ID:

dan_819

 Coordinate:

scaffold_12929:2285131-2285281 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.8 -25.7

Flybase annnotation

CDS [Dana\GF21948-cds]; exon [dana_GLEANR_5947:30]; intron [Dana\GF21948-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGCCAGCAGGCAGCACCTGCCACCGACCTACGTCGACTTGCAAGTCATAAGTGAGTAATCGCCCCCGGGTTAGCCGAACGAATCGTCCGGTCCGCCGATCAGCTCCAGCTCAGAGGTGGAGCCGGATCCGGATCCGCAGCAGTAATCTATCTATCTCCCAACAAAAAAATTCCAATATATTCCCAAAAAGAAACACTTTCCTTTCCAAAAAATATCCCTCCCCCATTACTTCTTCGACCAATATCCTTGAT
***********************************************************************************....(((((((..((((.((((((.((...)).))))))..)))))))).))).......************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V055
head
 M044
female body
...................................................................................CGTCCGGTCCGCCGATCAGCTCCA................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0
.GCCAGCAGGCAGCACCTGCCACCGAC................................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
...............................................................................GAATCGTCCGGTCCGCCGATC....................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...........................CTACGTCGACTTGCAAGT.............................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0
.......................................................................AGCCGAACGAATCGTCCGGTCCGCC........................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...........................................................................GAACGAATCGTCCGGTCCGCCGATC....................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...........AGCACCTGCCACCGACCTACGTC......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................ATCCCTCCCCCATTACTTCTTCGACCAAT......... 29 0 1 1.00 1 1 0 0 0
...............................................................................GAATCGTCCGGTCCGCCGATCAGCT................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...........................CTACGTCGACTTGCAAGTCATAA......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.............................ACGTCGACTTGCAAGTCATAAC........................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 1
............................................................................................................................GATCCGGATCCGCAGCAGT............................................................................................................ 19 0 1 1.00 1 1 0 0 0
.............................................................................CCGAATCGTCCGGTCCGCCGATCAGCTCC................................................................................................................................................. 29 1 1 1.00 1 1 0 0 0
...............................................................................................................................................AATCTATCTATCTCCCAACA........................................................................................ 20 0 1 1.00 1 1 0 0 0
................................................................................AATCGTCCGGTCCGCCGATCAGCT................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................AATTCCAATATATTCCCAAAAAG............................................................. 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................................AGTCTATCTATCTCCCAACAAAAA.................................................................................... 24 1 1 1.00 1 1 0 0 0
.............................................................................ACGAATCGTCCGGTCCGCCGAT........................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................AAAATTCCAATATATTCCCAAA................................................................ 22 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................AGAAAAATTCCAATATATTCCC................................................................... 22 1 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................ACTTCTTCGACCAATATCCTT... 21 0 1 1.00 1 0 1 0 0
................................................................................................................GAGGTGGAGCCGGATCCGGATCC.................................................................................................................... 23 0 1 1.00 1 1 0 0 0
......................................TGCAAGTCATAAGTGAGT................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
...................................................................................................................................ATCCGCAGCAGTAATCTATCTATCTCCC............................................................................................ 28 0 1 1.00 1 1 0 0 0
....................................................................................................AGCTCCAGCTCAGAGGTGGA................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
......................................................................................CCGGTCCGCCGCTCGGCT................................................................................................................................................... 18 2 3 0.33 1 0 0 1 0
................................................................................................TATCAGCTCCAGCTTTGAGGT...................................................................................................................................... 21 3 5 0.20 1 0 1 0 0
.......................................................................................CGGTCCGACGATCTGCTC.................................................................................................................................................. 18 2 7 0.14 1 1 0 0 0
............................................................................................................................................................................................................CCAAAAAATAACCCCCCCC............................ 19 2 12 0.08 1 1 0 0 0
.....................................................................................................GCTCTAGCTCAGTGGTCGA................................................................................................................................... 19 3 20 0.05 1 0 1 0 0
.....................ACCGACGTACCTCGGCTT.................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

CCGGTCGTCCGTCGTGGACGGTGGCTGGATGCAGCTGAACGTTCAGTATTCACTCATTAGCGGGGGCCCAATCGGCTTGCTTAGCAGGCCAGGCGGCTAGTCGAGGTCGAGTCTCCACCTCGGCCTAGGCCTAGGCGTCGTCATTAGATAGATAGAGGGTTGTTTTTTTAAGGTTATATAAGGGTTTTTCTTTGTGAAAGGAAAGGTTTTTTATAGGGAGGGGGTAATGAAGAAGCTGGTTATAGGAACTA
************************************************************************************************************....(((((((..((((.((((((.((...)).))))))..)))))))).))).......*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M044
female body
 V039
embryo
 V106
head
 V105
male body
.............................................................................................................AGTCTCCACCTCGACCTACGCCT....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
...............GGACAATGGCTGGATGCAG......................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 1 0 0
...............GGACGGTGACTGGATGCAGG........................................................................................................................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0
......................................................CCTTTGCTGGGGCCCAATCG................................................................................................................................................................................. 20 3 2 0.50 1 1 0 0 0 0
.............................................................................................CGGATAGTCGAGGTCGCG............................................................................................................................................ 18 2 7 0.29 2 0 0 0 2 0
.............................................................GGGGGCCCAACTGGCTTGG........................................................................................................................................................................... 19 3 4 0.25 1 0 0 0 1 0
...............GGACGGTGACTCGATGCAG......................................................................................................................................................................................................................... 19 2 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................................................................GGGATAATGAAGAGGCAGGT........... 20 3 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................GGGGTATTCAAGAGGCTGGT........... 20 3 8 0.13 1 1 0 0 0 0
...................................................TCTCCTTAGCGTGGGCCCAA.................................................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0
..............TCGATGGTGGCTCGATGCAG......................................................................................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0
...............GGACGGTGACTCGATGCA.......................................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 0 1
................................CGCTGAACGTACAGAATTC........................................................................................................................................................................................................ 19 3 15 0.07 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12929:2285081-2285331 - dan_819 GGCCAGCAGGCAGCACCTGCCACCGACCTACGTCGACT-TGCAAGTCATAAGTGAGTAAT-CGCCC---CC-GGG------TT-----A---------------GCC------G--AACGAATCGTCCGGTCCGCCGAT-----------------------------------------CAGCTCCAGCTCAGAGGTGGAG---------CCGGATCC------------G------GATCCGCAGCAGT----AATCTATCTA------------------------------------------TCTCC---CAACAA--AAAAATTCCAATATA--------------TTCCC-----------AAAAAGAAACACTTTCCTTTCC---------------------------------------------------------------------------------------------------------------------AAAAAATAT--------------------------------------CCCTCCCCCATTACTTCTTCGACC-AATATCCTTGAT
