ID:

dan_898

 Coordinate:

scaffold_12943:959568-959718 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3 -14.2 -14.2

Flybase annnotation

exon [dana_GLEANR_704:4]; CDS [Dana\GF22773-cds]; intron [Dana\GF22773-in]

No Repeatable elements found

mature
star
  1. scaffold_2050:1768-1794 -
  2. scaffold_12943:953845-953871 -
  3. dan_898  scaffold_12943:959680-959706 +
  4. scaffold_12943:964617-964643 +
  5. scaffold_13340:17420712-17420738 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGGAAGAGGGAGGAGGGATGCCACTCAATTATATTACCGATGAGGAAGTTTGAAGAACTTGGGAAGTTTTTGGATACAGAGCAATGAATGTATATATAGTAAGTAAAGTTAGTTATTAGTTTACATAGTTATTTATTACATTAGTATATTATATTAGTTTTTCTATTTCTATTAATATTCCAAATTCTTTTTTCCATAAAGTCGTTTAACGGTGCGCAGCCGCCACCACCCGGTGAGCCACAAGCTTATCC
********************************************************************..((((...((((.(((.((((((.(((((.(((((((....(((.((((.......)))).)))..)))).))).))))))))))).))).))))...))))..................************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V055
head
 V106
head
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGC.................................... 26 0 4 8.00 32 13 8 11 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGT...................................... 24 0 4 5.00 20 7 11 0 2 0 0
...............................................................................................................................................................................................................................CACCACCCGGTGAGCCACAAGCTTATC. 27 0 1 4.00 4 4 0 0 0 0 0
....................................................................TTTGGATACAGAGCAATGAATGT................................................................................................................................................................ 23 0 1 3.00 3 0 0 0 3 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGCGC.................................. 28 0 4 3.00 12 5 4 3 0 0 0
..................TGCCACTCAATTATATTACCGATGAG............................................................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0
......................................................................................................................................................................................................AAGTCGTTTAACGGTGCGCAGCCGCC........................... 26 0 1 3.00 3 3 0 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGC.................................. 24 0 4 2.75 11 4 1 3 3 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGCG................................... 27 0 4 2.50 10 2 8 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTG..................................... 25 0 4 2.25 9 0 5 2 2 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGC.................................... 25 0 4 2.25 9 5 1 2 1 0 0
....................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGC............................... 24 0 4 2.25 9 9 0 0 0 0 0
...................................................................TTTTGGATACAGAGCAATGAAT.................................................................................................................................................................. 22 0 1 2.00 2 0 0 2 0 0 0
................................ATTACCGATGAGGAAGTTTGAAGAACT................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGG....................................... 23 0 4 2.00 8 1 2 5 0 0 0
..................................................................TTTTTGGATACAGAGCAATGAAT.................................................................................................................................................................. 23 0 1 2.00 2 0 0 1 1 0 0
....................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGCCG............................. 26 0 1 2.00 2 0 2 0 0 0 0
..................................................................TTTTTGGATACAGAGCAATGAATGTA............................................................................................................................................................... 26 0 1 2.00 2 0 0 0 2 0 0
....................................................................TTTGGATACAGAGCAATGAATGTAT.............................................................................................................................................................. 25 0 1 2.00 2 0 0 1 1 0 0
........................................................................................................................................................................................................................CAGCCGCCACCACCCGGTGAG.............. 21 0 1 2.00 2 0 2 0 0 0 0
.....................................CGATGAGGAAGTTTGAAGAACTT............................................................................................................................................................................................... 23 0 1 2.00 2 0 0 2 0 0 0
..................................................................TTTTTGGATACAGAGCAATGAATGT................................................................................................................................................................ 25 0 1 2.00 2 0 0 2 0 0 0
...............................................................................................................................................................................................................................CACCACCCGGTGAGCCACAAGCTTATCC 28 0 1 2.00 2 0 2 0 0 0 0
....................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGCC.............................. 25 0 4 1.75 7 6 0 0 1 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGCGCA................................. 29 0 4 1.25 5 0 5 0 0 0 0
..........................................................................TACAGAGCAATGAATGTATATATAGT....................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
............................................GAAGTTTGAAGAACTTGGGAAGT........................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
....................................................................TGTGGATACAGAGCAATGAATGTAT.............................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................CGCCACCACCCGGTGAGCCACAAGCTT.... 27 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCAGC............................... 27 0 4 1.00 4 3 1 0 0 0 0
..................................................................TTTTTGGATACAGAGCAATGAA................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
..................TGCCACTCAATTATATTACCGATGAGG.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
.....................................CGATGAGGAAGTTTGAAGAACTTGG............................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................................................................CACCCGGTGAGCCACAAGCTTATC. 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................ACCACCCGGTGAGCCACAAGCTTATCC 27 0 1 1.00 1 0 1 0 0 0 0
.....................CAATCAATTATATTACCGATGAG............................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
......................................................................TGGATACAGAGCAATGAATG................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1
..................................................TTAAGAACTTGGGAAGTTTT..................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................ACCACCCGGTGAGCCACAAGCTTATC. 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GCCGCCACCACCCGGTGAGCCACAAG....... 26 0 1 1.00 1 1 0 0 0 0 0
.................ATGCCACTCAATTATATTACCGATGAG............................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
.................................................................GTTTTTGGATACAGAGCAATGAATGT................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TGGTAAGTAAAGTTAGTTATTAGC................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGCGCA................................. 28 0 4 1.00 4 0 4 0 0 0 0
................................ATTACCGATGAGGAAGTTTGAAGA................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................ACCACCCGGTGAGACGCCAGC...... 21 3 1 1.00 1 0 0 0 0 1 0
..............................................................GAAGTTTTTGGATACAGAGCAATGAATG................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0
................................ATTACCGATGAGGAAGTTTGAAG.................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................TCGTTTAACGGTGCGCAGCCGCCA.......................... 24 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................................CGCTACCACCCGGTGAGCCACAAGCT..... 26 1 1 1.00 1 1 0 0 0 0 0
............GGGGGATGCCACTCAATTATATTACCGA................................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................CACCCGGTGAGCCACAAGCTTATCC 25 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................AAAGTCGTTTAACGGTGCGCAGCCGC............................ 26 0 1 1.00 1 0 1 0 0 0 0
............GAGGGATGCCACTCAATTATATTACCGAT.................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
..................................................................TTTTTGGATACAGAACAATGAATGTA............................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
.................................TTACCGATGAGGAAGTTTGAAGAA.................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
..................................................................TTTCTGGATACAGAGCAATGAATG................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAAGAACTTGGGAAGTT....................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...............................................GTTTGAAGAACTTGGGAAGTTTTTTTA................................................................................................................................................................................. 27 2 1 1.00 1 0 0 1 0 0 0
....AGAGGGAGGAGGGATGCCACTCA................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................GCCACCACCCGGTGAGCCACAAGCTTA... 27 0 1 1.00 1 0 1 0 0 0 0
....................................................................TTTGGATACAGAGCAATGAAT.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
......................................................................TGGATACAGAGCAATGAATGT................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0
..........................................................................TACAGAGCAATGAATGTATATATAGC....................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
....................................................................TTTGGATACAGAGCCATGAATGTA............................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0
.....GAGGGAGGAGGGATGCCACTCAATTA............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGCGC.................................. 27 0 4 0.75 3 2 1 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCAG................................ 26 0 4 0.75 3 0 3 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGC.................................... 22 0 4 0.75 3 0 1 1 1 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGG....................................... 22 0 4 0.75 3 1 1 1 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGCG................................... 26 0 4 0.75 3 0 3 0 0 0 0
.............................................................................................................................................................................................TGTTCCATAAAGTCGTTTAACGGT...................................... 24 1 4 0.75 3 3 0 0 0 0 0
.....................................................................................................................................................................................................AAAGTCGTTTAACGGTGCGCAGC............................... 23 0 4 0.75 3 0 2 1 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCA................................. 25 0 4 0.75 3 1 1 1 0 0 0
