ID:

dan_9

 Coordinate:

scaffold_12929:1586961-1587024 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.8 -36.8 -36.6

Flybase annnotation

utr3 [utr3_minus_9718]

No Repeatable elements found

Sense Strand Reads

ATTTAAATTATAGTTTTAAGAACTGTGTTTCATAAAGTCCTCACTGAAGCCGGGTTTCGTTAACAGCGGGCTGTCATTTCGAAATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAATAACAACGTTTAATAAATAAATAAATCACATTTAAATT

***********************************..(((.(((...((((((((((((((.((((((((((..................)))))))))).)))))))))))...)))))).)))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V106

head

 M044

female body

 V055

head

 M058

embryo

 V039

embryo

 V105

male body
............................................................................................TTCGTTGTCGACGAAACCTGC................................................... 21 0 1 20626.00 20626 18608 831 945 139 53 50
............................................................................................TTCGTTGTCGACGAAACCTGCA.................................................. 22 0 1 2509.00 2509 659 1205 361 271 9 4
............................................................................................TTCGTTGTCGACGAAACCTG.................................................... 20 0 1 964.00 964 331 451 178 2 0 2
..................................................CGGGTTTCGTTAACAGCGGGCT............................................................................................ 22 0 1 670.00 670 603 1 29 23 12 2
............................................................................................TTCGTTGTCGACGAAACCTGT................................................... 21 1 1 318.00 318 193 5 114 0 0 6
............................................................................................TTCGTTGTCGACGAAACCTTC................................................... 21 1 1 240.00 240 234 1 3 0 2 0
............................................................................................TTCGTTGTCGACGAAACCTGA................................................... 21 1 1 224.00 224 217 0 7 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAA................................................. 23 1 1 162.00 162 72 30 20 39 1 0
.............................................................................................TCGTTGTCGACGAAACCTGCA.................................................. 21 0 1 131.00 131 0 131 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCT..................................................... 19 0 1 130.00 130 24 29 75 2 0 0
.............................................................................................TCGTTGTCGACGAAACCTGC................................................... 20 0 1 108.00 108 13 95 0 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTGC................................................... 21 1 1 68.00 68 64 0 3 0 0 1
............................................................................................TTCGTTGTCGACGAAACCTGCAT................................................. 23 0 1 64.00 64 26 11 21 2 0 4
............................................................................................TTCGTTGTCTACGAAACCTGC................................................... 21 1 1 64.00 64 62 0 1 0 1 0
............................................................................................TTCGTTGTAGACGAAACCTGC................................................... 21 1 1 62.00 62 32 27 3 0 0 0
..................................................CGGGTTTCGTTAACAGCGGGC............................................................................................. 21 0 1 60.00 60 52 1 4 3 0 0
............................................................................................TTAGTTGTCGACGAAACCTGC................................................... 21 1 1 58.00 58 52 0 2 4 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCA.................................................. 22 1 1 49.00 49 0 0 0 49 0 0
............................................................................................TTCGTTGTCGACGAAACATGC................................................... 21 1 1 49.00 49 49 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTCC................................................... 21 1 1 42.00 42 22 0 15 0 5 0
............................................................................................TTCGTTGTCGACAAAACCTGC................................................... 21 1 1 40.00 40 33 4 2 0 0 1
............................................................................................TTGGTTGTCGACGAAACCTGC................................................... 21 1 1 37.00 37 35 0 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCT.................................................. 22 1 1 37.00 37 20 7 8 1 1 0
............................................................................................TTCGTTGTTGACGAAACCTGC................................................... 21 1 1 34.00 34 26 5 3 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTGC................................................... 21 1 1 34.00 34 3 30 1 0 0 0
............................................................................................TTCGTTGTCGATGAAACCTGC................................................... 21 1 1 32.00 32 29 0 2 0 1 0
.............................................................................................TCGTTGTCGACGAAACCTG.................................................... 19 0 1 31.00 31 0 31 0 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTGC................................................... 21 1 1 30.00 30 26 1 0 3 0 0
............................................................................................TTCGTTGTCGACGAGACCTGC................................................... 21 1 1 29.00 29 28 0 1 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTGC................................................... 21 1 1 29.00 29 22 1 5 0 1 0
............................................................................................CTCGTTGTCGACGAAACCTGC................................................... 21 1 1 29.00 29 26 0 3 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCGC................................................... 21 1 1 28.00 28 21 0 6 0 1 0
............................................................................................TTCGTTGTGGACGAAACCTGCA.................................................. 22 1 1 27.00 27 0 26 1 0 0 0
............................................................................................TTCGTTGTCGAAGAAACCTGC................................................... 21 1 1 26.00 26 24 0 1 1 0 0
............................................................................................TGCGTTGTCGACGAAACCTGC................................................... 21 1 1 26.00 26 1 0 2 23 0 0
............................................................................................TTCGTTGTAGACGAAACCTGCA.................................................. 22 1 1 24.00 24 1 22 0 1 0 0
............................................................................................TTCGTTGTCAACGAAACCTGC................................................... 21 1 1 24.00 24 20 0 4 0 0 0
............................................................................................TTTGTTGTCGACGAAACCTGC................................................... 21 1 1 23.00 23 23 0 0 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTGCA.................................................. 22 1 1 22.00 22 4 0 1 17 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCC.................................................. 22 1 1 21.00 21 8 5 7 1 0 0
............................................................................................TTCGTTGTCGACGAAACCTAC................................................... 21 1 1 20.00 20 19 0 1 0 0 0
............................................................................................TTCATTGTCGACGAAACCTGC................................................... 21 1 1 19.00 19 18 0 1 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTGC................................................... 21 1 1 19.00 19 15 1 3 0 0 0
............................................................................................TTCGTTGTCGACGAAAACTGC................................................... 21 1 1 19.00 19 16 0 2 0 1 0
............................................................................................TCCGTTGTCGACGAAACCTGC................................................... 21 1 1 19.00 19 18 0 0 0 0 1
............................................................................................TTCGTTGTCGACGGAACCTGC................................................... 21 1 1 18.00 18 17 0 1 0 0 0
............................................................................................TTCGTTGTCGACCAAACCTGC................................................... 21 1 1 18.00 18 14 0 4 0 0 0
............................................................................................TTCGTTGTCGGCGAAACCTGC................................................... 21 1 1 17.00 17 16 0 1 0 0 0
..................................................CTGGTTTCGTTAACAGCGGGCT............................................................................................ 22 1 1 17.00 17 5 0 0 12 0 0
............................................................................................TTCGTTGTCGACGAAATCTGC................................................... 21 1 1 17.00 17 17 0 0 0 0 0
...............................................................................................GTTGTCGACGAAACCTGC................................................... 18 0 1 17.00 17 16 1 0 0 0 0
..................................................CGTGTTTCGTTAACAGCGGGCT............................................................................................ 22 1 1 16.00 16 16 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAGCCTGC................................................... 21 1 1 16.00 16 13 0 3 0 0 0
............................................................................................TTCGTTTTCGACGAAACCTGC................................................... 21 1 1 16.00 16 12 0 3 0 1 0
............................................................................................ATCGTTGTCGACGAAACCTGC................................................... 21 1 1 16.00 16 15 0 1 0 0 0
...................................................GGGTTTCGTTAACAGCGGGCT............................................................................................ 21 0 1 15.00 15 13 0 0 0 2 0
............................................................................................TTCGTTGTCGACGAAACCTT.................................................... 20 1 1 14.00 14 7 3 4 0 0 0
............................................................................................TTCGTTATCGACGAAACCTGC................................................... 21 1 1 14.00 14 11 0 3 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGG................................................... 21 1 1 14.00 14 12 1 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACTTGC................................................... 21 1 1 13.00 13 12 0 1 0 0 0
............................................................................................TTCGTTGTCCACGAAACCTGC................................................... 21 1 1 13.00 13 10 0 3 0 0 0
............................................................................................TTCGTCGTCGACGAAACCTGC................................................... 21 1 1 12.00 12 12 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCGGC................................................... 21 1 1 11.00 11 5 0 6 0 0 0
..............................................................................................CGTTGTCGACGAAACCTGCA.................................................. 20 0 1 11.00 11 0 11 0 0 0 0
..................................................CGGGTTTCGTTAACATCGGGCT............................................................................................ 22 1 1 11.00 11 9 0 2 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTG.................................................... 20 1 1 11.00 11 0 11 0 0 0 0
............................................................................................TTCGTTGTCGACGCAACCTGC................................................... 21 1 1 11.00 11 9 0 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCG.................................................. 22 1 1 10.00 10 1 5 4 0 0 0
............................................................................................TTCGTTGTCGACGAAACC...................................................... 18 0 1 10.00 10 1 0 0 9 0 0
..................................................CGGGTTTCGTTAACAGCGGGAT............................................................................................ 22 1 1 9.00 9 9 0 0 0 0 0
............................................................................................TTCGTTCTCGACGAAACCTGC................................................... 21 1 1 9.00 9 8 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTC.................................................... 20 1 1 9.00 9 9 0 0 0 0 0
..................................................CGGGTTTCGTTAACAGCGGGCC............................................................................................ 22 1 1 9.00 9 1 0 0 8 0 0
............................................................................................TTCGTTGTAGACGAAACCTG.................................................... 20 1 1 9.00 9 2 7 0 0 0 0
..............................................................................................CGTTGTCGACGAAACCTGC................................................... 19 0 1 9.00 9 3 6 0 0 0 0
............................................................................................TTCGGTGTCGACGAAACCTGC................................................... 21 1 1 9.00 9 0 0 9 0 0 0
............................................................................................TTCGTTGTCGACGACACCTGC................................................... 21 1 1 9.00 9 5 1 3 0 0 0
..................................................CGGGTTTCGTTAACAGCGGG.............................................................................................. 20 0 1 8.00 8 8 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGC................................................... 21 1 1 8.00 8 6 0 2 0 0 0
............................................................................................TTCCTTGTCGACGAAACCTGC................................................... 21 1 1 8.00 8 8 0 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCTGC................................................... 21 1 1 8.00 8 1 0 7 0 0 0