droBip1 scf7180000396434:279267-279460 - GGCCAGCAGGCAGCACCTGCCACCGACCTACGTCGACT-TGCAAGTCATAAGTGAGTAAT-CGCCA---AC-C-CCCGGTGTT-----A---------------GCC------TGA-----------------------T----------------------------------------CAGCTCCAGCTCAGAGGTGGAG---------CCGGATCCGGATCCG------------GATCAGCAG-----------CAGTT-------------AA--C------TTTATC-TC-----CTA-TATCCAC--------------------------------------------A-----------ACCCCGAA--------------------ACTT--TCCCC----------------------------------------------------------------------------------------------------AAAAAAAAT---------------------------------------------------ATA-------------TCCTTGAT
droKik1 scf7180000302258:513588-513647 - GGCCAGAGGACGCAACCTGCCATCTAGCTCCGTTGATT-TGAAAGTTATAAGTGAGTAAT-C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453927:175052-175302 - GGTCAGAAGGCAGTACCTGGTTCCAGTCTCCATCGATT-TGCAAGTACTAAGTGAGTAAT-CGCAA---CG-CGTTCGGTTTT-----CTGGGCTTT--C---CGGA------TCT-----------------------C----------------------------------------CGACTC--------------------------------------------------------CGCAGTCAA----AAGGTGTCTTGCCCGGCAAGAAAAGCCCA---GCTCCTCCT-----ATC-TCTCCCC---TGAAAA----AAA-G----------------TACTTCCCATT-----TTCAACAAAACGAAT--GACCCATTCTACAATGAGTTC--ACTCC----------------------------------------------------------------------------------------------------GAAAGAAA----------------------------------------------------GAAATTTGAAC-AAATCCTTTGTT
droEle1 scf7180000491011:689234-689506 - GGCCAGGAGGCAGCAACTGCCCCTCGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCAA---CG-CGTTAGGTTTT-----C-GGGGCCC------GGG-------ACT-----------------------C----------------------------------------CGCCTCCGGCTCAGAGTTGGAG---------TCGGATCC------------GCC----GGTCCGCAGTCAGAAAGAAGATGTCCTGTCCGACA-GCAA--C------CTATCTCCC-----ATC-TCTCCCCC--CGAAAA----AAA-------------------A-CCCCCACC-----------AAAACGAAA--TACCCACTACCCAATGGGTTT--ACACTACATTA----------------------------------------------------------------------------------------------AAAGAA------------------------------------------------------GAAATTTGAAC-AAAATCTTTGCT
droRho1 scf7180000779506:480750-481038 - G-CCAGGGGGCAGCAACTGACCTCCATCGCCATCGACT-TGCAAGTCCTAAGTGAGTAAT-CGCAG---CG-CGTTAGGTTTC-----C-GGGGCCC--C---AGG-------ACT-----------------------C----------------------------------------CGACCCCGGCTCAGAGTTGGAG---------TCGGATCC------------GGC----GGTCCGCAGTCAG----AAGATGTCCTGTGCGACAAGCAA--C------CTATCTCCCATCCTACCCCCCCCCC---CCAAAAAA--AA--G----------------A--ACCCCACC-----------AAAACGAAA--GCTCCACTTCCAAAAGGGCTTGTACCCA----------------------------------------------------------------------------------------------------AAAAAAAAAAAAAAAACAAACA--------------------------------------GAAATTTGAAC-AAAATCTTTGCT
droBia1 scf7180000301760:4792075-4792335 + GGACAGAAGGCAGCCACTGCCGCCCGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCCA---CG-CGTTAGGTTCT-----CTGAGGTCC--C---GGAACCTCGGTCC-----------------------C----------------------------------------CGACTCTGGCTCAGAGGCGGAG---------TCGGATCC------------G-------------------------GATGTCCTGTC--------------------------CC-----ATC-TCTCCCC---CGAAAA--ACGAAACAAAACACATAAA---GTAGCCCCTATC-----------GAAACGAAAAGGACCCACTTCCAAATGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AAAAAATAA---------------------------------------------------AACATTTGAAC-AAAATCTTTGCT
droTak1 scf7180000415151:433477-433792 + GGGCAGCGGGCAGCAACTGCCCCCCGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCAGCAGCA-GGTTAGGTTTC-----TTGAGGCAC--C---GCGATCTGGGTCT-----------------------C----------------------------------------CGACTCCGGCTCAGAGGTGGAG---------TCGGATTCAGATCCAGATCCGCC----GGTTCGCAGTCAG----AAGATGTCCTGTCCGACAAGCAA--C------CCTTCTTCC-----ATC-TCTCCCC---CGACAA--AAGAA---AAACACATTAAGTAGTAGCCCTTGCC-----------AAAACGAAAGAGATCCACTTCCAAATGGGTTT--ACTCAAAAAAAAAAG------------------------------------------------------------------------------------------AAAG--------------------------------------------------------AAAATTTGAAC-AAAATCTTTGCT
droEug1 scf7180000409277:59726-60004 - GGACAGAAGGCAGCAACTGCCAGCCGTCTACATCGACT-TGCAAGTACGACGTAAGTAAT-CGCAA---CG-CGTTAGGTTTT------TGAGGCCA--C---GGGA------TCT-----------------------C----------------------------------------CGACACCGGCTCAGAGCTGGCG---------TCGGATCC------------GCCGTCGGGTCTGCAGTCAG----AAGATGTCCTTTCCGACAATCGA--C------CTTTCTCCC-----ATC-TCTCCCCC--CGAAAA--AAGAA---AAACACATAAA--AGTA-CCCCCACC--------A--AAAATGAAA--AAACCAA-------------------CAAAAAAA----------------------------------------------------------------------------------------------AAAGAAAG----------------------------------------------------GAAATTTATACAAAAAACTTTTAT
dm3 chrX:2374534-2374816 - GGACCGTGGGCAGCAACTGCCCGAAGTGTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCTA---CA-CGTTAGGTTTT-----CTGAGGCAC--C---GGTA------TCT-----------------------C----------------------------------------CGACTCCGGTTTAGAGGTGGAG---------TCGGGTCC------------GCC----GGTTCGCAGTCAG----AAGATGTCGAGTCCGACAAGCCA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAAAGAAAAGAAAAAAA---GAA--AAGAAAC-----------GAAACGAAA--GACCCACTCAAAAATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTT
droSim2 x:2188898-2189162 - dsi_10599 GGACCGTGGGCAGCAACTGCCCGAAGTATCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCCA---CG-CGTTAGGTTTT-----CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGGAG---------TCGGGTCC------------GCC----GGTCCGCAGTCAG----AAGATGTCGAGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAAAGAAAA----------------------------------GAAAAGAAA--GACCCATTCAAGAATGGGCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTT
droSec2 scaffold_10:2146978-2147242 - dse_757 GGACCCTTGGCAGATACTGCCCGAAGTGTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCCA---CG-CGTTAGGTTTT-----CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGGAG---------TCGGGTCC------------GCC----GGTCCGCAGTCAG----AAGATGTCGAGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAAAGAAAA----------------------------------GAAAAGAAA--GACCCATTCAAAAATGGGCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTT
droYak3 X:5970872-5971164 + dya_1337 GGACCGAAGGCAGCAATTGCCCGAAGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCTA---CG-CGTTAGGTTTTGAGGTTTGAGGCCC--CGGCGGAA------TCT-----------------------T----------------------------------------CGACTCCGGCTCAGAGT------CGGTGGAGTTGGATCC------------GCC----GGTCCGCAGTCAG----AAGATGTCGTGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCCCCTTCAAAA----GAA----AACGCATA----AGTA-CCCCCACC-----------AACACGAAA--TGCCCACTCTCAAGTGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGAAAAT---------------------------------------------------CTATTTTGAAC-AAAAGC-TTGTT
droEre2 scaffold_4644:2324039-2324313 - der_338 GGACCGAAGGCAGCAACTGTCCGAAGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCTA---CG-CGTTAGGTTTT-----GTGAGACCC--CTGCGGAA------TCT-----------------------C----------------------------------------CGACTCCGGCTCAGAGGTGGAGTCGGTGGA-----GTCC------------GCC----GGTCCGCAGTCCA----AAGATGTCGTGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAA----AACGCATA----AGTG-ACCCCACC--------C--AAAAAAAAA-------------AAATGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGA-AAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTT
dp5 XL_group3a:2048371-2048439 - TGCGAGTGGGCAGCGTCTGCCTGCCACCGCCGTCGATT-TGCAAGTACACCGTGAGTAAT-CGCCC---CC-TGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_11:2627991-2628058 + TGCAAGTGGGCAGCGTCTCCCTCCCACCGCCGTCGATTCTGCAAGTACACCGTGAGTAATTCGCCC---CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:12083361-12083419 - GATTACCCACAAATATTTGGATCCGACTTACATTAATT-TGCGTGTACAGCGTGAGTAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12928:1366816-1366873 - CAATACCCGACAGCGTGTGCCCTCCACCTACATCGATT-TGCGTGTACAGCGTGAGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:13642354-13642621 + CAACACCGGACAGCGCTTACCGCCCACCTACGTCGATT-TGAGTGTACAGCGTGAGTAAA-CCCTA---GAACGT----------------------------------------------------------------C----------------------------------------TACCTTAA-----------------------------------------------------------------------------------------------------------------------------------AAAG--AAA------------------A--GCCACACTGAACATCC-----TACCAAA--CCAACAAAACAAACAAAAATTAAAA-AAAAAAAAAAAAGAAGAAGATTTATAAAGTAATGAAAAAAATCCCTCTACACATAAACCCCAAACACAACAGATATCTCTCTATTATCTACCCCTATCTCTCTCACACATA---------------------------------------------------CACACACAAAC-ACTCGA-TTCTT
droGri2 scaffold_15203:8365006-8365301 + GAACCTGGGACAGCGTTTGACTCCCACCTCCATCGATT-TGCGTGTACAGCGTGAGTAGA--GCCC---TA-CCCCAAATCCA-----CTCAACACCACC---AATACCCCACTCT-----------------------CCAATACACAAACACACAAACTCACACACACACACACACAAGCCCTTTGGTT--------AT---------------------------------------------GT-------CAGATGTCAGGTCCGACAAATGCAACACAAATATCTCTCTT-----ATC-TCTCTCA------CAC----AACAAAAAA----------------------------------AAAAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------CAAACACAAAAACACAACATGATCCTAAGCTACTACTTTATACGATTCTTTGGTC-AGAGAATTTCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGCCAGCAGGCAGCACCTGCCACCGACCTACGTCGACT-TGCAAGTCATAAGTGAGTAAT-CGCCC---CC-GGG------TT-----A---------------GCC------G--AACGAATCGTCCGGTCCGCCGAT-----------------------------------------CAGCTCCAGCTCAGAGGTGGAG---------CCGGATCC------------G------GATCCGCAGCAGT----AATCTATCTA------------------------------------------TCTCC---CAACAA--AAAAATTCCAATATA--------------TTCCC-----------AAAAAGAAACACTTTCCTTTCC---------------------------------------------------------------------------------------------------------------------AAAAAATAT--------------------------------------CCCTCCCCCATTACTTCTTCGACC-AATATCCTTGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................CGTCCGGTCCGCCGAT-----------------------------------------CAGCTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
.GCCAGCAGGCAGCACCTGCCACCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......................................................................................................................GAATCGTCCGGTCCGCCGAT-----------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................CTACGTCGACT-TGCAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
........................................................................................A---------------GCC------G--AACGAATCGTCCGGTCCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................G--AACGAATCGTCCGGTCCGCCGAT-----------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........AGCACCTGCCACCGACCTACGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--------------------------------------CCCTCCCCCATTACTTCTTCGACC-AAT.........2911.001010000
