ID:

dan_871

 Coordinate:

scaffold_12943:225196-225346 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.8 -19.6 -19.5 -19.4

Flybase annnotation

exon [dana_GLEANR_621:2]; CDS [Dana\GF22233-cds]; intron [Dana\GF22233-in]

No Repeatable elements found

mature
  1. scaffold_600:673-700 -
  2. scaffold_865:1243-1270 +
  3. scaffold_4371:437-464 +
  4. scaffold_6181:631-658 +
  5. scaffold_6657:1329-1356 +
  6. scaffold_8309:341-368 +
  7. scaffold_8656:4911-4938 -
  8. scaffold_12905:431429-431456 +
  9. dan_871  scaffold_12943:225278-225305 -
  10. scaffold_12948:595785-595812 +
  11. scaffold_13045:422636-422663 +
  12. scaffold_13184:7624-7651 -
  13. scaffold_13250:859572-859599 -
  14. scaffold_13258:1290942-1290969 +
  15. scaffold_13260:1979668-1979695 +
  16. scaffold_13266:12844035-12844062 +
  17. scaffold_13335:2890254-2890281 -
  18. scaffold_13337:15195392-15195419 +
  19. scaffold_13469:800379-800406 +
  20. scaffold_13770:359512-359539 +
  21. scaffold_9085:5429-5456 -
star
  1. scaffold_600:713-737 -
  2. scaffold_4202:424-448 -
  3. scaffold_4371:400-424 +
  4. scaffold_6181:594-618 +
  5. scaffold_6301:476-500 +
  6. scaffold_6657:1292-1316 +
  7. scaffold_7043:1687-1711 -
  8. scaffold_8292:8040-8064 +
  9. scaffold_8309:304-328 +
  10. scaffold_9085:5469-5493 -
  11. scaffold_9251:4427-4451 +
  12. scaffold_9405:6188-6212 +
  13. dan_871  scaffold_12943:225318-225342 -
  14. scaffold_13034:976368-976392 +
  15. scaffold_13184:7664-7688 -
  16. scaffold_13258:1290905-1290929 +
  17. scaffold_13266:12843998-12844022 +
  18. scaffold_13280:685475-685499 -
  19. scaffold_13469:800342-800366 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGCAGCAAGCACGCAAAGTTTACCAGTTTTTCGCGCCAATTTAACAACATTGCAGGGTCTCTCAAGCAGCTAACTTTGTTTGAGTGGCAACACTACAGGGTTGCCACCAAAAATGTTTTGAAAGCGGGTTTTTTCAAATGAAGATATCTAGATTCGATTAGTATGGGTCATTCATAAAAATTAATTAGGAAAAAAAATAGGTTTATGCACCAAAATCGGATTTTTTACCCATTGTGCACCGGAGGAGTAA
******************************************************..........((((...........((((.((((((((........))))))))))))...))))************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body
....................TTACCAGTTTTTCGCGCCAATTTAAC............................................................................................................................................................................................................. 26 0 20 0.85 17 17 0 0 0
.............................................CAACATTGCAGGGTCTCTCAAGCAGC.................................................................................................................................................................................... 26 0 20 0.30 6 5 0 1 0
....................TGACCAGTTTTTCGCGCCAATTTAAC............................................................................................................................................................................................................. 26 1 20 0.20 4 4 0 0 0
....................TTACCAGTTTTTCGCGCCAATTTAACAAC.......................................................................................................................................................................................................... 29 0 20 0.15 3 3 0 0 0
...........................................................................................CACTACAGGGTTGCCACCAAAAATGTTT.................................................................................................................................... 28 0 20 0.15 3 1 2 0 0
..........................................................................................ACACTACAGGGTTGCCACCAAAAATG....................................................................................................................................... 26 0 20 0.15 3 0 3 0 0
.....................TACCAGTTTTTCGCGCCAATTTAACAAC.......................................................................................................................................................................................................... 28 0 20 0.10 2 2 0 0 0
.....................TACCAGTTTTTCGCGCCAATT................................................................................................................................................................................................................. 21 0 20 0.10 2 1 1 0 0
..........................................................................................................................................................................................................TTTATGCACCAAAATCGGATTTTTTACC..................... 28 0 20 0.10 2 2 0 0 0
..............................................................................................TACAGGGTTGCCACCAAAAATGTTTTGA................................................................................................................................. 28 0 20 0.10 2 2 0 0 0
..............................................AACATTGCAGGGTCTCTCAAGCAGC.................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0
...........................................................................................CACTACAGGGTTGCCACCAAAAATG....................................................................................................................................... 25 0 20 0.10 2 0 2 0 0
.......................................................................................................................................................................................AATTAGGAAAAAAAATAGGTTTATG........................................... 25 0 20 0.10 2 2 0 0 0
......................................................AGGGTCTCTCAAGCAGCTAACTTTG............................................................................................................................................................................ 25 0 19 0.05 1 0 1 0 0
...........................................AACAACATTGCAGGGTCTCTCAAGCAGC.................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
................................................................................................CAGGGTTGCCACCAAAAATGTTTTG.................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
...............................................................CAAGCTGCTAACTTTCTT.......................................................................................................................................................................... 18 2 20 0.05 1 0 0 1 0
.........................AGTTTTTCGCGCCAATTTAAC............................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
..........................................................................................ACACTACAGGGATGCCACCAAAAATG....................................................................................................................................... 26 1 20 0.05 1 0 0 1 0
..............................................................................................................................................................................................................TGCTCCAAAATCGGATTTTTTACCC.................... 25 1 20 0.05 1 1 0 0 0
......................................................................................................TGCCACCAAAAATGTTTTGAAAGCGGG.......................................................................................................................... 27 0 20 0.05 1 0 1 0 0
.................................................................................TGAGTGGCAACACTACAGGGTTG................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
..................GGTTACCAGTTTTTCGCGCCAATTTAAC............................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0
........................................................................................................................................................................................ATTAGGAAAAAAAATAGGTTTATGC.......................................... 25 0 20 0.05 1 0 1 0 0
........................................................................................CAATACTACAGGGTTGCCACCAAAAA......................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
.....................................................................................................................................................TAGATTCGATTAGTATGGGTCATT.............................................................................. 24 0 20 0.05 1 1 0 0 0
.............................................................CACAAGCTGCTAACGTTGTT.......................................................................................................................................................................... 20 3 20 0.05 1 0 1 0 0
........................................................................................CAACACTACAGGGTTGCCACCAAAAATGT...................................................................................................................................... 29 0 20 0.05 1 1 0 0 0
.....................................................................................................................................TTCAAATGAAGATATCTAGA.................................................................................................. 20 0 20 0.05 1 0 1 0 0
.........................................................................................AACACTACAGGGTTGCCACCAAAAA......................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
.................................................................................................................................................TATCTAGATTCGATTAGTATGGGT.................................................................................. 24 0 20 0.05 1 0 0 0 1
...........................TTTTTCGCGCCAATTTAACAACATT....................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
.....................TACCAGGTTTTCGCGCCAATTTAAC............................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0
......................AGCAGTTTTTCGCGCCAATTTAACAACAT........................................................................................................................................................................................................ 29 1 20 0.05 1 1 0 0 0
................................................CATTGCAGGGTCTCTCAAGCAGCT................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0
....................TTACCAGGTTTTCGCGCCAATTTAAC............................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0
..............................................................................................TAAAGGGTTGCCACCAAAAATGTTTTGA................................................................................................................................. 28 1 20 0.05 1 1 0 0 0
..............................................................................................TACAGGGTTGCCACCAAAAATGTTTT................................................................................................................................... 26 0 20 0.05 1 0 1 0 0
....................TTACCAGTTTTTCGCGCCAATTGAACAAC.......................................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................TAGGTTTATGCACCAAAATCGGATTTTT......................... 28 0 20 0.05 1 0 1 0 0
..........................................................................................................................................................................................TAGGAAAAAAAATAGGTTTATGCACC....................................... 26 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

TTCGTCGTTCGTGCGTTTCAAATGGTCAAAAAGCGCGGTTAAATTGTTGTAACGTCCCAGAGAGTTCGTCGATTGAAACAAACTCACCGTTGTGATGTCCCAACGGTGGTTTTTACAAAACTTTCGCCCAAAAAAGTTTACTTCTATAGATCTAAGCTAATCATACCCAGTAAGTATTTTTAATTAATCCTTTTTTTTATCCAAATACGTGGTTTTAGCCTAAAAAATGGGTAACACGTGGCCTCCTCATT
************************************************************************************************************************************..........((((...........((((.((((((((........))))))))))))...))))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V055
head
 V105
male body
.................................CGCGGTTAAATTGTTGTAACGTCCC................................................................................................................................................................................................. 25 0 20 0.25 5 4 1 0 0 0
..................................................................................................CCCAACGGTGGTTTTTACAAAACTTT............................................................................................................................... 26 0 20 0.20 4 4 0 0 0 0
.........................................................................................................................................TTACTTCTATAGATCTAAGCTAATCAT....................................................................................... 27 0 20 0.15 3 2 1 0 0 0
........................................................................................................................................................................................................CCAAATACGTGGTTTTAGCCTAAAAAAT....................... 28 0 20 0.15 3 3 0 0 0 0
....................................................................................................................................................................................................TTATCCAAATACGTGGTTTTAGCCTAA............................ 27 0 20 0.15 3 3 0 0 0 0
.......................................TAAATTGTTGTAACGTCCCAGAGAGTT......................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
.........................................................................................................................................TTACTTCTATAGATCTAAGCTAAT.......................................................................................... 24 0 20 0.10 2 2 0 0 0 0
..................CAAATGGTCAAAAAGCGCGGTTAAATT.............................................................................................................................................................................................................. 27 0 20 0.10 2 1 1 0 0 0
.......................................TAAATTGTTGTAACGTCCCAGAGAGT.......................................................................................................................................................................................... 26 0 20 0.10 2 1 1 0 0 0
.................................CGCGGTTAAATTGTTGTAACGTCCCA................................................................................................................................................................................................ 26 0 20 0.10 2 1 1 0 0 0
.......................GGTCAAAAAGCGCGGTTAAATTGTTGT......................................................................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0
..................................................................................................CCCAACGGTGGTTTTTACAAAACTT................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.............................AAAGCGCGGTTAAATTGTTGTAACGT.................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................AAACTTTCGCCCAAAAAAGTTTACTT............................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
...........................................................................AAACAAACTCACCGTTGTGATGTCCCAA.................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.......................TGTCAAAAAGCGCGGTTAAATTGTTGTA........................................................................................................................................................................................................ 28 1 20 0.05 1 0 1 0 0 0
...........................AAAAAGCGCGGTTAAATTGTTGTAACGT.................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
................................TCGCGGTTAAATTGTTGTAACGTCCCA................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
..............................AAGCGCGGTTAAATTGTTG.......................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
.......................................................................................CGTTGTGATGTCCCAACGGTGGTTT........................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0
.....................ATGGTCAAAAAGCGCGGTTAAATTGT............................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0
..................................................................................................CGCAACGGTGGTTTTTACAAAACTTT............................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
........................................AAATTGTTGTAACGTCCCAGAGAGTT......................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
..............................................................................................................TTTTACAAAACTTTCGCCCAAAAAATT.................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
.................................CGCGGTTAAATTGTTGTAACGGCCCAG............................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
............................................TGTTGTAACGTCCCAGAGAGTTCGTCG.................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.................................CGCGGTTAAATTGTTGTAACGTCC.................................................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................ACTTCTATAGATCTAAGCTAATCAT....................................................................................... 25 0 20 0.05 1 0 1 0 0 0
