ID:

dan_805

 Coordinate:

scaffold_12929:1878557-1878700 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.9 -15.8 -15.7

Flybase annnotation

exon [dana_GLEANR_6169:2]; CDS [Dana\GF22189-cds]; exon [dana_GLEANR_6169:1]; CDS [Dana\GF22189-cds]; intron [Dana\GF22189-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
TART_DVLINEJockey+
(CAA)nSimple_repeatSimple_repeat+
mature
  1. scaffold_12911:4375725-4375746 -
  2. scaffold_12929:553827-553848 -
  3. dan_805  scaffold_12929:1878669-1878690 +
  4. scaffold_12929:2856363-2856384 +
  5. scaffold_12943:2810826-2810847 -
  6. scaffold_13047:1287799-1287820 -
  7. scaffold_13117:4522638-4522659 -
  8. scaffold_13248:506113-506134 -
  9. scaffold_13248:1075203-1075224 -
  10. scaffold_13248:1342260-1342281 -
  11. scaffold_13248:2748324-2748345 -
  12. scaffold_13248:3479038-3479059 -
  13. scaffold_13334:174030-174051 +
  14. scaffold_13335:159958-159979 -
  15. scaffold_13337:1326069-1326090 -
  16. scaffold_13337:9610397-9610418 -
  17. scaffold_13337:9671700-9671721 -
  18. scaffold_13337:19380637-19380658 +
  19. scaffold_13340:19804233-19804254 -
  20. scaffold_13340:21198363-21198384 -
star

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCAACAGCAGCAACAGCAGCAACATCAATAGATGTTGCAGATGCAACATCAGAAGCAGCAGCAACATCGGTGGATAACAACTGCCTGTGCGAGAGATCTTCAGGAGTTAGTGGAGGAGGTACTGGAGGATTACAAAATGGTCACAATGGGCAACACAACAACAATAACAACAACAACAACAACAATCATGGCAGTGGCAACAACAACAACAATAGTCACTCGAATGATGATGAACGAAATGATG
**************************************************....((....))...(((....))).....(((((.(((.......(((((((..................))))))).........((.(((...))).))..................................))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 V055
head
 M044
female body
 M058
embryo
 V039
embryo
.........................................................................................................GTTAGTGGAGGAGGTGATG........................................................................................................................ 19 2 2 1.00 2 2 0 0 0 0
..................................................................................................................TGAGGTACGGGAGGGTTACA.............................................................................................................. 20 3 4 0.25 1 0 1 0 0 0
.......................................................................................................GGGTTAGTGGAGGAGGTGATGG....................................................................................................................... 22 3 4 0.25 1 1 0 0 0 0
......................................................................................................TGGGTTAGTGGAGGAGGT............................................................................................................................ 18 2 10 0.20 2 1 0 1 0 0
...............................................................................................................................................................................................................................ATGATGGTGAACGAAAGG... 18 2 7 0.14 1 0 1 0 0 0
...............................................................................................................................................................................................................................ATGATGTTGAACGAAATG... 18 1 8 0.13 1 0 1 0 0 0
.......................................................................................................................................AATGGTCACAATGGGCGATG......................................................................................... 20 3 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................................................ATGATGTTGAACGAAATGGT. 20 2 9 0.11 1 0 1 0 0 0
......................................................................................................GGAGTTATTGGTGGAGGT............................................................................................................................ 18 2 12 0.08 1 0 1 0 0 0
.........................................TGCAACATCGGATGCGGCAGC...................................................................................................................................................................................... 21 3 14 0.07 1 0 0 1 0 0
......................................................................................................................................................GAACACAAGAACAATAACACC......................................................................... 21 3 16 0.06 1 0 0 0 1 0
..................................................................................................................................................................AATAACAACAACAACAACAACA............................................................ 22 0 20 0.05 1 0 0 0 1 0
...........................................................................................................TAGTGGAGGAGGTGATGG....................................................................................................................... 18 2 20 0.05 1 0 0 1 0 0
............................AAGATGTTGCAGTTGAAACAT................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 1
........................................................................................................GGTTAGTGGAGGAGGTGATG........................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CGTTGTCGTCGTTGTCGTCGTTGTAGTTATCTACAACGTCTACGTTGTAGTCTTCGTCGTCGTTGTAGCCACCTATTGTTGACGGACACGCTCTCTAGAAGTCCTCAATCACCTCCTCCATGACCTCCTAATGTTTTACCAGTGTTACCCGTTGTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTAGTACCGTCACCGTTGTTGTTGTTGTTATCAGTGAGCTTACTACTACTTGCTTTACTAC
**************************************************....((....))...(((....))).....(((((.(((.......(((((((..................))))))).........((.(((...))).))..................................))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 M044
female body
 V055
head
.......................................CTAAGTTGAAGTCTTCATCGTCG...................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0
..........................................................CTCGCTGTAGCCACCTATTGCT.................................................................................................................................................................... 22 3 1 1.00 1 1 0 0
......................................TCTAAGTTGTGGTCTTCG............................................................................................................................................................................................ 18 2 15 0.07 1 1 0 0
................................................................................................................................................................................................................TGGTATCAGTCAGCTTGCT................. 19 3 18 0.06 1 0 0 1
..........................................................................................................................................................TGTTGTTGTTATTGTTGTGG...................................................................... 20 1 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12929:1878507-1878750 + dan_805 GCAACAGCAGCAACAGCAGCA-------------------------ACA-----TCAATAGAT------G---------------------------------------------------TTGC-AGATGCAACATC----------------------------------------------AGAAGCAGCAGCA-------ACATC------------GG----------------------------------------------------------------------------------------------------------TGGATAACAACTGCCTGTGCGAGAGATCTTCAGG---AGTTAGTGGAGGAGGTACTGGAGGATTACAAAATGGT----CACAATGGGCAACACAACAACAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACA----------------ACAAC---------------------------AACAATCATG----------G-CAGTGGCAACA----------------ACAACAACAATA-------------------------------GTCACTCGAATGATGATG---------AAC------------------------------------------------GAAATG-------------------------------ATG
droBip1 scf7180000396543:339213-339443 + -CAGCGGCAGCAGCAACATCT-------------------------GTA-----GATG---------------------------------------------------------------TTGC-AGATGCAACATCAGCAGCAGCAGC----------------------------------AGGAGCAGGAGCA-------ACATC------------GG----------------------------------------------------------------------------------------------------------TGGATAATAACTGCCTTTGCGAGAGATCATCTGG---AGTTAGTGGCGGTAATGGAGGAGGATTATTAAATGGT----CACAATGGGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA------------CAACA------ACAACAATCATAGCAGT------------------------------------------------------------------AACAACA----------------ACAACAACAATA-------------------------------GTCATTCA---AATGATG---------ACA------------------------------------------------ACAACA-------------------------------ATG
droKik1 scf7180000302469:613631-613860 - GCAGCAGCAGCAGCAACGACA-------------------------GCA-----GCAACAGCA------GCA---------------------------------------------------GC-AGCAGCAACAGC----------------------------------------------AGCAGCAGCAGCA-------ACAACAAAGAGTAACCCAGCA-------------------------------------------------GCGTAA---T---AACCACCGAAATCACCACCGACGTC---------------------------------------G---TCATCTGGCGGAT---------------ATGGATGATGATGAAGATGAGGAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT------------C----AGCAAAGGCAGCAAGTTTTGCAACAGCAACAACAACA---ACAGCA----------------------------------------------------------------------------------GCAACATCATC----ATC---------ACC------------------------------------------------ACAATC-------------------------------ATC