............................................................................................GTCGTTGTCGACGAAACCTGCA.................................................. 22 1 1 7.00 7 1 6 0 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTGC................................................... 21 1 1 7.00 7 5 0 2 0 0 0
............................................................................................TTCGTTGTCGCCGAAACCTGC................................................... 21 1 1 7.00 7 4 0 3 0 0 0
..................................................CGGGTTTCGTTAACAGAGGGCT............................................................................................ 22 1 1 7.00 7 7 0 0 0 0 0
............................................................................................TTCGTTGTTGACGAAACCTGCA.................................................. 22 1 1 7.00 7 0 7 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGAA.................................................. 22 1 1 7.00 7 7 0 0 0 0 0
.............................................................................................TTGTTGTCGACGAAACCTGC................................................... 20 1 1 7.00 7 6 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGTA.................................................. 22 1 1 6.00 6 4 1 1 0 0 0
............................................................................................TTCGTTGTCGACGTAACCTGC................................................... 21 1 1 6.00 6 6 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAG................................................. 23 1 1 6.00 6 3 1 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTTCA.................................................. 22 1 1 6.00 6 6 0 0 0 0 0
............................................................................................TTCGTTGACGACGAAACCTGC................................................... 21 1 1 6.00 6 4 1 1 0 0 0
........................................................................................................GAAACCTGCATGCTGCGT.......................................... 18 1 1 5.00 5 4 1 0 0 0 0
..................................................CTGGTTTCGTTAACAGCGGGCC............................................................................................ 22 2 1 5.00 5 0 0 0 5 0 0
............................................................................................GTCGTTGTCGACGAAACCTGC................................................... 21 1 1 5.00 5 0 2 3 0 0 0
............................................................................................TTCGTTGTCGCCGAAACCTGCA.................................................. 22 1 1 5.00 5 0 0 2 3 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCTT................................................. 23 1 1 5.00 5 2 1 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCCGCA.................................................. 22 1 1 5.00 5 2 1 1 0 1 0
............................................................................................TTCGTGGTCGACGAAACCTGC................................................... 21 1 1 5.00 5 0 0 4 1 0 0
............................................................................................TGAGTTGTCGACGAAACCTGCA.................................................. 22 2 1 4.00 4 0 0 0 4 0 0
............................................................................................TTCGGTGTCGACGAAACCTGCA.................................................. 22 1 1 4.00 4 0 0 4 0 0 0
............................................................................................TTCGTTGTCGAGGAAACCTGC................................................... 21 1 1 4.00 4 2 0 1 0 0 1
..................................................CGGGTTTCGTTAACAGCG................................................................................................ 18 0 1 4.00 4 3 0 1 0 0 0
............................................................................................TTCGTTGTCGACGCAACCTGCA.................................................. 22 1 1 4.00 4 1 0 2 0 0 1
............................................................................................TTCGTTGTCGACTAAACCTG.................................................... 20 1 1 4.00 4 4 0 0 0 0 0
............................................................................................TTCGTTGTCGATGAAACCTGCA.................................................. 22 1 1 4.00 4 3 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAC................................................. 23 1 1 4.00 4 0 0 0 4 0 0
............................................................................................TTCGTTGTCGACTAAACCTGCA.................................................. 22 1 1 4.00 4 2 0 2 0 0 0
...........................................................................................CTTCGTTGTCGACGAAACCTGC................................................... 22 1 1 4.00 4 1 1 1 0 0 1
..............................................................................................CGTTGTCGACGAAACCTG.................................................... 18 0 1 4.00 4 0 4 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAAA................................................ 24 2 1 4.00 4 0 1 0 3 0 0
............................................................................................TTCGTTGTCGGCGAAACCTG.................................................... 20 1 1 4.00 4 2 0 2 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGCT............................................................................................ 22 1 1 4.00 4 1 0 0 1 2 0
............................................................................................TTCGTTGACGACGAAACCTGCA.................................................. 22 1 1 4.00 4 0 0 3 1 0 0
............................................................................................TTCGTTGGCGACGAAACCTGCA.................................................. 22 1 1 4.00 4 0 0 4 0 0 0
............................................................................................TTCGTTGTTGACGAAACCTG.................................................... 20 1 1 4.00 4 1 3 0 0 0 0
............................................................................................TTCGATGTCGACGAAACCTGC................................................... 21 1 1 4.00 4 1 0 3 0 0 0
.............................................................................................TCGTTGTCGACGAAACCT..................................................... 18 0 1 3.00 3 0 3 0 0 0 0
............................................................................................TTCGTTGTCGAAGAAACCTGCA.................................................. 22 1 1 3.00 3 1 0 1 1 0 0
............................................................................................TTCGTTGTCGACGAATCCTGC................................................... 21 1 1 3.00 3 2 0 1 0 0 0
............................................................................................TTCTTTGTCGACGAAACCTGCA.................................................. 22 1 1 3.00 3 0 0 0 3 0 0
............................................................................................TTCGTGGTCGACGAAACCTGCA.................................................. 22 1 1 3.00 3 0 0 3 0 0 0
............................................................................................TTCGTTGTCGACGAGACCTG.................................................... 20 1 1 3.00 3 0 2 1 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCAA................................................. 23 2 1 3.00 3 0 0 0 3 0 0
............................................................................................TTCGTTGTCGACGAAACCAGC................................................... 21 1 1 3.00 3 1 0 2 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGTT.................................................. 22 2 1 3.00 3 1 0 2 0 0 0
............................................................................................TTCGTTGTCGACGAAGCCTGCA.................................................. 22 1 1 3.00 3 1 2 0 0 0 0
..................................................CGGGTTTCGTTAACAGCTGGCT............................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTCAA.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTGCAA................................................. 23 2 1 3.00 3 0 0 0 3 0 0
............................................................................................TTCGTTGTCGACTAAACCTTC................................................... 21 2 1 3.00 3 3 0 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGCAA................................................. 22 1 1 3.00 3 0 3 0 0 0 0
..................................................CGGGTTTCGTTAACACCGGGCT............................................................................................ 22 1 1 3.00 3 2 0 0 0 1 0
............................................................................................TTAGTTGTCGACGAAACC...................................................... 18 1 1 3.00 3 0 0 0 3 0 0
..................................................CTGGTTTCGTTAACAGCGGGC............................................................................................. 21 1 1 3.00 3 0 0 0 3 0 0
............................................................................................TTCGTAGTCGACGAAACCTGC................................................... 21 1 1 3.00 3 3 0 0 0 0 0
............................................................................................ATCGTTGTCGACGAAACCTG.................................................... 20 1 1 3.00 3 2 1 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACATGCA.................................................. 22 1 1 3.00 3 2 0 1 0 0 0
............................................................................................TTCGTTGTCTACGAAACCTTC................................................... 21 2 1 3.00 3 2 0 1 0 0 0
............................................................................................ATCGTTGTCGACGAAACCTGCA.................................................. 22 1 1 3.00 3 1 1 1 0 0 0
.............................................................................................TCCTTGTCGACGAAACCTGC................................................... 20 1 1 3.00 3 3 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTGT................................................... 21 2 1 3.00 3 0 1 2 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTGA................................................... 21 2 1 3.00 3 3 0 0 0 0 0
........................................................................................................GAAACCTGCATGCTGCGTTT........................................ 20 3 6 2.67 16 15 0 0 0 0 1
............................................................................................TTCGTTGGCGACGAAACCTG.................................................... 20 1 1 2.00 2 0 0 2 0 0 0
............................................................................................TGCGTTGTCGACGAAACC...................................................... 18 1 1 2.00 2 0 0 0 2 0 0
............................................................................................TTCGTTGTGGACGAAACCTGCG.................................................. 22 2 1 2.00 2 0 2 0 0 0 0
..................................................CGGGTTTCGTTAACAGCGGTCT............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TGAGTTGTCGACGAAACCTGC................................................... 21 2 1 2.00 2 0 0 0 2 0 0
.............................................................................................TCGTTGTCGACGAAACCTGT................................................... 20 1 1 2.00 2 0 1 1 0 0 0
............................................................................................TTCGTTGTCGACGAAATCTGCA.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
..................................................CGGGTTTTGTTAACAGCGGGCT............................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
............................................................................................TGCTTTGTCGACGAAACCTGC................................................... 21 2 1 2.00 2 0 0 0 2 0 0
..................................................CGGGTTTCGTTAACATCGGTCT............................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTTTCGACGAAACCCGC................................................... 21 2 1 2.00 2 0 0 2 0 0 0
............................................................................................TTCGTTGTTGACGAAACCTGT................................................... 21 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTTA................................................... 21 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CTCGTTGTCGACGAAACCTGCA.................................................. 22 1 1 2.00 2 1 1 0 0 0 0
..................................................CGGGGTTCGTTAACAGCGGGCT............................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
............................................................................................TTCGTTGTCGACGAAAC....................................................... 17 0 1 2.00 2 0 0 2 0 0 0
............................................................................................CTCGTTGTCGACGAAACCTGT................................................... 21 2 1 2.00 2 2 0 0 0 0 0
........................................................................................GATCTTCGTTGTCGACGAAACCTGC................................................... 25 3 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCC..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAACCCTGT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTTC................................................... 21 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGGTGCCGACGAAACCTGC................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..................................................CGGGTTTCGTTAATAGCGGGCT............................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
...........................................................................................GTTCGTTGTCGACGAAACCTGCA.................................................. 23 0 1 2.00 2 0 2 0 0 0 0
..................................................AGGGTTTCGTTAACAGCGGGCT............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACATGA................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..................................................CGGGTTTCGTCAACAGCGGGCT............................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
.............................................................................................TCGTTGTCCACGAAACCTGCA.................................................. 21 1 1 2.00 2 0 2 0 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTG.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTCCA.................................................. 22 1 1 2.00 2 1 0 0 0 1 0