...........................................................................................ATATATAGTAAGTAAAGTTAGTT......................................................................................................................................... 23 0 5 0.60 3 3 0 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCG................................... 23 0 4 0.50 2 1 0 0 1 0 0
....................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCA................................. 22 0 4 0.50 2 0 1 1 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGT...................................... 23 0 4 0.50 2 1 1 0 0 0 0
.............................TACATTACCGCTGAGGGAGT.......................................................................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 1 0
................................................................................................................................................................................................TCCATAAAGTCGTTTAACGGTGCGC.................................. 25 0 4 0.50 2 2 0 0 0 0 0
..............................................................................................................................................................................................TGTCCATAAAGTCGTTTAACGGTGCGC.................................. 27 1 4 0.50 2 2 0 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGT.................................. 24 1 4 0.50 2 0 1 0 1 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCAGCC.............................. 28 0 4 0.50 2 0 2 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTG..................................... 24 0 4 0.50 2 0 2 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAATTCTTTTAACGTTG..................................... 24 3 4 0.25 1 0 0 1 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGA.................................. 24 1 4 0.25 1 0 1 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTACCTGAGCG................................... 23 3 4 0.25 1 0 0 1 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACTGTGC.................................... 25 1 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAAC......................................... 20 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGTTTCGC.................................. 27 2 4 0.25 1 0 0 1 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCTTTTAACGGTGCG................................... 26 1 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................................TGTCCATAAAGTCGTTTAACGGTGC.................................... 25 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACTGTGC.................................... 26 1 4 0.25 1 0 0 1 0 0 0
.............................................................................................................................................................................................TGTTCCATAAAGTCGTTTAACGG....................................... 23 1 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCTC.................................. 24 1 4 0.25 1 0 0 1 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCCC.................................. 24 1 4 0.25 1 0 0 0 1 0 0
.............................................................................................................................................................................................TTTTCCATGAAGTCGTTTAACGGT...................................... 24 1 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................................TTCCCATAAAGTCGTTTAACGGT...................................... 23 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACTGTG..................................... 25 1 4 0.25 1 0 0 1 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGTA................................... 26 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTCCCATAAAGTCGTTTAACGGTGCGC.................................. 27 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGGGC.................................... 26 1 4 0.25 1 0 1 0 0 0 0
................................................................................................................................................................................................TCCATAAAGTCGTTTAACGGTGCGCA................................. 26 0 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTTC.................................... 25 1 4 0.25 1 0 0 1 0 0 0
.................................................................................................................................................................................................CGATAAAGTCGTTTAACGGTGCGCAGC............................... 27 1 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGCCGTTTAACGGTGCGC.................................. 27 1 4 0.25 1 0 0 0 1 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACAGTGCGC.................................. 24 1 4 0.25 1 0 0 1 0 0 0
.............................................................................................................................................................................................TTTGCCATAAAGTCGTTTAACGGT...................................... 24 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACG........................................ 22 0 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAATTCGTTTAACGTTG..................................... 24 2 4 0.25 1 0 0 1 0 0 0
.................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTCCG................................... 23 1 4 0.25 1 0 0 0 1 0 0
...................................................................................................................................................................................................ATAAAGTCGTTTAACGGTGCGCAG................................ 24 0 4 0.25 1 0 1 0 0 0 0
.............................................................................................................................................................................................TTTTCCATGAAGTCGTTTAACGGTGCG................................... 27 1 4 0.25 1 0 1 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGTTGC.................................... 26 1 4 0.25 1 0 0 1 0 0 0
.............................................................................................................................................................................................TGTTCCATAAAGTCGTTTAACGGTGC.................................... 26 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACTGTTC.................................... 26 2 4 0.25 1 0 0 1 0 0 0
....................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGCT.............................. 25 1 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................................TCTCCATAAAGTCGTTTAACGGT...................................... 23 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGC...................................... 24 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTTC.................................... 26 1 4 0.25 1 0 0 1 0 0 0
..............................................................................................................................................................................................TTTCCATAGAGTCGTTTAACGGTGCGCA................................. 28 1 4 0.25 1 0 1 0 0 0 0
...........................................................................................................................................................................................TTTTTTCCATAAAGTCGTTTAACGGC...................................... 26 1 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................................................................................TAATGTCGTTTAACGGTGCGCAGC............................... 24 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTTCATAAAGTCGTTTAACAGTGC.................................... 26 2 4 0.25 1 0 0 1 0 0 0
....................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAG................................ 23 0 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGCTGC.................................... 25 1 4 0.25 1 0 0 1 0 0 0
............................................................................................................................................................................................TTTTTCCATAAAGTCGTTTAACGGTG..................................... 26 0 4 0.25 1 0 1 0 0 0 0
...............................................................................................................................................................................................TTCCATAAAGTCGTTTAACGGTG..................................... 23 0 4 0.25 1 0 1 0 0 0 0
................................................................................................................................................................................................TCCATAAAGCCGTTTAACGGTGCGC.................................. 25 1 4 0.25 1 0 0 1 0 0 0
..................................................................................................................................................................................................................CGTGCGCAGCCGCCACCACC..................... 20 1 9 0.22 2 2 0 0 0 0 0
.............................................................................................................................................................................................TGTTCCATAAAGTCGTTTAACGTC...................................... 24 3 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................CTATTTCTATTAATATTCCAAATTCTT.............................................................. 27 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................................................................................TATTAATATTCCAAATTCTTTTTT.......................................................... 24 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................TCTATTTCTATTAATATTCCAAATT................................................................. 25 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................................................................................ATTTCTATTAATATTCCAAATTCTT.............................................................. 25 0 5 0.20 1 1 0 0 0 0 0
...........................................................................................ATATATAGTAAGTAAAGTTAGTTAT....................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
.....................................................................................................................................................................TTTCTATTAATATTCCAAATTCTTTT............................................................ 26 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................TCTATTTCTATTAATATTCCAAATTC................................................................ 26 0 5 0.20 1 1 0 0 0 0 0
........................................................................................TGTATATATAGTAAGTAAAGTTAGTT......................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................TCTATTTCTATTAATATTCCAAAT.................................................................. 24 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTCCATAAAGTCGCTTAACGGTGC.................................... 26 1 5 0.20 1 1 0 0 0 0 0
.......................................................AACTAGGGAAGTCTTTGG.................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 1 0
....AGAGGGAGGAGGGTTGCT..................................................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0
...........................................................TGGGATGTTTTTAAATACAGA........................................................................................................................................................................... 21 3 8 0.13 1 0 0 0 0 1 0
..GACGTGGGAGGAGGGATG....................................................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 1 0