droFic1 scf7180000453982:93410-93648 + ACACCAGCAGCAGCAGCAGCA-------------------------GCA-----AAACCAGCA------GCA---------------------------------------------------GC-AGCATCAGCACC------AGCACCAGCAGCAACATCAGTTGCT----------------------GCAGCA-------ACAAC------------AA------------------------------------------------------------------CA------------------------------------GA-------------------------------------------------------------------------------------------------------CA--GCA-ACAACGACCA-----CAACGAAGCGGCGAAATGCT--------GAG------------------------------------------------------T-----------CCTCTGCC------AACAATAACAACA-------------ATTCCAGCAC-------------------------------------------AAACAACAACAAC---------------------------AATAACACCA----------C-AACGAATAACA----------------AC-----------------AACAACA--------AT-A-----CGACAACGAACAACAACA---------ACA------------------------------------------------CAAATA-------------------------------ATA
droEle1 scf7180000491280:234958-235201 - GCAGCAGCAGCAATCGCAGCA-------------------------GCCGACTGTCAATGGCA------GCG----------------------------------------------------------GCAGCGCCAGCAGCAGCACC----------------------------------AACAACAATAACA-------ACAACTCCA---------------------------------------TGCTACCGCCCGCTGTCCAGCAGAACAACAAC---AACAA-------------CAACGAA-----------------------------------------------------------------------------------------------------------------AATAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCAGCAGCAGCAAC----------------ACGAACA------------------------GCAGCAATAGC-AG-C------AACA----------------AC---AGCAACA-----------ATGCGAATGCG-----GGCAGCAATAACAACAATAATAACAATAATAATA---T------CAAC----------------------------------TATATG-------------------------------GCT
droRho1 scf7180000779467:24453-24697 - ACAACAGCAGCAGCAGCAGCA-------------------------ACA-----CCAGCAACA------GCA---------------------------------------------------AC-AGCAGCAACATC----------------------------------------------------AGCAGCAGCAACAC-------------ACACCGAATACGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-----CATCGAG---------TGCG--------GGATCTTCGGCTACGATGACCAGCCAGGTGATGTCGCCGCAGAGTCCGCTGGGCAGCT-----------CCTCCGCTGGCAATCAGGCTAACAA-------------------------CAA------------TAACA------ACAACAATAATAGTAGC----------------ACCAACA------------------------AC--------------A------------------AT----------AATAA--CAAC---AATAAT-----------------------------AATGAGG---------AGC------------------------------------------------AAGTTA-------------------------------AAC
droBia1 scf7180000302126:2974468-2974710 - GCAACAACAGCCACAGCAACAACGGGAATGGTTTGAACAA------AAA-----ACAACAGCA------ACAGCAACA------------------------------------ACGGGAGTAAT-ATGAAC------------AGTACC----------------------------------AACAGCGACAGCA-------ACAAC------------AGTATG------------------------------------------------AACACTAAC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAA-----CAACAG--------------TATGAACA------------------------------------------------------------------------------CTAACAACAGCAACAACA-------------GTATGAACAC-------------------------------------------TAACAACAGCAAC---------------------------AACAGTAAGA----------A-CACTAACAACA----------------GCAACAACAGCA-------------------------------TGAACACTAACAACAGCA---------ACA-------------------------------------------------ACAGT-------------------------------ATG
droTak1 scf7180000415313:163676-163922 - TTAAACGCCTCCAAAGCAGCA-------------------------GCA-----GCAACAGA---------------------------------------------------------TGTTGCTGGTGGCAATAGC------AATACA----------------------------------AACAGCAACAGCAACAGCAA-------------ACCCAGTACAAGCTCACGAGATAAACTAAGCGAATTGCCGTTGCCCGCTGTTGACAA---------C---AACCA-------------CCACATC-----------------------------------------------------------------------------------------------------------------ATCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACAACAATAAT----------------ACAAATA------------------------ATAATAATAAT--------AATAGCA----------------AC---AA--------C---AACAACA--------ACCACCACAGTGATAATAGTATTAGTG---------AGA------------------------------------------------ATAATT-------------------------------ATG
droEug1 scf7180000409462:1408741-1408966 - TTAACAGCCTCCAAAGCAGCA-------------------------GCA-----GCAACAGA---------------------------------------------------------TGTTACTAGCAGCAACATC----------------------------------------------AACAGCAACAACAACAGCAA-------------ACCCAGTACAAGTACAAGAGATAAACTAAGTGAGTTGCCGCTGCCGACTGCTGACAA---------C---ACCAA-------------CCACATC-----------------------------------------------------------------------------------------------------------------ATCAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAACAACAAT----------------ACAAATA------------------------AT--------------AATAAT---------------------------------------AACAACA--------ACCACCACAGTGATAATAGTATTAGTG---------AGA------------------------------------------------ATAATT-------------------------------ATG
dm3 chr3L:14017868-14018096 - GCAGCAGCAGCAGATTATACC-------------------ACAACAGCA-----GCAACAGCA------GAG------------------------------------------------GATGC-AAATGCAGCAGCAGCCGCAGC---------------------AGATTGT-----TGTT-----AACCAGCA-------AATACTCAGTGATCCACAGCGCT------------------------------------------------TGCAG---TACCTACA----------------ACAACAGCAGTTAATGCAAA--------------------------------------------------------------------------------------------------AACAGCA------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGCA----------------------------------------GCA------ACAACAGCAACA----------------AC------------------------AACA---ACAGCA----------G-CAGCAGCAGCA----------------ACAACAACAACA-------------------------------GCTAGTG------GGACA---------ACA---------------------------------------------------ACA---------------------------------A
droSim2 2r:7813485-7813722 + TTAACAGCCTCTAAAGCGGCA-------------------------GCA-----ACAGCAGCA------GCA------------------------------------------ACAGATGCTGCTAGTGGCAAC----------------------------------------------------AGCAACAGCAGCAGCAA-------------ACCCAGCACGAGCACACGAGATAAGCTAGGCGAGGTGCCGCTGCCGACTGTTGACAGCAACCA----------------------------CATC-----------------------------------------------------------------------------------------------------------------ATCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAATAATAAT----AACAATAACAACACAAATA------------------------AT--------------AATAAC---------------------------------------AACAACA--------ACCACCACAGTGATAATAGTATTAGTG---------AGA------------------------------------------------ATAGTT-------------------------------ATG
droSec2 scaffold_1:4665012-4665261 + GCACCAGCATCAGCAACTGCA-------------------------ACA-----GCAACAGAT------GCA---ACATTAACAGCCTCTAAAGCTGCAGCAACAGCAGCAGCAACAGATTCTGCTAGTGGCAAC----------------------------------------------------AGCAACAGCAGCAGCAA-------------ACCCAGCACAAGCACACGAGATAAGCTAGGCGAGGTGCCGCTGCCGACTGTTGACAGCAACCA----------------------------CATC-----------------------------------------------------------------------------------------------------------------ATCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAATAATAAT----AACAATAACAACACAAATA------------------------ATA-----------------A------------------------------------C---AACAACA--------ACC---------------------------------ACC------------------------------------------------ACAGTG-------------------------------ATA
droYak3 3R:17648232-17648468 - GCAACAGCAGCAGCAGCAGCA-------------------------ACA-----ACTCCAGG-----------------------------------------------------------CCAC-TGCTGCCATGTC-----------C----------------------------------GGTAGCGATAGCA------C-------------ACCTGA----------------------------------------------------------------------------------------------------------TGGATCGCC-CTCCAAGTCCTCCAAGTCGTCCA----AGT--------------------------------------------------------------------------------------CGTCGAAGCAGCGA-ATGCG--------GCG------------------------------------------------------TGCCA------------GCCGAGACCCGCAGCAACTGCA----------------------------------------GCA------GCAACAGCAACA-------------GCAGC---------------------------A---ACAGCA----------G-CA------------------GCATGCAG-----------CAAC---ATCAATA--------ACCAGCA--GCC--AGCGGAAGCAGGC---------AGA------------------------------------------------ATCAAA-------------------------------TTT
droEre2 scaffold_4690:17013389-17013615 + ACAACAGCAGCACCAGCAGCA-------------------------ACA-----GCAGCAGCA------ACA-------------------------------------------------------GCAGCAACATCAGT---T---------------------GTTGC-------------AACAGCAGCAGCA-------GCAGC------------AA------------------------------------------------------------------CA------------------------------------GA-------------------------------------------------------------------------------------------------------CA--GCA-ACAACGACCA-----CAACGAAGCGGCGGAATGCT--------GAG------------------------------------------------------T-----------CCTCTGCCAGCAACAACAATAACAACA-------------ATACCAGCAC-------------------------------------------CACCAACAACAAC---------------------------AATACCAGCA----------A-TAACAACAACA----------------ACAACAACAACA-------------------------------GCACCAC------GAACA---------ACA------------------------------------------------ACAATA-------------------------------ATA