............................................................................................TTCGTTGTCGACGAAACCTGAAT................................................. 23 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGCAAA................................................ 24 3 1 2.00 2 0 0 0 2 0 0
............................................................................................TTCGTTGTCGACGAACCCTG.................................................... 20 1 1 2.00 2 0 0 2 0 0 0
..................................................CGGGTTTCATTAACAGCGGGCT............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTGCAT................................................. 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................TTCGTTGTCTACGAAACCTGA................................................... 21 2 1 2.00 2 1 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCAAT................................................ 24 2 1 2.00 2 1 1 0 0 0 0
..................................................CGTGTTTCGTTCACAGCGGGCT............................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAAACTGT................................................... 21 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TACGTTGTCGACGAAACCTGCA.................................................. 22 1 1 2.00 2 0 1 0 1 0 0
............................................................................................TCCGTTGTCGACGAAACCTG.................................................... 20 1 1 2.00 2 1 1 0 0 0 0
............................................................................................TCCGTTGTCTACGAAACCTGC................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..................................................CGGGTTTCGTTAGCAGCGGGCC............................................................................................ 22 2 1 2.00 2 0 0 0 2 0 0
............................................................................................CTCGTTGTCGACCAAACCTGC................................................... 21 2 1 2.00 2 1 0 1 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTGCA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
............................................................................................TTCGTCGTCGACGAAACCTGCA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCATTAG.............................................. 26 3 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACAAAACCTGCA.................................................. 22 1 1 2.00 2 0 2 0 0 0 0
............................................................................................TTAGTTGTCGACGAAACCTGA................................................... 21 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCGG.................................................... 20 1 1 2.00 2 0 0 2 0 0 0
............................................................................................TTCGTTGTAGACGAAACCT..................................................... 19 1 1 2.00 2 0 0 2 0 0 0
............................................................................................TTCATTGTCGACGAAACCTGCA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
..................................................TGGGTTTCGTTAACAGCGGGCT............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTCGACGACACCT..................................................... 19 1 1 2.00 2 0 0 2 0 0 0
.............................................................................................TCGTTGTCAACGAAACCTGCA.................................................. 21 1 1 2.00 2 0 2 0 0 0 0
............................................................................................TACGTTGTCGACGAAACCTGC................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................CGGGTTTCGTTAACATCGGGC............................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTGCAA................................................. 23 2 1 2.00 2 0 2 0 0 0 0
........................................................................................................GAAACCTGCATGCTGCGTT......................................... 19 2 3 1.33 4 3 0 0 1 0 0
.............................................................................................TTCGTGTCGACGAAACCTGC................................................... 20 3 4 1.25 5 5 0 0 0 0 0
............................................................................................TTCGATGGCGACGAAACCTGCA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..................................................CGGGCTTCGTTAACAGCGGGCT............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGGTGTCGGCTAAACCTGCA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGGTGTCGACGAAACCT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCCACCAAACCTGC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTTGTTGTCGACGAAACATGC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................CGGGTTTCCTTATCAGCGGGCT............................................................................................ 22 2 1 1.00 1 0 0 0 0 1 0
............................................................................................TTCGTTGCCGCCGAAACCTGTA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TGCGTTGCCGACGAAACCTGCA.................................................. 22 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TTCGTTGTCGACGAAACCTACA.................................................. 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTGCAA................................................. 23 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACTTG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................CGGGTTTCGTTAACAGCGGT.............................................................................................. 20 1 1 1.00 1 0 0 0 0 0 1
............................................................................................TTCGTTGCCGACGAAACCTCC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TGCGATGTCGACGAAACCGGC................................................... 21 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGGATCCTG.................................................... 20 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTAGTTGCCGACGAAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCCTTGTCGACGAATCCTG.................................................... 20 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAATCTGAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTAGACGAAACCTCCA.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................TTTGTTGTCGACGAAACCTG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGCGTTGTCGACGAAACCTAC................................................... 21 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TTTGGTGTCGACGAAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................GTCGTTGTAGACGAAACGTGC................................................... 21 3 1 1.00 1 0 0 1 0 0 0
..................................................CTGTTTTCGTTAACAGCGGGCT............................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TTCGTTCTCGTCGAAACCTGAA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
...............................................................................................GTTGCCGACGAAACCTGCA.................................................. 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCCACGAAACCTGT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGACGACGCAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAATCCTGCA.................................................. 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACAT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGAAGAAACCTGCAA................................................. 23 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TGCGTTGTAGACGAAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................GTTGTCGACGAAACGTGC................................................... 18 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGACCACGAAACCCGC................................................... 21 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACTAACCCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TCTGTTGTCGACGAAACCTGC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGGT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGGCGACGAAACCTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGCCGAAACCTTC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..................................................CGGGTTTCGTTAACAGCGGGA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTTGACGAAACCGGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCATT................................................ 24 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTTCT.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................................................TTGTTGTCGACGAAACCTGCA.................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................CGGGTTTCGTTAACAGCTGGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TTTGTCGACGAAACCTGC................................................... 18 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTGCA.................................................. 22 1 1 1.00 1 0 0 1 0 0 0
..................................................CGTGTTTCGTTAACAGCGGGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGCAT................................................. 22 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGTTGTCGACGAAACCTGC................................................... 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGGTGTCGACGACACCTCCA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
...........................................................................................CTTCGTTGTCGACGAAAC....................................................... 18 1 1 1.00 1 0 0 1 0 0 0
............................................................................................ATCGTTGTCGACGCAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGTTCGTTGTCGACGAAACCTG.................................................... 22 1 1 1.00 1 0 1 0 0 0 0
........................................................................................CATTTTCGTTGTCGACGAAACCTG.................................................... 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................ATCGTTGGCGACGAAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................................................TCGTTGTCGACGAAACCTGTA.................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................CGGGTTTCGTTAACATCTTGCT............................................................................................ 22 3 1 1.00 1 0 0 0 0 1 0
............................................................................................TTCGTGGGCGACGAAACCTGCA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
............................................................................................CTCGTTGTCGACGAAACCTGCTT................................................. 23 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAGTCCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGGCGACTAACCCTGC................................................... 21 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAATCCTGCAA................................................. 23 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TTCGTTGTCGACTAAACCTGT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGATGAAACCT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGATACCTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGCTGTCGACGAAACCTGCC.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
.......................................................................................ACAAGTTCGTTGTCGACGAAACCTGC................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..................................................CGGGTTTCGTTAACAGAGGGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGATGTCGACGAAACCTGCA.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..................................................CGGGTTTCGTTAGCAGAGGGCT............................................................................................ 22 2 1 1.00 1 0 0 0 0 1 0
............................................................................................TTCGGTGTCGGCGAAACCTG.................................................... 20 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACTAAACCTCC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGTCGAAACCTTC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTGGACGAAACCTGCT.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................TTCGTTGACGACGAAACATTCA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TTAGTGGTCGACGAAACCTGCA.................................................. 22 2 1 1.00 1 0 0 0 1 0 0
............................................................................................TTCGGTATCGACGAAACCT..................................................... 19 2 1 1.00 1 0 0 1 0 0 0
..................................................AGGGTGTCGTTAACAGAGGGCT............................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
...................................................TGGTTTCGTTAACAGCGGTCT............................................................................................ 21 2 1 1.00 1 0 0 0 0 1 0
............................................................................................TTCGTTTTAGACGAAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGGTGTCGACTAAACCTGC................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTCTCGACGCAACCTGC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACGAAACCTGCACG................................................ 24 1 1 1.00 1 0 1 0 0 0 0
............................................................................................TTCGGTGTCGACGAAACCTGCAT................................................. 23 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TGCGTTGTCGACGATACCTG.................................................... 20 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGCCGACGAAACCTGCA.................................................. 22 1 1 1.00 1 0 1 0 0 0 0
............................................................................................TTCGTTGTCGACCAAACATGC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCGTTGTCGACTAGACCTTC................................................... 21 3 1 1.00 1 1 0 0 0 0 0
............................................................................................TTCATTGTCGACGAAACCT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGGTGTCGACGAAACCTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................TTCGTTGTCGACGAATCCTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0