......................TGGTCAAAAAGCGCGGTTAAAGTGT............................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.......................................TAAATTGTTGTAACGTCCCAGAGATT.......................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
................................................................................................GTCCCAACGGTGGTTTTTACAAAACTTT............................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.............................AAAGCGCGGTTAAATTGTTGTAA....................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................CCCAAAAAAGTTTACTTCTATAGATGT.................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
...................................................GTGTCCCAGAGAGTTCGTC..................................................................................................................................................................................... 19 2 20 0.05 1 0 1 0 0 0
.........................................................................................CTGTGATGTCCCAACGGTGGTTTTTA........................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0
........................................................................................................GGTGGTTTTTACAAAACTTTCGCCCAA........................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................CTTCTATAGATCTAAGCTAATCAT....................................................................................... 24 0 20 0.05 1 1 0 0 0 0
............................................................................................TGATGTCCCAACGGTGGTTTTTACAA..................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.........................TCAAAAAGCGCGGTTAAATTGTTGTAA....................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..........................CACAAAGCGCGGTTAAATTGTCGT......................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................TATCCAAATACGTGGTTTTAGCCTAAA........................... 27 0 20 0.05 1 1 0 0 0 0
...................................................................................................CCAACGGTGGTTTTTACAAAACTTT............................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................TGTGATGTCCCAACGGTGGTTTTTAC....................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................TTTATCCAAATACGTGGTTTTAGCCTAA............................ 28 0 20 0.05 1 1 0 0 0 0
............................................................................................TGATGTCCCAACGGTGGTTTTTACAAAA................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
.......................................................................................CGTTGTGATGTCCCAACGGTGGTT............................................................................................................................................ 24 0 20 0.05 1 0 0 1 0 0
..........................CAAAAAGCGCGGTTAAATTGCTGTAACGT.................................................................................................................................................................................................... 29 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................TTACTTCTATAGATCTCAGCTAATCAT....................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................CTACTTCTATAGATCTAAGCTAATCATA...................................................................................... 28 1 20 0.05 1 1 0 0 0 0
......................TGGTCAAAACGCGGGGTTAAT................................................................................................................................................................................................................ 21 3 20 0.05 1 0 0 0 1 0
..........................CAAAAAGCGCGGTTAAATTGTTGTA........................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
........................................................................................GTTGTGATGTCCCAACGGTGGTTTTT......................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
...............................................................................................................................................CTATAGATCTAAGCTAATCATACCC................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.................................AACGGTTAAATTGTTGTAACGTC................................................................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0
........................................................CCAGAGAGTTCGTGGATTGA............................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................CCAGTAAGTATTTTTAATTAATCCTTT.......................................................... 27 0 20 0.05 1 1 0 0 0 0
.......................................................................................CGTTGTGATGTCCCAACGGTGGTTTT.......................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
..............................AGGCGCGGTTAAATTGTTGTAA....................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 1
.........................................................................................................................................CTACTTCTATAGATCTAAGCTAATCAT....................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................TTACTTCTATAGATCTAAGCTAGT.......................................................................................... 24 1 20 0.05 1 1 0 0 0 0
..................CAAATGGTCAAAAAGCGCGGTTAAAT............................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.........................................................................................................GTGGTTTTTACAAAACTTTCGCCC.......................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
...............................................TGTAACGTCCCAGAGAGTTCGTCGAT.................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
.....................ATGGTCAAAAAGCGCGGTTAA................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................TCGCCCAAAAAAGTTTACTTCTATAGAT.................................................................................................... 28 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12943:225146-225396 - dan_871 AAGCAGCAAGCAC-G--------------------------CAAAGTTTAC--------CAGTTTTTCGCGCCAATTTA-A-CAACATTGC-AGGGTCTCTCAAGCAGCTAACTTTGTTTGAGTGGCAACACTACAGGGTTGCCACCAAAAA-----TGTTT-TGAAAGC-----GGGTTTTTTCA-------AATGAAGATATCTA-GATTCGATTAGTA-----TGGGTCATTCATAAAAATTAAT-TAGGAAAAAAA----ATAGGTTTATGCACCAAAATCGGATTTTTTACCCATTGTGCACCGGAGGAGTAA
droBip1 scf7180000395924:23814-24063 + AAGCAGCAAGCAC-G--------------------------CAAAGTTTAC--------CTGTTTTTCGCGCCAATTTA-A-CAACATTGC-AGGGTCTCTCAAGTAGGTGACTTTGTTTGAGTGGCAACACTACAGGGTTGCCACCAAAAA-----TGTTT-TAAAAGC-----GGTTTTTTTCA-------AATGACGATATCTA-GATTCGATTAGTA-----TGGGCCATTCATAAAAATTAAT-TAAGAAAA-AA----ATAGGTTTATGCACCAAAATCGGATTTTTTACCCATTGTGCGCTGGTAGTGTGA
droKik1 scf7180000302668:20738-20979 - AAACAATGAGCAC-G--------------------------CAAAGTTTAA--------CAATTTTTCGCGCCAATTTT-A-CGGCATTGC-AAAGCCTCTCAAACAGCTGACTTTGTTGGAGTGGCAACACTACAGAGTTGCCATAAAAAA-----ATTTT-GGAAAGT-----GTTTTTTTTCA-------AATGAAGATATCTA-GATTCGATAAATA-----TAGGCCATTTATAAAAATTCAT-TAGGAAAATAA----ATAGGTTTATGCACCAAAATCGGATTTTTTACCCATAGTGCATTG---------
droFic1 scf7180000452073:407-652 + ACAAAATAAACAA-T--------------------------GAAAGTTTGC--------AAAGATTTTTCACTAATTTA-A-GCACACAAA-AAAGTCAATCGAACATCTGACTTTGTTCGTTTATCAACATTATAGTGTTGTTAGTAAAAA-----ATCTT-AGATAAC-----GGTTCTTGGCT-------AATTAGGGTATGTA-AATTCAAAAAATA-----TATTTTATTTTTGAAAATAATT-TGTAAAATAAT----TTGATTTTATGCCAAAAAAATCGACTTTTTTCCCATAGTGCAACGGAAG-----
droEle1 scf7180000491307:18560-18798 - AAACGACGAATAC-G--------------------------CCAAGTTTTC--------CAAA--TTTCGTCCAGTTTA-A-CCACATTGC-AAAGTCTCTAAAACATCTGACTTTGTTGCTGTGACAACACTACAGAGTTGCAAACCTACAA----T-TTT-TGGA-AC-----GCTTTTTTTCA-------AATCATGGTATCTA-GATTCCATTAGTA-----TTGACCATTCTTAAAAATTAAT-TAAGAAACTAA----ATAGCTTTTTGCACCAAAATC-GGGTTTTTACGCATAGTGGATTGG--------
droRho1 scf7180000777449:4180-4389 - CCACAACAAACTA-T--------------------------CAAAGTCGCA--------CAATATTTCGAGCCAATTTC-A-TACAAAA-CAGGTGGTAGATATTCAGCTGACTTTTACAGCTCGCCAGCAGAACAGTGTTGCTCCAT---A-----TGT---TAAAGTTACATATTTTTTTATCT-------GTCTAGGGTGTTTA-AAAATT---AAAATA---AAAAAAATTTTAAG------ATACAGAAAAAAAA----TTGACTTTATCCCAAAAAT-----------------------------------
droBia1 scf7180000302044:4304-4542 + AAATAA---ACAG-T--------------------------AAAGGTTTGC--------CAAGATTTTTCACTAATTTA-A-ACACACAAC-AAAGTCAATCGAACAGCTGACTTTGTTCGTTTATCAACACTAAAGTGTTTTTAGGAAAAAA----A-TTTTAGAAAAC-----GGTTCTTGGCT-------AATTAGGGTATGTA-AATTCAAAAAA-A-----TATTTTATTATTAAAAATAATT-TATAAAATAAT----TTGATTTTATTCCAAAAAAT-TGATTTTTTTCCTATAGTGCAGTGG--------
droTak1 scf7180000410832:6062-6310 - ACATAATTAACAA-G--------------------------CAAAGTAAGC--------AAATTTTTCTCTG-GATTTT-T-CGACACTGC-TAGGTCTCTCTATCAGCCAACTTTGTTGCAGTAGCAAAACTACAGATTTGCCACCAAAAA-----TTTTT-GGAAAGC-----GGTTTTCTTCA-------AATGAAGATGTCAA-GAATCGATTAGTA-----TGGTTCATTCATAAAAATAAAT-TATGAAAATAA----ATAGGTTTATGCACCAAACTG-GGATTTTTACACATAGTGCGTGGGTCAAAAAA
droEug1 scf7180000405467:13205-13456 + AAGTAGAACCTCC-GCAATCTTGTATTAAAATGTGCTATTATTTAGCTCGCCAAAAAGCCAACG-TTTTC-------------------------GATAAACGAACAGCTGACTTTCAGGGCTTCAGAAATTCGCAGGGCTGCAATTTCACCAACGAA-------ATTGC-----GATT---TTTA-------TATGCAACGTTTAA-TATTCTATTAGAATAAAATGTTTCTTTTTTC---CTAACTTAAAAAAAAAAA----ATGGGTTTTTGCAAAAATTTTGGGCATTGGGACCAGTGTGCACTG---------
dm3 chr2R:436968-437170 + TTTT----------------------------------------------------------------------------C-ACAATTCAA-AGCACATCTCAATCAGCTGACTTTGAAAGCGGGCCAAAAATAAACGATAACTAGTAAAAA-----TGTTT-TCAAATT-----ATTTTTATGCT-------ATC-TTGTTACCTAGGAATCAAAAAATG-----AAAGGAGCATTAAAATATCAAT-CACAAAAAAAA----TTACATTAATACCAAAATTTCCGGCTTTTTACCCATAGTGCCTTGG--------
droSim2 node_52464:673-921 + ATTAAAAATAAAC-T--------------------------CAAAGTTTACTATGAAGTCAATT-TTTCCGCCAATTTT-C-ACAATTCAA-AGCACCTCTGAATCAGCTTACTTTGAAAGCGCGCCAAAAATAAACTATTACTCGTAAAAA-----TGTTC-TAAAATT-----ATTTTTATGCT-------ATC-TTGTTATTAGGGAATCAAAAAATT-----AAAGCAGCCTTAAAATATCAAT-CACAAAAAATA----TTACATTTATACCAAAATGTCCGGCTTTTTACCCATAGTGCATTG---------
droSec2 scaffold_112:37909-38153 - TAAAAACAAAC---T--------------------------CAAAGTTTGCTATGAAGACAATT-TTTCCGCCAATTTT-C-ACAATTCAA-AGCACCTCTGAATCAGCTTACTTTGAAAGCGCACCAAAAATAAACTATTACTCGTAAAAA-----TGTTC-TAAAATT-----ATTTTTATGCT-------ATC-TTGTTATTAGGCAATCAAAAAATT-----AAAGCAGCCTTAAAATATCAAT-CACAAAAAAAA----TTACATTAA---CAAAATGTCCGGCTTTTTACCCATAGTGCATGGG--------
droYak3 v2_chrUn_507:34800-34921 - AACCACAAATGTC-G--------------------------CAAAAT---------------GATTTGCTGCCAATTTT-G-TCTTACG-CATATTATCGACAATCAGCTGACTTTGAGAGGTGGGCGATAAGCCTGTGTTGCATATAAAAG-----T------------------------------------------------------------------------------------------------------------------------AAAAATC-GGCTTTT-------------------------
droEre2 scaffold_4929:5134846-5134880 + TGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATC-GGCTCCTT---------CCACCGGCGGAGTGA
dp5 Unknown_group_162:11310-11444 - ATGTGTGAATTTGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAATTTCCCGCCAATTTT-G-TCGCAGGAA-TCAGCTGACTAATCAACTGACTTTGAAGTTTGATCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAACAAAATT-GATT----------------------------
droPer2 scaffold_28:478299-478351 + AGAAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTTATGCACAAATTTCTGACTTTTTGCCCATAGTGCACTGG--------
droWil2 scf2_1100000004887:297659-297876 + AAGAAGCT---------------------------------------------------------TTCCCGCGTTTTTTTC-GATAACCAA-TGCAACCCTAAAACAGCTGACTTTGAATAAGCGTAAAACATTAAGGGCACTCCCTAAAAA-----TTTTT-TAAAATT-----ATTTTTACACTTATTGGAATG-TTTTTAATTAGAAACAAATAAAAA-----AAATCAGATTT------------TCCAAAAAAAATTTTTTTAATTTATGCCAAAATTTTGGGAATTTTACCCAATGTGCA------------
droVir3 scaffold_12726:703723-703743 + CACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCGGCGGCGTTA
droMoj3 scaffold_6540:26641638-26641879 - AAACAATGA--------------------------------CAAAGCTTAA--------TAAATTTTAACGTTG-CATACCGATAATTTAA-GCTTGCATTGAAACAGCTGACTTTAGTTGCGCGTTAAATTTAAATGACTAATTTGAAAAA-----TTTTT-TTAAAAC-----GTTTTTTTCTT-------ATCTAATGTGTCTA-TAATCAAGAAATA-----AGTTAAATTTTCAGTTATGAATACATAAAAAAAA----ATGACTTTATGCCAAAATATCAGACTTTTTGACCATAGTGCACTG------TAG
droGri2 scaffold_14853:5138235-5138255 + CACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCGGTGGCGTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AAGCAGCAAGCAC-G--------------------------CAAAGTTTAC--------CAGTTTTTCGCGCCAATTTA-A-CAACATTGC-AGGGTCTCTCAAGCAGCTAACTTTGTTTGAGTGGCAACACTACAGGGTTGCCACCAAAAA-----TGTTT-TGAAAGC-----GGGTTTTTTCA-------AATGAAGATATCTA-GATTCGATTAGTA-----TGGGTCATTCATAAAAATTAAT-TAGGAAAAAAA----ATAGGTTTATGCACCAAAATCGGATTTTTTACCCATTGTGCACCGGAGGAGTAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................TTAC--------CAGTTTTTCGCGCCAATTTA-A-C...........................................................................................................................................................................................................................................26200.85170170000
..................................................................................CAACATTGC-AGGGTCTCTCAAGCAGC.................................................................................................................................................................................................................26200.306051000
...............................................TTAC--------CAGTTTTTCGCGCCAATTTA-A-CAAC........................................................................................................................................................................................................................................29200.153030000
.................................................................................................................................CACTACAGGGTTGCCACCAAAAA-----TGTTT-...........................................................................................................................................................28200.153210000
................................................................................................................................ACACTACAGGGTTGCCACCAAAAA-----TG...............................................................................................................................................................26200.153300000
................................................TAC--------CAGTTTTTCGCGCCAATTTA-A-CAAC........................................................................................................................................................................................................................................28200.102020000
................................................TAC--------CAGTTTTTCGCGCCAATT.................................................................................................................................................................................................................................................21200.102110000
.............................................................................................................................................................................................................................................................................TTTATGCACCAAAATCGGATTTTTTACC.....................28200.102020000
....................................................................................................................................TACAGGGTTGCCACCAAAAA-----TGTTT-TGA........................................................................................................................................................28200.102020000
...................................................................................AACATTGC-AGGGTCTCTCAAGCAGC.................................................................................................................................................................................................................25200.102020000
.................................................................................................................................CACTACAGGGTTGCCACCAAAAA-----TG...............................................................................................................................................................25200.102200000
.....................................................................................................................................................................................................................................................AAT-TAGGAAAAAAA----ATAGGTTTATG...........................................25200.102020000
............................................................................................AGGGTCTCTCAAGCAGCTAACTTTG.........................................................................................................................................................................................................25190.051100000
..............................................................................A-A-CAACATTGC-AGGGTCTCTCAAGCAGC.................................................................................................................................................................................................................28200.051010000