AGGGAGAGGTAAGAGGGATG....................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 1 0 0 0 0
...AAGAGTGAGGAGGGACCCC..................................................................................................................................................................................................................................... 19 3 15 0.07 1 1 0 0 0 0 0
....................................................................TTTGGGTACACAGCAATGT.................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0
.................................................TCGAATAACTTGGGAAGGT....................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
.............................................................................................................................................................................................TTTTCCATAAATTCGATTAACC........................................ 22 3 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

TCCTTCTCCCTCCTCCCTACGGTGAGTTAATATAATGGCTACTCCTTCAAACTTCTTGAACCCTTCAAAAACCTATGTCTCGTTACTTACATATATATCATTCATTTCAATCAATAATCAAATGTATCAATAAATAATGTAATCATATAATATAATCAAAAAGATAAAGATAATTATAAGGTTTAAGAAAAAAGGTATTTCAGCAAATTGCCACGCGTCGGCGGTGGTGGGCCACTCGGTGTTCGAATAGG
**************************************************************..((((...((((.(((.((((((.(((((.(((((((....(((.((((.......)))).)))..)))).))).))))))))))).))).))))...))))..................******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V039
embryo
 V106
head
 V055
head
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGGTATT.................................................... 26 0 5 17.80 89 28 4 29 19 9 0
..............CCCTACGGTGAGTTAATATAATGGCT................................................................................................................................................................................................................... 26 0 1 15.00 15 14 1 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGTATT.................................................... 25 0 5 11.80 59 47 1 9 2 0 0
...............................................................................TCGTTACTTACATATATATCATTCATT................................................................................................................................................. 27 0 2 6.00 12 8 4 0 0 0 0
...............CCTACGGTGAGTTAATATAATGGCT................................................................................................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0 0
................................................................................CGTTACTTACATATATATCATTCATT................................................................................................................................................. 26 0 2 4.00 8 8 0 0 0 0 0
..............................................TCAAACTTCTTGAACCCTTCAAAAACCT................................................................................................................................................................................. 28 0 1 4.00 4 3 1 0 0 0 0
..............................................................................CTCGTTACTTACATATATATCATTCATT................................................................................................................................................. 28 0 1 4.00 4 2 2 0 0 0 0
....................................................TTCTTGAACCCTTCAAAAACCTATGT............................................................................................................................................................................. 26 0 1 4.00 4 3 1 0 0 0 0
................CTACGGTGAGTTAATATAATGGCT................................................................................................................................................................................................................... 24 0 1 4.00 4 3 1 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGTATTT................................................... 26 0 5 3.80 19 13 1 5 0 0 0
...............................................................................TCGTTACTTACATATATATCATTCAT.................................................................................................................................................. 26 0 2 3.00 6 5 0 0 1 0 0
..............CCCTACGGTGAGTTAATATAATGGCTACT................................................................................................................................................................................................................ 29 0 1 3.00 3 3 0 0 0 0 0
...............................................CAAACTTCTTGAACCCTTCAAAAACCT................................................................................................................................................................................. 27 0 1 3.00 3 2 1 0 0 0 0
...........CCTCCCTACGGTGAGTTAATATAAT....................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0
...................................................CTTCTTGAACCCTTCAAAAACCTATGT............................................................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0 0
.....................................................TCTTGAACCCTTCAAAAACCTATGT............................................................................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0
..............CCCTACGGTGAGTTAATATAATGGCTA.................................................................................................................................................................................................................. 27 0 1 3.00 3 1 2 0 0 0 0
.................................................................................................................................................................................................................................GGTGGGCCACTCGGTGTTCGAAT... 23 0 1 3.00 3 0 3 0 0 0 0
.................................................................................................................................................................................AAGGTTTAAGAAAAAAGGTATTTCAG................................................ 26 0 5 2.60 13 8 3 1 1 0 0
..........................................................................................................TCAATCAATAATCAAATGTATCAATAAAT.................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0
.....................................................CCTTGAACCCTTCAAAAACCTATGT............................................................................................................................................................................. 25 1 1 2.00 2 2 0 0 0 0 0
............................................................CCCTTCAAAAACCTATGTCTCGTTACT.................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0
........CCTCCTCCCTACGGTGAGTTAATATAAT....................................................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0
.....................................................TCTTGAACCCTTCAAAAACCTATGTCT........................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
..........TCCTCCCTACGGTGAGTTAATATAAT....................................................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0
...................CGGTGAGTTAATATAATGGCTACTC............................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.....................................................TCTTGAACCCTTCAAAAACCTATGTC............................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0
..............................................CCAAACTTCTTGAACCCTTCAAAAACCT................................................................................................................................................................................. 28 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................................................................................ATTATAAGGTTTAAGAAAAAAGGTATT.................................................... 27 0 5 2.00 10 7 3 0 0 0 0
.............................................................................................................................................................................................................................CGGTGGTGGGCCACTCGGTGTTCGAAT... 27 0 1 2.00 2 0 2 0 0 0 0
................CTACGGTGAGTTAATATAATGGCTACT................................................................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0
................................................................TCAAAAACCTATGTCTCGTTACTTACAT............................................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0
.......................................................................................................................................................................................................TCAGCAAATTGCCACGCGTCGGCGG........................... 25 0 1 2.00 2 0 2 0 0 0 0
.................................................................CAAAAACCTATGTCTCGTTACTTACAT............................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
..................................................................................................................................................................................AGGTTTAAGAAAAAAGGTATTTCAG................................................ 25 0 5 1.80 9 5 4 0 0 0 0
...........................................................................................................................................................................AATTATAAGGTTTAAGAAAAAAGGTATT.................................................... 28 0 5 1.60 8 6 2 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGTAGT.................................................... 25 1 5 1.40 7 7 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGGTATTT................................................... 27 0 5 1.20 6 1 0 5 0 0 0
.........................................................GAACCCTTCAAAAACCTATGTCTCGTT....................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
....................GGTGAGTTAATATAATGGCTACTCCTT............................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................TCAATCAATAATCAAATGTATCAATAA...................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................GCGGTGGTGGGCCACTCGGTGTTCGAAT... 28 0 1 1.00 1 0 1 0 0 0 0
................CTACGGTGAGTTAATATAATGGTT................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........CATCCTCCCTACGGTGAGTTAATAT.......................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
..............CCCTACAGTGAGTTAATATAATGGCTACT................................................................................................................................................................................................................ 29 1 1 1.00 1 0 1 0 0 0 0
.....CTCCCTCCTCCCTACGGTGAGTT............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................ATTGGTGGTGGGCCACTCGGTGTTCGAA.... 28 3 1 1.00 1 0 0 0 1 0 0
.......CCCTCCTCCCTACGGTGAGTTAATGT.......................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................TGGGCCACTCGGTGTTCGAAT... 21 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................CGGTGGTGGGCCACTCGGTGTTCGCAT... 27 1 1 1.00 1 1 0 0 0 0 0
.................................................AACTTCTTGAACCCTTCAAAAACCTATTT............................................................................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
...............................ATAATGGCTACTCCTTCAAACTTCTTG................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................GGTGGTGGGCCACTCGGTGTT........ 21 0 1 1.00 1 1 0 0 0 0 0
....................................GGCTACTCCTTCAAACTTCTTGAACCCT........................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................GGTTTAAGAAAAAAGGTATTTCAGCAA............................................. 27 0 5 1.00 5 2 3 0 0 0 0