dp5 2:6797357-6797596 + GCAACAGCAGCAGCAGAAGCA-------------------------GCC-----GCAGCAGCA------GCA------------------------------------------------GGTGC-AGCAGCAACATCAGC---AGCA------------------GCAGGTACAGCAGC----A------ACAGCA-------------------------G------------------------------------------------------------CAACAACA----------------GCAGCAGCAGCAACTGCAGC--------------------------------------------------------------------------------------------------AGCAGCA------------------------------------------------------------------------------------------------------------------------------------ACTGCAGCAGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---ACAGCA---GCAGCA-A-CATCA---GCA----------------GC----------------------------------------AGCAACATCAGCAACAGCAACAGCAACAACA---G------CAGCTGC----------------------------------AGCCCCCACCAAGACCCCCAATGACGCTCAGTGACAT
droPer2 scaffold_1:9204492-9204720 + GCAGCAGCAGCAGCAGCAGCA-------------------------GCA-----GTGAAAGAAATACCAACAGCAGCA-------------------------------------------------ACGGCAGAG------------------------------GTTGG-------------AACAGCGGCA-TAACA----GCAGCATAA-----C--AGAACC--------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------GCA-GCAGCG-------------------------------------GAG------------------------------------------------------CAGCAGCAG-----------------AGCAGCAGCTGCA----------GAG----------CAG----------------------------------------AGGCAAAAGCAGC---------------------------AGCAGCAGA-----------GCAGC----AGCAGCAGCATAAGCAAAAAG-----------CAGC-----------------------------------------A------GCAA---CAACAA------CAGCCGAACTTCAAAATCTCGG---------------CTAAACG-------------------------------AGA
droWil2 scf2_1100000003523:1073-1295 + GCAACAACAACAACAGCAGCA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AACAACAGCAGC------AACAAC----------------------------------AACAGCAGCAGCA-------ACAAC------------AGCATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------TGGCAGCA------------------------------------------------------------------------------GCAACAACAGCAACATCA---------ACTG----------CAGCAGCAACAGCGAC---------------AGCAG------C----AACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------GC-----------------GA--------------------------CAACAACTGCAGCA---GCAA---CAACAACAGCAGCAACTTC---------------------------------AAC---------------------------------GA
droVir3 scaffold_12970:2215725-2215937 - GCAACAGCAACAACAGCAACA-------------------------ACA-----ACAACAGGT------TTG---------------------------------------------------GC-AGCTGCTTTGGC------AACT------------------------------------------------------------------------------------------------------------TTTGGCCGCTGTCA------------------------------------------------------------------------------CAAAACACA--------------------------------------------AA----CACAAA-------------------TCTTTCGAAT--------------GTCA-----------------------GAA------------------------------------------------------C-----------ATTTTGCA--------CA-GGTCAAGGATACGAACA-GGA----------CAG------------TAGCAACAACAACAACAACAACAAC------------------------------------------------------------------------AACAACAACAACAACATAGAA-----------TTGCGACGACGACA--------AG---T-------------------TG---------CTG------------------------------------------------ATGATG-------------------------------AGC
droMoj3 scaffold_6500:8171235-8171470 - GCAACAGCAGCAACAGCAACA-------------------------GCG-----ACAACAGCA------GCA---------------------------------------------------GC-AACACCAAC----------------------------------------------------AACAACAACAGCAGCAA-------------ACACACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-GCAACAGTCGGTGCTTAA--------------------------TT------------------------------------------------------TAACAGCTGAGCCAACGGCCAATAATTATTACAGCAA-------------------------CAA------------TAGCA------ACAGCAGCAGTAACAAT----------------ATCAACA------------------------ACA----------A-CAATAGCAACA----------------GTAACAACAACA----------------------A---------TTCAAT------GAGCT---------TCA-----------------------ATA---CGGAACTGTTTACGGATC-AGTATG-------------------------------ATG
droGri2 scaffold_15110:14489110-14489355 + ACAACAGCAACAACAACAGAA-------------------------ACA-----GAACTAAA--------CA---ACA-------------------------------------------------ATAGCTGAGGT-----------A----------------------------------AGGAGCAGAAGT----------------------CCTGGCG-------------------------------------------------ATGCA------------ATTGAAAGCGCCAAAGA-GCA---------------------------------------G---GAATATGGCCAGT---------------CTGAAAGATGATGAAACGGCAGCGAACAATCGACAAAG----------------CA-ACAACAATAA-----C-----------------------------------------------------------------------------------------------------------AACAACAACAATAGCA-------------ATGCTAGCAC-------------------------------------------CAGCGGCAACAAC---------------------------AACAACAATA----------A-TAATAACAATA----------------G----------------------------------------------CAACAATAATAATA---------ATA------------------------------------------------ATAATA-------------------------------ATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GCAACAGCAGCAACAGCAGCA-------------------------ACA-----TCAATAGAT------G---------------------------------------------------TTGC-AGATGCAACATC----------------------------------------------AGAAGCAGCAGCA-------ACATC------------GG----------------------------------------------------------------------------------------------------------TGGATAACAACTGCCTGTGCGAGAGATCTTCAGG---AGTTAGTGGAGGAGGTACTGGAGGATTACAAAATGGT----CACAATGGGCAACACAACAACAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACA----------------ACAAC---------------------------AACAATCATG----------G-CAGTGGCAACA----------------ACAACAACAATA-------------------------------GTCACTCGAATGATGATG---------AAC------------------------------------------------GAAATG-------------------------------ATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................AATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACA----------------ACAAC---------------------------AACA..............................................................................................................................................................................................................22200.051010000
droBip1
-CAGCGGCAGCAGCAACATCT-------------------------GTA-----GATG---------------------------------------------------------------TTGC-AGATGCAACATCAGCAGCAGCAGC----------------------------------AGGAGCAGGAGCA-------ACATC------------GG----------------------------------------------------------------------------------------------------------TGGATAATAACTGCCTTTGCGAGAGATCATCTGG---AGTTAGTGGCGGTAATGGAGGAGGATTATTAAATGGT----CACAATGGGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA------------CAACA------ACAACAATCATAGCAGT------------------------------------------------------------------AACAACA----------------ACAACAACAATA-------------------------------GTCATTCA---AATGATG---------ACA------------------------------------------------ACAACA-------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droKik1
GCAGCAGCAGCAGCAACGACA-------------------------GCA-----GCAACAGCA------GCA---------------------------------------------------GC-AGCAGCAACAGC----------------------------------------------AGCAGCAGCAGCA-------ACAACAAAGAGTAACCCAGCA-------------------------------------------------GCGTAA---T---AACCACCGAAATCACCACCGACGTC---------------------------------------G---TCATCTGGCGGAT---------------ATGGATGATGATGAAGATGAGGAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT------------C----AGCAAAGGCAGCAAGTTTTGCAACAGCAACAACAACA---ACAGCA----------------------------------------------------------------------------------GCAACATCATC----ATC---------ACC------------------------------------------------ACAATC-------------------------------ATCSizeHit CountTotal NormTotal
No Reads
droFic1
ACACCAGCAGCAGCAGCAGCA-------------------------GCA-----AAACCAGCA------GCA---------------------------------------------------GC-AGCATCAGCACC------AGCACCAGCAGCAACATCAGTTGCT----------------------GCAGCA-------ACAAC------------AA------------------------------------------------------------------CA------------------------------------GA-------------------------------------------------------------------------------------------------------CA--GCA-ACAACGACCA-----CAACGAAGCGGCGAAATGCT--------GAG------------------------------------------------------T-----------CCTCTGCC------AACAATAACAACA-------------ATTCCAGCAC-------------------------------------------AAACAACAACAAC---------------------------AATAACACCA----------C-AACGAATAACA----------------AC-----------------AACAACA--------AT-A-----CGACAACGAACAACAACA---------ACA------------------------------------------------CAAATA-------------------------------ATASizeHit CountTotal NormTotal
No Reads
droEle1