Anti-sense strand reads

TAAATTTAATATCAAAATTCTTGACACAAAGTATTTCAGGAGTGACTTCGGCCCAAAGCAATTGTCGCCCGACAGTAAAGCTTTAGTTGTTCAAGCAACAGCTGCTTTGGACGTACGACACACCTTATTGTTGCAAATTATTTATTTATTTAGTGTAAATTTAA

************************************..(((.(((...((((((((((((((.((((((((((..................)))))))))).)))))))))))...)))))).)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M058

embryo

 M044

female body

 V055

head
........................................................................................................CTTTGGACGTACGACGCA.......................................... 18 1 1 1.00 1 1 0 0
.................................................GGCCCAAAGCAATTGTCGCCC.............................................................................................. 21 0 1 1.00 1 0 1 0
................................................CGGCCCAAAGCAATTGTCGCCC.............................................................................................. 22 0 1 1.00 1 1 0 0
........................................................................................................CTTTGGACGTACGACGCAA......................................... 19 2 3 0.33 1 1 0 0
..................................GTCAGGGGTGCCTTCGGCCCA............................................................................................................. 21 3 4 0.25 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12929:1586911-1587074 + dan_9 confident ATT-TA-----AAT-TATAGTTTTAAGAACTGTGTTTCA---------------T-------------------------AAAGTCCTCACTGAAGCCGGGTTTCGTTAACAGCGGGCTGTCATTTCGA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAATAACAACGTT-----------TAATAAATAAA----TAA----ATCACATTTAAATT
droBip1 scf7180000396543:52327-52507 + AAG--------AAACTTTAGTTTTAAGAAATGTTTTATGTTAAGTGTTATGTG-A-------------------------ATTATCCTCACTGAAGCCGGGTTTCGTTAACAGCGGACTGTCATTTCGA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAATGACAACGTT-----------TAATAAATAAA----TAAATAAATCGCATTTAAATT
droKik1 scf7180000302398:393006-393113 + TGT-C-------------------------------T---------------TAG-------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGTCTATAAT--------------TTTAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAAACAACGTT-----------CAA---------------------------------
droFic1 scf7180000453253:126108-126210 - --------------------------------------------------------------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTTTATTGT--------TATTAGCAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAACTCAACATT-----------------------------------------------
droEle1 scf7180000491043:308397-308511 + AAT-CA-----AA-------------------------------------------------------------------GAAGTCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTATAACC---------GTTTGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAAAGTCAACATTAAA--------CAA---------------------------------
droRho1 scf7180000779976:18397-18510 - --------------------------------------------------------------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACAAC-A--------ATTGGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAAAATCAACAAC-----------CCATCGATATA----T--------------------
droBia1 scf7180000301760:4274640-4274765 - --------------------------------------------------------------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACACTCT--------TTTCAACGAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------ACG---ATATCTACGTAAACA-----C-----TACT
droTak1 scf7180000415704:1276921-1277060 - TTT-AA-----AAT-AATA--CC-------------T---------------AAGAACA---------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACGTACT--------TTTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------ACG---ATAATCACATAA------------------
droEug1 scf7180000408994:414293-414435 - GTC-AA-----GTG-ATTAATTT-------------T---------------AAGGACA---ACTATAAAGCTC-----CTCGATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTCTTTACT--------TTTCAACTAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------TAA---------------------------------
dm3 chrX:1682884-1682989 - dme-mir-981 Known_mirbase --------------------------------------------------------------------------------AACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------
droSim2 x:1541019-1541124 - dsi-mir-981 Known_mirbase --------------------------------------------------------------------------------AACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------
droSec2 scaffold_10:1477759-1477864 - dse_18 confident --------------------------------------------------------------------------------AACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------
droYak3 X:1528068-1528169 - dya_89 confident ------------------------------------------------------------------------------------TCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAAAAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------
droEre2 scaffold_4644:1660962-1661060 - der_13 confident ------------------------------------------------------------------------------------TCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------------------------------------------
dp5 XL_group1a:4258921-4259020 - dps-mir-981 Known_mirbase --------------------------------------------------------------------------------AAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAGAAACAAC--------------------------------------------------
droPer2 scaffold_11:835055-835173 - dpe_26 confident TTT-CG-----AAT---------------CTTTGATGCG---------------A-------------------------AAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAGAAACAAC--------------------------------------------------
droWil2 scf2_1100000004909:4683232-4683333 + dwi_23 confident ----------------------------------------------------------------------------------AATCCACACTGAAATCGGGTTTCGCTAGCAGCGGACTGTCATGATAAATGTGAAAAACAAACAAGTTCGTTGTCGACGAAACCTGCATCATGTGTCGGA---------------------CAA---------------------------------
droVir3 scaffold_12942:51462-51599 + dvi-mir-981 Known_mirbase TTT-TA-----AAT-AAGT--GT-------------A---------------AAGAAAA---ACGGAAGAGCTTTATTTAACAATCTACATTGAACTCAGATTTCGTCAGCAGCGGGCTGTGATGATT----------ATGAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAGTGGCAAC--------------------------------------------------
droMoj3 scaffold_6328:4397456-4397588 + dmo_26 confident GTT-TATTTTTTTT-AATA--T-------C------T---------------GTGGATAAAAA---T------------AGTAATCTACATTGAACTCAGGTTTCGTTAGCAACGGGCTGTGATGATTA--------AAAGAACAAGTTCGTTGTCGACGAAACCTGCATGCTATGTGGAGAGGCAAC--------------------------------------------------
droGri2 scaffold_14853:795247-795430 + dgr_59 candidate-rescued ATTATATTA--TAT-TGTATATTTGAGAAA--------------------------------ACCGACGAGGTCTGTAGTGTGTTCCACATTGAGCTCGGGTTTCGTCAGCAGCGGGCTGTGATGACT---------AAAAAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAGAGTCAACGAGT--TCCGCTTCTGATCAATTAA----ATG----GACATATGTAATAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ATT-TA-----AAT-TATAGTTTTAAGAACTGTGTTTCA---------------T-------------------------AAAGTCCTCACTGAAGCCGGGTTTCGTTAACAGCGGGCTGTCATTTCGA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAATAACAACGTT-----------TAATAAATAAA----TAA----ATCACATTTAAATTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................21120626.0020626831139539455018608
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2212509.002509120527193614659
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................201964.00964451201782331
.................................................................................................CGGGTTTCGTTAACAGCGGGCT.......................................................................................................................221670.0067012312292603
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211318.003185001146193
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................211224.0022400070217
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231162.001623039120072
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................211131.0013113100000
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................191130.00130292075024
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................201108.0010895000013
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................23164.0064112021426
.................................................................................................CGGGTTTCGTTAACAGCGGGC........................................................................................................................21160.00601304052
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................22137.00377118020
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19131.00313100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................22121.0021510708
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................18117.00171000016
..................................................................................................GGGTTTCGTTAACAGCGGGCT.......................................................................................................................21115.00150020013
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................20114.0014300407
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................21114.00141001012
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................20111.00111100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................22110.0010500401
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................18110.0010090001
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2019.009000009
.................................................................................................CGGGTTTCGTTAACAGCGGGCC.......................................................................................................................2219.009080001
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1919.009600003
.................................................................................................CGGGTTTCGTTAACAGCGGG.........................................................................................................................2018.008000008
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................2316.006100203
.................................................................................................CGGGTTTCGTTAACAGCG...........................................................................................................................1814.004000103
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................2314.004040000
.....................................................................................................................................................CGTTGTCGACGAAACCTG.......................................................................1814.004400000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................2414.004130000
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1813.003300000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTT.....................................................................2213.003000201
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2213.003300000
....................................................................................................................................................TCGTTGTCGACGAAACCTGT......................................................................2012.002100100
...................................................................................................................................................TTCGTTGTCGACGAAACCTTA......................................................................2112.002000002
...................................................................................................................................................TTCGTTGTCGACGAAAC..........................................................................1712.002000200
...................................................................................................................................................TTCGTTGTCGACGAAACCC........................................................................1912.002000002
..................................................................................................................................................GTTCGTTGTCGACGAAACCTGCA.....................................................................2312.002200000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT...................................................................2412.002100001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATTAG.................................................................2612.002000002
.................................................................................................CGGGTTTCGTTAACAGCGGT.........................................................................................................................2011.001000010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGGT.....................................................................2211.001000001
.................................................................................................CGGGTTTCGTTAACAGCGGGA........................................................................................................................2111.001000001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2411.001000100
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAT....................................................................2211.001000100
..............................................................................................................................................ACAAGTTCGTTGTCGACGAAACCTGC......................................................................2611.001000001
droBip1
AAG--------AAACTTTAGTTTTAAGAAATGTTTTATGTTAAGTGTTATGTG-A-------------------------ATTATCCTCACTGAAGCCGGGTTTCGTTAACAGCGGACTGTCATTTCGA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAATGACAACGTT-----------TAATAAATAAA----TAAATAAATCGCATTTAAATTSizeHit CountTotal NormTotal
No Reads
droKik1
TGT-C-------------------------------T---------------TAG-------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGTCTATAAT--------------TTTAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAAACAACGTT-----------CAA---------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------------------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTTTATTGT--------TATTAGCAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAACTCAACATT-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAT-CA-----AA-------------------------------------------------------------------GAAGTCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTATAACC---------GTTTGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAAAGTCAACATTAAA--------CAA---------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------------------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACAAC-A--------ATTGGACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAAAATCAACAAC-----------CCATCGATATA----T--------------------SizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------------------------------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACACTCT--------TTTCAACGAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------ACG---ATATCTACGTAAACA-----C-----TACTSizeHit CountTotal NormTotal
No Reads
droTak1
TTT-AA-----AAT-AATA--CC-------------T---------------AAGAACA---------------------AAAATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTACGTACT--------TTTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------ACG---ATAATCACATAA------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTC-AA-----GTG-ATTAATTT-------------T---------------AAGGACA---ACTATAAAGCTC-----CTCGATCCTCACTGAAGTCGGGTTTCGTTAACAGCGGGCTGTTCTTTACT--------TTTCAACTAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------TAA---------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------------------------------------AACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................221126486.00126486000077021131477221461804000472390000600067710441104023111200010000000000001010007240000000000000000066342222194271192279080515687501393710114546640132442175295507728306763312962583218267671263101332121153661482109611448446829511392812751041378125000000020015130300100100000000000000061845405035351372857449711044268840201266683010000078901808000060600000000000000000132112130210370031138005965055430131064374115121671000282200120367280018343227100104302050200218415823541915181314216382000167022560003022100011200231146740601023400
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................211114701.0011470100005083010533270723020970000504147178296923781680000000101000000100000112000000000000000001010870701360111717127711877293458035111181754112109981621563585040101471315263522911534121131800209909692646938738577495900000000009135000100300000000000000036803390019532052873272482321081472145677968600000823154125000018019000000000000000003601400000000500110000132201242725651713142471873912125455109638140030183271085361061007254101001008011218925512198481543159365220020217112421602001247140011169068393161478121920014800
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................20124654.002465400005400000030014005600005000219359739196600000000000000000000001100000000000000000000002466200007421523113057214170148226530082686391142180565102716612310441364835160000000000000000000000000000000000001679175407105479111234010892622009308417600000239860100005000000000000000000000020000000000000000210161553000463151220000241000001110223100000000000010013013715435801331100005024000000000000000019600100000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................2318318.008318000076101170132010022300000000000000000000000000000000000000000000000000000000021211251617710152873131328340892510253161265840094983755110612028131951501401412340714854800000000002000000000000000000000000051048202311010024471734210032612000002783000000000000000000000000000100000000005005915002001200100191022110000012001010100192500002110100000002912216703322000004041000000000002002006500000000100
.................................................................................................CGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2216481.006481000020010000000000000000010540000000000000000000000000003000000000000000000000001110340070125241500217125600001233032610223101111810300209140000000000120371000000005000000000000335102895202812175652995200000747060000109000000000000000001001000000015013000055540155740142840101010294201004501201549311001667170023006474202481082181802485012105022351530123135040333943665241477275103972913186432182641042041400
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATC...................................................................2415384.005384000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033752008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................1913437.003437000000000000000000100000010018731603300000000000000000000000000000000000000000000007000000011037305341212201353100045144200030201422132101043698105000000000000000000000000000000000000383465022301146993518168114230000055000000000000000000000000000000000000000000000000002150000080000000400000000010100000000000000009413340010000000000000000000000000000800000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................2211906.001906000000000000001000000000000000000000000000000000000000000000000000000000000000006601020030013511512311200032100011310010001728016622908422020711225174000000000000000000000000000000000000182740531011002060700000013000000000000000000000000000000000000000000000001003360000432020000210000202006120000000000000000100111100000000101000000000000000000100000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................2311898.0018980000250000001002000500000000000000000000000000000000000000110000000000000000010002000010020068701398640281556200013046016100001411060972503312813000000000010000000000000000000000000112105051002632430331331000009000000000000000000000000000000000000000100017100000011702102910907000011600001010080100000000000000011418143400011000003020000000100000000006500100000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................2111347.001347000016000000100010000000000000000000000000000000000000000000000000000000000000000390000000100540122110000820003110001000422150140641002511624000000000000000000000000000000000000384302400264415629206710000097300000000100000000000000000000000000000000000000001261000668080000011000011000311000020000000000048294791001000000030030000000000001010113100000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................2211044.0010440000300000000000012000000000000000000000000000000000000000000000000000000000120010031300067111930537110103200100227530101140156020516016123900000000000000000000000000000000000080720420011511921703300000070000000100000000000000000000000000000000000110001012200041300000000000020000601000000000000000012240200000000100000000000000000000700000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGC........................................................................................................................211823.008230000000000000003000000000003100000000000000000000000000000000000000000000000000000000001000000000000000000000000000011000010000000000000000010800000000000000000000006202450153115000000002020000002000000000000001000000000000000071000024035710012501002044110167010064250001000000000220311417323901310000012023100003515180411703860212210021361200
