAG.........................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGCGAGCTCCGCCACAGCAGC........................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCTC---CGCCACAGCAGCTAGCTC.....................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CCACCA---CAG-------------CAGCTAGC------------------------TC......................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................ACAGCAGCGAGCTCCGCC................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AGCGAGCTCCGCCACA---------GCAGC.............2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AA-CAGC---GGCCGCTGCGGCCGCCGTTGTTGTTGTTGCCAGTGCCAACGCCGCCGT--------------------------TG-----------------------------------CCT-------------CAAGCGCC------------------------AACTCATCGGGAGTGGGTTCAGGATCGGGACCGGGATCGGGAGCAGGA---GTAACAGGACCAGTAGCCGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................GAGTGGGTTCAGGATCGGGAC.........................................2112.00220000000000000000
......................................GCCAGTGCCAACGCCGCCG........................................................................................................................................................................................1911.00100001000000000000
.................................TTGTTGCCAGTGCCAACGCCGCCG........................................................................................................................................................................................2411.00100000000001000000
.......................................................CGT--------------------------TG-----------------------------------CCT-------------CAAGCGCC------------------------AA......................................................................1811.00100001000000000000
......................................................................................................................................................................................................ACCGGGATCGGGAGCAGGA---GTAACAA..............2611.00100000000000010000
.........................................................T--------------------------TG-----------------------------------CCT-------------CAAGCGCC------------------------AACTCATCGGGA............................................................2611.00100000000001000000
....................................................................................TG-----------------------------------CCT-------------CAAGCGCC------------------------AACTCATCGGGAGT..........................................................2711.00100010000000000000
....................................................................................................................................................................................AGTGGGTTCAGGATCGGGACC........................................2111.00100000000000100000
..............GCTGCGGCCGCCGTT....................................................................................................................................................................................................................1530.33100000000001000000
droSec2
AG-TAAC---AGGACCAGTAGCCGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGCAGCCACTGCCGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CG-CAGT---CGCAGCCACCGTTGCCACCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................CCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGC.2252.2011011000000000
...........................CCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCA2351.40707000000000
..........CGCAGCCACCGTTGCCACCGTCACC..............................................................................................................................................................................................................2570.86600510000000
..........CGCAGCCACCGTTGCCACCGTCAC...............................................................................................................................................................................................................2470.43300300000000
................CACCGTTGCCACCGTCACCACCGCC........................................................................................................................................................................................................2570.43300300000000
...........................CCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTC...2050.40202000000000
.............................GTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGC.2050.40201100000000
......T---CGCAGCCACCGTTGCCACCGTCACC..............................................................................................................................................................................................................2670.29200200000000
......T---CGCAGCCACCGTTGCCACCGTCA................................................................................................................................................................................................................2470.29201010000000
............................CGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGC.2150.20101000000000
......................TGCCACCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT....2450.20101000000000
.......................GCCACCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGCA2750.20101000000000
...........................CCGTCACCACCGCCGAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCG..2150.20100000100000
..........CGCAGCCACCGTTGCCACCGTCACCA.............................................................................................................................................................................................................2670.14100100000000
.................ACCGTTGCCACCGTCACCACC...........................................................................................................................................................................................................2170.14101000000000
..............GCCACCGTTGCCACCGTCACCACCGC.........................................................................................................................................................................................................2670.14100100000000
.................ACCGTTGCCACCGTCACCACCG..........................................................................................................................................................................................................2270.14100100000000
............CAGCCACCGTTGCCACCGTCACC..............................................................................................................................................................................................................2370.14100100000000
.............AGCCACCGTTGCCACCGTCACCAC............................................................................................................................................................................................................2470.14100100000000
.....GT---CGCAGCCACCGTTGCCACCGTCACCAC............................................................................................................................................................................................................2970.14100100000000
..................CCGTTGCCACCGTCACCACCGT.........................................................................................................................................................................................................2270.14101000000000
..............GCCACCGTTGCCACCGTCACCACC...........................................................................................................................................................................................................2470.14100100000000
...CAGT---CGCAGCCACCGTTGCCACCGTCACC..............................................................................................................................................................................................................2970.14100100000000
..........CGCAGCCACCGTTGCCACCGTCACT..............................................................................................................................................................................................................2580.13100100000000
.G-CAGT---CGCAGCCACCGTTGCCACCGTC.................................................................................................................................................................................................................2780.13101000000000
............CAGCCACCGTTGCCACCGTC.................................................................................................................................................................................................................2080.13100100000000
......T---CGCAGCCACCGTTGCCACCGT..................................................................................................................................................................................................................2280.13100000010000
...CAGT---CGCAGCCACCGTTGCCACCGTC.................................................................................................................................................................................................................2680.13100100000000
droEre2
CA-CTTC---TTGAGCGCCTAGATCCGCTCCTAGAGCGCCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGCTCCTTGA---GCGCCTGGATCCGCTCCTAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droWil2
CA-TTAT---TGCCAAAGCCATCGACATCACCGCCACCGCCGCCTCCAACTCCATTGTTGGCCCACGGGTTGATGAATGGATTATCACCACGTTGTCCGCCGC-------CACCGCCT---AGA-------------TTGCTAGA------------------------TCCTCCATTACCAC---CGCCGCCGAAGCGATCCCGGCCACCACTACC---ACCGCGACCTCCACCACCGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CA-CAAC---TACAACAACAACCTGCACCACACCCACAACAACCACTTGCACAACAA------------------C--------AAC-----------------------AACCACTA---CGA-------------CAACAACC------------------------ACCACTACAACAAC---CACTACTACAACAACCACTACTACAACAACC---ACAACCTGCACCACACCCACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CT-CCTG---CACCACCGAAGCCTCCAGCTCCACCTGCGCCTCCACCGTAGCC---TC---------------CGG--------CAC--------------------------CAGCTCCACCT-------------CCAGCGCC------------------------GCCTCCGCGACCAG---CACCTCCGCCACCACCAGCACCACCACCGAAGCCACCAGCTCCAGCACCGCCTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CA-TGGC---CACCGCCTCCAAGGCCACCGCCTCCATGACCACCGCCAGCTGATCCCC---------------CAG--------CAAA-----------------------ACCACCG---GCT-------------CCATGGCC------------------------ACCTCCAGCTGATC---CTCCAGCAAAACCACCGGCTCCATGGCCGCC---GCCAGCTGATCCTCCAGCGTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:34 PM