.......................................................................................................................GAATCGTCCGGTCCGCCGAT-----------------------------------------CAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................CTACGTCGACT-TGCAAGTCATAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................ACGTCGACT-TGCAAGTCATAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................................................................................GATCC------------G------GATCCGCAGCAGT----................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................................................................................AATCTATCTA------------------------------------------TCTCC---CAACA...............................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................AATCGTCCGGTCCGCCGAT-----------------------------------------CAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......................................................................................................................................................................................................................................................................................................................................AATTCCAATATA--------------TTCCC-----------AAAAAG.........................................................................................................................................................................................................................2311.001010000
.....................................................................................................................ACGAATCGTCCGGTCCGCCGAT-----------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................AAAATTCCAATATA--------------TTCCC-----------AAA............................................................................................................................................................................................................................2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCTTCGACC-AATATCCTT...2111.001001000
.................................................................................................................................................................................................GAGGTGGAG---------CCGGATCC------------G------GATCC............................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................TGCAAGTCATAAGTGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
...............................................................................................................................................................................................................................................ATCCGCAGCAGT----AATCTATCTA------------------------------------------TCTCC---C...................................................................................................................................................................................................................................................................................2811.001010000
.....................................................................................................................................................................................AGCTCCAGCTCAGAGGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droBip1
GGCCAGCAGGCAGCACCTGCCACCGACCTACGTCGACT-TGCAAGTCATAAGTGAGTAAT-CGCCA---AC-C-CCCGGTGTT-----A---------------GCC------TGA-----------------------T----------------------------------------CAGCTCCAGCTCAGAGGTGGAG---------CCGGATCCGGATCCG------------GATCAGCAG-----------CAGTT-------------AA--C------TTTATC-TC-----CTA-TATCCAC--------------------------------------------A-----------ACCCCGAA--------------------ACTT--TCCCC----------------------------------------------------------------------------------------------------AAAAAAAAT---------------------------------------------------ATA-------------TCCTTGATSizeHit CountTotal NormTotal
No Reads
droKik1
GGCCAGAGGACGCAACCTGCCATCTAGCTCCGTTGATT-TGAAAGTTATAAGTGAGTAAT-C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGTCAGAAGGCAGTACCTGGTTCCAGTCTCCATCGATT-TGCAAGTACTAAGTGAGTAAT-CGCAA---CG-CGTTCGGTTTT-----CTGGGCTTT--C---CGGA------TCT-----------------------C----------------------------------------CGACTC--------------------------------------------------------CGCAGTCAA----AAGGTGTCTTGCCCGGCAAGAAAAGCCCA---GCTCCTCCT-----ATC-TCTCCCC---TGAAAA----AAA-G----------------TACTTCCCATT-----TTCAACAAAACGAAT--GACCCATTCTACAATGAGTTC--ACTCC----------------------------------------------------------------------------------------------------GAAAGAAA----------------------------------------------------GAAATTTGAAC-AAATCCTTTGTTSizeHit CountTotal NormTotal
No Reads
droEle1
GGCCAGGAGGCAGCAACTGCCCCTCGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCAA---CG-CGTTAGGTTTT-----C-GGGGCCC------GGG-------ACT-----------------------C----------------------------------------CGCCTCCGGCTCAGAGTTGGAG---------TCGGATCC------------GCC----GGTCCGCAGTCAGAAAGAAGATGTCCTGTCCGACA-GCAA--C------CTATCTCCC-----ATC-TCTCCCCC--CGAAAA----AAA-------------------A-CCCCCACC-----------AAAACGAAA--TACCCACTACCCAATGGGTTT--ACACTACATTA----------------------------------------------------------------------------------------------AAAGAA------------------------------------------------------GAAATTTGAAC-AAAATCTTTGCTSizeHit CountTotal NormTotal
No Reads
droRho1
G-CCAGGGGGCAGCAACTGACCTCCATCGCCATCGACT-TGCAAGTCCTAAGTGAGTAAT-CGCAG---CG-CGTTAGGTTTC-----C-GGGGCCC--C---AGG-------ACT-----------------------C----------------------------------------CGACCCCGGCTCAGAGTTGGAG---------TCGGATCC------------GGC----GGTCCGCAGTCAG----AAGATGTCCTGTGCGACAAGCAA--C------CTATCTCCCATCCTACCCCCCCCCC---CCAAAAAA--AA--G----------------A--ACCCCACC-----------AAAACGAAA--GCTCCACTTCCAAAAGGGCTTGTACCCA----------------------------------------------------------------------------------------------------AAAAAAAAAAAAAAAACAAACA--------------------------------------GAAATTTGAAC-AAAATCTTTGCTSizeHit CountTotal NormTotal
No Reads
droBia1
GGACAGAAGGCAGCCACTGCCGCCCGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCCA---CG-CGTTAGGTTCT-----CTGAGGTCC--C---GGAACCTCGGTCC-----------------------C----------------------------------------CGACTCTGGCTCAGAGGCGGAG---------TCGGATCC------------G-------------------------GATGTCCTGTC--------------------------CC-----ATC-TCTCCCC---CGAAAA--ACGAAACAAAACACATAAA---GTAGCCCCTATC-----------GAAACGAAAAGGACCCACTTCCAAATGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AAAAAATAA---------------------------------------------------AACATTTGAAC-AAAATCTTTGCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGGCAGCGGGCAGCAACTGCCCCCCGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCAGCAGCA-GGTTAGGTTTC-----TTGAGGCAC--C---GCGATCTGGGTCT-----------------------C----------------------------------------CGACTCCGGCTCAGAGGTGGAG---------TCGGATTCAGATCCAGATCCGCC----GGTTCGCAGTCAG----AAGATGTCCTGTCCGACAAGCAA--C------CCTTCTTCC-----ATC-TCTCCCC---CGACAA--AAGAA---AAACACATTAAGTAGTAGCCCTTGCC-----------AAAACGAAAGAGATCCACTTCCAAATGGGTTT--ACTCAAAAAAAAAAG------------------------------------------------------------------------------------------AAAG--------------------------------------------------------AAAATTTGAAC-AAAATCTTTGCTSizeHit CountTotal NormTotal
No Reads
droEug1
GGACAGAAGGCAGCAACTGCCAGCCGTCTACATCGACT-TGCAAGTACGACGTAAGTAAT-CGCAA---CG-CGTTAGGTTTT------TGAGGCCA--C---GGGA------TCT-----------------------C----------------------------------------CGACACCGGCTCAGAGCTGGCG---------TCGGATCC------------GCCGTCGGGTCTGCAGTCAG----AAGATGTCCTTTCCGACAATCGA--C------CTTTCTCCC-----ATC-TCTCCCCC--CGAAAA--AAGAA---AAACACATAAA--AGTA-CCCCCACC--------A--AAAATGAAA--AAACCAA-------------------CAAAAAAA----------------------------------------------------------------------------------------------AAAGAAAG----------------------------------------------------GAAATTTATACAAAAAACTTTTATSizeHit CountTotal NormTotal
No Reads
dm3
GGACCGTGGGCAGCAACTGCCCGAAGTGTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCTA---CA-CGTTAGGTTTT-----CTGAGGCAC--C---GGTA------TCT-----------------------C----------------------------------------CGACTCCGGTTTAGAGGTGGAG---------TCGGGTCC------------GCC----GGTTCGCAGTCAG----AAGATGTCGAGTCCGACAAGCCA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAAAGAAAAGAAAAAAA---GAA--AAGAAAC-----------GAAACGAAA--GACCCACTCAAAAATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..................................................................................................................................................................................................AGGTGGAG---------TCGGGTCC------------GCC----GGTTC............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GATGTCGAGTCCGACAAGCCA--C------CTTA............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAAGTGTCCATCGACT-TGCAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................TGCAAGTACTAAGTGAGTAAT-CGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................GGCAC--C---GGTA------TCT-----------------------C----------------------------------------CGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................TCCATCGACT-TGCAAGTACTAAGTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................AATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAG................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCAAAAATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAA..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTT-----CTGAGGCAC--C---GGTA------TCT-----------------------C----------------------------------------CGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................TAAT-CGCTA---CA-CGTTAGGTTTT-----CTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................CT-----------------------C----------------------------------------CGACTCCGGTTTAGAGGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTCGCAGTCAG----AAGATGTCGAGTCCGG................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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..........................................................................................................................................................................................................................................................G----AAGATGTCGAGTCCGACAAGCCA--C------C...