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................211692.00692000025000110200000010000000000000000000000000000000000000000000000000000000000000200000010003031301001054000220300000021521061017102509061000000000000000000000000000000000000021230120011260151440700000006100000000000000000000000000000000000000000000100000113000031803000009000000000000000000001000000016623160000000000200000000000000000000500000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................211633.006330000400000010000000000000000000000000000000000000000000000000000000000000000000011000100730219085603002216100022710051200087010125012091400000000000000000000000000000000000043250150027270370801200000042000000000000000000000000000000000000000000000000000300001300000001000010000000000000000000000002220001000000100000000000000000000300000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................221436.00436000010101010400200030000000000000000000000000000000000000000000000000000000000001161012002001300119031125850002610071110184010111040710000000000000000000000000000000000003030016005110801003410000023000000000000000000000000000000000000000000000000000200003302000001000000000003000000000000000025140000000000000000000000000000000100000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................201362.0036200002000000000000000000000001000000000000000000000000000000000000000000000000000200000030003002300001042000000100000323220707515070640000000000000000000000000000000000001631070019230221807000000220000000000000000000000000000000000000000000000000009000021101000003000000000000000000000000000042640000000000000000000000000000000500000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGG.........................................................................................................................201287.00287000000000000000000000000010000010110000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000140110012000701000000000000010000000000000000000000000000000110000000000010001601000000000019000030210000000000000000342121000160000010000000003300253171112811201010000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................231276.002760000200000010000001000000000000000000000000000000000000000000000000000000000000080000002000903150100019000001001600000204000105050613000000000000000000000000000000000000191501000250203060000006000000000000000000000000000000000000000000022000000000000300000000000001000001000000000000000010020000000000100000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................181239.00239000000000000000000000000000031220300000000000000000000000100000000000000000000002000000000060029000000471000500000000030000000039820000000000000000000000000000000000001140210622231815160000036000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................201229.0022900000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000310000000324128210000000000000000000000000000000000001080500000101010000003000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000060000000000000000000000000000000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................221202.002020000200000000000000000000000000000000000000000000000000000000000000000000000000030000004003110142211207300001804040130010000000020100000000000000000000000000000000000001060500530704010000007100000000000000000000000000000000000000000000000000000000301000011000000000100000000000000000001100000000100000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................211195.00195000030000000001000000000000000000000000000000000000000000000000000000000000000001200000000007003000000700000000100000280100123000230000000000000000000000000000000000001260600750201902930000017000000000000000000000000000000000000000000000000000400002700000003000000000000000000000000000012220000000000000000000000000010000000000000000
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................181169.0016900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321060245010310000000000000000000000000000000000008130500970400010000003100100000000000000000000000000000000000000000000100050000040000000100000000000000000000000000000441100000000000000000000000000000100400000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................241163.0016300001000000000000010000000000000000000000000000000000000000000000000000000000000200000000003011500010039100080102000002000000000040000000000000000000000000000000000000121305001408080120000005000000000000000000000000000000000000000000011000000000003101000002000000000000000000000000000010100100000000100000000000000000000100000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA....................................................................231140.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000400000020006011300000020000000000000122001000002322370000000000000000000000000000000000001570400000000000000000000000000000000000000000000000000000000000000000000200000500000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TCGGGTTTCGTTAGCAGCGGGC........................................................................................................................221137.00137000000000000000100000000000014011000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000121016011110000000000000000000000000000000000000000000000001000000000030000020000001000000110000000000000000000001174401100000002010000000100000302025400010000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................231113.0011300003000010000000000000000000000000000000000000000000000000000000000000000000000100000020101009010000240000110302010000300000002001000000000000000000000000000000000000690300200014080000002000000000100000000000000000000000000000000101000000000001101000000000000000200000000000000000000100000000000000000000000000000000300000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTT.....................................................................221106.0010600000000000000000000000000000000000000000000000000000000000000000000000000000000240000000000600000000005000010000000000000000001021000000000000000000000000000000000000030100020300020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGATC....................................................................231106.0010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19198.009800000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000120000000000000010000000031300000000000000000000000000000000000001570100411214040200000013000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................19187.008700000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000500001010100100000000000000000000000000000000000058061071307000000000013000000000000000000000000000000000000000000000000100001000000000000000000000200000130000000000002140100000000000000000000000000000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCG...........................................................................................................................18179.007900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000100000000000000000000000000000000000000000000000000001000000010000000100000000000000000000000000000000000000000000000000000000000000000000007000024010000000000000000221100204000000000000000020000000012200000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................20168.00680000100000000000000000000000000000000000000000000000000000000000000000000000000030000000000100100000000000000000000020000000021530000000000000000000000000000000000006803005302010420000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTA.......................................................................20161.0061000030000000000000000000000000000000000000000000000000000000000000000000000000004000000000030000000005000000000000002010000000011000000000000000000000000000000000000540400040325030000008000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001010000000000000000000000000000000000000000000
..................................................................................................GGGTTTCGTTAGCAGCGGGCT.......................................................................................................................21158.00580000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000302001010000000000010000000000000000000000000000000000000000000000000000000000000000000000101001000000100000000000432125000000002021000100000001403001200000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCTA....................................................................23152.00520000000000000000000000000000000000000000000000000000000000000000000000000000000040000000100100130000019000110001000001000000101010000000000000000000000000000000000000360500000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT...................................................................24152.0052000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000001300002000000000110000000000100000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000001213000000000001100000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................20148.0048000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020013204000000000000000000000000000000000000000000000000000000000000000320200330500010000006000000000000000000000000000000000000000000000002000000000000000000000000000011000030000000000000210000000000000000000000000000000000000000000
droSim2
--------------------------------------------------------------------------------AACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................20119993.001999319743574731410800200100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................2119626.0096269295346554112001814012308002
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2217704.0077047016503825022010526505906001
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................1913350.00335029028481441100000000102
.................................................................................................CGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2211660.001660113054080060000011001000
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................1811162.0011629602130917800000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231893.0089384124520000020100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................221429.004294192700000010000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGC........................................................................................................................211328.0032827943500800000200000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................221286.0028625732600000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCC.......................................................................................................................221226.0022617704900000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................231172.001721670410000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................211154.001541500310000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................221131.001311212700000000100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................231100.00100940010400000100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211100.00100972010000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21174.0074740000000000000000
................................................................................................TCGGGTTTCGTTAGCAGCGGGC........................................................................................................................22173.0073710100000000100000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCG.......................................................................................................................22155.00553402100000000000000
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................18136.0036321300000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCG........................................................................19132.0032320000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCC........................................................................19232.0064640000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21129.0029210240200000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20126.0026210040100000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19123.0023221000000000000000
.......................................................................................................................................................TTGTCGACGAAACCTGCAA....................................................................19121.0021210000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................23121.0021200100000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................24119.0019160100000110000000
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................19119.0019190000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................22117.0017160100000000000000
.................................................................................................CGGGTTTCGTTAGCAGCG...........................................................................................................................18116.0016000021400000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTG.......................................................................18113.0013130000000000000000
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................18111.0011110000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGG..........................................................................................................................19110.0010000001000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1819.00950000400000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2419.00990000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCTT......................................................................................................................2318.00880000000000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1917.00750000100000100000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2017.00770000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................2017.00760010000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2017.00770000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCTA......................................................................................................................2315.00511200000000100000
...................................................................................................................................................TTCGTTGTCGACGAAACT.........................................................................1815.00550000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCACT...................................................................2415.00550000000000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCAA....................................................................2115.00550000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGG.........................................................................................................................2015.00520000300000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAC....................................................................2214.00440000000000000000
......................................................................................................................................................GTTGTCGACGAAACCTGCAA....................................................................2014.00430100000000000000
................................................................................................TCGGGTTTCGTTAGCAGC............................................................................................................................1813.00310000200000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGAC.......................................................................................................................2213.00330000000000000000
................................................................................................TCGGGTTTCGTTAGCAGCG...........................................................................................................................1913.00300000300000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTA.......................................................................2013.00330000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGG........................................................................................................................2113.00330000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAAA..................................................................2512.00220000000000000000
..................................................................................................GGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2112.00200200000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCACA...................................................................2412.00220000000000000000
................................................................................................TCGGGTTTCGTTAGCAGCGGGCC.......................................................................................................................2312.00220000000000000000
................................................................................................TCGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2312.00220000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGGG.......................................................................................................................2212.00210100000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCT.....................................................................2112.00220000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCC.....................................................................2112.00220000000000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGGC.......................................................................................................................2212.00220000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATC...................................................................2411.00110000000000000000
droSec2
--------------------------------------------------------------------------------AACATCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................21113672.00136722452218713218
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2212713.00271340392762025
.................................................................................................CGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2211028.001028312501512
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................201551.0055115014396
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................231372.003721364349
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231201.0020115310173
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211162.00162610155
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................19194.0094120082
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21180.008010079
.................................................................................................CGGGTTTCGTTAGCAGCGGGC........................................................................................................................21171.0071031751
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21154.0054410112
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20150.0050240125
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................18126.002600224
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................22121.002110218
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19118.001816002
................................................................................................TCGGGTTTCGTTAGCAGCGGGC........................................................................................................................22116.001601015
..................................................................................................GGGTTTCGTTAGCAGCGGGCT.......................................................................................................................21115.001500510
.................................................................................................CGGGTTTCGTTAGCAGCGGG.........................................................................................................................20111.00110047
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................2419.0090018
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................2319.0090018
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................2319.0090009
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................2118.0084004
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2018.0080026
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................2218.0081016
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2017.0076001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................2216.0060006
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAT....................................................................2215.0051004
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2215.0052003
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTT.....................................................................2214.0040004
.................................................................................................CGGGTTTCGTTAGCAGCGGGCC.......................................................................................................................2213.0030012
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2413.0031002
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................2013.0031002
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCTA....................................................................2312.0020002
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1912.0021001
.....................................................................................................................................................CGTTGTCGACGAAACCTG.......................................................................1812.0022000
................................................................................................TCGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2312.0020002
................................................................................................TCGGGTTTCGTTAGCAGCGGG.........................................................................................................................2112.0020002
...................................................................................................................................................TTCGTTGTCGACGAAACCTGACC....................................................................2321.5030003
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTC.....................................................................2211.0010001
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................1811.0010001
.................................................................................................CGGGTTTCGTTAGCAGCGG..........................................................................................................................1911.0010001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGAC.....................................................................2211.0010001
.................................................................................................CGGGTTTCGTTAGCAGCGGGCTT......................................................................................................................2311.0011000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATA...................................................................2411.0010001
......................................................................................................................................................GTTGTCGACGAAACCTGCAA....................................................................2011.0010001
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1811.0010001
.................................................................................................CGGGTTTCGTTAGCAGCG...........................................................................................................................1811.0010001
.................................................................................................CGGGTTTCGTTAGCAGCGGT.........................................................................................................................2011.0010001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATTT..................................................................2511.0010001
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................1911.0010001