..........................................................AACCCTTCAAAAACCTATGTCTCGTT....................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.....................................................TCTTGAACCCTTCAAAAACCTATTT............................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
....................GGTGAGTTAATATAATGGCTACT................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................GTGGGCCACTCGGTGTTCGAAT... 22 0 1 1.00 1 1 0 0 0 0 0
..........TCCTCCCTACGGTGAGTTAATA........................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...........................................CCTTCAAACTTCTTGAACCCTTCAAAAA.................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..............................................................................CTCGTTACTTACATATATATCATTCAGT................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
.....................................................CCTTGAACCCTTCAAAAACCTTTGT............................................................................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
........................................................CGAACCCTTCAAAAACCTATGTTTCG......................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0
....TCTCCCTCCTCCCTACGGTGAGTTAAT............................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
.........................GTTAATATAATGGCTACTCCTTCAAA........................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0
......................................................CTTGAACCCTTCAAAAACCTATTT............................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..............CCCTACGGTGAGTTAATATA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..............CCCTACGGTTAGTTAATATAATGGCT................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
......................................................CTTGAACCCTTCAAAAACCTATGTCTCGT........................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0
...CTCTCCCTCCTCCCTACGGTGAGTT............................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.................................AATGGCTACTCCTTCAAACTTCTTGAA............................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
..............CCCTACGGTGAGTTAATATAATGGGT................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
....CCTCCCTCCTCCCTCCGGTGAGTTAAT............................................................................................................................................................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0
..............CCCTACGGTGAGTTAATATAAT....................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
....................................GGCTACTCCTTCAAACTTCT................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................TGGTGGGCCACTCGGTGTTCGAAT... 24 0 1 1.00 1 0 0 0 0 1 0
..........................................................................ATGTCTCGTTACTTACATATATATCAT...................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
............CTCCCTACGGTGAGTTAATATAATGGCT................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................GGTGGGCCACTCGGTGTTCGAATAG. 25 0 1 1.00 1 0 1 0 0 0 0
..............................................................................CTCGTTACTTACATATATATCATTCAT.................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
...........CCTCCCTACGGTGAGTTAATATAATGGCT................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
................CTACGGTGAGTTAATATAATGGCTAC................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................ATCAAATGTATCAATAAATAATGTAAT............................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
.........................................................GAACCCTTCAAAAACCTATGTCTCGT........................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................GGTGGGCCACTGGGTGTTCG...... 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................GGCCACTCGGTCTTCGAATA.. 20 1 1 1.00 1 0 1 0 0 0 0
..............................................TCAAACTTCTTGAACCCTTCAAAAAC................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
................................AAATGGCTACTCCTTCAAACTTCTTGA................................................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................GGCGGTGGTGGGCCACTCGGTGTTCGA..... 27 0 1 1.00 1 1 0 0 0 0 0
................CTACGGTGAGTTAATATAAAGGCTACT................................................................................................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0
...............................ATAATGGCTACTCCTTCAAACTTCTT.................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
........CCTCCTCCCTACGGTGAGTTAATATA......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...................................................CTTCTTGAACCCTTCAAAAACCTAAGT............................................................................................................................................................................. 27 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................................CAATCAATAATCAAATGTATCAATAAAT.................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.......CCCTCCTCCCTACGGTGAGTTAATAT.......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
....................................................TTCTTGAACCCTTCAAAAACCTATTT............................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
.......................................................TTGAACCCTTCAAAAACCTATGTCTC.......................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
....................................GGCTACTCCTTCAAACTTCTTGAACCCTT.......................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
....................................................TTCTTGAACCCTTCAAAAACCTATTC............................................................................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................GGTGGTGGGCCACTCGGTGTTCGAAT... 26 0 1 1.00 1 1 0 0 0 0 0
...............CCTACGGTGAGTTAATATAATGGCTA.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
................................................................TCAAAAACCTATGTCTCGTTACTTAC................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................CACGCGTCGGCGGTGGTGGGCCACT............... 25 0 1 1.00 1 0 1 0 0 0 0
.............................ATATAATGGCTACTCCTTCAAACTTCT................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
......................................CTACTCCTTCAAACTTCTTGAACCCT........................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
....................................................TTCTTGAACCCTTCAAAAACCTTTGT............................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GCGTCGGCGGTGGTGGGCCACTCGGT........... 26 0 1 1.00 1 0 1 0 0 0 0
.....................................................CCTTGAACCCTTCAAAAACCTATTT............................................................................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
......................................................CTTGAACCCTTCAAAAACCTATGT............................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................GGTGGTGGGCCACTCGGTGTTCGAATAG. 28 0 1 1.00 1 0 0 0 0 1 0
...............................................................................CCGTTACTTACATATATATCATTCATT................................................................................................................................................. 27 1 2 1.00 2 2 0 0 0 0 0
.....................................................TGTTGAACCCTTCAAAAACCTATGT............................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0
.............................................................................TCTCGTTACTTACATATATATCATTCATT................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................CGGTGGTGGGCCACTCGGTTT......... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................CCTTCAAAAACCTATGTCTCGTTACT.................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
...............CCTACGGTGAGTTAATATAATGGCTACT................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
................CTACGGTGAGTTAATATAATGGCTA.................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................GTGGGCCACTCGGTGTTCGAATAGG 25 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................TTCAATCAATAATCAAATGTATCAATAA...................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................TAATCAAATGTATCAATAAATAATTT............................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................GCGGTGGTGGGCCACTCGTTGT......... 22 1 1 1.00 1 0 0 0 1 0 0
.................CACGGTGAGTTAATATAATGGCTACT................................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
.....................................................TCTTGAACCCTTCAAAAACCTACGT............................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
....................................................TTCTTGAACCCTTCAAGAACCTTTGT............................................................................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CAGTGGTGGGCCACTCGGTCTTCGAATAG. 29 2 1 1.00 1 1 0 0 0 0 0
..................................................ACTTCTTGAACCCTTCAAAAACCTACGT............................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................GGTGGTGGGCCACTCGGTGTTC....... 22 0 1 1.00 1 0 1 0 0 0 0
...................CGGTGAGTTAATATAATGGCTACG................................................................................................................................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0
................................................................................................ATCATTCATTTCAATCAATAATCAAAT................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................TTAAGAAAAAAGGTATTTCAG................................................ 21 0 6 0.83 5 5 0 0 0 0 0
................................................................................................................................................................................TAAGGTTTAAGAAAAAAGGTATTTCAG................................................ 27 0 5 0.80 4 2 0 2 0 0 0
...............................................................................................................................................................................ATAAGGTTTAAGAAAAAAGGTATT.................................................... 24 0 5 0.80 4 4 0 0 0 0 0
.......................................................................................................................................................................................................GCAGCTAATTGCAACGCG.................................. 18 3 20 0.80 16 16 0 0 0 0 0
.......................................................................................................................................................................................................TCAGCAAATTGCCACGCGT................................. 19 0 4 0.75 3 3 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGGTAT..................................................... 25 0 5 0.60 3 1 1 1 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGTATGT................................................... 26 1 5 0.60 3 3 0 0 0 0 0
................................................................................CTTTACTTACATATATATCATTCAGT................................................................................................................................................. 26 2 2 0.50 1 1 0 0 0 0 0