......................................................................................................................................CAGGGTTGCCACCAAAAA-----TGTTT-TG.........................................................................................................................................................25200.051010000
............................................................AGTTTTTCGCGCCAATTTA-A-C...........................................................................................................................................................................................................................................21200.051010000
............................................................................................................................................TGCCACCAAAAA-----TGTTT-TGAAAGC-----GGG............................................................................................................................................27200.051100000
.......................................................................................................................TGAGTGGCAACACTACAGGGTTG................................................................................................................................................................................23200.051100000
......................................................................................................................................................................................................................................................AT-TAGGAAAAAAA----ATAGGTTTATGC..........................................25200.051100000
.............................................................................................................................................................................................................TA-GATTCGATTAGTA-----TGGGTCATT...................................................................................24200.051010000
..............................................................................................................................CAACACTACAGGGTTGCCACCAAAAA-----TGT..............................................................................................................................................................29200.051010000
......................................................................................................................................................................................TTCA-------AATGAAGATATCTA-GA............................................................................................................20200.051100000
...............................................................................................................................AACACTACAGGGTTGCCACCAAAAA-----.................................................................................................................................................................25200.051010000
.........................................................................................................................................................................................................TATCTA-GATTCGATTAGTA-----TGGGT.......................................................................................24200.051000010
..............................................................TTTTTCGCGCCAATTTA-A-CAACATT.....................................................................................................................................................................................................................................25200.051010000
.....................................................................................CATTGC-AGGGTCTCTCAAGCAGCT................................................................................................................................................................................................................24200.051100000
....................................................................................................................................TACAGGGTTGCCACCAAAAA-----TGTTT-T..........................................................................................................................................................26200.051100000
.........................................................................................................................................................................................................................................................................TAGGTTTATGCACCAAAATCGGATTTTT.........................28200.051100000
.........................................................................................................................................................................................................................................................TAGGAAAAAAA----ATAGGTTTATGCACC.......................................26200.051010000
droBip1
AAGCAGCAAGCAC-G--------------------------CAAAGTTTAC--------CTGTTTTTCGCGCCAATTTA-A-CAACATTGC-AGGGTCTCTCAAGTAGGTGACTTTGTTTGAGTGGCAACACTACAGGGTTGCCACCAAAAA-----TGTTT-TAAAAGC-----GGTTTTTTTCA-------AATGACGATATCTA-GATTCGATTAGTA-----TGGGCCATTCATAAAAATTAAT-TAAGAAAA-AA----ATAGGTTTATGCACCAAAATCGGATTTTTTACCCATTGTGCGCTGGTAGTGTGASizeHit CountTotal NormTotal
No Reads
droKik1
AAACAATGAGCAC-G--------------------------CAAAGTTTAA--------CAATTTTTCGCGCCAATTTT-A-CGGCATTGC-AAAGCCTCTCAAACAGCTGACTTTGTTGGAGTGGCAACACTACAGAGTTGCCATAAAAAA-----ATTTT-GGAAAGT-----GTTTTTTTTCA-------AATGAAGATATCTA-GATTCGATAAATA-----TAGGCCATTTATAAAAATTCAT-TAGGAAAATAA----ATAGGTTTATGCACCAAAATCGGATTTTTTACCCATAGTGCATTG---------SizeHit CountTotal NormTotal
No Reads
droFic1
ACAAAATAAACAA-T--------------------------GAAAGTTTGC--------AAAGATTTTTCACTAATTTA-A-GCACACAAA-AAAGTCAATCGAACATCTGACTTTGTTCGTTTATCAACATTATAGTGTTGTTAGTAAAAA-----ATCTT-AGATAAC-----GGTTCTTGGCT-------AATTAGGGTATGTA-AATTCAAAAAATA-----TATTTTATTTTTGAAAATAATT-TGTAAAATAAT----TTGATTTTATGCCAAAAAAATCGACTTTTTTCCCATAGTGCAACGGAAG-----SizeHit CountTotal NormTotal
No Reads
droEle1
AAACGACGAATAC-G--------------------------CCAAGTTTTC--------CAAA--TTTCGTCCAGTTTA-A-CCACATTGC-AAAGTCTCTAAAACATCTGACTTTGTTGCTGTGACAACACTACAGAGTTGCAAACCTACAA----T-TTT-TGGA-AC-----GCTTTTTTTCA-------AATCATGGTATCTA-GATTCCATTAGTA-----TTGACCATTCTTAAAAATTAAT-TAAGAAACTAA----ATAGCTTTTTGCACCAAAATC-GGGTTTTTACGCATAGTGGATTGG--------SizeHit CountTotal NormTotal
No Reads
droRho1
CCACAACAAACTA-T--------------------------CAAAGTCGCA--------CAATATTTCGAGCCAATTTC-A-TACAAAA-CAGGTGGTAGATATTCAGCTGACTTTTACAGCTCGCCAGCAGAACAGTGTTGCTCCAT---A-----TGT---TAAAGTTACATATTTTTTTATCT-------GTCTAGGGTGTTTA-AAAATT---AAAATA---AAAAAAATTTTAAG------ATACAGAAAAAAAA----TTGACTTTATCCCAAAAAT-----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAATAA---ACAG-T--------------------------AAAGGTTTGC--------CAAGATTTTTCACTAATTTA-A-ACACACAAC-AAAGTCAATCGAACAGCTGACTTTGTTCGTTTATCAACACTAAAGTGTTTTTAGGAAAAAA----A-TTTTAGAAAAC-----GGTTCTTGGCT-------AATTAGGGTATGTA-AATTCAAAAAA-A-----TATTTTATTATTAAAAATAATT-TATAAAATAAT----TTGATTTTATTCCAAAAAAT-TGATTTTTTTCCTATAGTGCAGTGG--------SizeHit CountTotal NormTotal
No Reads
droTak1
ACATAATTAACAA-G--------------------------CAAAGTAAGC--------AAATTTTTCTCTG-GATTTT-T-CGACACTGC-TAGGTCTCTCTATCAGCCAACTTTGTTGCAGTAGCAAAACTACAGATTTGCCACCAAAAA-----TTTTT-GGAAAGC-----GGTTTTCTTCA-------AATGAAGATGTCAA-GAATCGATTAGTA-----TGGTTCATTCATAAAAATAAAT-TATGAAAATAA----ATAGGTTTATGCACCAAACTG-GGATTTTTACACATAGTGCGTGGGTCAAAAAASizeHit CountTotal NormTotal
No Reads
droEug1
AAGTAGAACCTCC-GCAATCTTGTATTAAAATGTGCTATTATTTAGCTCGCCAAAAAGCCAACG-TTTTC-------------------------GATAAACGAACAGCTGACTTTCAGGGCTTCAGAAATTCGCAGGGCTGCAATTTCACCAACGAA-------ATTGC-----GATT---TTTA-------TATGCAACGTTTAA-TATTCTATTAGAATAAAATGTTTCTTTTTTC---CTAACTTAAAAAAAAAAA----ATGGGTTTTTGCAAAAATTTTGGGCATTGGGACCAGTGTGCACTG---------SizeHit CountTotal NormTotal
No Reads
dm3
TTTT----------------------------------------------------------------------------C-ACAATTCAA-AGCACATCTCAATCAGCTGACTTTGAAAGCGGGCCAAAAATAAACGATAACTAGTAAAAA-----TGTTT-TCAAATT-----ATTTTTATGCT-------ATC-TTGTTACCTAGGAATCAAAAAATG-----AAAGGAGCATTAAAATATCAAT-CACAAAAAAAA----TTACATTAATACCAAAATTTCCGGCTTTTTACCCATAGTGCCTTGG--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................TCTCAATCAGCTGACTTTGAAAGCGGGC................................................................................................................................................................................................28110.00100000000000000000000000000000000000000200000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
......................................................................................TTCAA-AGCACATCTCAATCAGCTGAC.............................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................TCTCAATCAGCTGACTTTGAAAGCGGG.................................................................................................................................................................................................2712.0020000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TCCGGCTTTTTACCCATAGTGCCTTGG--------2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTTTATGCT-------ATC-TTGTTACCTAGGAA...........................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AATCAGCTGACTTTGAAAGCG...................................................................................................................................................................................................2151.8090000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000002100000000000000000000000000000000000
................................................................................................................CTTTGAAAGCGGGCCAAAAATAAAC.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................TC-TTGTTACCTAGGAATCAAAAAAT..................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................CTTTGAAAGCGGGCCAAAAATAAACGA...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................TTATGCT-------ATC-TTGTTACCTAGGAATC.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................CAATCAGCTGACTTTGAAAGCGGGC................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ACTTTGAAAGCGGGCCAA.............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CAAATT-----ATTTTTATGCT-------ATC-TTGT.....................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTATGCT-------ATC-TTGTTACCTAGGAA...........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................TCCGGCTTTTTACCCATAGTGCCT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TCAAATT-----ATTTTTATGCT-------ATC-TTGTTAC..................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCACATCTCAATCAGCTGACTTTG.........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TAGGAATCAAAAAATG-----AAAGGAGC....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CAATCAGCTGACTTTGAAAGC....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..................................................................................................TCTCAATCAGCTGACTTTGAAAGCGG..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CAA-AGCACATCTCAATCAGCTGACT............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTT----------------------------------------------------------------------------C-ACAATTCAA-AGCACATCTCAATC....................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TT-----ATTTTTATGCT-------ATC-TTGTTACCTAG..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TCAA-AGCACATCTCAATCAGCTGA..............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCAATCAGCTGACTTTGAAAGCGGGC................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTTTTATGCT-------ATC-TTGTTACCTAGGAA...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................C-TTGTTACCTAGGAATCA........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TC-TTGTTACCTAGGAATCAAAAAA...................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCACATCTCAATCAGCTGACT............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................TTGTTACCTAGGAATCAAAAAATG-----AA..........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................TGAAAGCGGGCCAAAAATAAACGA...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAACTAGTAAAAA-----TGTTT-TCAAATT-----AT.............................................................................................................................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTATGCT-------ATC-TTGTTACCTAGGAATC.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TTTGAAAGCGGGCCAAAAATAAACGATA.................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGCT-------ATC-TTGTTACCTAGGAATCAAAA.....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CAATCAGCTGACTTTGAAAGCGGGCCA..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CTAGGAATCAAAAAATG-----AAAGGAG.....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAACTAGTAAAAA-----TGTTT-TCAAATT-----A..............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................GCT-------ATC-TTGTTACCTAGGAATC.........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TAAACGATAACTAGTAAAAA-----TGTT.............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AAAAATG-----AAAGGAGCATTAAAATA...........................................................................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ATCAGCTGACTTTGAAAGCG...................................................................................................................................................................................................2050.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CCGGCTTTTTACCCATAGTGC.............2170.5740000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000001000
...........................................................................................................................................................................................................................................TTAAAATATCAAT-CACAAAAAAAA----TT....................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TCAAT-CACAAAAAAAA----TTAC..................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AATCAAAAAATG-----AAAGGAGCATTAA...............................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................AA----TTACATTAATACCAAAATTTCCGGC.............................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTTCCGGCTTTTTACCCATAG................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................TTACATTAATACCAAAATTTCCGGCTT...........................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CATTAATACCAAAATTTCCGG..............................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTACATTAATACCAAAATTTCCGGC.............................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TCCGGCTTTTTACCCATAGTG..............2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ACATTAATACCAAAATTTCCGG..............................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TACATTAATACCAAAATTTCCGGCTT...........................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTAATACCAAAATTTCCGGCTT...........................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TAATACCAAAATTTCCGGCTTTT.........................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TAATACCAAAATTTCCGGCTTTTTACCCA...................2940.2510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AAAGGAGCATTAAAATATC.........................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................CACAAAAAAAA----TTACATTG..............................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACCAAAATTTCCGGCTTTTTACCCA...................2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTTCCGGCTTTTTACCCATAGTGC.............2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ATCAGCTGACTTTGAAAG.....................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AATACCAAAATTTCCGGCTTTTTACCCA...................2860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AATACCAAAATTTCCGGCTTT..........................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACCAAAATTTCCGGCTTTTTACC.....................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TTCCGGCTTTTTACCCATAGT...............2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATTAAAAATAAAC-T--------------------------CAAAGTTTACTATGAAGTCAATT-TTTCCGCCAATTTT-C-ACAATTCAA-AGCACCTCTGAATCAGCTTACTTTGAAAGCGCGCCAAAAATAAACTATTACTCGTAAAAA-----TGTTC-TAAAATT-----ATTTTTATGCT-------ATC-TTGTTATTAGGGAATCAAAAAATT-----AAAGCAGCCTTAAAATATCAAT-CACAAAAAATA----TTACATTTATACCAAAATGTCCGGCTTTTTACCCATAGTGCATTG---------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................TATACCAAAATGTCCGGCTTTTTACCCA...................2811.00100000000100000000
.............................................................................................GCACCTCTGAATCAGCTT...............................................................................................................................................................................................................1811.00100000000001000000
............................................................................TTT-C-ACAATTCAA-AGCACCTCTGAA......................................................................................................................................................................................................................2530.33100000010000000000
droSec2