...................................................................................................................................................TTCGTTGTCGACGAAACCGC.......................................................................2011.0010001
...................................................................................................................................................TTCGTTGTCGACGAAACCTCA......................................................................2111.0010001
.................................................................................................CGGGTTTCGTTAGCAGCGGGCTC......................................................................................................................2311.0010001
droYak3
------------------------------------------------------------------------------------TCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAAAAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------CAA---------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2215137.005137167248218996436964640010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................2114500.0045001798316543696691093120000
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................2012374.00237420141191618913500000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................221823.008234961167117132630000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231451.00451243161084285200000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................221225.00225189713051100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................231176.0017614922102200000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................231153.00153436133315700000
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................191149.001491041410141600000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCC.......................................................................................................................221146.001469205400000000
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................181121.001218803300000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................221108.0010855016082900000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................21194.00945100276100000
.................................................................................................CGGGTTTCGTTAGCAGCGGGC........................................................................................................................21191.00915401892520010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................22171.0071621102500000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21158.0058446110600000
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20144.0044140000300000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................21131.0031290100100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................23121.0021112103400000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCG.......................................................................................................................22117.0017170000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21114.001480112200000
.................................................................................................CGGGTTTCGTTAGCAGCGGGCTT......................................................................................................................2319.00980100000000
...................................................................................................................................................TTCGTTGTCGACGAAACCC........................................................................1918.00880000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................1918.00825001000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2218.00880000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1917.00734000000000
................................................................................................TCGGGTTTCGTTAGCAGCGGGC........................................................................................................................2217.00740002100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................2016.00601101300000
...................................................................................................................................................TTCGTTGTCGACGAAAC..........................................................................1716.00600000600000
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................1816.00620000400000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2015.00503100100000
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1815.00505000000000
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................1815.00541000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGG.........................................................................................................................2014.00400010200010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCACA...................................................................2414.00440000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAT....................................................................2214.00402000200000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAC...................................................................2414.00410100200000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA....................................................................2314.00410101100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................2413.00310100100000
...................................................................................................................................................TTCGTTGTCGACGAAACCG........................................................................1913.00330000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT...................................................................2413.00300200100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGAC.....................................................................2212.00220000000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGT........................................................................................................................2112.00210010000000
......................................................................................................................................................GTTGTCGACGAAACCTGCAA....................................................................2012.00210001000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTT.....................................................................2212.00220000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATA...................................................................2412.00220000000000
..................................................................................................GGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2112.00210010000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTA.......................................................................2012.00210001000000
.................................................................................................CGGGTTTCGTTAGCAGCGGGAC.......................................................................................................................2212.00210100000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2412.00210000100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCTC....................................................................2311.00110000000000
droEre2
------------------------------------------------------------------------------------TCCTCACTGAAGTCGGGTTTCGTTAGCAGCGGGCTGTTTTAATAA--------ATTCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAAAATCAACGCT-----------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................21121489.00214894587911479954196520
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2214377.004377978278584633124430
.................................................................................................CGGGTTTCGTTAGCAGCGGGCT.......................................................................................................................2211148.00114821745621310090
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................201730.00730235075024180
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231337.00337361051202380
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................231235.0023522335011740
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................211113.00113102030080
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211106.00106301901830
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21196.009610600890
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20195.0095460300460
.................................................................................................CGGGTTTCGTTAGCAGCGGGC........................................................................................................................21184.008413620720
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................19164.0064160300450
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................18140.004010000390
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................22133.0033021800130
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................22128.002853320150
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19126.002624000020
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................19119.001930100150
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................23118.00182540070
................................................................................................TCGGGTTTCGTTAGCAGCGGGC........................................................................................................................22117.001700100160
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................23116.001630300100
..................................................................................................GGGTTTCGTTAGCAGCGGGCT.......................................................................................................................21114.001400101120
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................22112.001200100110
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................19112.00121020090
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................20110.00104010050
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................2019.0090010080
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................2418.0080010070
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2218.0081110050
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................1818.0081500020
.................................................................................................CGGGTTTCGTTAGCAGCGGGCC.......................................................................................................................2218.0080800000
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2016.0061000050
.................................................................................................CGGGTTTCGTTAGCAGCGGG.........................................................................................................................2015.0050010040
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................1815.0050000050
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2414.0041010020
.................................................................................................CGGGTTTCGTTAGCAGCGGGT........................................................................................................................2113.0030010020
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA....................................................................2313.0030030000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAT...................................................................2413.0030000030
....................................................................................................................................................TCGTTGTCGACGAAACCTGCT.....................................................................2113.0031000020
...................................................................................................................................................TTCGTTGTCGACGAAACCTCA......................................................................2112.0020000020
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1812.0022000000
.....................................................................................................................................................CGTTGTCGACGAAACCTG.......................................................................1812.0021000010
.................................................................................................CGGGTTTCGTTAGCAGCGGGA........................................................................................................................2112.0020000020
....................................................................................................................................................TCGTTGTCGACGAAACCTGA......................................................................2012.0021000010
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAG....................................................................2212.0021000010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAGT...................................................................2412.0020010010
......................................................................................................................................................GTTGTCGACGAAACCTGCAA....................................................................2012.0020010010
.....................................................................................................................................................CGTTGTCGACGAAACCTGCAA....................................................................2112.0021000010
................................................................................................TCGGGTTTCGTTAGCAGC............................................................................................................................1812.0020000020
...................................................................................................................................................TTCGTTGTCGACGAAACTGC.......................................................................2061.3380000080
.....................................................................................................................................................CGTTGTCGACGAAACCTGCC.....................................................................2011.0010000010
....................................................................................................................................................TCGTTGTCGACGAAACCTGCATT...................................................................2311.0011000000
dp5
--------------------------------------------------------------------------------AAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAGAAACAAC--------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................21111733.001173321527144774616518701100268
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2219261.009261220469095098194789301219
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................2012235.00223551263672802290004
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231430.004301863722856100012
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................191407.0040726823110240000
.................................................................................................CGGGTTTCGTTAACAGCGGGCT.......................................................................................................................221291.00291125919148584000
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................181285.00285019275000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................211185.00185017608010000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211157.0015701502801131000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................231154.0015401801091240002
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................201143.00143013802030000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................221140.0014001241004180002
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................221129.00129043994190000
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................191125.00125012401000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................231112.0011207794040000
...................................................................................................................................................TTCGTTGTCGACGAAACCC........................................................................19146.004600046000000
.................................................................................................CGGGTTTCGTTAACAGCGGGC........................................................................................................................21127.002700231370002
.................................................................................................CGGGTTTCGTTAACAGCGGGCC.......................................................................................................................22123.002300167000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21118.001804040100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................23118.00180223030008
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................20115.001501002030000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................21113.001301010200000
.................................................................................................CGGGTTTCGTTAACAGCGGG.........................................................................................................................20112.00120002190000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................22112.001201001010000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................20110.00100900010000
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................19110.00100603000001
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1818.0080800000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2417.0070114000001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................2217.0070401020000
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................1817.0070201220000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTT.....................................................................2216.0060201030000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................2415.0050013010000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA....................................................................2315.0050103010000
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................1915.0050001100003
....................................................................................................................................................TCGTTGTCGACGAAACCTGT......................................................................2013.0030300000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTA.......................................................................2013.0030100020000
.....................................................................................................................................................CGTTGTCGACGAAACCTG.......................................................................1812.0020200000000
..................................................................................................GGGTTTCGTTAACAGCGGGCT.......................................................................................................................2112.0020000110000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCC....................................................................2312.0020101000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGAC.....................................................................2212.0020011000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCC.....................................................................2112.0020200000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAC....................................................................2212.0020200000000
.................................................................................................CGGGTTTCGTTAACAGCGG..........................................................................................................................1912.0020000011000
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2011.0010001000000
droPer2
TTT-CG-----AAT---------------CTTTGATGCG---------------A-------------------------AAAATCCACATTGAAATCGGGTTTCGTTAACAGCGGGCTGTTATGAATA--------AATCAACAAGTTCGTTGTCGACGAAACCTGCATGCTGTGTGGAGAAACAAC--------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................2113596.0035962637411113461630109
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2211470.001470126287505164883
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................201616.006162426011341970
.................................................................................................CGGGTTTCGTTAACAGCGGGCT.......................................................................................................................221342.0034214112475983
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211202.00202090351517
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231114.001142515030440
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................19147.004712209150
.................................................................................................CGGGTTTCGTTAACAGCGGGC........................................................................................................................21144.004418027170
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20144.00440410210
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................23137.003715115141
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21130.00300270030
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................22130.00301300980
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19125.00251230100
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................22124.00241141350
.................................................................................................CGGGTTTCGTTAACAGCGGG.........................................................................................................................20120.00200006113
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21119.00190107101
.................................................................................................CGGGTTTCGTTAACAGCGGGCC.......................................................................................................................22111.0011900101