GCAGCAGCAGCAATCGCAGCA-------------------------GCCGACTGTCAATGGCA------GCG----------------------------------------------------------GCAGCGCCAGCAGCAGCACC----------------------------------AACAACAATAACA-------ACAACTCCA---------------------------------------TGCTACCGCCCGCTGTCCAGCAGAACAACAAC---AACAA-------------CAACGAA-----------------------------------------------------------------------------------------------------------------AATAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCAGCAGCAGCAAC----------------ACGAACA------------------------GCAGCAATAGC-AG-C------AACA----------------AC---AGCAACA-----------ATGCGAATGCG-----GGCAGCAATAACAACAATAATAACAATAATAATA---T------CAAC----------------------------------TATATG-------------------------------GCTSizeHit CountTotal NormTotal
No Reads
droRho1
ACAACAGCAGCAGCAGCAGCA-------------------------ACA-----CCAGCAACA------GCA---------------------------------------------------AC-AGCAGCAACATC----------------------------------------------------AGCAGCAGCAACAC-------------ACACCGAATACGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-----CATCGAG---------TGCG--------GGATCTTCGGCTACGATGACCAGCCAGGTGATGTCGCCGCAGAGTCCGCTGGGCAGCT-----------CCTCCGCTGGCAATCAGGCTAACAA-------------------------CAA------------TAACA------ACAACAATAATAGTAGC----------------ACCAACA------------------------AC--------------A------------------AT----------AATAA--CAAC---AATAAT-----------------------------AATGAGG---------AGC------------------------------------------------AAGTTA-------------------------------AACSizeHit CountTotal NormTotal
No Reads
droBia1
GCAACAACAGCCACAGCAACAACGGGAATGGTTTGAACAA------AAA-----ACAACAGCA------ACAGCAACA------------------------------------ACGGGAGTAAT-ATGAAC------------AGTACC----------------------------------AACAGCGACAGCA-------ACAAC------------AGTATG------------------------------------------------AACACTAAC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAA-----CAACAG--------------TATGAACA------------------------------------------------------------------------------CTAACAACAGCAACAACA-------------GTATGAACAC-------------------------------------------TAACAACAGCAAC---------------------------AACAGTAAGA----------A-CACTAACAACA----------------GCAACAACAGCA-------------------------------TGAACACTAACAACAGCA---------ACA-------------------------------------------------ACAGT-------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droTak1
TTAAACGCCTCCAAAGCAGCA-------------------------GCA-----GCAACAGA---------------------------------------------------------TGTTGCTGGTGGCAATAGC------AATACA----------------------------------AACAGCAACAGCAACAGCAA-------------ACCCAGTACAAGCTCACGAGATAAACTAAGCGAATTGCCGTTGCCCGCTGTTGACAA---------C---AACCA-------------CCACATC-----------------------------------------------------------------------------------------------------------------ATCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAACAACAATAAT----------------ACAAATA------------------------ATAATAATAAT--------AATAGCA----------------AC---AA--------C---AACAACA--------ACCACCACAGTGATAATAGTATTAGTG---------AGA------------------------------------------------ATAATT-------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droEug1
TTAACAGCCTCCAAAGCAGCA-------------------------GCA-----GCAACAGA---------------------------------------------------------TGTTACTAGCAGCAACATC----------------------------------------------AACAGCAACAACAACAGCAA-------------ACCCAGTACAAGTACAAGAGATAAACTAAGTGAGTTGCCGCTGCCGACTGCTGACAA---------C---ACCAA-------------CCACATC-----------------------------------------------------------------------------------------------------------------ATCAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAACAACAAT----------------ACAAATA------------------------AT--------------AATAAT---------------------------------------AACAACA--------ACCACCACAGTGATAATAGTATTAGTG---------AGA------------------------------------------------ATAATT-------------------------------ATGSizeHit CountTotal NormTotal
No Reads
dm3
GCAGCAGCAGCAGATTATACC-------------------ACAACAGCA-----GCAACAGCA------GAG------------------------------------------------GATGC-AAATGCAGCAGCAGCCGCAGC---------------------AGATTGT-----TGTT-----AACCAGCA-------AATACTCAGTGATCCACAGCGCT------------------------------------------------TGCAG---TACCTACA----------------ACAACAGCAGTTAATGCAAA--------------------------------------------------------------------------------------------------AACAGCA------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGCA----------------------------------------GCA------ACAACAGCAACA----------------AC------------------------AACA---ACAGCA----------G-CAGCAGCAGCA----------------ACAACAACAACA-------------------------------GCTAGTG------GGACA---------ACA---------------------------------------------------ACA---------------------------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA----------G-CAGCAGCAGCA----------------ACAACAACA........................................................................................................................................................27180.1730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA----------G-CAGCAGCAGCA----------------ACA..............................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCA----------G-CAGCAGCAGCA----------------.................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA----------------AC------------------------AACA---ACAGCA----------G-CA..........................................................................................................................................................................................2570.1410000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA----------------AC------------------------AACA---ACAGCA----------G-............................................................................................................................................................................................2480.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA----------------AC------------------------AACA---ACAGCA----------..............................................................................................................................................................................................2390.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA----------------AC------------------------AACA---ACAGCA----------G-CAGCA.......................................................................................................................................................................................24180.1120000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGCA----------------------------------------GCA------ACAACAGCAAC................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------GCA------ACAACAGCAACA----------------AC------------------------AACA---..............................................................................................................................................................................................................22100.1010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA----------------------------------------GCA------ACAACAGCAA.................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGCA----------------------------------------GCA------ACAACAGCA..................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGCA----------------------------------------GCA------ACA........................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGCA----------------------------------------GCA------ACAACAGC...................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA----------------AC------------------------AACA---ACAGCA----------G-CAGCAG......................................................................................................................................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA----------------AC------------------------AACA---ACAGCA----------G-C...........................................................................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCA----------------------------------------GCA------ACAACAGCAACA----------------...............................................................................................................................................................................................................................................24110.0910000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA----------------AC------------------------AACA---ACAGCA----------G-............................................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------AC------------------------AACA---ACAGCA----------G-CAGCAGCAGCA----------------ACA..............................................................................................................................................................28110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------AC------------------------AACA---ACAGCA----------G-CAGCAGCAGCA----------------AC...............................................................................................................................................................27110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------------AC------------------------AACA---ACAGCA----------G-CAGCAGCAGCA----------------A................