TAAAAACAAAC---T--------------------------CAAAGTTTGCTATGAAGACAATT-TTTCCGCCAATTTT-C-ACAATTCAA-AGCACCTCTGAATCAGCTTACTTTGAAAGCGCACCAAAAATAAACTATTACTCGTAAAAA-----TGTTC-TAAAATT-----ATTTTTATGCT-------ATC-TTGTTATTAGGCAATCAAAAAATT-----AAAGCAGCCTTAAAATATCAAT-CACAAAAAAAA----TTACATTAA---CAAAATGTCCGGCTTTTTACCCATAGTGCATGGG--------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................AA-AGCACCTCTGAATCAGCTT...............................................................................................................................................................................................................2120.5011000
droYak3
AACCACAAATGTC-G--------------------------CAAAAT---------------GATTTGCTGCCAATTTT-G-TCTTACG-CATATTATCGACAATCAGCTGACTTTGAGAGGTGGGCGATAAGCCTGTGTTGCATATAAAAG-----T------------------------------------------------------------------------------------------------------------------------AAAAATC-GGCTTTT-------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTAAATC-GGCTCCTT---------CCACCGGCGGAGTGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................GTAAATC-GGCTCCTT---------CCACCGGCGGAGT..2811.0010000010
dp5
ATGTGTGAATTTGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAATTTCCCGCCAATTTT-G-TCGCAGGAA-TCAGCTGACTAATCAACTGACTTTGAAGTTTGATCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAACAAAATT-GATT----------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................TTTGATCAGAATGACAGGGTTGCAT.............................................................................................................................................................................25362.6718801462041112400
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATT............................................................................................................................................................................26336.67110092401002200
........................................................................................................................TTTGATCAGAATGACAGGGTTGCA..............................................................................................................................................................................24336.00108073101013200
........................................................................................................................TTTGATCAGAATGACAGGGTTGC...............................................................................................................................................................................23323.677114531904800
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATTT...........................................................................................................................................................................27317.005104210005300
........................................................................................................................TTTGATCAGAATGACAGGGTTG................................................................................................................................................................................22315.004504000101300
............GCC-AAGCGCT------------------CAAAGTGAAT--------AAAAATT............................................................................................................................................................................................................................................................2736.672001720001000
...........................................................................TTTT-G-TCGCAGGAA-TCAGCTGAC.........................................................................................................................................................................................................................2316.0060500001000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCAA.............................................................................................................................................................................2535.671701700000000
........................................................................................................................TTTGATCAGAATGACAGGGTT.................................................................................................................................................................................2135.671701200005000
..............................................................................T-G-TCGCAGGAA-TCAGCTGACTAATCAAC.................................................................................................................................................................................................................2813.0030300000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------..............................................2833.0090810000000
..............................................................................T-G-TCGCAGGAA-TCAGCTG...........................................................................................................................................................................................................................1813.0030300000000
.TGTGTGAATTTGCC-AAGCGCT------------------CAAAG................................................................................................................................................................................................................................................................................2632.6780700001000
.............................................................................................................TGACTTTGAAGTTTGATCAGAATGAC.......................................................................................................................................................................................2632.6780100000700
............................................................................................TCAGCTGACTAATCAACTGACTTTG.........................................................................................................................................................................................................2532.0060100000500
...........................................................................TTTT-G-TCGCAGGAA-TCAGCTG...........................................................................................................................................................................................................................2112.0020200000000
........................................................................................................................TTTGATCAGAATGACAGGGT..................................................................................................................................................................................2032.0060600000000
..................................................................TCCCGCCAATTTT-G-TCGCAGG.....................................................................................................................................................................................................................................2122.0040310000000
...........................................................................TTTT-G-TCGCAGGAA-TCAGCT............................................................................................................................................................................................................................2012.0020200000000
...................................................................................................................TGAAGTTTGATCAGAATGACAGGGT..................................................................................................................................................................................2531.6750200000300
..............C-AAGCGCT------------------CAAAGTGAAT--------AAAAATT............................................................................................................................................................................................................................................................2531.6750410000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATA............................................................................................................................................................................2631.3340110000200
...........TGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAA..............................................................................................................................................................................................................................................................2631.3340300100000
.........................................................................................................................TTGATCAGAATGACAGGGTTGCATT............................................................................................................................................................................2541.2550500000000
...........................................................................TTTT-G-TCGCAGGAA-TCAGCTGACT........................................................................................................................................................................................................................2411.0010100000000
..............................................................................T-G-TCGCAGGAA-TCAGCTGACTAATC....................................................................................................................................................................................................................2511.0010100000000
..........TTGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAA..............................................................................................................................................................................................................................................................2731.0030300000000
...........................................................................TTTT-G-TCGCAGGAA-TCAGCTGT..........................................................................................................................................................................................................................2211.0010000100000
..............................................................................T-G-TCGCAGGAA-TCAGCTGACTAATCAAA.................................................................................................................................................................................................................2811.0010100000000
..............................................................................T-G-TCGCAGGAA-TCAGCTGACTAAAA....................................................................................................................................................................................................................2511.0010100000000
.............................................................................TT-G-TCGCAGGAA-TCAGCTGACTAAT.....................................................................................................................................................................................................................2511.0010100000000
.TGTGTGAATTTGCC-AAGCGCT------------------CAAAGT...............................................................................................................................................................................................................................................................................2731.0030000000300
...........TGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAAT.............................................................................................................................................................................................................................................................2731.0030200000100
.............................................................................TT-G-TCGCAGGAA-TCAGCTGAC.........................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................TGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAACAAAATT-GATT----------------------------2511.0010100000000
...........................................................................TTTT-G-TCGCAGGAA-TCAGCTGACTA.......................................................................................................................................................................................................................2511.0010100000000
...................................................................CCCGCCAATTTT-G-TCGCAGGAA-TCAGC.............................................................................................................................................................................................................................2711.0010100000000
............GCC-AAGCGCT------------------CAAAGTGAAT--------AAAAAT.............................................................................................................................................................................................................................................................2631.0030300000000
.........................................................................................................................TTGATCAGAATGACAGGGTTGCAT.............................................................................................................................................................................2441.0040400000000
.......................................................................CCAATTTT-G-TCGCAGGAA-TCAG..............................................................................................................................................................................................................................2211.0010100000000
.....................................................................CGCCAATTTT-G-TCGCAGGAA-TCAG..............................................................................................................................................................................................................................2411.0010100000000
...........................................................................TTTT-G-TCGCAGGAA-TCAG..............................................................................................................................................................................................................................1811.0010000100000
...........................................................................TTTT-G-TCGCAGGAA-TCAGC.............................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................TTTGATCAGAATGACAGGG...................................................................................................................................................................................1931.0030300000000
..............................................................................T-G-TCGCAGGAA-TCAGCTGACTAAT.....................................................................................................................................................................................................................2411.0010100000000
..................................................................................TCGCAGGAA-TCAGCTGACTAATCAA..................................................................................................................................................................................................................2521.0020200000000
.........................................................................................................................TTGATCAGAATGACAGGGTTGC...............................................................................................................................................................................2240.7530300000000
............................................................................................................................ATCAGAATGACAGGGTTGCATT............................................................................................................................................................................2240.7530300000000
.........................................................................................................................TTGATCAGAATGACAGGGTTGCA..............................................................................................................................................................................2340.7530300000000
..............................................TGAAT--------AAAAATTTCCCGCCAATTTT-G-............................................................................................................................................................................................................................................2630.6720200000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCAC.............................................................................................................................................................................2530.6720110000000