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................1919.009210222
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1918.008020600
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................2317.007120220
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................2117.007230110
.................................................................................................CGGGTTTCGTTAACAGCGGGCG.......................................................................................................................2216.006600000
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................1815.005001220
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................2215.005200120
...................................................................................................................................................TTCGTTGTCGACGAAACCTCT......................................................................2114.004000220
.................................................................................................CGGGTTTCGTTAACAGCGG..........................................................................................................................1913.003000030
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2213.003020100
..................................................................................................GGGTTTCGTTAACAGCGGGCT.......................................................................................................................2113.003001020
...................................................................................................................................................TTCGTTGTCGACGAAACCTTT......................................................................2112.002010010
.................................................................................................CGGGTTTCGTTAACAGCG...........................................................................................................................1812.002000020
.................................................................................................CGGGTTTCGTTAACAGCGGGT........................................................................................................................2112.002000110
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................1812.002200000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2012.002010010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................2412.002000110
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTT.....................................................................2212.002000110
................................................................................................TCGGGTTTCGTTAACAGCGGGC........................................................................................................................2212.002000110
....................................................................................................................................................TCGTTGTCGACGAAACCT........................................................................1812.002020000
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................2012.002000200
.................................................................................................CGGGTTTCGTTAACAGCGGT.........................................................................................................................2012.002000020
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTC.....................................................................2211.001000100
...................................................................................................................................................TTCGTTGTCGACGAAACCTGGC.....................................................................2211.001010000
...................................................................................................................................................TTCGTTGTCGACGAAACCTCA......................................................................2111.001010000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGTTC....................................................................2311.001000010
.......................................................................................................................GTTATGAATA--------AATCAACAAG...........................................................................................2011.001000010
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2011.001000010
droWil2
----------------------------------------------------------------------------------AATCCACACTGAAATCGGGTTTCGCTAGCAGCGGACTGTCATGATAAATGTGAAAAACAAACAAGTTCGTTGTCGACGAAACCTGCATCATGTGTCGGA---------------------CAA---------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................21118076.001807644012001826113196
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2219560.0095606753685106281484
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................2015515.00551552657205173
.................................................................................................CGGGTTTCGCTAGCAGCGGACT.......................................................................................................................2212100.00210055320604941
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231784.007846443201989
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................191432.00432402100020
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................181326.003263250001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................221196.001961881124
.................................................................................................CGGGTTTCGCTAGCAGCGGAC........................................................................................................................211170.0017014700815
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................231122.001221211000
................................................................................................TCGGGTTTCGCTAGCAGCGGACT.......................................................................................................................231109.001093301867
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21182.00821020070
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................22178.0078740004
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................23175.00752650440
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21168.0068658004
................................................................................................TCGGGTTTCGCTAGCAGCGGAC........................................................................................................................22166.00664500021
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................21157.00571500141
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................21151.0051490002
.................................................................................................CGGGTTTCGCTAGCAGCGGACC.......................................................................................................................22147.0047440012
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................22142.0042331008
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20135.00352170016
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................19125.0025500020
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................18123.0023300119
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................23121.0021180003
..................................................................................................GGGTTTCGCTAGCAGCGGACT.......................................................................................................................21120.0020000515
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................19118.0018400014
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................18114.0014130001
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAAA...................................................................24114.0014130001
................................................................................................TCGGGTTTCGCTAGCAGCGGA.........................................................................................................................21113.0013000013
.................................................................................................CGGGTTTCGCTAGCAGCGGACG.......................................................................................................................22112.0012120000
.......................................................................................................................................................TTGTCGACGAAACCTGCAA....................................................................1918.00880000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2018.00831004
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2017.00701015
......................................................................................................................................................GTTGTCGACGAAACCTGCAA....................................................................2016.00640002
.......................................................................................................................GTCATGATAAATGTGAAAAACA.................................................................................................2216.00620004
...................................................................................................................................................TTCGTTGTCGACGAAACCC........................................................................1925.5011110000
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................1915.00503002
...................................................................................................................................................TTCGTTGTCGACGAAACCG........................................................................1914.00440000
..................................................................................................................................................GTTCGTTGTCGACGAAACCTGCC.....................................................................2314.00440000
.................................................................................................CGGGTTTCGCTAGCAGCGGA.........................................................................................................................2014.00400004
..................................................................................................................................................GTTCGTTGTCGACGAAACCTGC......................................................................2213.00300030
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCACT...................................................................2413.00330000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2213.00320001
..................................................................................................................................................GTTCGTTGTCGACGAAACCTGCT.....................................................................2313.00330000
................................................................................................TCGGGTTTCGCTAGCAGCGG..........................................................................................................................2013.00310002
................................................................................................TCGGGTTTCGCTAGCAGCGGACC.......................................................................................................................2312.00220000
.................................................................................................CGGGTTTCGCTAGCAGCGGAA........................................................................................................................2112.00200002
.....................................................................................................TTTCGCTAGCAGCGGACT.......................................................................................................................1812.00220000
.......................................................................................................................................................TTGTCGACGAAACCTGCAT....................................................................1912.00220000
................................................................................................TCGGGTTTCGCTAGCAGCGGAT........................................................................................................................2212.00200002
...................................................................................................................................................TTCGTTGTCGACGAAACCTCA......................................................................2112.00201010
.....................................................................................................TTTCGCTAGCAGCGGACC.......................................................................................................................1811.00110000
.......................................................................................................................................................TTGTCGACGAAACCTGCGA....................................................................1911.00110000
.......................................................................................................................GTCATGATAAATGTGAAA.....................................................................................................1811.00110000
droVir3
TTT-TA-----AAT-AAGT--GT-------------A---------------AAGAAAA---ACGGAAGAGCTTTATTTAACAATCTACATTGAACTCAGATTTCGTCAGCAGCGGGCTGTGATGATT----------ATGAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAGTGGCAAC--------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................22110262.00102622510156324420310801000001154741281577543286308299390470143840321853202770010250010000000000102122201875870001833910331281016920221610
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................2117933.0079331510733331290290467350001738527272613427231128078670020099111481441189000014000001000000100011002012349000510429000010936
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................2013543.003543301553169105000000001651687317513710843073450100026728411860100600000000000000000000125000000132100010000
.................................................................................................CAGATTTCGTCAGCAGCGGGCT.......................................................................................................................2212349.002349591635111602314090000191013211743161400000111141902300000130110100006265127421380491401900001505124211401
.................................................................................................CAGATTTCGTCAGCAGCGGGC........................................................................................................................211974.0097423806820100010000421200121100000321401400000200000000000010310752521100000002000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................191381.003812237421000000000078913510182000000110002000000000000000000000006004000000003000000010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................231357.0035705113600000000002520612540192112101452811241030000000000000000000001190000201763520303761712
.................................................................................................CAGATTTCGTCAGCAGCGGGCC.......................................................................................................................221266.002661124905000000000000000000000000000000000000000000000000000000010000000000000000000
....................................................................................TCTACATTGAACTCAGATTTCGTCAGC...............................................................................................................................271198.0019800000000100000000000000003300017000014700000000000000000000000000000000000000000000
....................................................................................TCTACATTGAACTCAGATTTCGTCAGCA..............................................................................................................................281163.0016300000000000000000000000002000010000013300000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................221162.00162091501000000003283611111456000002004010000040000000000000000000010100010000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTT......................................................................................................................231146.00146196300000010000010111027000003401020000040000000000000000000012600000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................221124.00124177510000000000150212013001002001000000000000000000000000020013000001000201000011
.................................................................................................CAGATTTCGTCAGCAGCG...........................................................................................................................181111.0011129900000000000000000010000000000202000000000000000000000000005000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGACGA.............................................................................251110.001100000000050000000000000000120001500007800000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................181106.0010619105000000000010100001000000000000000000000000000000001111100000000000100000000
.................................................................................................CAGATTTCGTCAGCAGCGGG.........................................................................................................................20196.00961124004000000001011113200000079160131000030000000000000000000020500000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................21186.008605200300000000690363049000002100020000010000000000000000000030000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGG..........................................................................................................................19178.007833610040000000000000060000000120108000005000000000000000000009200000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................23176.0076385000000000006232231220000021121000000000000000000000000020016100000000000001100
.................................................................................................CAGATTTCGTCAGCAGCGGGCG.......................................................................................................................22172.007246400000000000000000000000000000000000000000000000000000000301000000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21166.006601600000000000012000000100000000100000000000000000000000000000000000000000000000
.............T-AAGT--GT-------------A---------------AAGAAAA---ACGGAAGAGC......................................................................................................................................................................25164.0064000000002600000000000000003000600002900000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................22157.005724610000000000000001000000000010000000000000000000000000000006000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGACGAA............................................................................26153.0053000000002000000000000000013000700003100000000000000000000000000000000000000000000
.............T-AAGT--GT-------------A---------------AAGAAAA---ACGGAAGAGCT.....................................................................................................................................................................26145.0045000000012100000000000000003000100001900000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGT.........................................................................................................................20145.0045012000204000000000000200000000002010000000000000000000000000014800000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20144.004400380000000000000100000200000000000000000000000000000000000003000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGACGAAA...........................................................................27144.004400000000000000000000000006000200003600000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGT..........................................................................................................................19137.0037022100000000000100000010000001000000000010000000000000000000010000000000000000000
....................................................................................TCTACATTGAACTCAGATTTCGTCA.................................................................................................................................25136.003600000000000000000000000006000600002400000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGTT.........................................................................................................................20133.0033016000100000000001001210000000000000000000000000000000000000011000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................21129.002902610000000000001000000000000000000000000000000000000000000001000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTC......................................................................................................................23126.00269200010000000000000010000000100202000002000000000000000000300200000010000000000
.............T-AAGT--GT-------------A---------------AAGAAAA---ACGGAAGAGCTT....................................................................................................................................................................27125.0025000000001200000000000000001000200001000000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................23125.002511022000000000012000001000000010000000000000000000000000000001000010000000001002
.................................................................................................CAGATTTCGTCAGCAGCGGGT........................................................................................................................21121.00210520000104000001001000100000010100000000000000000000000000004000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21121.00210310000000000011104102000000000000000000000000000000000000007000000000000000000
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................18120.00200100000000000013112102200000000100000000000000000000000001004000000000000000000
