ID:dan_892 |
Coordinate:scaffold_12943:952668-952818 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in alignment | mismatch in read |
![]() |
![]() |
![]() |
![]() |
![]() |
| -39.5 | -39.2 | -38.9 |
![]() |
![]() |
![]() |
CDS [Dana\GF21951-cds]; exon [dana_GLEANR_595:3]; intron [Dana\GF21951-in]
No Repeatable elements found
| mature | star |
| ##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- TTTGGAGAACCATCTGAAGGTGTGCCTGACACAGGCAAAGACAGATGCATGTTTGTGTGACCAACAATTTTTGGTGGTCATTTTTGAACCATACATTTTATGGTCTCATTTTCTCAACTGCGACCTCAAAAGCCTGGTCACACTGCGAAATATTGTGCCAAATGCGCGAGCGCCATCTAGGGGTGACGAATGAAAATGTTACGTTCGGCACACTAATTTCACAGTGGGACCAAAATGCCAAAACTAAGCAA **************************************************((..(((((((((....(((((((.((((....((((((((((.....)))))).........))))....)))))))))))..))))))))).))......((((((.....))))))((.((.....)).)).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M044 female body |
M058 embryo |
V039 embryo |
V105 male body |
V106 head |
V055 head |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ......GAACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 0 | 4 | 30.50 | 122 | 61 | 59 | 1 | 1 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 24 | 0 | 4 | 13.50 | 54 | 27 | 26 | 1 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTG............................................................................................................................................................................................................................... | 22 | 0 | 4 | 11.50 | 46 | 39 | 1 | 1 | 5 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGACA............................................................................................................................................................................................................................ | 25 | 0 | 4 | 7.75 | 31 | 30 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGACACA.......................................................................................................................................................................................................................... | 27 | 0 | 4 | 5.00 | 20 | 17 | 3 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCT................................................................................................................................................................................................................................ | 21 | 0 | 4 | 4.50 | 18 | 4 | 13 | 1 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGACAC........................................................................................................................................................................................................................... | 26 | 0 | 4 | 4.50 | 18 | 11 | 5 | 0 | 0 | 2 | 0 |
| ......GAACCATCTGAAGGTGTGCCC................................................................................................................................................................................................................................ | 21 | 1 | 4 | 2.00 | 8 | 0 | 8 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCC................................................................................................................................................................................................................................. | 20 | 0 | 4 | 2.00 | 8 | 1 | 6 | 0 | 1 | 0 | 0 |
| ............TCTGAAGGTGTGCCTGACACAGG........................................................................................................................................................................................................................ | 23 | 0 | 4 | 1.25 | 5 | 2 | 2 | 1 | 0 | 0 | 0 |
| TTTGGAGAACCATCTGAAGGTGTGC.................................................................................................................................................................................................................................. | 25 | 0 | 4 | 1.25 | 5 | 1 | 2 | 1 | 1 | 0 | 0 |
| .......................................GACAGATGCATGTTTGTGTGACCA............................................................................................................................................................................................ | 24 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .TTGGAGAACCATCTGAAGGTGTGC.................................................................................................................................................................................................................................. | 24 | 0 | 4 | 1.00 | 4 | 1 | 3 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGACACAG......................................................................................................................................................................................................................... | 28 | 0 | 4 | 1.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| .......AACCATCTGAAGGTGTGCCTGACA............................................................................................................................................................................................................................ | 24 | 0 | 4 | 1.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 |
| ........ACCATCTGAAGGTGTGCCTGACACAG......................................................................................................................................................................................................................... | 26 | 0 | 4 | 0.75 | 3 | 0 | 2 | 1 | 0 | 0 | 0 |
| ......GAACCATCGGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.75 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| TTTGGAGAACCATCTGAAGGTGTGCC................................................................................................................................................................................................................................. | 26 | 0 | 4 | 0.75 | 3 | 0 | 3 | 0 | 0 | 0 | 0 |
| ....GAGAACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 25 | 0 | 4 | 0.75 | 3 | 1 | 2 | 0 | 0 | 0 | 0 |
| ......GAACCATCGGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 24 | 1 | 4 | 0.75 | 3 | 3 | 0 | 0 | 0 | 0 | 0 |
| .......AACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 22 | 0 | 4 | 0.75 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................CATTTTCTCAACTGCGACCTCAAAAGCC..................................................................................................................... | 28 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TTCTCAACTGCGACCTCAAAAGCCTGG.................................................................................................................. | 27 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......AACCATCTGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 23 | 0 | 4 | 0.50 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................TCATTTTCTCAACTGCGACCTCA........................................................................................................................... | 23 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................TTTTCTCAACTGCGACCTCAAAAGCCTG................................................................................................................... | 28 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCAGAAGGTGTGCCTG............................................................................................................................................................................................................................... | 22 | 1 | 4 | 0.50 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TTCTCAACTGCGACCTCAAAAGCCTGGT................................................................................................................. | 28 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GGACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.50 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| .TTGGAGAACCATCTGAAGGTGTGCC................................................................................................................................................................................................................................. | 25 | 0 | 4 | 0.50 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................TTCTCAACTGCGACCTCAAAAGCCTG................................................................................................................... | 26 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............GAAGGTGTGCCTGACACAGGCAAAGA.................................................................................................................................................................................................................. | 26 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTATGCCT................................................................................................................................................................................................................................ | 21 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCAGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGGGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTCTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............TCTGAAGGAGTGCCTGACACAGGC....................................................................................................................................................................................................................... | 24 