...........TGCC-AAGCGCT------------------CAAAGTGAAT--------AAAA...............................................................................................................................................................................................................................................................2530.6720200000000
............................................................................................TCAGCTGACTAATCAACTGACT............................................................................................................................................................................................................2230.6720200000000
..........TTGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAATT............................................................................................................................................................................................................................................................2930.6720110000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATC............................................................................................................................................................................2630.6720020000000
.................................................................................................TGACTAATCAACTGACTTTGAAGTT....................................................................................................................................................................................................2530.6720200000000
........................................................................................................................TTTGATCAGAATGACAGGGA..................................................................................................................................................................................2030.6720200000000
.......................................................................................................................GTTTGATCAGAATGACAGGGTTGCAT.............................................................................................................................................................................2630.6720110000000
..............................................TGAAT--------AAAAATTTCCCGCCAATTT................................................................................................................................................................................................................................................2430.6720200000000
................................................................................G-TCGCAGGAA-TCAGCTGACTAATCAACT................................................................................................................................................................................................................2820.5010100000000
................................................................TTTCCCGCCAATTTT-G-TCGCAGG.....................................................................................................................................................................................................................................2320.5010100000000
..................................................................................TCGCAGGAA-TCAGCTGACTAATCAAC.................................................................................................................................................................................................................2620.5010010000000
..........................................................................................................................TGATCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------..............................................2640.5020200000000
...................................................................................CGCAGGAA-TCAGCTGACTAATCAAC.................................................................................................................................................................................................................2520.5010100000000
..................................................................TCCCGCCAATTTT-G-TCGCAG......................................................................................................................................................................................................................................2020.5010100000000
.................................................................TTCCCGCCAATTTT-G-TCGCAGGAA-..................................................................................................................................................................................................................................2420.5010100000000
..................................................................TCCCGCCAATTTT-G-TCGCAGGAA-TCA...............................................................................................................................................................................................................................2620.5010100000000
.................................................................TTCCCGCCAATTTT-G-TCGCAGG.....................................................................................................................................................................................................................................2220.5010100000000
..........................................................................................................................TGATCAGAATGACAGGGTTGCAT.............................................................................................................................................................................2340.5020100001000
..........................................................................................................................TGATCAGAATGACAGGGTTGCATT............................................................................................................................................................................2440.5020200000000
..................................................................TCCCGCCAATTTT-G-TCGCAGGAA-A.................................................................................................................................................................................................................................2420.5010100000000
............................................................................................................................................TGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAACAAAAT..................................2030.3310100000000
.........................................CAAAGTGAAT--------AAAAATTTCCCGC......................................................................................................................................................................................................................................................2330.3310100000000
..........TTGCC-AAGCGCT------------------CAAAGTGAAT--------AAA................................................................................................................................................................................................................................................................2530.3310100000000
.........................................................................................................CAACTGACTTTGAAGTTTGATCAGAA...........................................................................................................................................................................................2630.3310100000000
...TGTGAATTTGCC-AAGCGCT------------------C....................................................................................................................................................................................................................................................................................2030.3310100000000
..................................................................................................................TTGAAGTTTGATCAGAATGACAGGG...................................................................................................................................................................................2530.3310100000000
.................AGCGCT------------------CAAAGTGAAT--------AAAAATTTCCCG.......................................................................................................................................................................................................................................................2830.3310100000000
.............................................................................................................TGACTTTGAAGTTTGATCAGAA...........................................................................................................................................................................................2230.3310000100000
...................CGCT------------------CAAAGTGAAT--------AAAAATTTCCC........................................................................................................................................................................................................................................................2530.3310100000000
..........................................AAAGTGAAT--------AAAAATTTCCCGCCAA...................................................................................................................................................................................................................................................2530.3310100000000
..............C-AAGCGCT------------------CAAAGTGAAT--------AAAAATTT...........................................................................................................................................................................................................................................................2630.3310100000000
...................................................................................................................................TGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAACA......................................2530.3310100000000
...TGTGAATTTGCC-AAGCGCT------------------CAAAG................................................................................................................................................................................................................................................................................2430.3310100000000
.................................................................................................TGACTAATCAACTGACTTTGAAGT.....................................................................................................................................................................................................2430.3310100000000
..............C-AAGCGCT------------------CAAAGTGAAT--------AAAAAT.............................................................................................................................................................................................................................................................2430.3310100000000
.............................................................................................................TGACTTTGAAGTTTGATCAGAATGA........................................................................................................................................................................................2530.3310000000010
............................................................................................TCAGCTGACTAATCAACTGACTT...........................................................................................................................................................................................................2330.3310100000000
...................................................................................................................TGAAGTTTGATCAGAATGACAGGG...................................................................................................................................................................................2430.3310100000000
.......................................................................................................................GTTTGATCAGAATGACAGGGTTGCA..............................................................................................................................................................................2530.3310100000000
...............................................GAAT--------AAAAATTTCCCGCCAATTT................................................................................................................................................................................................................................................2330.3310100000000
ATGTGTGAATTTGCC-AAGCGCT------------------CAAAG................................................................................................................................................................................................................................................................................2730.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATG............................................................................................................................................................................2630.3310000100000
........................................................................................................................TTTGATCAGAATGACAGGGAA.................................................................................................................................................................................2130.3310100000000
.............................................................................................CAGCTGACTAATCAACTGACTT...........................................................................................................................................................................................................2230.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCAACA...........................................................................................................................................................................2730.3310000000100
.....TGAATTTGCC-AAGCGCT------------------CAAAGTGA.............................................................................................................................................................................................................................................................................2530.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCAAA............................................................................................................................................................................2630.3310000100000
.............................................................................................CAGCTGACTAATCAACTGACTTTG.........................................................................................................................................................................................................2430.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------T.............................................2930.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCC..............................................................................................................................................................................2430.3310010000000
.............CC-AAGCGCT------------------CAAAGTGAAT--------AAAAAT.............................................................................................................................................................................................................................................................2530.3310100000000
............GCC-AAGCGCT------------------CAAAGTGAAT--------AAAAA..............................................................................................................................................................................................................................................................2530.3310100000000
.....................................................................................................TAATCAACTGACTTTGAAGTTTGA.................................................................................................................................................................................................2430.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCAAAA...........................................................................................................................................................................2730.3310100000000
...................................................................................................................TGAAGTTTGATCAGAATGACAGG....................................................................................................................................................................................2330.3310100000000