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TTTT-----CTGAGGCAC--C---GGTA------TCT-----------------------C----------------------------------------CGACT......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AAACGAAA--GACCCACTCAAAAATGGGCT................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................T-CGCTA---CA-CGTTAGGTTTT-----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................CCACTCAAAAATGGGCTT--ACTT.........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACCCACTCAAAAATGGGCTT--AC...........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TT--ACTTC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTT.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAAGTGTCCATCGACT-TGCAAGTACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAAA.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GCC----GGTTCGCAGTCAG----AAGATGTCGAGA....................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GA........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GTACTAAGTGAGTAAT-CGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAAAAATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCCGAAGTGTCCATCGACT-TGCAAGTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TT-TCGCCCC---TGAAAA----GAAAGAAAA.................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAAAC-----------GAAACGAAA--GACCCACTCAAAAA......................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGCCCGAAGTGTCCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GGTCC------------GCC----GGTTCGCAGTCG.....................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACCCACTCAAAAATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------A...................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCAGCAACTGCCCGAAGTGTCCATCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................C-----ATT-TCGCCCC---TGAAAA----GAAAGAAA..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAAAC-----------GAAACGAAA--GACCCACTCAAAA.......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGCAC--C---GGTA------TCT-----------------------C----------------------------------------CGACT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------AAAGAA..............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CACTCAAAAATGGGCTT--ACTTC----------------------------------------------------------------------------------------------------A...................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCCGGTTTAGAGGTGGAG---------TCGGGTCC------------G.......................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................CGCAGTCAG----AAGATGTCGAGTCCGA................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GATGTCGAGTCCGACAAGC...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATCGACT-TGCAAGTACTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
....CGTGGGCAGCAACTGCCCGAAGTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................TGCAAGTACTAAGTGAGTAAT-C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................A----GAAAGAAAAGAAAAAAA---GAA--AAG..............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GAGTAAT-CGCTA---CA-CGTTAGGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................C----GGTTCGCAGTCAG----AAGAT...........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AAGAAAAGAAAAAAA---GAA--AAG..............................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------CAATTTTGAAC-AAAAGG-.....1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAAGAAAAAAA---GAA--AAGA.............................................................................................................................................................................................................................................1880.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................A----GAAAGAAAAGAAAAAAA---GAT--.................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AAAGAAAAGAAAAAAA---GAA--.................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAAGAAAAAAA---GAA--AAGAAA...........................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAGAAAAAAA---GAA--AAGAA............................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGACCGTGGGCAGCAACTGCCCGAAGTATCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCCA---CG-CGTTAGGTTTT-----CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGGAG---------TCGGGTCC------------GCC----GGTCCGCAGTCAG----AAGATGTCGAGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAAAGAAAA----------------------------------GAAAAGAAA--GACCCATTCAAGAATGGGCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................A------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGA............................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.........................................................................................................................................................................................................................................................................GTCCGACAAGCAA--C------CTTACTTCC-----..................................................................................................................................................................................................................................................................................................2311.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAAT....................2211.00100010000000000000
........................................................................CGTTAGGTTTT-----CTGAGGCCC--C---GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................AGTCAG----AAGATGTCGAGTC...................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............................................................................TTTT-----CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGAATGGGCTT--ACT..........................................................................................................................................................................................1811.00100100000000000000
........................................................................................CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACT......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
.......................................................................................................................................................................................CTCCGGCTTAGAGGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...............ACTGCCCGAAGTATCCATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................TCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-.....2911.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAATGGGCTT--ACTCC----------------------------------------------------------------------------------------------------AAA.................................................................................2211.00100100000000000000
.....................CGAAGTATCCATCGACT-TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.....................................................................................................................................................................................................TGGAG---------TCGGGTCC------------GCC----GGTC.............................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................CATTCAAGAATGGGCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGA...............................................................................2711.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGA...............2711.00100000001000000000
...................................................................................................................................................................................................................................................................................CAA--C------CTTACTTCC-----ATT-TCGCCCC---TG..................................................................................................................................................................................................................................................................................2511.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGAAC-AAAAGG-.....16130.08100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGAAC-AAAAGG-.....15200.05100000010000000000
droSec2
GGACCCTTGGCAGATACTGCCCGAAGTGTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCCA---CG-CGTTAGGTTTT-----CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGGAG---------TCGGGTCC------------GCC----GGTCCGCAGTCAG----AAGATGTCGAGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAAAGAAAA----------------------------------GAAAAGAAA--GACCCATTCAAAAATGGGCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........AGATACTGCCCGAAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18223.004601450
..........CAGATACTGCCCGAAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.5030030
......TTGGCAGATACTGCCCGAAGTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020110
..........................................................................................................................................................................................................................................................G----AAGATGTCGAGTCCGACAA.............................................................................................................................................................................................................................................................................................................................2021.0020020
........................................................................................................................................................................................................................................................CAG----AAGATGTCGAGTCCGACA..............................................................................................................................................................................................................................................................................................................................2121.0020020