..................................................................................TTACTTACATATATATCATTGATTTCAAT............................................................................................................................................ 29 1 2 0.50 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................CGCCGGCGGTGGTGGGCCACT............... 21 1 2 0.50 1 0 0 0 1 0 0
...............................................................................TCGTTACTTACATATATATCAT...................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCGTTACTTACATATATATCTTTCATGT................................................................................................................................................ 28 2 2 0.50 1 1 0 0 0 0 0
...............................................................................CCGTTACTTACATATATATCATTCAT.................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TCGTTACTTACATATATATCATT..................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCGTTACTTACATATATATGATTCAT.................................................................................................................................................. 26 1 2 0.50 1 0 0 0 1 0 0
...............................................................................TCGTTACTTACATATATATCATTCGT.................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0 0 0
...............................................................................CCGTTACTTACATATATATCAATCATT................................................................................................................................................. 27 2 2 0.50 1 1 0 0 0 0 0
...............................................................................TCCTTACTTACATATACATCATTCAT.................................................................................................................................................. 26 2 2 0.50 1 0 0 0 1 0 0
...............................................................................TCGTTACTTACATATATA.......................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCTTTACTTCCATATATATCATTCATT................................................................................................................................................. 27 2 2 0.50 1 0 0 0 1 0 0
...............................................................................TCGTTACTTACATATATATCATTCATTTC............................................................................................................................................... 29 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................................................AGGTTTAAGAAAAAAGGTATTTCAGCAA............................................. 28 0 5 0.40 2 1 1 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGGTAGT.................................................... 26 1 5 0.40 2 2 0 0 0 0 0
..............................................................................................................................................................................TATAAGTTTTAAGAAAAAAGGTATT.................................................... 25 1 5 0.40 2 0 0 1 0 1 0
......................................................................................TTACATATATATCATTCATTTCAAT............................................................................................................................................ 25 0 5 0.40 2 1 1 0 0 0 0
...............................................................................................................................................................................ATAAGGTTTAAGAAAAAAGGTATTTCAG................................................ 28 0 5 0.40 2 2 0 0 0 0 0
..............................................................................................................................................................................CATAAGGTTTAAGAAAAAAGGTATT.................................................... 25 1 5 0.40 2 2 0 0 0 0 0
......................................................................................................................................................................................TTAAGAAAAAAGGTATTT................................................... 18 0 6 0.33 2 2 0 0 0 0 0
.......................................................................................................................................................................................................TCAGCAAATTGCCACGAAT................................. 19 2 4 0.25 1 1 0 0 0 0 0
.......................................................................................................................................................................................................TCAGCAAATTGCCACGCGGGGGTGGT.......................... 26 3 4 0.25 1 1 0 0 0 0 0
................................................................................................................................................................................................AGGTATTTCAGCAAATTGCCACGCGTC................................ 27 0 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................................................................................ATTTCAGCAAATTGCCACGCGT................................. 22 0 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................................................................................AAAAAAGGTATTTCAGCAAATTGCCAC..................................... 27 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................................AAGGTATTTCAGCAAATTGCCACGAGT................................. 27 1 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................................................GGTATTTCGGCAAATTGCCACGCGT................................. 25 1 4 0.25 1 0 1 0 0 0 0
......................................................................................................................................................................................................ATCAGCAAATTGCCACGCGTCG............................... 22 1 4 0.25 1 0 0 1 0 0 0
..............................................................................................................................................................................................AAAGGTATTTCAGCAAATTGCCACGCTT................................. 28 1 4 0.25 1 1 0 0 0 0 0
.........................................................................................................................................................................................................AGCAAATTGCCACGCGTCG............................... 19 0 4 0.25 1 0 0 0 1 0 0
......................................................................................................................................................................................................TTCAGCAAATTGCCACGCGT................................. 20 0 4 0.25 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GCAGCTAATTGCAACGCGT................................. 19 3 17 0.24 4 4 0 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGTAA..................................................... 24 1 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGTTATTT................................................... 27 1 5 0.20 1 1 0 0 0 0 0
............................................................................................ATATATCATTCATTTCAATCAAT........................................................................................................................................ 23 0 5 0.20 1 0 1 0 0 0 0
................................................................................................................................................................................TAAGGTTTAAGAAAAAAGGTATTT................................................... 24 0 5 0.20 1 0 0 1 0 0 0
...............................................................................................................................................................................ATAAGGTTTAAGAAAAAAGGTA...................................................... 22 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAG......................................................... 21 0 5 0.20 1 0 1 0 0 0 0
...........................................................................................................................................................................AATTATAAGGTTTAAGAAAAAAGGTA...................................................... 26 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................CTATAAGGTTTAAGAAAAAAGGTATTT................................................... 27 1 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................ATATAAGGTTTAAGACAAAAGGTATT.................................................... 26 2 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................................................GGTTTAAGAAAAAAGGTATTTCAGCAAA............................................ 28 0 5 0.20 1 0 1 0 0 0 0
...............................................................................................TATCATTCATTTCAACCAATA....................................................................................................................................... 21 1 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................................................ATAAGGTTTAAGAAAAAAGGTAGT.................................................... 24 1 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAACAAAAAAGGTATT.................................................... 26 1 5 0.20 1 0 0 0 1 0 0
.............................................................................................................................................................................TTATAAGGTTTACGAAAACGGGTATT.................................................... 26 3 5 0.20 1 0 0 0 1 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAATAAGGTATT.................................................... 26 1 5 0.20 1 0 1 0 0 0 0
....................................................................................................................................................................................GTTTAAGAAAAAAGGTATTTCAGCAA............................................. 26 0 5 0.20 1 0 1 0 0 0 0
.............................................................................................................................................................................TAATAAGGTTTAAGAAAAAAGGTAT..................................................... 25 1 5 0.20 1 0 1 0 0 0 0
.................................................................................................................................................................................AAGGTTTAAGAAAAAAGGTATT.................................................... 22 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAACAGGTAGT.................................................... 26 2 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................................................TATAAGGTTGAAGAAAAAAGGTAGT.................................................... 25 2 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................................................ATAAGGTTTAAGAAAAAAGGTATTT................................................... 25 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................................................TTAAGGTTTAAGAAAAAAGGTATTTCAG................................................ 28 1 5 0.20 1 1 0 0 0 0 0
......................................................................................TTACATATATATCATTCATTTCAATCAAT........................................................................................................................................ 29 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................................................ATAATGTTTAAGAAAAAAGGTATGT................................................... 25 2 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................................AGGTTTAAGAATAAAGGTATTT................................................... 22 1 5 0.20 1 0 0 1 0 0 0