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA----------------AC------------------------AACA---ACAGCA----------G-CAGC........................................................................................................................................................................................25140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTAACAGCCTCTAAAGCGGCA-------------------------GCA-----ACAGCAGCA------GCA------------------------------------------ACAGATGCTGCTAGTGGCAAC----------------------------------------------------AGCAACAGCAGCAGCAA-------------ACCCAGCACGAGCACACGAGATAAGCTAGGCGAGGTGCCGCTGCCGACTGTTGACAGCAACCA----------------------------CATC-----------------------------------------------------------------------------------------------------------------ATCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAATAATAAT----AACAATAACAACACAAATA------------------------AT--------------AATAAC---------------------------------------AACAACA--------ACCACCACAGTGATAATAGTATTAGTG---------AGA------------------------------------------------ATAGTT-------------------------------ATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAATAGTATTAGTG---------AGA------------------------------------------------ATAGT...................................2511.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAATAATAAT----......................................................................................................................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................................................................................................................CTAGGCGAGGTGCCGCTGCCGACTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
................................................................................................................................................................................................................................................................GCTGCCGACTGTTGACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
......................................................................................................................................................................................................................................ACACGAGATAAGCTAGGCGAGGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
............AAAGCGGCA-------------------------GCA-----ACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100010000000000000
........................................................AGCAGCA------GCA------------------------------------------ACAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
....................................................................................................................................AAC----------------------------------------------------AGCAACAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
droSec2
GCACCAGCATCAGCAACTGCA-------------------------ACA-----GCAACAGAT------GCA---ACATTAACAGCCTCTAAAGCTGCAGCAACAGCAGCAGCAACAGATTCTGCTAGTGGCAAC----------------------------------------------------AGCAACAGCAGCAGCAA-------------ACCCAGCACAAGCACACGAGATAAGCTAGGCGAGGTGCCGCTGCCGACTGTTGACAGCAACCA----------------------------CATC-----------------------------------------------------------------------------------------------------------------ATCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAATAATAATAAT----AACAATAACAACACAAATA------------------------ATA-----------------A------------------------------------C---AACAACA--------ACC---------------------------------ACC------------------------------------------------ACAGTG-------------------------------ATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........ATCAGCAACTGCA-------------------------ACA-----GCAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..............................................................T------GCA---ACATTAACAGCCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................................................................................................................................................................................................................CACAAGCACACGAGATAAGCTAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
............................................................................CATTAACAGCCTCTAAAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................CTAGGCGAGGTGCCGCTGCCGACTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
.....................................................................................................................................................................................................................................CACACGAGATAAGCTAGGCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........CAGCAACTGCA-------------------------ACA-----GCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010010
droYak3
GCAACAGCAGCAGCAGCAGCA-------------------------ACA-----ACTCCAGG-----------------------------------------------------------CCAC-TGCTGCCATGTC-----------C----------------------------------GGTAGCGATAGCA------C-------------ACCTGA----------------------------------------------------------------------------------------------------------TGGATCGCC-CTCCAAGTCCTCCAAGTCGTCCA----AGT--------------------------------------------------------------------------------------CGTCGAAGCAGCGA-ATGCG--------GCG------------------------------------------------------TGCCA------------GCCGAGACCCGCAGCAACTGCA----------------------------------------GCA------GCAACAGCAACA-------------GCAGC---------------------------A---ACAGCA----------G-CA------------------GCATGCAG-----------CAAC---ATCAATA--------ACCAGCA--GCC--AGCGGAAGCAGGC---------AGA------------------------------------------------ATCAAA-------------------------------TTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................A-------------------------ACA-----ACTCCAGG-----------------------------------------------------------CCAC-TGCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..........CAGCAGCAGCA-------------------------ACA-----ACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACTGCA----------------------------------------GCA------GCAACAGC...................................................................................................................................................................................................................................................................2380.13101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA-------------GCAGC---------------------------A---ACAG..........................................................................................................................................................................................................20200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------GCAGC---------------------------A---ACAGCA----------G-C...........................................................................................................................................................................................18200.05100010000000
droEre2
ACAACAGCAGCACCAGCAGCA-------------------------ACA-----GCAGCAGCA------ACA-------------------------------------------------------GCAGCAACATCAGT---T---------------------GTTGC-------------AACAGCAGCAGCA-------GCAGC------------AA------------------------------------------------------------------CA------------------------------------GA-------------------------------------------------------------------------------------------------------CA--GCA-ACAACGACCA-----CAACGAAGCGGCGGAATGCT--------GAG------------------------------------------------------T-----------CCTCTGCCAGCAACAACAATAACAACA-------------ATACCAGCAC-------------------------------------------CACCAACAACAAC---------------------------AATACCAGCA----------A-TAACAACAACA----------------ACAACAACAACA-------------------------------GCACCAC------GAACA---------ACA------------------------------------------------ACAATA-------------------------------ATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........AGCACCAGCAGCA-------------------------ACA-----GCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110000100
...................CA-------------------------ACA-----GCAGCAGCA------ACA-------------------------------------------------------GCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010
.........................................................................................................................................................................................ACAGCAGCAGCA-------GCAGC------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000
.............................................................................................................................................................................................CAGCAGCA-------GCAGC------------AA------------------------------------------------------------------CA------------------------------------GA-------------------------------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
..........CACCAGCAGCA-------------------------ACA-----GCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
dp5