.................TGCCCGAAGTGTCCATCGACT-TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020020
...........................GTCCATCGACT-TGCAAGTACTAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
.GACCCTTGGCAGATACTGCCCGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010010
.GACCCTTGGCAGATACTGCCCGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
.............ATACTGCCCGAAGTGTCCATCGACT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010001
...........AGATACTGCCCGAAGTGTCCATCGACT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010010
......TTGGCAGATACTGCCCGAAGTGTCCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010010
.......................................................................................................................................................................................CTCCGGCTTAGAGGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
.........................................................................................................AA------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010
..............................CATCGACT-TGCAAGTACTAAGTGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010010
.......................................................................................................................................................................................................................GTCC------------GCC----GGTCCGCAGTCAG----................................................................................................................................................................................................................................................................................................................................................2020.5010010
..............................................................................................................................................................................................TTAGAGGTGGAG---------TCGGGT......................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
..................................................................................................................................................................................................................................................CGCAGTCAG----AAGATGTCGAGTCCGACAA.............................................................................................................................................................................................................................................................................................................................2820.5010010
.........................................................................................................................................................................................CCGGCTTAGAGGTGGAG---------T...........................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
....................................................................................................................................................................................CGACTCCGGCTTAGAGGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
..........................................................................................................A------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
.GACCCTTGGCAGATACTGCCCGAAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010010
....CCTTGGCAGATACTGCCCGAAGTGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010010
................................................................................TTT-----CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010010
......................................................AGTAAT-CGCCA---CG-CGTTAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
.......TGGCAGATACTGCCCGAAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010010
.GACCCTTGGCAGATACTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
........................................................................................CTGAGGCCC--C---GGAA------TCT-----------------------C----------------------------------------CGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010
........................AGTGTCCATCGACT-TGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
........................................................................................................................................................................................................................................................CAG----AAGATGTCGAGTCCGACAAGC...........................................................................................................................................................................................................................................................................................................................2420.5010010
................................................................................................................................................................................................AGAGGTGGAG---------TCGGGTCC------------GCC----.................................................................................................................................................................................................................................................................................................................................................................2120.5010010
..........................................................................................................................................................................................................................................................G----AAGATGTCGAGTCCGACAAG............................................................................................................................................................................................................................................................................................................................2120.5010010
..........................................AAGTACTAAGTGAGTAAT-CGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
..................................................................................................................CT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100
...........AGATACTGCCCGAAGTGTCCATCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
..........................................................................................................A------TCT-----------------------C----------------------------------------CGACTCCGGCTTAGAGGTGGAG---------T...........................................................................................................................................................................................................................................................................................................................................................................................2820.5010010
................................TCGACT-TGCAAGTACTAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------------------------------CAATTTTGAAC-AAAAGC-T....2030.3310010
.................................................................................................................................................................................................................................................................................................................TCGCCCC---TGAAAA----GAAAGA....................................................................................................................................................................................................................................................................1930.3310010
.........................................................................................................................................................................................................................................................................................................................................GAAAA----------------------------------GAAAAGAAA--GACCCATT............................................................................................................................................................................................................2230.3310100
............................................................................................................................................................................................................................................................................................................................................................................................................GCTT--ACTCC----------------------------------------------------------------------------------------------------AAAGAAAAT---------------------------------------------------C.......................1930.3310010
droYak3
GGACCGAAGGCAGCAATTGCCCGAAGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCTA---CG-CGTTAGGTTTTGAGGTTTGAGGCCC--CGGCGGAA------TCT-----------------------T----------------------------------------CGACTCCGGCTCAGAGT------CGGTGGAGTTGGATCC------------GCC----GGTCCGCAGTCAG----AAGATGTCGTGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCCCCTTCAAAA----GAA----AACGCATA----AGTA-CCCCCACC-----------AACACGAAA--TGCCCACTCTCAAGTGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGAAAAT---------------------------------------------------CTATTTTGAAC-AAAAGC-TTGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................CC------------GCC----GGTCCGCAGTCAG----AAGATGTCGT......................................................................................................................................................................................................................................................................................................................................28116.0016000000000016