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCATGAT............................................................................................................................................................................................................................. | 24 | 2 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .............CTGAAGGTGTGCCTGACACAGGCT...................................................................................................................................................................................................................... | 24 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....AGAACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 24 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGTTG............................................................................................................................................................................................................................ | 25 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTTTGCCTGACA............................................................................................................................................................................................................................ | 25 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........CATCTGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 20 | 0 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........ACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 21 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCACCGGAAGGTGTGCCTGACA............................................................................................................................................................................................................................ | 25 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAACGTGTGCCTGAC............................................................................................................................................................................................................................. | 24 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACAATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAATCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GACCCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGAGCC................................................................................................................................................................................................................................. | 20 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGATG............................................................................................................................................................................................................................ | 25 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| TTTGGAGAACCATCTGAAGGTGTGCCT................................................................................................................................................................................................................................ | 27 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCGGAAGGTGTGCCTG............................................................................................................................................................................................................................... | 22 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGACGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........ACCATCTGAAGGTGTGCCTGACACAGG........................................................................................................................................................................................................................ | 27 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .TTGGAGAACCCTCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 28 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....AGAACCATCTGAAGGTGTGCCTGACA............................................................................................................................................................................................................................ | 26 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......AAACCATCTGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 24 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| TTTGGAGAACCATCTGAAGGTGTTC.................................................................................................................................................................................................................................. | 25 | 1 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTGCCTGAAA............................................................................................................................................................................................................................ | 25 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......AACCATCTGAAGGTGTGCCTGACACA.......................................................................................................................................................................................................................... | 26 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGCAGGTGTGCCTG............................................................................................................................................................................................................................... | 22 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGAGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| TGTGGAGAACCATCTGAAGGTGTGC.................................................................................................................................................................................................................................. | 25 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAACCATCAGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 24 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCCGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 24 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....GAGAACCATCTGAAGGTGTGCCT................................................................................................................................................................................................................................ | 23 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GAATCATCTGAAGGTGTGCCT................................................................................................................................................................................................................................ | 21 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............TGAAGGTGTGCCAGACACAGGCAAAGA.................................................................................................................................................................................................................. | 27 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....GAGAACCACCTGAAGGTGTGCCTGACA............................................................................................................................................................................................................................ | 27 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGTTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............TCTGAAGGTGTCCCTGACAC........................................................................................................................................................................................................................... | 20 | 1 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .....AGAACCATCTGAAGGTGTGCCTG............................................................................................................................................................................................................................... | 23 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....CTAACCATCTGAAGGTGTGCCTGAC............................................................................................................................................................................................................................. | 25 | 2 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......AACCATCTGAAGGTGTGCCTGACACAG......................................................................................................................................................................................................................... | 27 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....ATAACCATCTGAAGGTGTGCCT................................................................................................................................................................................................................................ | 22 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GGACCATCTGCAGGTGTGCCTG............................................................................................................................................................................................................................... | 22 | 2 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............TGAAGGTGTGCCTGACACAGGCAAAG................................................................................................................................................................................................................... | 26 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........ACCATCTGAAGGTGTGCCTGACACA.......................................................................................................................................................................................................................... | 