............................................................................................TCAGCTGACTAATCAACTG...............................................................................................................................................................................................................1930.3310100000000
.TGTGTGAATTTGCC-AAGCGCT------------------CA...................................................................................................................................................................................................................................................................................2330.3310100000000
..............................................................................................AGCTGACTAATCAACTGACTTTGAAG......................................................................................................................................................................................................2630.3310100000000
.........TTTGCC-AAGCGCT------------------CAAAGTGAAT--------AAA................................................................................................................................................................................................................................................................2630.3310100000000
.....................................................................................................TAATCAACTGACTTTGAAGT.....................................................................................................................................................................................................2030.3310000100000
.....................CT------------------CAAAGTGAAT--------AAAAATTTCCCGC......................................................................................................................................................................................................................................................2530.3310100000000
..................GCGCT------------------CAAAGTGAAT--------AAAAATT............................................................................................................................................................................................................................................................2230.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTT................................................................................................................................................................................2230.3310010000000
..................................................................................................GACTAATCAACTGACTTTGAAGT.....................................................................................................................................................................................................2330.3310100000000
.............................................................................................CAGCTGACTAATCAACTGACTTT..........................................................................................................................................................................................................2330.3310100000000
..............................................TGAAT--------AAAAATTTCCCGCCAATTTT-G-T...........................................................................................................................................................................................................................................2730.3310100000000
........................................................................................................................TTTGATCAGAATGACAGGGTTGCT..............................................................................................................................................................................2430.3310010000000
..........TTGCC-AAGCGCT------------------CAAAGTGAAT--------AAAAAT.............................................................................................................................................................................................................................................................2830.3310100000000
............GCC-AAGCGCT------------------CAAAGTGAAT--------AAAA...............................................................................................................................................................................................................................................................2430.3310100000000
..................................................................................................................................ATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCA.........................................2340.2510100000000
.........................................................................................................................TTGATCAGAATGACAGGGTTGCAA.............................................................................................................................................................................2440.2510100000000
.................................................................................................................................AATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAA........................................2540.2510100000000
...........................................................................................................................GATCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------..............................................2540.2510100000000
.....................................................................................................TAATCAACTGACTTTGAAGG.....................................................................................................................................................................................................2040.2510100000000
.............................................................................................................................TCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCA.........................................2840.2510100000000
..............................................................................................................................CAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------..............................................2240.2510100000000
...........................................................................................................................GATCAGAATGACAGGGTTGCATTT...........................................................................................................................................................................2440.2510100000000
................................................................................................................................GAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------TAGCAA........................................2640.2510010000000
.........................................................................................................................TTGATCAGAATGACAGGGTTG................................................................................................................................................................................2140.2510100000000
.............................................................................................................................TCAGAATGACAGGGTTGCATTTT----------------------------------------------------------------------------------------------------------------------------..............................................2340.2510100000000
..........................................................................................................................TGATCAGAATGACAGGGTTGC...............................................................................................................................................................................2140.2510100000000
.................................................................................................TGACTAATCAACTGACTTTGAAG......................................................................................................................................................................................................2340.2510000000100
.........................................................................................................................TTGATCAGAATGACAGGGTTGT...............................................................................................................................................................................2240.2510100000000
.................................................................................................TGACTAATCAACTGACTTTGAA.......................................................................................................................................................................................................2240.2510100000000
droPer2
AGAAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTTTATGCACAAATTTCTGACTTTTTGCCCATAGTGCACTGG--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AAGAAGCT---------------------------------------------------------TTCCCGCGTTTTTTTC-GATAACCAA-TGCAACCCTAAAACAGCTGACTTTGAATAAGCGTAAAACATTAAGGGCACTCCCTAAAAA-----TTTTT-TAAAATT-----ATTTTTACACTTATTGGAATG-TTTTTAATTAGAAACAAATAAAAA-----AAATCAGATTT------------TCCAAAAAAAATTTTTTTAATTTATGCCAAAATTTTGGGAATTTTACCCAATGTGCA------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................TGAATAAGCGTAAAACATTAAGGGC..................................................................................................................................................................................25143.36470151301
...................................................................................................................TGAATAAGCGTAAAACATTAAGGGCAC................................................................................................................................................................................27123.2539133050
..................................................................................................................TTGAATAAGCGTAAAACATTAAGGGC..................................................................................................................................................................................26141.7124060180
..........................................................................TTTTTTC-GATAACCAA-TGCAACCCT.........................................................................................................................................................................................................................25121.331609160
..................................................................................................................TTGAATAAGCGTAAAACATTAAGGGCAC................................................................................................................................................................................28121.1714012020
....................................................................................................TAAAACAGCTGACTTTGAATAAGCG.................................................................................................................................................................................................25141.1416011050
...................................................................................................................TGAATAAGCGTAAAACATTAAGGGCA.................................................................................................................................................................................26130.9212010020
....................................................................................TAACCAA-TGCAACCCTAAAACAGCTGACT............................................................................................................................................................................................................29130.8511011000
............................................................................TTTTC-GATAACCAA-TGCAACCCTAAAAC....................................................................................................................................................................................................................28120.831006040
.......................................................................................................................TAAGCGTAAAACATTAAGGGCACTCCC............................................................................................................................................................................27110.82906030
........................................................................................................................AAGCGTAAAACATTAAGGGCACTCCC............................................................................................................................................................................26110.82902070
...................................................................................................................TGAATAAGCGTAAAACATTAAGGG...................................................................................................................................................................................24140.791104070
....................................................................................................TAAAACAGCTGACTTTGAATAAGCGT................................................................................................................................................................................................26140.57810070
..............................................................................TTC-GATAACCAA-TGCAACCCTAAAACAGC.................................................................................................................................................................................................................29130.46606000
..................................................................................................................TTGAATAAGCGTAAAACATTAAGGG...................................................................................................................................................................................25140.43601050
...................................................................................................................TGAATAAGCGTAAAACATTAAGGGCACT...............................................................................................................................................................................28110.36404000
.......................................................................................................................TAAGCGTAAAACATTAAGGGCACTCC.............................................................................................................................................................................26110.36402020
............................................................................................TGCAACCCTAAAACAGCTGACTTTGAA.......................................................................................................................................................................................................27120.33404000
....................................................................................................................GAATAAGCGTAAAACATTAAGGGCAC................................................................................................................................................................................26120.33404000
............................................................................TTTTC-GATAACCAA-TGCAACCCTAAAA.....................................................................................................................................................................................................................27120.33404000
....................................................................................TAACCAA-TGCAACCCTAAAACAGCTG...............................................................................................................................................................................................................26130.31404000
....................................................................................TAACCAA-TGCAACCCTAAAACAGC.................................................................................................................................................................................................................24130.31404000
....................................................................................TAACCAA-TGCAACCCTAAAACAGCT................................................................................................................................................................................................................25130.31403010
..................................................................................................................TTGAATAAGCGTAAAACATTAAGGGCA.................................................................................................................................................................................27130.31403010
.............................................................................................................TGACTTTGAATAAGCGTAAAACATTAAG.....................................................................................................................................................................................28140.29404000