.............................................................................................................................................................................................................GTGGAGTTGGATCC------------GCC----GGTCCGC..........................................................................................................................................................................................................................................................................................................................................................2412.00200110000000
...................................................................................................................................................................................................GT------CGGTGGAGTTGGATCC------------GC......................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..............................................................................................................................................................................................................................................GGTCCGCAGTCAG----AAGATGTCGTGTCC..................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.................................CGACT-TGCAAGTACTAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................CTA---CG-CGTTAGGTTTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................................................AGTCAG----AAGATGTCGTGTCCGAC...............................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................................................................................................CGGAA------TCT-----------------------T----------------------------------------CGACTCCGGCTCAGA............................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................AA------TCT-----------------------T----------------------------------------CGACTCCGGCTCAGAGT------CG..................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.......................................................................................................................................................................................................................................................................GTGTCCGACAAGCAA--C------CTTAC...........................................................................................................................................................................................................................................................................................................2111.00101000000000
......................................................................................GTTTGAGGCCC--CGGCGGAA------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.......................................................................................................GGAA------TCT-----------------------T----------------------------------------CGACTCCGGCTCAGAGT------CG..................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
...........AGCAATTGCCCGAAGTCTCCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000
...........................................................................................................................................................................................................................................................................................................................TCAAAA----GAA----AACGCATA----AGT....................................................................................................................................................................................................................................................2011.00100100000000
GGACCGAAGGCAGCAATTGCCCGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
........GGCAGCAATTGCCCGAAGTCTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................................................................................................................................................................................................................GATCC------------GCC----GGTCCGCAGTCAG----AAGATGTC........................................................................................................................................................................................................................................................................................................................................2911.00110000000000
GGACCGAAGGCAGCAATTGCCCGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
......................................................................................................CGGAA------TCT-----------------------T----------------------------------------CGACTCCGGCTCAGAGT------CG..................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................GTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGAAAAT---------------------------------------------------CT......................2011.00100100000000
.........................................................................................................................................................................................................................CC------------GCC----GGTCCGCAGTCAG----AA..............................................................................................................................................................................................................................................................................................................................................2011.00100010000000
droEre2
GGACCGAAGGCAGCAACTGTCCGAAGTCTCCATCGACT-TGCAAGTACTAAGTGAGTAAT-CGCTA---CG-CGTTAGGTTTT-----GTGAGACCC--CTGCGGAA------TCT-----------------------C----------------------------------------CGACTCCGGCTCAGAGGTGGAGTCGGTGGA-----GTCC------------GCC----GGTCCGCAGTCCA----AAGATGTCGTGTCCGACAAGCAA--C------CTTACTTCC-----ATT-TCGCCCC---TGAAAA----GAA----AACGCATA----AGTG-ACCCCACC--------C--AAAAAAAAA-------------AAATGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGA-AAT---------------------------------------------------CAATTTTGAAC-AAAAGC-TTGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................CCGGCTCAGAGGTGGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000
.........................................................................GTTAGGTTTT-----GTGAGACCC--CTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
......................................................................................................................................................................................................................................................GTCCA----AAGATGTCGTGTCCGA................................................................................................................................................................................................................................................................................................................................2112.0021100000
...............................................................................................................................................................................................................................................GTCCGCAGTCCA----AAGATGTCGTGT....................................................................................................................................................................................................................................................................................................................................2411.0010001000
............GCAACTGTCCGAAGTCTCCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....................................................................................................................................................................................................GTGGAGTCGGTGGA-----GTCC------------GCC----GGTCCC...........................................................................................................................................................................................................................................................................................................................................................2711.0010001000
..................GTCCGAAGTCTCCATCGACT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
........................................................................................................................................................................................................................TCC------------GCC----GGTCCGCAGTCCA----AAGATG..........................................................................................................................................................................................................................................................................................................................................2511.0010000001
..........................................................................................................A------TCT-----------------------C----------------------------------------CGACTCCGGCTCAGA............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.....................................................................CG-CGTTAGGTTTT-----GTGAGACCC--CTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGA-AAT---------------------------------------------------C.......................2211.0010100000
...CCGAAGGCAGCAACTGTCCGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
...........AGCAACTGTCCGAAGTCTCCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...............................................................................................................................................................................................................................................GTCCGCAGTCCA----AAGATGTCG.......................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........GCAGCAACTGTCCGAAGTCTCCATCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
.................................CGACT-TGCAAGTACTAAGTGAGTAAT-CG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
................................................TAAGTGAGTAAT-CGCTA---CG-CGTTAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.................TGTCCGAAGTCTCCATCGACT-TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