GCAACAGCAGCAGCAGAAGCA-------------------------GCC-----GCAGCAGCA------GCA------------------------------------------------GGTGC-AGCAGCAACATCAGC---AGCA------------------GCAGGTACAGCAGC----A------ACAGCA-------------------------G------------------------------------------------------------CAACAACA----------------GCAGCAGCAGCAACTGCAGC--------------------------------------------------------------------------------------------------AGCAGCA------------------------------------------------------------------------------------------------------------------------------------ACTGCAGCAGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---ACAGCA---GCAGCA-A-CATCA---GCA----------------GC----------------------------------------AGCAACATCAGCAACAGCAACAGCAACAACA---G------CAGCTGC----------------------------------AGCCCCCACCAAGACCCCCAATGACGCTCAGTGACATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....AGCAGCAGCAGAAGCA-------------------------GCC-----GCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
......................................................................................................................................................................................................................................................................................................................GCAGCAGCAACTGCAGC--------------------------------------------------------------------------------------------------AGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAACAGCAACAACA---G------CAGC..........................................................................2840.2510001000000
.....................................................................................................................................................................................................................................................................................................................................GC--------------------------------------------------------------------------------------------------AGCAGCA------------------------------------------------------------------------------------------------------------------------------------ACTGCAGCAGC................................................................................................................................................................................................................................................................................................................................2040.2510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CATCA---GCA----------------GC----------------------------------------AGCAACATCT.............................................................................................................21100.1010100000000
....................................................................................................................................................................................................A-------------------------G------------------------------------------------------------CAACAACA----------------GCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
..................................................................................................................................................................................................GCA-------------------------G------------------------------------------------------------CAACAACA----------------GCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------C----------------------------------AGCAGC---------------------------A---ACAGCA---GCA..................................................................................................................................................................................................20200.1020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGCAACAGCAACA...........................................................................................21130.0810100000000
....................................................................................................................................................................................................A-------------------------G------------------------------------------------------------CAACAACA----------------GCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAACAACA---G------C.............................................................................22200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---A.............................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................................................................................................................ACAACA----------------GCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000100000
...........................................................................................................................................................................................................................................................................................CAACAACA----------------GCAGCAGCAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---AC............................................................................................................................................................................................................20200.0510001000000
..............................................................................................................................................................................................................................G------------------------------------------------------------CAACAACA----------------GCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---------------------------A---ACAGCA---GCAGCA-A-CA..........................................................................................................................................................................................21200.0510000100000
...............................................................................................................................................................................................ACAGCA-------------------------G------------------------------------------------------------CAACAACA----------------GCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...................................................................................................................................................................................C----A------ACAGCA-------------------------G------------------------------------------------------------CAACAACA----------------GCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---ACAGCA---G....................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---ACAGCA---GCA..................................................................................................................................................................................................28200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---ACA...........................................................................................................................................................................................................19200.0510100000000
...............................................................................................................................................................................................ACAGCA-------------------------G------------------------------------------------------------CAACAACA----------------GCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG-------------------------CAA------------C----------------------------------AGCAGC---------------------------A---ACAGC.........................................................................................................................................................................................................23200.0510100000000
droPer2
GCAGCAGCAGCAGCAGCAGCA-------------------------GCA-----GTGAAAGAAATACCAACAGCAGCA-------------------------------------------------ACGGCAGAG------------------------------GTTGG-------------AACAGCGGCA-TAACA----GCAGCATAA-----C--AGAACC--------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------GCA-GCAGCG-------------------------------------GAG------------------------------------------------------CAGCAGCAG-----------------AGCAGCAGCTGCA----------GAG----------CAG----------------------------------------AGGCAAAAGCAGC---------------------------AGCAGCAGA-----------GCAGC----AGCAGCAGCATAAGCAAAAAG-----------CAGC-----------------------------------------A------GCAA---CAACAA------CAGCCGAACTTCAAAATCTCGG---------------CTAAACG-------------------------------AGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GCAACAACAACAACAGCAGCA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AACAACAGCAGC------AACAAC----------------------------------AACAGCAGCAGCA-------ACAAC------------AGCATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------TGGCAGCA------------------------------------------------------------------------------GCAACAACAGCAACATCA---------ACTG----------CAGCAGCAACAGCGAC---------------AGCAG------C----AACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------GC-----------------GA--------------------------CAACAACTGCAGCA---GCAA---CAACAACAGCAGCAACTTC---------------------------------AAC---------------------------------GASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------G................................................................................................................................................................23200.7014014000