..........................................................................................................................................................................................TATTGGAATG-TTTTTAATTAGAAACA.........................................................................................................26120.25301020
.............................................................................TTTC-GATAACCAA-TGCAACCCTAAAAC....................................................................................................................................................................................................................27120.25302010
..........................................................................TTTTTTC-GATAACCAA-TGCAACCC..........................................................................................................................................................................................................................24120.25302010
...............................................................................TC-GATAACCAA-TGCAACCCTAAAACAGC.................................................................................................................................................................................................................28130.23302010
.............................................................................................................TGACTTTGAATAAGCGTAAAACAT.........................................................................................................................................................................................24140.21303000
.....................................................................................................AAAACAGCTGACTTTGAATAAGCG.................................................................................................................................................................................................24140.21303000
.............................................................................................................TGACTTTGAATAAGCGTAAAACATT........................................................................................................................................................................................25140.21301020
....................................................................................................................GAATAAGCGTAAAACATTAAGGGCACT...............................................................................................................................................................................27110.18201100
..........................................................................TTTTTTC-GATAACCAA-TGCAACCCTAA.......................................................................................................................................................................................................................27120.17201010
.........................................................................TTTTTTTC-GATAACCAA-TGCAACCC..........................................................................................................................................................................................................................25120.17201010
............................................................................TTTTC-GATAACCAA-TGCAACCCTAA.......................................................................................................................................................................................................................25120.17202000
...........................................................................TTTTTC-GATAACCAA-TGCAACCCT.........................................................................................................................................................................................................................24120.17202000
.........................................................................TTTTTTTC-GATAACCAA-TGCAACCCTA........................................................................................................................................................................................................................27120.17200020
.............................................................................TTTC-GATAACCAA-TGCAACCCTAAA......................................................................................................................................................................................................................25120.17201010
............................................................................TTTTC-GATAACCAA-TGCAACCC..........................................................................................................................................................................................................................22120.17200020
............................................................................TTTTC-GATAACCAA-TGCAACCCTAAA......................................................................................................................................................................................................................26120.17202000
....................................................................................................................................................................................TACACTTATTGGAATG-TTTTTAAT.................................................................................................................24130.15201010
..................................................................TCCCGCGTTTTTTTC-GATAACCAA-TGCA..............................................................................................................................................................................................................................28130.15202000
..................................................................TCCCGCGTTTTTTTC-GATAACCAA-..................................................................................................................................................................................................................................24130.15202000
....................................................................................................................GAATAAGCGTAAAACATTAAGGG...................................................................................................................................................................................23140.14201010
...................................................................................................................TGAATAAGCGTAAAACATTAAGGGCACTC..............................................................................................................................................................................29100.10101000
................................................................................................................................AACATTAAGGGCACTCCCTAAAAA-----T................................................................................................................................................................25110.09101000
..............................................................................................................................AAAACATTAAGGGCACTCCCTAAAAT-----.................................................................................................................................................................26110.09101000
..................................................................................................................TTGAATAAGCGTAAAACATTAAGGGCACT...............................................................................................................................................................................29110.09101000
.........................................................................................................................AGCGTAAAACATTAAGGGCACTCCC............................................................................................................................................................................25110.09100010
.................................................................................................................................................................................................................................................................................TGCCAAAATTTTGGGAATTTTACCCAATG................29120.08101000
............................................................................................TGCAACCCTAAAACAGCTGACTTTG.........................................................................................................................................................................................................25120.08101000
.....................................................................................................................................................................................................................................................................................AAAATTTTGGGAATTTTACCCAATG................25120.08101000
..GAAGCT---------------------------------------------------------TTCCCGCGTTTTTTTC-GA..........................................................................................................................................................................................................................................24120.08100010
.......................................................................CGTTTTTTTC-GATAACCAA-TGCAACCC..........................................................................................................................................................................................................................27120.08101000
.....................................................................CGCGTTTTTTTC-GATAACCAA-TGCAACC...........................................................................................................................................................................................................................28120.08101000
.........................................................................TTTTTTTC-GATAACCAA-TGCAACCCC.........................................................................................................................................................................................................................26120.08100010
..........................................................................................................................................................................................TATTGGAATG-TTTTTAATTAGAAACAAA.......................................................................................................28120.08100010
.........................................................................TTTTTTTC-GATAACCAA-TGCAACCCT.........................................................................................................................................................................................................................26120.08100010
............................................................................TTTTC-GATAACCAA-TGCAACCCT.........................................................................................................................................................................................................................23120.08101000
.AGAAGCT---------------------------------------------------------TTCCCGCGTTTTTTTC-GATG........................................................................................................................................................................................................................................27120.08100010
............................................................................TTTTC-GATAACCAA-TGCAACCCTAAAACA...................................................................................................................................................................................................................29120.08101000
...AAGCT---------------------------------------------------------TTCCCGCGTTTTTTTC-GAT.........................................................................................................................................................................................................................................24120.08100010
.............................................................................................................................................................................................................................................................................TTTATGCCAAAATTTTGGGAATTTTACC.....................28120.08100010
.............................................................................TTTC-GATAACCAA-TGCAACCCTAAAA.....................................................................................................................................................................................................................26120.08100010
.............................................................................................................................................................................................TGGAATG-TTTTTAATTAGAAACAAATA.....................................................................................................27120.08101000
..GAAGCT---------------------------------------------------------TTCCCGCGTTTTTTTC-GATA........................................................................................................................................................................................................................................26120.08101000
............................................................................TTTTC-GATAACCAA-TGCAACCCTAAAACC...................................................................................................................................................................................................................29120.08101000
...........................................................................TTTTTC-GATAACCAA-TGCAACCCTAAAA.....................................................................................................................................................................................................................28120.08101000
...................................................................................................CTAAAACAGCTGACTTTG.........................................................................................................................................................................................................18120.08100010
.................................................................................................................TTTGAATAAGCGTAAAACATTAAGGGCAC................................................................................................................................................................................29120.08101000
.............................................................................TTTC-GATAACCAA-TGCAACCCTAAAACAG..................................................................................................................................................................................................................29120.08101000
...................................................................................................CTAAAACAGCTGACTTTGAATAAGCG.................................................................................................................................................................................................26120.08101000
.............................................................................................GCAACCCTAAAACAGCTGACTTTG.........................................................................................................................................................................................................24120.08101000
...........................................................................TTTTTC-GATAACCAA-TGCAACCCTAAAAC....................................................................................................................................................................................................................29120.08101000
............................................................................................TGCAACCCTAAAACAGCTGACTTTGA........................................................................................................................................................................................................26120.08101000
..........................................................................TTTTTTC-GATAACCAA-TGCAACC...........................................................................................................................................................................................................................23120.08101000