..ACCGAAGGCAGCAACTGTCCGAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAA-------------AAATGGGTTT--ACTCA----------------------------------------------------------------------------------------------------AGAGA-..............................................................................2411.0010100000
............................................GTACTAAGTGAGTAAT-CGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
................................................................................................................................................................................................AGAGGTGGAGTCGGTGGA-----GTCC------------GCC----.................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
............................................................................................................................................................................................................GGTGGA-----GTCC------------GCC----GGTCCGCA.........................................................................................................................................................................................................................................................................................................................................................2111.0010100000
......................................................................................................................................................................................................................................................GTCCA----AAGATGTCGTGTCCGAC...............................................................................................................................................................................................................................................................................................................................2211.0010001000
............GCAACTGTCCGAAGTCTCCATCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...........AGCAACTGTCCGAAGTCTCCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
..........................................................................................GAGACCC--CTGCGGAA------TCT-----------------------C----------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..............................................................................................................................................................................................................................................GGTCCGCAGTCCA----AAGATGTC........................................................................................................................................................................................................................................................................................................................................2111.0010001000
dp5
TGCGAGTGGGCAGCGTCTGCCTGCCACCGCCGTCGATT-TGCAAGTACACCGTGAGTAAT-CGCCC---CC-TGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................CACCGCCGTCGATT-TGCAAGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
....AGTGGGCAGCGTCTGCCTGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
.....................................T-TGCAAGTACACCGTGAGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
droPer2
TGCAAGTGGGCAGCGTCTCCCTCCCACCGCCGTCGATTCTGCAAGTACACCGTGAGTAATTCGCCC---CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GATTACCCACAAATATTTGGATCCGACTTACATTAATT-TGCGTGTACAGCGTGAGTAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............ATTTGGATCCGACTTACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300030
......................CCGACTTACATTAATT-TGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........ACAAATATTTGGATCCGACTTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
GATTACCCACAAATATTTGGATCCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................................TGCGTGTACAGCGTGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..............ATTTGGATCCGACTTACATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................ATTAATT-TGCGTGTACAGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
GATTACCCACAAATATTTGGATCCGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
........................GACTTACATTAATT-TGCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
CAATACCCGACAGCGTGTGCCCTCCACCTACATCGATT-TGCGTGTACAGCGTGAGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......CGACAGCGTGTGCCCTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
............GCGTGTGCCCTCCACCTACATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.......CGACAGCGTGTGCCCTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.......................CCACCTACATCGATT-TGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
........................CACCTACATCGATT-TGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
............................TACATCGATT-TGCGTGTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
CAACACCGGACAGCGCTTACCGCCCACCTACGTCGATT-TGAGTGTACAGCGTGAGTAAA-CCCTA---GAACGT----------------------------------------------------------------C----------------------------------------TACCTTAA-----------------------------------------------------------------------------------------------------------------------------------AAAG--AAA------------------A--GCCACACTGAACATCC-----TACCAAA--CCAACAAAACAAACAAAAATTAAAA-AAAAAAAAAAAAGAAGAAGATTTATAAAGTAATGAAAAAAATCCCTCTACACATAAACCCCAAACACAACAGATATCTCTCTATTATCTACCCCTATCTCTCTCACACATA---------------------------------------------------CACACACAAAC-ACTCGA-TTCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................GTGAGTAAA-CCCTA---GAACGT----------------------------------------------------------------C----------------------------------------TACCT......................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
........................CACCTACGTCGATT-TGAGTGTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.......................CCACCTACGTCGATT-TGAGTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
............GCGCTTACCGCCCACCTACGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
GAACCTGGGACAGCGTTTGACTCCCACCTCCATCGATT-TGCGTGTACAGCGTGAGTAGA--GCCC---TA-CCCCAAATCCA-----CTCAACACCACC---AATACCCCACTCT-----------------------CCAATACACAAACACACAAACTCACACACACACACACACAAGCCCTTTGGTT--------AT---------------------------------------------GT-------CAGATGTCAGGTCCGACAAATGCAACACAAATATCTCTCTT-----ATC-TCTCTCA------CAC----AACAAAAAA----------------------------------AAAAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------CAAACACAAAAACACAACATGATCCTAAGCTACTACTTTATACGATTCTTTGGTC-AGAGAATTTCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................AAATCCA-----CTCAACACCACC---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220
.................................................GCGTGAGTAGA--GCCC---TA-C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220
..........................................GTGTACAGCGTGAGTAGA--GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
............................................................................................................................................................................................GTT--------AT---------------------------------------------GT-------CAGATGTCAGGT....................................................................................................................................................................................................................................................................................................................................1911.00101
........................................GCGTGTACAGCGTGAGTAGA--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..........................CCTCCATCGATT-TGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATGATCCTAAGCTACT..................................2011.00110
.................................................GCGTGAGTAGA--GCCC---TA-CCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
............................................................................................................................................................................................................................................................................................AATATCTCTCTT-----ATC-TCTCTCA------.................................................................................................................................................................................................................................................................................2211.00101
..................................................................................A-----CTCAACACCACC---AATACCCCACTCT-----------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
............GCGTTTGACTCCCACCTCCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
......GGGACAGCGTTTGACTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
...............................................................................................................ACTCT-----------------------CCAATACACAAACACACAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGGTC-AGAGAATTTC..2011.00110
.............................................................................AATCCA-----CTCAACACCACC---AATACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...................ACTCCCACCTCCATCGATT-TGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATTCTTTGGTC-AGA.........1911.00110
..............................................ACAGCGTGAGTAGA--GCCC---TA-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGATCCTAAGCTACTACTTTATA..........................2611.00101
............................................................................................................................................................................ACACACAAGCCCTTTGGTT--------AT---------------------------------------------G........................................................................................................................................................................................................................................................................................................................................................2211.00110