.............................................................................................................................................................................TTATAAGTTTTAAGAAAAAATGTATT.................................................... 26 2 5 0.20 1 0 0 0 1 0 0
..................................................................................................................................................................................AGGTTTAAGAAAAAAGGTATT.................................................... 21 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................................AGGTTTAAGAAAAACGGTATTTCAG................................................ 25 1 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................................................TATATGGTTTAAGAAAAAAGGTATT.................................................... 25 1 5 0.20 1 0 0 1 0 0 0
..................................................................................................................................................................................CGGTTTAAGAAAAAAGGTATT.................................................... 21 1 5 0.20 1 0 0 1 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAATAAAAAAGGTATT.................................................... 26 1 5 0.20 1 0 0 0 1 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGCATT.................................................... 25 1 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTACGAAAAAAGGTATT.................................................... 25 1 5 0.20 1 0 0 1 0 0 0
...........................................................................................TATATATCATTCATTTCAATCAAT........................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTCTAAGGTTTAAGAAAAAAGGTATT.................................................... 26 1 5 0.20 1 0 0 1 0 0 0
.............................................................................................................................................................................TTATAATATTTAAGAAAAAACGTATT.................................................... 26 3 5 0.20 1 0 0 0 1 0 0
...............................................................................................................................................................................TTAAGGTTTAAGAAAAAAGGTATT.................................................... 24 1 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAAAAACAAGGTATT.................................................... 25 2 5 0.20 1 0 1 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAACAGGTATT.................................................... 25 1 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGGCATT.................................................... 26 1 5 0.20 1 0 0 1 0 0 0
.............................................................................................................................................................................TTATAAGGTTAAAGAAAAAAGGTATT.................................................... 26 1 5 0.20 1 0 0 1 0 0 0
...............................................................................................................................................................................TTAGGGTTTAAGAAAAAAGGTATT.................................................... 24 2 5 0.20 1 0 0 1 0 0 0
......................................................................................TTACATATATATCATTCATT................................................................................................................................................. 20 0 5 0.20 1 0 1 0 0 0 0
..................................................................................................................................................................................AGGTTTAAGAAAAAAGGTGTTTCAGCA.............................................. 27 1 5 0.20 1 0 1 0 0 0 0
..............................................................................................................................................................................CATAAGGTTTAAGAAAAAAGTTATTT................................................... 26 2 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................AAGGTTTAAGAAAAAAGGTATTTCAC................................................ 26 1 5 0.20 1 0 0 0 1 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAG......................................................... 20 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAATGTATT.................................................... 26 1 5 0.20 1 0 0 0 1 0 0
...................................................................................................................................................................................GGTTTAAGAAAAAAGGTATTTCAGC............................................... 25 0 5 0.20 1 0 1 0 0 0 0
.............................................................................................................................................................................TTATAGGGTTTAAGAAAAAAGGTATT.................................................... 26 1 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................................................TATAAGGTTTAGGAAAAAAGGTATT.................................................... 25 1 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................................................TATCAGGTTTAAGAAAACAGGTATT.................................................... 25 2 5 0.20 1 1 0 0 0 0 0
......................................................................................................................................................................................TTAAGAAAAAAGGTATTTCAGCAAA............................................ 25 0 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAAAAAAGGAATT.................................................... 25 1 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................................AGGTTTATGAAAAAAGGTATTTCAG................................................ 25 1 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGACAAAAGGTATT.................................................... 25 1 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................................................TATAAGGTTTAAGAATAAAGGTATTT................................................... 26 1 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................................................CATAAGGTTTAAGAAAAAAGGTATTT................................................... 26 1 5 0.20 1 1 0 0 0 0 0
........................................................................................ACATATATATCATTCATTTCAATCAA......................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAGGGATT.................................................... 26 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................AAGGTTTAAGAAAAAAGGTATTCCAG................................................ 26 1 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................................................AAAGGTTTAAGAAAAAAGGTATTTCAG................................................ 27 1 6 0.17 1 1 0 0 0 0 0
.............................................................................................................................................................................TTATAAGGTTTAAGAAAAAAAATAT..................................................... 25 2 6 0.17 1 1 0 0 0 0 0
.....................................................................................................................................................................................TTTAAGAAAAAAGGTATT.................................................... 18 0 6 0.17 1 0 0 0 1 0 0
........................................................................................................................................................................................................CAGCTAATTGCAACGCGT................................. 18 2 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GCAGCTAATTGCAACGCGTC................................ 20 3 8 0.13 1 1 0 0 0 0 0
...............................................................................................................................................................................................AAGGCAGTTCAGCAAATT.......................................... 18 2 10 0.10 1 0 0 0 0 0 1
.................................................................................................................................................................................................................................AGTGGGCCAATCGGTGTTA....... 19 3 11 0.09 1 0 0 1 0 0 0
.......................................................................................................................................................................................................CCAGCTAATTGCAACGCG.................................. 18 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:959518-959768 + dan_898 AGGAAGAGGGAGGAGGGATGCCACTCAATTATATTACCGATGAGGAAGTTTGAAGAACTTGGGAAGTTTTTGGATACAGAGCAATGAATGTATATATAGTAAGTAAAGTTAGTTATTAGTTTACATAGTTATTTATTA---------------CATT---------------------------AGTATATTATATTAGTTTTTCTATTTCTATTAATATTCCAAATTCTTTTTTCCATAAAGTCGTTTAACGGTGCGCAGCCGCCACCACCCGGTGAGCCACAAGCTTATCC
droKik1 scf7180000299257:645-731 - TT------------------------------------------------------------------------------------------------------------AT---------------TTATTTATTTATTTATTTATTTATTTTATTTATTTATTTATTTATTTTATTTATTTATTTATTTTATTTATTTATTTA-----------------------------------------------------------------------------------TTTAT
droFic1 scf7180000454111:106472-106498 + CG------------------------------------------------------------------------------------------------------------AA---------------G-------------------------------------------------------------------------------------------------------------------------------------CCACCGCCTCCGGGTCCG----------CCTC
droRho1 scf7180000771835:7947-7983 + AAATAAAAAGAAAAGGAAAGCAGCTCAATAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAC
droTak1 scf7180000415843:609533-609599 + AA------------------------------------------------------------------------------------------------------------AT----TGTTTATTATTATTATTATTTACATTACTATG----------------------------TTA--------------ATTTATTATTATTATTTTTATTT------------------------------------------------------------------------GTATT
droEug1 scf7180000409271:172965-172996 + CC------------------------------------------------------------------------------------------------------------GG-----------------CA----------------------------------------------------------------------------------------------------------------------------------------CCACCCTGCCAGCCACCAGCTCCTCC
droYak3 3R:26596649-26596695 + TA------------------------------------------------------------------------------------------------------------CA-------------TAGGTAAATATTA---------------CATA---------------------------AGTACAGCATATAGTTTTCTA-----------------------------------------------------------------------------------TATTT
dp5 XL_group1a:8665871-8665907 + CG------------------------------------------------------------------------------------------------------------CA---------------C-------------------------------------------------------------------------------------------------------------------------------------CTGCCGCCGCCGGAACCGCCGCAACCACCGCC
droVir3 scaffold_12928:7447531-7447584 + TT------------------------------------------------------------------------------------------------------------TT---------------GC----------------------------------------------------------------------------TGTTTAGTTTAATATTAAAAATTGTTATATTTATAAATTTATT----------------------------------------TAATG
droMoj3 scaffold_6496:2157615-2157643 + CC------------------------------------------------------------------------------------------------------------AG-----------------CA-------------------------------------------------------------------------------------------------------------------------------------------CCTCCAGCGCCACCAGCTCCACC