....................................................................................................................................................AC----------------------------------AACAGCAGCAGCA-------ACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.20400040
.................................................................................................................................................................................................................................TC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------GC-----------------..............................................................................................................................................24200.15302010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCGAC---------------AGCAG------C----AAC...................................................................................................................................................................................................................................................2070.14101000
......................................................................................................................................................................................................................................................................................AACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------TGG.................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
......................................................................................................................................................................................................................................................................................AACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------TGGC................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
.................................................................................................................................................................................................................................TC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100010
...................CA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200011
...................CA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
.........................................................................................................................................C------AACAAC----------------------------------AACAGCAGCAGCA-------AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
..........CAACAGCAGCA-------------------------ACA-----ACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
.CAACAACAACAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10202000
...................CA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----AACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------G................................................................................................................................................................24200.10201010
.............................................................................................................................................................................................................CAAC------------AGCATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
.....................................................................................................................................................C----------------------------------AACAGCAGCAGCA-------ACAAC------------AGCATC------------------------------------------------AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
...................................................................................................................................................................................................CA-------ACAAC------------AGCATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08101000
...................................................................................................................................................................................................CA-------ACAAC------------AGCATC------------------------------------------------AGCAACAGC---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.07100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGCAGCA---GCAA---CAACAACA..................................................................................25150.07101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGAC---------------AGCAG------C----AAC...................................................................................................................................................................................................................................................18160.06100010
.............................................................................................................................................................................................................................AGCATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
.............................................................................................................................................................................................................CAAC------------AGCATC------------------------------------------------AGCAACAGC---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.06100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGAC---------------AGCAG------C----AACA..................................................................................................................................................................................................................................................18180.06100010
................................................................................................................................................................................................................................ATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.05101000
................................................................................................................................................................................................................................ATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
GCAACAACAACAACAGCAGCA-------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................CA-----ACAACAGCA------GCA---------------------------------------------------GC-AACAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCAGCA-------------------------------------------A-CAACA---ACA----------------GC-----------------..............................................................................................................................................21200.05101000
..............AGCAGCA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------G................................................................................................................................................................22200.05101000
......................................................ACAACAGCA------GCA---------------------------------------------------GC-AACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----AACAATGGCAGCA-------------------------------------------A-CAACA---ACA----------------GC-----------------..............................................................................................................................................25200.05101000
....................A-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
.....AACAACAACAGCAGCA-------------------------ACA-----ACAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.....................................................................................................................................................................................................................................................................................CAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------TGGC................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..........................................................CAGCA------GCA---------------------------------------------------GC-AACAACAGCAGC------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
........................................................................................................................................GC------AACAAC----------------------------------AACAGCAGCAGCA-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........AACAGCAGCA-------------------------ACA-----ACAACAGCA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