.................................................................................................................................................................................................ATG-TTTTTAATTAGAAACAAATA.....................................................................................................23120.08101000
..................................................................TCCCGCGTTTTTTTC-GATAACCAA-TGC...............................................................................................................................................................................................................................27130.08100010
..................................................................TCCCGCGTTTTTTTC-GATAACCAA-T.................................................................................................................................................................................................................................25130.08101000
.....................................................................................AACCAA-TGCAACCCTAAAACAGCTGAGA............................................................................................................................................................................................................28130.08101000
........................................................................................CAA-TGCAACCCTAAAACAGCT................................................................................................................................................................................................................21130.08101000
................................................................................C-GATAACCAA-TGCAACCCTAAAACAG..................................................................................................................................................................................................................26130.08100010
..................................................................................GATAACCAA-TGCAACCCTAAAAC....................................................................................................................................................................................................................23130.08101000
..............................................................................TTC-GATAACCAA-TGCAACCCTAAAACAG..................................................................................................................................................................................................................28130.08101000
..........................................................................................................................................................................................TATTGGAATG-TTTTTAATTAGAAA...........................................................................................................24130.08100010
.....................................................................................AACCAA-TGCAACCCTAAAACAGCTGACTT...........................................................................................................................................................................................................29130.08101000
............................................................................................TGCAACCCTAAAACAGCTGACTT...........................................................................................................................................................................................................23130.08101000
..............................................................................TTC-GATAACCAA-TGCAACCCTAAAACA...................................................................................................................................................................................................................27130.08101000
.................................................................TTCCCGCGTTTTTTTC-GATAACCA....................................................................................................................................................................................................................................24130.08101000
...............................................................................TC-GATAACCAA-TGCAACCCTAAAACA...................................................................................................................................................................................................................26130.08101000
..............................................................................TTC-GATAACCAA-TGCAACCCTAAAAC....................................................................................................................................................................................................................26130.08101000
....................................................................................................................................................................................TACACTTATTGGAATG-TTTTTAATTAGAA............................................................................................................29130.08101000
.................................................................TTCCCGCGTTTTTTTC-GATAACCAA-TG................................................................................................................................................................................................................................27130.08101000
.....................................................................................................AAAACAGCTGACTTTGAATAAGCGT................................................................................................................................................................................................25140.07100010
............................................................................................................CTGACTTTGAATAAGCGTAAAACATTAAG.....................................................................................................................................................................................29140.07101000
...................................................................................................................TGAATAAGCGTAAAACATTAAGG....................................................................................................................................................................................23140.07100010
....................................................................................................................GAATAAGCGTAAAACATTAAGG....................................................................................................................................................................................22140.07100010
.................................................................................................................TTTGAATAAGCGTAAAACATTAAGGG...................................................................................................................................................................................26140.07101000
.....................................................................................................AAAACAGCTGACTTTGAATAAGCGTA...............................................................................................................................................................................................26140.07100010
.................................................................................................................TTTGAATAAGCGTAAAACATTAAGGGC..................................................................................................................................................................................27140.07100010
.................................................................................................................................................................................................................................................................................TGCCAAAATTTTGGGAATTTTACC.....................24140.07101000
.............................................................................................................TGACTTTGAATAAGCGTAAAACATTAA......................................................................................................................................................................................27140.07101000
droVir3
CACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCGGCGGCGTTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.ACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCGGCGGCGTT.1911.001000001000000000000000000000000000000000000000000000000000000000
droMoj3
AAACAATGA--------------------------------CAAAGCTTAA--------TAAATTTTAACGTTG-CATACCGATAATTTAA-GCTTGCATTGAAACAGCTGACTTTAGTTGCGCGTTAAATTTAAATGACTAATTTGAAAAA-----TTTTT-TTAAAAC-----GTTTTTTTCTT-------ATCTAATGTGTCTA-TAATCAAGAAATA-----AGTTAAATTTTCAGTTATGAATACATAAAAAAAA----ATGACTTTATGCCAAAATATCAGACTTTTTGACCATAGTGCACTG------TAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................TTAACGTTG-CATACCGATAATTTAA-GC................................................................................................................................................................................................................................2750.603000030
.................................................................TTAACGTTG-CATACCGATAATTTAA-GCT...............................................................................................................................................................................................................................2850.603100011
.............................................................................TACCGATAATTTAA-GCTTGCATTG........................................................................................................................................................................................................................2450.402200000
................................................TAA--------TAAATTTTAACGTTG-CATACCGA...........................................................................................................................................................................................................................................2650.402200000
........................................................................TG-CATACCGATAATTTAA-GCTTGC............................................................................................................................................................................................................................2450.402200000
...................................................................................TAATTTAA-GCTTGCATTGAAACAGC.................................................................................................................................................................................................................2540.251000010
..............................................................................................................GACTTTAGTTGCGCGTTAAATTTAA.......................................................................................................................................................................................2540.251100000
.............................................................................TACCGATAATTTAA-GCTTGCATTGAAAC....................................................................................................................................................................................................................2840.251100000
...............................................................................................TGCATTGAAACAGCTGACTTTAGTTG.....................................................................................................................................................................................................2640.251100000
..............................................................................................TTGCATTGAAACAGCTGACTTTAGTT......................................................................................................................................................................................................2640.251100000
.............................................................................................................TGACTTTAGTTGCGCGTTAAATTTAAATG....................................................................................................................................................................................2940.251100000
....................................................................................................TGAAACAGCTGACTTTAGTTGCGCGT................................................................................................................................................................................................2640.251000001
...................................................................................................TTGAAACAGCTGACTTTAGTTGCGCGT................................................................................................................................................................................................2740.251100000
..............................................................................ACCGATAATTTAA-GCTTGCATTGAAA.....................................................................................................................................................................................................................2650.201100000
.........................................................................G-CATACCGATAATTTAA-GCTTGCAT..........................................................................................................................................................................................................................2550.201100000
.....................................................................CGTTG-CATACCGATAATTTAA-GCTT..............................................................................................................................................................................................................................2550.201100000
..................................................................TAACGTTG-CATACCGATAATTTAA-GC................................................................................................................................................................................................................................2650.201100000
................................................................TTTAACGTTG-CATACCGATAATTTA....................................................................................................................................................................................................................................2550.201100000
.................................................................TTAACGTTG-CATACCGATAATTT.....................................................................................................................................................................................................................................2350.201100000
.............................................................................TACCGATAATTTAA-GCTTGCATTGAA......................................................................................................................................................................................................................2650.201100000
...............................................TTAA--------TAAATTTTAACGTTG-CATACCG............................................................................................................................................................................................................................................2650.201100000
........................................................................TG-CATACCGATAATTTAA-GCTTGCA...........................................................................................................................................................................................................................2550.201100000
....................................................................ACGTTG-CATACCGATAATTTAA-GCTTG.............................................................................................................................................................................................................................2750.201100000
.............................................................................................................................................................................................................................................................................TTTATGCCAAAATATCAGACTTTTTG.......................2650.201100000
........................................................................TG-CATACCGATAATTTAA-GCTTGCAT..........................................................................................................................................................................................................................2650.201000010
droGri2
CACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCGGTGGCGTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:33 PM