droGri2 scaffold_14853:495026-495080 - GT------------------------------------------------------------------------------------------------------------CC---------------GCCGCCGCCAGAGTGACCACC----------------------------CTG--------------ATGTTCGACAACTTTGA-------------------------------------------------------------------------CAACTTGTAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGGAAGAGGGAGGAGGGATGCCACTCAATTATATTACCGATGAGGAAGTTTGAAGAACTTGGGAAGTTTTTGGATACAGAGCAATGAATGTATATATAGTAAGTAAAGTTAGTTATTAGTTTACATAGTTATTTATTA---------------CATT---------------------------AGTATATTATATTAGTTTTTCTATTTCTATTAATATTCCAAATTCTTTTTTCCATAAAGTCGTTTAACGGTGCGCAGCCGCCACCACCCGGTGAGCCACAAGCTTATCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGC....................................2648.003281311000
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGT......................................2445.00201170020
.........................................................................................................................................................................................................................................................................CACCACCCGGTGAGCCACAAGCTTATC.2714.004040000
....................................................................TTTGGATACAGAGCAATGAATGT..........................................................................................................................................................................................................2313.003000030
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGCGC..................................2843.0012453000
..................TGCCACTCAATTATATTACCGATGAG.........................................................................................................................................................................................................................................................2613.003030000
................................................................................................................................................................................................................................................AAGTCGTTTAACGGTGCGCAGCCGCC...........................2613.003030000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGC..................................2442.7511143030
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGCG...................................2742.5010820000
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTG.....................................2542.259502020
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGC....................................2542.259152010
..............................................................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGC...............................2442.259090000
...................................................................TTTTGGATACAGAGCAATGAAT............................................................................................................................................................................................................2212.002002000
................................ATTACCGATGAGGAAGTTTGAAGAACT..........................................................................................................................................................................................................................................2712.002020000
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGG.......................................2342.008215000
..................................................................TTTTTGGATACAGAGCAATGAAT............................................................................................................................................................................................................2312.002001010
..............................................................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGCCG.............................2612.002200000
..................................................................TTTTTGGATACAGAGCAATGAATGTA.........................................................................................................................................................................................................2612.002000020
....................................................................TTTGGATACAGAGCAATGAATGTAT........................................................................................................................................................................................................2512.002001010
..................................................................................................................................................................................................................................................................CAGCCGCCACCACCCGGTGAG..............2112.002200000
.....................................CGATGAGGAAGTTTGAAGAACTT.........................................................................................................................................................................................................................................2312.002002000
..................................................................TTTTTGGATACAGAGCAATGAATGT..........................................................................................................................................................................................................2512.002002000
.........................................................................................................................................................................................................................................................................CACCACCCGGTGAGCCACAAGCTTATCC2812.002200000
..............................................................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGCC..............................2541.757060010
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGTGCGCA.................................2941.255500000
..........................................................................TACAGAGCAATGAATGTATATATAGT.................................................................................................................................................................................................2611.001010000
............................................GAAGTTTGAAGAACTTGGGAAGT..................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................CGCCACCACCCGGTGAGCCACAAGCTT....2711.001010000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCAGC...............................2741.004130000
..................................................................TTTTTGGATACAGAGCAATGAA.............................................................................................................................................................................................................2211.001000010
..................TGCCACTCAATTATATTACCGATGAGG........................................................................................................................................................................................................................................................2711.001100000
.....................................CGATGAGGAAGTTTGAAGAACTTGG.......................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................CACCCGGTGAGCCACAAGCTTATC.2411.001010000
..........................................................................................................................................................................................................................................................................ACCACCCGGTGAGCCACAAGCTTATCC2711.001100000
......................................................................TGGATACAGAGCAATGAATG...........................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................ACCACCCGGTGAGCCACAAGCTTATC.2611.001010000
....................................................................................................................................................................................................................................................................GCCGCCACCACCCGGTGAGCCACAAG.......2611.001010000
.................ATGCCACTCAATTATATTACCGATGAG.........................................................................................................................................................................................................................................................2711.001100000
.................................................................GTTTTTGGATACAGAGCAATGAATGT..........................................................................................................................................................................................................2611.001010000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGCGCA.................................2841.004400000
................................ATTACCGATGAGGAAGTTTGAAGA.............................................................................................................................................................................................................................................2411.001010000
..............................................................GAAGTTTTTGGATACAGAGCAATGAATG...........................................................................................................................................................................................................2811.001000010
................................ATTACCGATGAGGAAGTTTGAAG..............................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................................................................................................................................TCGTTTAACGGTGCGCAGCCGCCA..........................2411.001100000
............................................................................................................................................................................................................................................................................CACCCGGTGAGCCACAAGCTTATCC2511.001001000
...............................................................................................................................................................................................................................................AAAGTCGTTTAACGGTGCGCAGCCGC............................2611.001100000
............GAGGGATGCCACTCAATTATATTACCGAT............................................................................................................................................................................................................................................................2911.001010000
.................................TTACCGATGAGGAAGTTTGAAGAA............................................................................................................................................................................................................................................2411.001010000
..................................................TGAAGAACTTGGGAAGTT.................................................................................................................................................................................................................................1811.001010000
....AGAGGGAGGAGGGATGCCACTCA..........................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................GCCACCACCCGGTGAGCCACAAGCTTA...2711.001100000
....................................................................TTTGGATACAGAGCAATGAAT............................................................................................................................................................................................................2111.001010000