....................................................................................................................................AGCAGC------AACAAC----------------------------------AACAGCAGCAGCA-------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.....................................................................GCA---------------------------------------------------GC-AACAACAGCAGC------AAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.........................................................................................................................................C------AACAAC----------------------------------AACAGCAGCAGCA-------ACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
GCAACAACAACAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
........................................................................................................................................................................................AACAGCAGCAGCA-------ACAAC------------AGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................................................................................................................................................................................................CATC------------------------------------------------AGCAACAGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
........................................................................................................................................GC------AACAAC----------------------------------AACAGCAGCAGCA-------ACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.........................................................................................................................................................................................................................................................................................AGC---AACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----CAACAA--------------TGG.................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
........AACAACAGCAGCA-------------------------ACA-----ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
....................................................................................................................................................AC----------------------------------AACAGCAGCAGCA-------ACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
....................................................................................................................................................AC----------------------------------AACAGCAGCAGCA-------ACAAC------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.................................................................................................................................AACAGCAGC------AACAAC----------------------------------AACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
........................................................AACAGCA------GCA---------------------------------------------------GC-AACAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------C----AACAATGGCAGCA-------------------------------------------A-CAACA---....................................................................................................................................................................................25200.05101000
.................AGCA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
......................................................................................................................................CAGC------AACAAC----------------------------------AACAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.......CAACAACAGCAGCA-------------------------ACA-----ACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
..................GCA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..........CAACAGCAGCA-------------------------ACA-----ACAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..................................................................................................................................ACAGCAGC------AACAAC----------------------------------AACAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............GCAGCA-------------------------ACA-----ACAACAGCA------GCA---------------------------------------------------GC-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................................................................................................................................GCAGC------AACAAC----------------------------------AACAGCAGCAGCA-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................A-----ACAACAGCA------GCA---------------------------------------------------GC-AACAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
droVir3
GCAACAGCAACAACAGCAACA-------------------------ACA-----ACAACAGGT------TTG---------------------------------------------------GC-AGCTGCTTTGGC------AACT------------------------------------------------------------------------------------------------------------TTTGGCCGCTGTCA------------------------------------------------------------------------------CAAAACACA--------------------------------------------AA----CACAAA-------------------TCTTTCGAAT--------------GTCA-----------------------GAA------------------------------------------------------C-----------ATTTTGCA--------CA-GGTCAAGGATACGAACA-GGA----------CAG------------TAGCAACAACAACAACAACAACAAC------------------------------------------------------------------------AACAACAACAACAACATAGAA-----------TTGCGACGACGACA--------AG---T-------------------TG---------CTG------------------------------------------------ATGATG-------------------------------AGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------------AACAACAACAACAACATAGA.................................................................................................................................................................2190.111000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------------------------------AACAACAACAACAACATAG..................................................................................................................................................................21100.101001000000000000000000000000000000000000000000000000000000000000
.............CAGCAACA-------------------------ACA-----ACAACAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000000000000000000000000000000000000000000000000000000000000
droMoj3
GCAACAGCAGCAACAGCAACA-------------------------GCG-----ACAACAGCA------GCA---------------------------------------------------GC-AACACCAAC----------------------------------------------------AACAACAACAGCAGCAA-------------ACACACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-GCAACAGTCGGTGCTTAA--------------------------TT------------------------------------------------------TAACAGCTGAGCCAACGGCCAATAATTATTACAGCAA-------------------------CAA------------TAGCA------ACAGCAGCAGTAACAAT----------------ATCAACA------------------------ACA----------A-CAATAGCAACA----------------GTAACAACAACA----------------------A---------TTCAAT------GAGCT---------TCA-----------------------ATA---CGGAACTGTTTACGGATC-AGTATG-------------------------------ATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAA--------------------------TT------------------------------------------------------TAACAGCTGAGC.......................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................CAA-------------ACACACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-GCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATTATTACAGCAA-------------------------CAA------------TAGCA------...........................................................................................................................................................................................................................................................................2511.001000010
.......CAGCAACAGCAACA-------------------------GCG-----ACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131000010
.......................................................CAACAGCA------GCA---------------------------------------------------GC-AACACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
droGri2
ACAACAGCAACAACAACAGAA-------------------------ACA-----GAACTAAA--------CA---ACA-------------------------------------------------ATAGCTGAGGT-----------A----------------------------------AGGAGCAGAAGT----------------------CCTGGCG-------------------------------------------------ATGCA------------ATTGAAAGCGCCAAAGA-GCA---------------------------------------G---GAATATGGCCAGT---------------CTGAAAGATGATGAAACGGCAGCGAACAATCGACAAAG----------------CA-ACAACAATAA-----C-----------------------------------------------------------------------------------------------------------AACAACAACAATAGCA-------------ATGCTAGCAC-------------------------------------------CAGCGGCAACAAC---------------------------AACAACAATA----------A-TAATAACAATA----------------G----------------------------------------------CAACAATAATAATA---------ATA------------------------------------------------ATAATA-------------------------------ATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA-------------ATGCTAGCAC-------------------------------------------CAGCGGCAACA...............................................................................................................................................................................................................................................2511.00110

Generated: 05/17/2015 at 11:19 PM