..................................................................................................AGATTTCGTCAGCAGCGGGCT.......................................................................................................................21119.001901400000000000010000000000000000101000000000000000000000000002000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTTA.....................................................................................................................24116.001601600000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................20114.00140140000000000000001102100000000000000000000000000000000001003000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGTT........................................................................................................................21113.00130300000001000000000000000000100001000000000000000000000000007000000000000000000
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................19112.00120000000000000010011001200000001100000001000000000000000000003000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGTA.........................................................................................................................20110.00100500000000000000100000000000000000000000000000000000000000004000000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19110.00100090000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCC........................................................................1919.0090900000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGACG..............................................................................2419.0090000000000000000000000000200010000600000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTTC.....................................................................................................................2418.0080700000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................1818.0080500000000000000000000000000001100000000000000000000000000001000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTA......................................................................................................................2318.0080600000000000010000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAG....................................................................2317.0070310000000000000100000000000000100000000000000000000000000001000000000000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2017.0071030000000000000000000000000110000000000000000000000000000001000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCT...........................................................................................................................1817.0070700000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TCTACATTGAACTCAGATTTCGTCAG................................................................................................................................2616.0060000000010000000000000000000020000300000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGTTT........................................................................................................................2136.001805000000000000000000000000000000000000000000000000000000000011200000000000000000
...........................................................................................................................................TGAACAAGTTCGTTGTCGACGAAACC.........................................................................2616.0060000000000000000000000000000000000600000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTGT.....................................................................................................................2416.0060600000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGACGAAAC..........................................................................2815.0050000000000000000000000000000000000500000000000000000000000000000000000000000000
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2215.0050300000000000010000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTC.......................................................................2015.0050000000000000000000000100000000000000000000000000000000000004000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGC.........................................................................................................................2015.0050300000000000000000000000000000000000000000000000000000000002000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGACGAAACC.........................................................................2915.0050000000000000000000000000400000000100000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGA........................................................................................................................2114.0040200000000000000000100000000000000000000000000000000000000001000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGG........................................................................................................................2114.0040400000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGA..........................................................................................................................1914.0040100000000000000000000000000000000000000000000000000000000003000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAAC..........................................................................1714.0040000000000000000000000000000000000000000000000000000000000004000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2414.0040101000000000000000000000000000000000000000000000000000000001000000000100000000
............AT-AAGT--GT-------------A---------------AAGAAAA---ACGGAAGAGC......................................................................................................................................................................2614.0040000000010000000000000000000010000200000000000000000000000000000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGA................................................................................2213.0030000000000000000000000000000000000300000000000000000000000000000000000000000000
................................................................................................TCAGATTTCGTCAGCAGCGGGC........................................................................................................................2213.0030200000000000000000010000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGTG........................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000003000000000000000000
.....................................................................................................................................................CGTTGTCGACGAAACCTG.......................................................................1813.0030020000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCC....................................................................2313.0031000000000000000000000000000110000000000000000000000000000000000000000000000000
..................................................................................................AGATTTCGTCAGCAGCGGGCTT......................................................................................................................2213.0030100000000000000000000000000000000000000000000000000000000001100000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTA.......................................................................2013.0030110000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................TT----------ATGAACAAGTTCGTTGTCGAC...............................................................................2313.0030000000000000000000000000100000000200000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA....................................................................2313.0030000000000000010001000000000000000100000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGAC.......................................................................................................................2212.0020100000000000000000010000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGA.........................................................................................................................2012.0020100000000000000000000000000000000000000000000000000000000001000000000000000000
........................................................................................CATTGAACTCAGATTTCGTCAGCAGC............................................................................................................................2612.0020000000000000000000000000000000000200000000000000000000000000000000000000000000
.......................................................................................................................GTGATGATT----------ATGAACAAG...........................................................................................1812.0020000000000000001000000000000000100000000000000000000000000000000000000000000000
....................................................................................TCTACATTGAACTCAGATTTCGTC..................................................................................................................................2412.0020000000000000000000000000100000000100000000000000000000000000000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCTA....................................................................2312.0020000000020000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTAA.....................................................................................................................2412.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGTA........................................................................................................................2112.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCA.......................................................................................................................2212.0020100000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................ATTTCGTCAGCAGCGGGCT.......................................................................................................................1912.0020010000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................TCAGATTTCGTCAGCAGCGGGCT.......................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
...................................................................................................................................................TTCGTTGTCGACGAAACCGC.......................................................................2012.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
......................................................................................................................................................GTTGTCGACGAAACCTGCT.....................................................................1912.0020000000000000010000000000000010000000000000000000000000000000000000000000000000
..................T--GT-------------A---------------AAGAAAA---ACGGAAGAGCTTTA..................................................................................................................................................................2512.0020000000020000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAGATTTCGTCAGCAGCGGGCTG......................................................................................................................2312.0020110000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
GTT-TATTTTTTTT-AATA--T-------C------T---------------GTGGATAAAAA---T------------AGTAATCTACATTGAACTCAGGTTTCGTTAGCAACGGGCTGTGATGATTA--------AAAGAACAAGTTCGTTGTCGACGAAACCTGCATGCTATGTGGAGAGGCAAC--------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................2112880.00288043717986126316116
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................2212537.002537839273316007337
.................................................................................................CAGGTTTCGTTAGCAACGGGCT.......................................................................................................................221334.0033442934562083
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................201322.003221410809830
...................................................................................................................................................TTCGTTGTCGACGAAACCTGT......................................................................211159.0015940698501
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21186.00867801340
.................................................................................................CAGGTTTCGTTAGCAACGGGC........................................................................................................................21182.00822300770
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAA....................................................................23163.00632501116110
.................................................................................................CAGGTTTCGTTAGCAACGGGCC.......................................................................................................................22153.00530000530
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................20149.00494701100
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................23148.0048190111521
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................19143.0043200111110
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCC.....................................................................22137.00371020790
...................................................................................................................................................TTCGTTGTCGACGAAACCTGA......................................................................21121.00210021900
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................22117.0017402470
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................19113.00131300000
..................................................................................................AGGTTTCGTTAGCAACGGGCT.......................................................................................................................21111.0011111440
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................18110.0010100090
......................................................................................................................................................GTTGTCGACGAAACCTGC......................................................................1817.007101500
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAA....................................................................2217.007201400
.................................................................................................CAGGTTTCGTTAGCAACGGGCTT......................................................................................................................2316.006001140
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1915.005301100
.....................................................................................................................................................CGTTGTCGACGAAACCTGCA.....................................................................2015.005500000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................2315.005100130
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCG.....................................................................2215.005001400
...................................................................................................................................................TTCGTTGTCGACGAAAC..........................................................................1713.003000300
.................................................................................................CAGGTTTCGTTAGCAACGGG.........................................................................................................................2013.003001200
...................................................................................................................................................TTCGTTGTCGACGAAACCTT.......................................................................2012.002001100
..................................................................................................AGGTTTCGTTAGCAACGGGC........................................................................................................................2012.002000110
...................................................................................................................................................TTCGTTGTCGACGAAACCTGG......................................................................2112.002101000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATT...................................................................2412.002101000
......................................................................................................................................................GTTGTCGACGAAACCTGCA.....................................................................1912.002002000
.................................................................................................CAGGTTTCGTTAGCAACGGGCTC......................................................................................................................2312.002000020
.......................................................................................................................................................TTGTCGACGAAACCTGCA.....................................................................1812.002001100
...................................................................................................................................................TTCGTTGTCGACGAAACCTGAC.....................................................................2211.001000010
.....................................................................................................................................................CGTTGTCGACGAAACCTGCAA....................................................................2111.001100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCTGA...................................................................2411.001000100
..................................................................................................................................................GTTCGTTGTCGACGAAACCTG.......................................................................2111.001100000
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCATCT..................................................................2511.001000100
..................................................................................................................................................GTTCGTTGTCGACGAAACCTGCA.....................................................................2311.001100000
.................................................................................................CAGGTTTCGTTAGCAACGGGT........................................................................................................................2111.001000100
....................................................................................................................................................TCGTTGTCGACGAAACCTGCACC...................................................................2311.001100000
....................................................................................................GTTTCGTTAGCAACGGGCT.......................................................................................................................1911.001000010
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCCA....................................................................2311.001001000
.................................................................................................CAGGTTTCGTTAGCAACGGGCTA......................................................................................................................2311.001001000
droGri2
ATTATATTA--TAT-TGTATATTTGAGAAA--------------------------------ACCGACGAGGTCTGTAGTGTGTTCCACATTGAGCTCGGGTTTCGTCAGCAGCGGGCTGTGATGACT---------AAAAAACAAGTTCGTTGTCGACGAAACCTGCATACTGTGTGGAGAGTCAACGAGT--TCCGCTTCTGATCAATTAA----ATG----GACATATGTAATACSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCA.....................................................................221105.001051050
...................................................................................................................................................TTCGTTGTCGACGAAACCTGC......................................................................21183.0083794
...................................................................................................................................................TTCGTTGTCGACGAAACCTG.......................................................................20131.0031310
....................................................................................................................................................TCGTTGTCGACGAAACCTGCA.....................................................................21110.0010100
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAT....................................................................2316.00660
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCT.....................................................................2214.00440
....................................................................................................................................................TCGTTGTCGACGAAACCTGC......................................................................2013.00330
...................................................................................................................................................TTCGTTGTCGACGAAACCT........................................................................1913.00330
....................................................................................................................................................TCGTTGTCGACGAAACCTG.......................................................................1913.00330
....................................................................................................................................................TCGTTGTCGACGAAACCTGCAT....................................................................2212.00220
.....................................................................................................................................................CGTTGTCGACGAAACCTGC......................................................................1912.00220
..................................................................................................................................................GTTCGTTGTCGACGAAACCTGCA.....................................................................2311.00110
...................................................................................................................................................TTCGTTGTCGACGAAACC.........................................................................1811.00110
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCACT...................................................................2411.00110
...................................................................................................................................................TTCGTTGTCGACGAAACCTGCAC....................................................................2311.00110

Generated: 10/20/2015 at 07:33 PM