......................................................................TGGATACAGAGCAATGAATGT..........................................................................................................................................................................................................2111.001000010
..........................................................................TACAGAGCAATGAATGTATATATAGC.................................................................................................................................................................................................2611.001010000
.....GAGGGAGGAGGGATGCCACTCAATTA......................................................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGCGC..................................2740.753120000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCAG................................2640.753300000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGC....................................2240.753101010
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGG.......................................2240.753111000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGCG...................................2640.753300000
...............................................................................................................................................................................................................................................AAAGTCGTTTAACGGTGCGCAGC...............................2340.753201000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCA.................................2540.753111000
...........................................................................................ATATATAGTAAGTAAAGTTAGTT...................................................................................................................................................................................2350.603030000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCG...................................2340.502010010
..............................................................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCA.................................2240.502101000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGT......................................2340.502110000
..........................................................................................................................................................................................................................................TCCATAAAGTCGTTTAACGGTGCGC..................................2540.502020000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGT..................................2440.502100010
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGCAGCC..............................2840.502200000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTG.....................................2440.502200000
...........................................................................................................................................................................................................................................CCATAAAGTCGTTTAACGGTGCGA..................................2440.251100000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAAC.........................................2040.251010000
........................................................................................................................................................................................................................................TTTCCATAAAGTCGTTTAACGGTGTA...................................2640.251010000
..........................................................................................................................................................................................................................................TCCATAAAGTCGTTTAACGGTGCGCA.................................2640.251100000
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACG........................................2240.251100000
.............................................................................................................................................................................................................................................ATAAAGTCGTTTAACGGTGCGCAG................................2440.251100000
..............................................................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAGCT..............................2540.251100000
.......................................................................................................................................................................................................................................TTTTCCATAAAGTCGTTTAACGGC......................................2440.251010000
.....................................................................................................................................................................................................................................TTTTTTCCATAAAGTCGTTTAACGGC......................................2640.251010000
..............................................................................................................................................................................................................................................TAAAGTCGTTTAACGGTGCGCAG................................2340.251100000
......................................................................................................................................................................................................................................TTTTTCCATAAAGTCGTTTAACGGTG.....................................2640.251100000
.........................................................................................................................................................................................................................................TTCCATAAAGTCGTTTAACGGTG.....................................2340.251100000
............................................................................................................................................................................................................CTATTTCTATTAATATTCCAAATTCTT..............................................................2750.201100000
...................................................................................................................................................................................................................TATTAATATTCCAAATTCTTTTTT..........................................................2450.201010000
...........................................................................................................................................................................................................TCTATTTCTATTAATATTCCAAATT.................................................................2550.201010000
..............................................................................................................................................................................................................ATTTCTATTAATATTCCAAATTCTT..............................................................2550.201010000
...........................................................................................ATATATAGTAAGTAAAGTTAGTTAT.................................................................................................................................................................................2550.201010000
...............................................................................................................................................................................................................TTTCTATTAATATTCCAAATTCTTTT............................................................2650.201010000
...........................................................................................................................................................................................................TCTATTTCTATTAATATTCCAAATTC................................................................2650.201010000
........................................................................................TGTATATATAGTAAGTAAAGTTAGTT...................................................................................................................................................................................2650.201010000
...........................................................................................................................................................................................................TCTATTTCTATTAATATTCCAAAT..................................................................2450.201010000
droKik1
TT------------------------------------------------------------------------------------------------------------AT---------------TTATTTATTTATTTATTTATTTATTTTATTTATTTATTTATTTATTTTATTTATTTATTTATTTTATTTATTTATTTA-----------------------------------------------------------------------------------TTTATSizeHit CountTotal NormTotal
No Reads
droFic1
CG------------------------------------------------------------------------------------------------------------AA---------------G-------------------------------------------------------------------------------------------------------------------------------------CCACCGCCTCCGGGTCCG----------CCTCSizeHit CountTotal NormTotal
No Reads
droRho1
AAATAAAAAGAAAAGGAAAGCAGCTCAATAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACSizeHit CountTotal NormTotal
No Reads
droTak1
AA------------------------------------------------------------------------------------------------------------AT----TGTTTATTATTATTATTATTTACATTACTATG----------------------------TTA--------------ATTTATTATTATTATTTTTATTT------------------------------------------------------------------------GTATTSizeHit CountTotal NormTotal
No Reads
droEug1
CC------------------------------------------------------------------------------------------------------------GG-----------------CA----------------------------------------------------------------------------------------------------------------------------------------CCACCCTGCCAGCCACCAGCTCCTCCSizeHit CountTotal NormTotal
No Reads
droYak3
TA------------------------------------------------------------------------------------------------------------CA-------------TAGGTAAATATTA---------------CATA---------------------------AGTACAGCATATAGTTTTCTA-----------------------------------------------------------------------------------TATTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
dp5
CG------------------------------------------------------------------------------------------------------------CA---------------C-------------------------------------------------------------------------------------------------------------------------------------CTGCCGCCGCCGGAACCGCCGCAACCACCGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droVir3
TT------------------------------------------------------------------------------------------------------------TT---------------GC----------------------------------------------------------------------------TGTTTAGTTTAATATTAAAAATTGTTATATTTATAAATTTATT----------------------------------------TAATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CC------------------------------------------------------------------------------------------------------------AG-----------------CA-------------------------------------------------------------------------------------------------------------------------------------------CCTCCAGCGCCACCAGCTCCACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GT------------------------------------------------------------------------------------------------------------CC---------------GCCGCCGCCAGAGTGACCACC----------------------------CTG--------------ATGTTCGACAACTTTGA-------------------------------------------------------------------------CAACTTGTACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:34 PM