25 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....GAGAACCATCTGAAGGTGTGCCTGACA............................................................................................................................................................................................................................ | 27 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...GTAGAACCATCTGAAGGTGTGC.................................................................................................................................................................................................................................. | 22 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......GTACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........ATCTGAAGGTGTGCCTGACACAG......................................................................................................................................................................................................................... | 23 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......GAACCATCTGAAGGTGTTCCTGA.............................................................................................................................................................................................................................. | 23 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....GAGTACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 25 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...ATCGAACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 26 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...ATCGAACCATCTGAAGGTGTGCC................................................................................................................................................................................................................................. | 23 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .TTGGAGAACCATCTGAAGGTGTGCCTGA.............................................................................................................................................................................................................................. | 28 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....GAGAACCATCTGAAGGTGTGCCTG............................................................................................................................................................................................................................... | 24 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............TCTGAAGGTGTGCCTGACACAGGC....................................................................................................................................................................................................................... | 24 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................AATCCGGGAGGGCCATCTA........................................................................ | 19 | 3 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ................................................ATGATTGTATGACCAGCAAT....................................................................................................................................................................................... | 20 | 3 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................ATTTTTGTGTGACCACCA......................................................................................................................................................................................... | 18 | 2 | 14 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................................TGTGTGACCGACTGTTTTTG.................................................................................................................................................................................. | 20 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CAATTTTTGGTGGTCATTTTTGC.................................................................................................................................................................... | 23 | 1 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
|
AAACCTCTTGGTAGACTTCCACACGGACTGTGTCCGTTTCTGTCTACGTACAAACACACTGGTTGTTAAAAACCACCAGTAAAAACTTGGTATGTAAAATACCAGAGTAAAAGAGTTGACGCTGGAGTTTTCGGACCAGTGTGACGCTTTATAACACGGTTTACGCGCTCGCGGTAGATCCCCACTGCTTACTTTTACAATGCAAGCCGTGTGATTAAAGTGTCACCCTGGTTTTACGGTTTTGATTCGTT
**************************************************((..(((((((((....(((((((.((((....((((((((((.....)))))).........))))....)))))))))))..))))))))).))......((((((.....))))))((.((.....)).)).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M058 embryo |
M044 female body |
V039 embryo |
V055 head |
|---|---|---|---|---|---|---|---|---|---|
| ....CTCTTGGTAGACTTCCACACGGACT.............................................................................................................................................................................................................................. | 25 | 0 | 4 | 1.25 | 5 | 5 | 0 | 0 | 0 |
| .................................CCGTTTCTGTCTACGTACAAAAAA.................................................................................................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .................................CCGTTTCTGTCTACGTACAAACACA................................................................................................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ......CTTGGTAGACTTCCACACGGACTGT............................................................................................................................................................................................................................ | 25 | 0 | 4 | 0.50 | 2 | 0 | 1 | 1 | 0 |
| ............................................................................................................................................................................................................................TGTTACCCTGGTTATACGGT........... | 20 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 |
| ..........................................................................................................................................................................................GCTTACTTTTACATTCCAA.............................................. | 19 | 2 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 |
| ....CTCTTGGTAGACTTCCACACGGACTG............................................................................................................................................................................................................................. | 26 | 0 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 |
| .....TCTTGGTAGACTTCCACACGGACTGTAG.......................................................................................................................................................................................................................... | 28 | 2 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| ...CCTCTTGGTAGACTTCCACACGGACT.............................................................................................................................................................................................................................. | 26 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| ....CTCTTGGTAGACTTCCACACGGACTGTG........................................................................................................................................................................................................................... | 28 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................................GTCACGATGGTTTTACGGTTCT........ | 22 | 3 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 |
| ........................................................................................................................................................................................................................AACGTGTCACCCTGGGTTT................ | 19 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 |
| ................................................TACTAACATACTGGTCGTTA....................................................................................................................................................................................... | 20 | 3 | 13 | 0.08 | 1 | 0 | 1 | 0 | 0 |
| ........................................................................CCACCAGTAAAACCTTGAAA............................................................................................................................................................... | 20 | 3 | 16 | 0.06 | 1 | 1 | 0 | 0 | 0 |
| Species | Coordinate | ID | Alignment |
|---|---|---|---|
| droAna3 | scaffold_12943:952618-952868 - | dan_892 | TTTGGAGAACCATCTGAAGGTGTGCCTGACACAGGCAAAGACAGATGCATGTTTGTGTGACCAACAATTTTTGGTGGTCATTTTTGAACCATACATTTTATGGTCTCATTTTCTCAACTGCGACCTCAAAAGCCTGGTCACACTGCGAAATATTGTGCCAAATGCGCGAGCGCCATCTAGGGGTGACGAATGAAA-ATGTTACGTTCGGCACACTAATTTCACAGTGGGACCAAAATGCCAAAACTAAGCAA |
| droBip1 | scf7180000396728:2185636-2185711 + | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGCCATCTATGGGTGACGATAGAAAAACATGTCTTTGGGCACACTAATACCACAGTGGGACCAAA--------ACTACATAA | |
| droRho1 | scf7180000771836:2643-2722 + | CTGGGAGAAGGGGCCCTGGGTGTGGCTGTCACCGGGAGAGCTAGCCGCACGGCCGC----CCAACTTCGCTAGGCTGTCGTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| Species | Read alignment | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| droAna3 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| droBip1 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| droRho1 |
|
Generated: 05/17/2015 at 11:34 PM