...............TTTGACTCCCACCTCCATCGATT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..................................................................................................................................................................................................................................................................ATGTCAGGTCCGACAAATGCAACA.....................................................................................................................................................................................................................................................................................................................2411.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACAAAAACACAACATGATC............................................2211.00110
.........................................CGTGTACAGCGTGAGTAGA--GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
...........................................................................................AACACCACC---AATACCCCACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
...................................................................................................................................................................................................................................................................................................CTCTT-----ATC-TCTCTCA------CAC----AACAAAA...................................................................................................................................................................................................................................................................2511.00110
......................................................AGTAGA--GCCC---TA-CCCCAAATCCA-----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGATCCTAAGCTACTACTTTAT...........................2511.00101
............................TCCATCGATT-TGCGTGTACAGCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
.......................CCACCTCCATCGATT-TGCGTGTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
............................................................................................ACACCACC---AATACCCCACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................ATT-TGCGTGTACAGCGTGAGTAGA--GCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
.......................................................................................................................................................................................................AT---------------------------------------------GT-------CAGATGTCAGGTCCGACAAATGC.........................................................................................................................................................................................................................................................................................................................2711.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGATCCTAAGCTACTACT...............................2111.00101
.....................................T-TGCGTGTACAGCGTGAGTAGA--GCCC---T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
.......................................................................................................AATACCCCACTCT-----------------------CCAATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
........................................................................................................................................................................................TTTGGTT--------AT---------------------------------------------GT-------CAGATGTCAGGTCC..................................................................................................................................................................................................................................................................................................................................2511.00110
..................................................................................................................................................................................................................................................................................ATGCAACACAAATATCTCT..........................................................................................................................................................................................................................................................................................................1911.00110
...................ACTCCCACCTCCATCGATT-TGCGTGTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101
...CCTGGGACAGCGTTTGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.....................................................................................................................................................................................................................................................................TCAGGTCCGACAAATGCA........................................................................................................................................................................................................................................................................................................................1811.00110
.....................................................GAGTAGA--GCCC---TA-CCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.....................................T-TGCGTGTACAGCGTGAGTAGA--GCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
................................................................................................................CTCT-----------------------CCAATACACAAACACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATTCTTTGGTC-AGAGA.......2111.00110
............................................................................AAATCCA-----CTCAACACCACC---AATACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
.............................CCATCGATT-TGCGTGTACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.................................................GCGTGAGTAGA--GCCC---TA-CCCCAAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
...................................................GTGAGTAGA--GCCC---TA-CCCCAAATCCA-----CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATTCTTTGGTC-AGAGAATT....2311.00101
.......................................................................................................................................................................................................AT---------------------------------------------GT-------CAGATGTCAGGTCCGA................................................................................................................................................................................................................................................................................................................................2011.00110
..........................................................................CCAAATCCA-----CTCAACACCACC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
............................................................................................................................................................................................GTT--------AT---------------------------------------------GT-------CAGATGTCAGGTCC..................................................................................................................................................................................................................................................................................................................................2111.00101
.............................................................................................................................................AATACACAAACACACAAACTCACACACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110
................................................AGCGTGAGTAGA--GCCC---TA-CCCCAAATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101
...........................................................................................................................................................................................GGTT--------AT---------------------------------------------GT-------CAGATGTCAGGT....................................................................................................................................................................................................................................................................................................................................2011.00101
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATTCTTTGGTC-AGAGAATTTC..2511.00110
.................................................................................................................................................................................................................................................................GATGTCAGGTCCGACAAATGCAACACG...................................................................................................................................................................................................................................................................................................................2711.00110
.................................................................................................................................................................................CAAGCCCTTTGGTT--------AT---------------------------------------------GT-------................................................................................................................................................................................................................................................................................................................................................1811.00110
.AACCTGGGACAGCGTTTGACTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
............................................................................AAATCCA-----CTCAACACCACC---AATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.........................ACCTCCATCGATT-TGCGTGTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
................TTGACTCCCACCTCCATCGATT-TGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
............................................GTACAGCGTGAGTAGA--GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/17/2015 at 11:17 PM